F396126

General Info

Members Datasets Scaffolds Average Seq Length
301 219 602 246

Family's Representative Sequence

Representative Sequence 3300048904|Ga0496101_0370114|Ga0496101_0370114_312_1112
Length 266
Sequence VERLPASGIGWLLDRAFALKNVLIITGASRGIGAATARLAAGAGYLVCVNYRKNREAAECVVADVEAKGGSAIAVQADVSIESDVVRLFETADQRLGRLSALVNNAGILETQMRVESMDAGRLHRVLSTNVVGAFICAREAVKRLSTKHGGSGGAIVNVSSGAARLGSPGEYVDYAASKGALDTMTIGLAHEVAEEGIRVNGVRGGFIYTDIHASGGEPKRVDRVKAFVPMKRGGTAEEVARAILWLLSDDASYVTGSFIDVTGGR

Samples

Sample ID Description Type Environment
1 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
10 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
11 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
12 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
13 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
14 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
21 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
22 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
25 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
26 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
60 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
78 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
79 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
80 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
91 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
92 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
94 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
95 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
96 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
122 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
125 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
126 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
127 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
128 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
130 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
131 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
132 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
133 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
134 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
137 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
138 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
139 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
140 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
143 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
146 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
147 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
148 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
149 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
152 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
155 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
156 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
163 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
164 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
165 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
182 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
183 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
184 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
185 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
186 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
187 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
188 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
189 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
190 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
191 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
194 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
195 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
196 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
197 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
198 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
199 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
200 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
201 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
202 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
203 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
204 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
205 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
206 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
207 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
208 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
209 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
210 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
211 2818991436 Collimonas arenae 515 Isolate Unclassified
212 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
213 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
214 2855730933 Achromobacter sp. HZ28 Isolate Nodule
215 2855767633 Achromobacter sp. HZ34 Isolate Nodule
216 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
217 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
218 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
219 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.35
Metatranscriptomes 0
Isolates 4.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.95
Nodule 1.66
Rhizoplane 1.99
Rhizosphere 75.42
Stem 0
Stem Tuber 0
Unclassified 1.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496101_0370114 3300048904 Bacteria 1127
2 JGI25155J39150_1000262 3300002704 Bacteria 19706
3 JGI25156J39149_1000416 3300002705 Bacteria 26492
4 JGI25162J39368_1000091 3300002737 Bacteria 101521
5 JGI25154J39366_1000347 3300002738 Bacteria 26492
6 JGI25157J39369_1000616 3300002741 Bacteria 20273
7 JGI25151J46595_10001663 3300003187 Bacteria 14592
8 JGI25165J46597_1000172 3300003214 Bacteria 101521
9 Ga0055538_1000002 3300003751 Bacteria 999437
10 Ga0055538_1000063 3300003751 Bacteria 101521
11 Ga0055539_1000002 3300003752 Bacteria 999437
12 Ga0055539_1000096 3300003752 Bacteria 101521
13 Ga0055533_1000004 3300003756 Bacteria 999437
14 Ga0055533_1000107 3300003756 Bacteria 101521
15 Ga0055532_1000348 3300003758 Bacteria 24965
16 Ga0055525_1000002 3300003759 Bacteria 999437
17 Ga0055525_1000140 3300003759 Bacteria 101521
18 Ga0055541_1000043 3300003841 Bacteria 161703
19 Ga0055541_1000064 3300003841 Bacteria 101521
20 Ga0070676_10132619 3300005328 Bacteria 1577
21 Ga0070690_100002301 3300005330 Bacteria 10243
22 Ga0070690_100094619 3300005330 Bacteria 1972
23 Ga0070670_100473847 3300005331 Bacteria 1111
24 Ga0070677_10148256 3300005333 Bacteria 1089
25 Ga0070677_10152688 3300005333 Bacteria 1076
26 Ga0070677_10261323 3300005333 Bacteria 864
27 Ga0068869_100002820 3300005334 Bacteria 10533
28 Ga0070680_100136355 3300005336 Bacteria 2056
29 Ga0070682_100101139 3300005337 Bacteria 1903
30 Ga0070682_100348732 3300005337 Bacteria 1103
31 Ga0068868_100009885 3300005338 Bacteria 6890
32 Ga0070689_100010377 3300005340 Bacteria 6639
33 Ga0070691_10029399 3300005341 Bacteria 2570
34 Ga0070687_100074222 3300005343 Bacteria 1836
35 Ga0070661_100064882 3300005344 Bacteria 2683
36 Ga0070661_100641796 3300005344 Bacteria 861
37 Ga0070668_100260782 3300005347 Bacteria 1441
38 Ga0070659_100059386 3300005366 Bacteria 3020
39 Ga0070700_100111221 3300005441 Bacteria 1821
40 Ga0070694_100085086 3300005444 Bacteria 2207
41 Ga0070678_100027721 3300005456 Bacteria 3850
42 Ga0070678_100313492 3300005456 Bacteria 1337
43 Ga0070678_100366976 3300005456 Bacteria 1242
44 Ga0070681_10231193 3300005458 Bacteria 1764
45 Ga0068867_100075200 3300005459 Bacteria 2533
46 Ga0070685_10106571 3300005466 Bacteria 1720
47 Ga0070679_100155678 3300005530 Bacteria 2260
48 Ga0068853_100240742 3300005539 Bacteria 1658
49 Ga0070672_100193505 3300005543 Bacteria 1699
50 Ga0070686_100001098 3300005544 Bacteria 15588
51 Ga0070696_100012885 3300005546 Bacteria 5612
52 Ga0070693_100055609 3300005547 Bacteria 2280
53 Ga0070665_100049142 3300005548 Bacteria 4232
54 Ga0068855_100093811 3300005563 Bacteria 3461
55 Ga0070664_100184071 3300005564 Bacteria 1858
56 Ga0068856_100036410 3300005614 Bacteria 4825
57 Ga0068856_100141519 3300005614 Bacteria 2413
58 Ga0070702_100001946 3300005615 Bacteria 8688
59 Ga0068864_100891414 3300005618 Bacteria 878
60 Ga0068866_10000607 3300005718 Bacteria 16367
61 Ga0068861_100139867 3300005719 Bacteria 1975
62 Ga0068861_100209188 3300005719 Bacteria 1642
63 Ga0068863_100722103 3300005841 Bacteria 991
64 Ga0068860_100016590 3300005843 Bacteria 7183
65 Ga0068862_100427927 3300005844 Bacteria 1244
66 Ga0068862_100467287 3300005844 Bacteria 1192
67 Ga0075364_10114842 3300006051 Bacteria 1799
68 Ga0075367_10332768 3300006178 Bacteria 957
69 Ga0097621_100193669 3300006237 Bacteria 1761
70 Ga0068871_100018524 3300006358 Bacteria 5293
71 Ga0075428_100409110 3300006844 Bacteria 1454
72 Ga0075428_100535894 3300006844 Bacteria 1252
73 Ga0075431_100173224 3300006847 Bacteria 2217
74 Ga0068865_100001044 3300006881 Bacteria 15911
75 Ga0079104_1038753 3300006946 Bacteria 1127
76 Ga0105251_10145423 3300009011 Bacteria 1072
77 Ga0105240_10001420 3300009093 Bacteria 41051
78 Ga0105240_10042033 3300009093 Bacteria 5827
79 Ga0111539_10000357 3300009094 Bacteria 56214
80 Ga0111539_10181922 3300009094 Bacteria 2455
81 Ga0111539_10505404 3300009094 Bacteria 1408
82 Ga0105245_10003703 3300009098 Bacteria 13639
83 Ga0105243_10006432 3300009148 Bacteria 9079
84 Ga0105242_10004857 3300009176 Bacteria 10407
85 Ga0105248_10063774 3300009177 Bacteria 4136
86 Ga0105248_10160941 3300009177 Bacteria 2532
87 Ga0105248_10304417 3300009177 Bacteria 1795
88 Ga0105238_10202081 3300009551 Bacteria 1963
89 Ga0105238_10429502 3300009551 Bacteria 1317
90 Ga0105249_10040632 3300009553 Bacteria 4225
91 Ga0105249_10181994 3300009553 Bacteria 2045
92 Ga0105249_10750873 3300009553 Bacteria 1038
93 Ga0105246_10638498 3300011119 Bacteria 925
94 Ga0157369_10243468 3300013105 Bacteria 1878
95 Ga0157378_10003589 3300013297 Bacteria 13732
96 Ga0157375_10055810 3300013308 Bacteria 3896
97 Ga0163163_10044792 3300014325 Bacteria 4341
98 Ga0163163_10405121 3300014325 Bacteria 1422
99 Ga0157380_10111227 3300014326 Bacteria 2302
100 Ga0182008_10023977 3300014497 Bacteria 3109
101 Ga0157379_10022357 3300014968 Bacteria 5602
102 Ga0182007_10021875 3300015262 Bacteria 2264
103 Ga0182007_10029956 3300015262 Bacteria 1861
104 Ga0182005_1000532 3300015265 Bacteria 19277
105 Ga0209435_100021 3300025206 Bacteria 223961
106 Ga0209760_104135 3300025207 Bacteria 1255
107 Ga0209784_100002 3300025224 Bacteria 1753105
108 Ga0209784_100079 3300025224 Bacteria 136351
109 Ga0209566_100003 3300025225 Bacteria 1753105
110 Ga0209566_100093 3300025225 Bacteria 136351
111 Ga0209674_100004 3300025226 Bacteria 1753105
112 Ga0209674_100115 3300025226 Bacteria 136351
113 Ga0209672_102118 3300025228 Bacteria 5280
114 Ga0209147_100004 3300025229 Bacteria 1371850
115 Ga0209563_100006 3300025230 Bacteria 1753105
116 Ga0209563_100113 3300025230 Bacteria 136351
117 Ga0207427_100455 3300025231 Bacteria 22626
118 Ga0209437_100176 3300025233 Bacteria 136351
119 Ga0209258_100083 3300025242 Bacteria 246008
120 Ga0209646_1000074 3300025246 Bacteria 223961
121 Ga0209026_1000058 3300025250 Bacteria 228656
122 Ga0209677_100003 3300025253 Bacteria 1753105
123 Ga0209677_100072 3300025253 Bacteria 136351
124 Ga0209759_1000046 3300025256 Bacteria 230149
125 Ga0209233_1000183 3300025261 Bacteria 136351
126 Ga0209025_1000028 3300025294 Bacteria 490678
127 Ga0207682_10079878 3300025893 Bacteria 1400
128 Ga0207642_10025425 3300025899 Bacteria 2395
129 Ga0207695_10002909 3300025913 Bacteria 24753
130 Ga0207695_10119693 3300025913 Bacteria 2603
131 Ga0207660_10302371 3300025917 Bacteria 1274
132 Ga0207652_10175634 3300025921 Bacteria 1924
133 Ga0207694_10349098 3300025924 Bacteria 1224
134 Ga0207694_10452035 3300025924 Bacteria 1072
135 Ga0207659_10097079 3300025926 Bacteria 2213
136 Ga0207687_10086944 3300025927 Bacteria 2271
137 Ga0207644_10470778 3300025931 Bacteria 1034
138 Ga0207690_10062135 3300025932 Bacteria 2542
139 Ga0207686_10001495 3300025934 Bacteria 13176
140 Ga0207670_10024221 3300025936 Bacteria 3791
141 Ga0207704_10000765 3300025938 Bacteria 14166
142 Ga0207711_10498300 3300025941 Bacteria 1135
143 Ga0207689_10007328 3300025942 Bacteria 9677
144 Ga0207679_10076669 3300025945 Bacteria 2541
145 Ga0207667_10010548 3300025949 Bacteria 10795
146 Ga0207712_10299127 3300025961 Bacteria 1320
147 Ga0207677_10232334 3300026023 Bacteria 1486
148 Ga0207703_10113566 3300026035 Bacteria 2315
149 Ga0207702_10134069 3300026078 Bacteria 2232
150 Ga0207702_10184438 3300026078 Bacteria 1924
151 Ga0207702_10450279 3300026078 Bacteria 1249
152 Ga0207648_10004074 3300026089 Bacteria 15151
153 Ga0207675_100006718 3300026118 Bacteria 10877
154 Ga0207675_100070939 3300026118 Bacteria 3257
155 Ga0207675_100280045 3300026118 Bacteria 1620
156 Ga0207675_100445469 3300026118 Bacteria 1282
157 Ga0207683_10010918 3300026121 Bacteria 7747
158 Ga0207683_10264080 3300026121 Bacteria 1572
159 Ga0207683_10371422 3300026121 Bacteria 1314
160 Ga0207698_10034699 3300026142 Bacteria 3680
161 Ga0209281_1005738 3300027111 Bacteria 3369
162 Ga0207428_10009178 3300027907 Bacteria 8884
163 Ga0207428_10442765 3300027907 Bacteria 948
164 Ga0268264_10095357 3300028381 Bacteria 2574
165 Ga0268264_10250981 3300028381 Bacteria 1644
166 Ga0265327_10033561 3300031251 Bacteria 2858
167 Ga0307406_10253139 3300031901 Bacteria 1328
168 Ga0373934_0105788 3300035086 Bacteria 1139
169 Ga0373933_0467232 3300035724 Bacteria 826
170 Ga0373937_0069649 3300036401 Bacteria 3243
171 Ga0373937_0195101 3300036401 Bacteria 1903
172 Ga0373925_0075329 3300037068 Bacteria 2557
173 Ga0439462_0040393 3300042015 Bacteria 1244
174 Ga0439435_0054538 3300042436 Bacteria 1151
175 Ga0439444_0001132 3300042437 Bacteria 3343
176 Ga0439460_0016469 3300042461 Bacteria 1969
177 Ga0453683_0006429 3300044673 Bacteria 8064
178 Ga0451576_0135239 3300045051 Bacteria 2570
179 Ga0495592_0048790 3300046454 Bacteria 3148
180 Ga0495651_0001399 3300046462 Bacteria 18702
181 Ga0495653_0003995 3300046463 Bacteria 11910
182 Ga0495608_0025800 3300046511 Bacteria 4011
183 Ga0495608_0121931 3300046511 Bacteria 1671
184 Ga0495618_0029012 3300046514 Bacteria 3450
185 Ga0495628_0000440 3300046516 Bacteria 37864
186 Ga0495628_0012690 3300046516 Bacteria 7098
187 Ga0495628_0086030 3300046516 Bacteria 2438
188 Ga0495652_0020169 3300046529 Bacteria 5925
189 Ga0495652_0027542 3300046529 Bacteria 5005
190 Ga0495652_0038121 3300046529 Bacteria 4165
191 Ga0495652_0254419 3300046529 Bacteria 1300
192 Ga0495645_0011288 3300046543 Bacteria 6281
193 Ga0495645_0036538 3300046543 Bacteria 3580
194 Ga0495625_0000473 3300046660 Bacteria 60605
195 Ga0495635_0048634 3300046663 Bacteria 2923
196 Ga0495635_0183617 3300046663 Bacteria 1421
197 Ga0495657_0188334 3300046675 Bacteria 1262
198 Ga0495599_0001150 3300046678 Bacteria 14996
199 Ga0495623_0005979 3300046679 Bacteria 7925
200 Ga0495623_0297690 3300046679 Bacteria 892
201 Ga0495646_0003748 3300046680 Bacteria 9503
202 Ga0495646_0035750 3300046680 Bacteria 3080
203 Ga0495658_0047624 3300046683 Bacteria 2415
204 Ga0495669_0033057 3300046684 Bacteria 2276
205 Ga0495624_0017520 3300046690 Bacteria 4808
206 Ga0495624_0034804 3300046690 Bacteria 3255
207 Ga0495600_0005589 3300046809 Bacteria 7591
208 Ga0495604_0078038 3300047317 Bacteria 2486
209 Ga0495676_0247312 3300047321 Bacteria 1218
210 Ga0495602_0027552 3300048088 Bacteria 5458
211 Ga0495602_0178582 3300048088 Bacteria 1640
212 Ga0495602_0182092 3300048088 Bacteria 1619
213 Ga0495602_0231050 3300048088 Bacteria 1390
214 Ga0496104_0090514 3300048907 Bacteria 2924
215 Ga0496109_0001435 3300048912 Bacteria 19764
216 Ga0496111_0100247 3300048914 Bacteria 2127
217 Ga0496112_0230680 3300048915 Bacteria 1806
218 Ga0496113_0079911 3300048916 Bacteria 2504
219 Ga0496116_0010538 3300048919 Bacteria 7731
220 Ga0496118_0088408 3300048921 Bacteria 2143
221 Ga0496122_0001811 3300048925 Bacteria 32748
222 Ga0496123_0000180 3300048926 Bacteria 127726
223 Ga0496125_0004942 3300048928 Bacteria 15082
224 Ga0496125_0036963 3300048928 Bacteria 4253
225 Ga0501031_0179120 3300049568 Bacteria 1385
226 Ga0501032_0179050 3300049569 Bacteria 1388
227 Ga0501033_0120385 3300049570 Bacteria 1905
228 Ga0501033_0129161 3300049570 Unclassified 1831
229 Ga0501034_0145094 3300049571 Bacteria 2351
230 Ga0501034_0192443 3300049571 Unclassified 2001
231 Ga0501034_0298851 3300049571 Bacteria 1547
232 Ga0501034_0383204 3300049571 Bacteria 1331
233 Ga0501036_0058622 3300049572 Bacteria 3262
234 Ga0501036_0309450 3300049572 Bacteria 1321
235 Ga0501038_0011948 3300049574 Bacteria 7927
236 Ga0501038_0169525 3300049574 Bacteria 1768
237 Ga0501039_0051709 3300049575 Bacteria 3179
238 Ga0501039_0281130 3300049575 Bacteria 1308
239 Ga0501040_0332096 3300049576 Bacteria 1088
240 Ga0501042_0045273 3300049578 Bacteria 3136
241 Ga0501043_0281828 3300049579 Unclassified 1274
242 Ga0501043_0360091 3300049579 Bacteria 1104
243 Ga0501046_0003685 3300049580 Bacteria 14038
244 Ga0501046_0054358 3300049580 Unclassified 3150
245 Ga0501047_0004760 3300049581 Bacteria 12764
246 Ga0501047_0203888 3300049581 Bacteria 1838
247 Ga0501048_0052208 3300049582 Bacteria 2909
248 Ga0501048_0289077 3300049582 Unclassified 1166
249 Ga0501067_0100478 3300049583 Bacteria 1607
250 Ga0501069_0115624 3300049585 Bacteria 1530
251 Ga0501070_0000756 3300049586 Bacteria 29487
252 Ga0501072_0036881 3300049588 Bacteria 3834
253 Ga0501073_0003932 3300049589 Bacteria 11147
254 Ga0501074_0108123 3300049590 Bacteria 1990
255 Ga0501074_0221561 3300049590 Bacteria 1347
256 Ga0501075_0259406 3300049591 Bacteria 1325
257 Ga0501076_0008869 3300049592 Bacteria 7396
258 Ga0501076_0216344 3300049592 Bacteria 1566
259 Ga0501238_007963 3300049671 Bacteria 1386
260 Ga0501079_0213798 3300049741 Bacteria 1506
261 Ga0501080_0061527 3300049742 Bacteria 3495
262 Ga0501080_0116895 3300049742 Bacteria 2472
263 Ga0501080_0308362 3300049742 Bacteria 1435
264 Ga0501080_0419134 3300049742 Bacteria 1203
265 Ga0501035_0002705 3300049822 Bacteria 17235
266 Ga0501035_0263706 3300049822 Bacteria 1460
267 Ga0501044_0007729 3300049823 Bacteria 11823
268 Ga0501044_0025732 3300049823 Bacteria 6238
269 Ga0501044_0257929 3300049823 Bacteria 1682
270 Ga0501044_0665837 3300049823 Bacteria 929
271 Ga0501045_0412347 3300049824 Bacteria 1005
272 Ga0501045_0500924 3300049824 Bacteria 902
273 nmdc:mga00v17_273588_c1 3300050491 Bacteria 1096
274 nmdc:mga06r32_232275_c1 3300050510 Bacteria 1832
275 nmdc:mga08y16_1452_c1 3300050511 Bacteria 23732
276 nmdc:mga08y16_21306_c1 3300050511 Bacteria 6844
277 Ga0495601_0010484 3300053077 Bacteria 5517
278 Ga0495601_0100947 3300053077 Bacteria 1863
279 Ga0495619_0026275 3300053085 Bacteria 3745
280 Ga0495619_0089109 3300053085 Bacteria 2087
281 Ga0500646_0075290 3300053090 Bacteria 1020
282 Ga0500555_028202 3300053103 Bacteria 1600
283 Ga0500595_004363 3300053119 Bacteria 6364
284 Ga0500618_000385 3300053125 Bacteria 30497
285 Ga0500573_0051122 3300053140 Bacteria 2377
286 Ga0500574_004229 3300053141 Bacteria 2652
287 Ga0500619_000789 3300053154 Bacteria 5418
288 2511384153 2511231026 Bacteria 5225445
289 2521557752 2521172590 Bacteria 5047645
290 2550693715 2548876994 Bacteria 4904866
291 2553002870 2551306416 Bacteria 6152985
292 2687236092 2684623219 Bacteria 8442773
293 2819541283 2818991436 Bacteria 5376622
294 2819592165 2818991445 Bacteria 4955017
295 2819615113 2818991449 Bacteria 5518009
296 2855733666 2855730933 Bacteria 7047938
297 2855772117 2855767633 Bacteria 7049357
298 2881417697 2881412998 Bacteria 6492157
299 2910245696 2910245624 Bacteria 6935613
300 2919046214 2919046199 Bacteria 5567169
301 2923510962 2923510766 Bacteria 5926163
302 Ga0496101_0370114
303 JGI25155J39150_1000262
304 JGI25156J39149_1000416
305 JGI25162J39368_1000091
306 JGI25154J39366_1000347
307 JGI25157J39369_1000616
308 JGI25151J46595_10001663
309 JGI25165J46597_1000172
310 Ga0055538_1000002
311 Ga0055538_1000063
312 Ga0055539_1000002
313 Ga0055539_1000096
314 Ga0055533_1000004
315 Ga0055533_1000107
316 Ga0055532_1000348
317 Ga0055525_1000002
318 Ga0055525_1000140
319 Ga0055541_1000043
320 Ga0055541_1000064
321 Ga0070676_10132619
322 Ga0070690_100002301
323 Ga0070690_100094619
324 Ga0070670_100473847
325 Ga0070677_10148256
326 Ga0070677_10152688
327 Ga0070677_10261323
328 Ga0068869_100002820
329 Ga0070680_100136355
330 Ga0070682_100101139
331 Ga0070682_100348732
332 Ga0068868_100009885
333 Ga0070689_100010377
334 Ga0070691_10029399
335 Ga0070687_100074222
336 Ga0070661_100064882
337 Ga0070661_100641796
338 Ga0070668_100260782
339 Ga0070659_100059386
340 Ga0070700_100111221
341 Ga0070694_100085086
342 Ga0070678_100027721
343 Ga0070678_100313492
344 Ga0070678_100366976
345 Ga0070681_10231193
346 Ga0068867_100075200
347 Ga0070685_10106571
348 Ga0070679_100155678
349 Ga0068853_100240742
350 Ga0070672_100193505
351 Ga0070686_100001098
352 Ga0070696_100012885
353 Ga0070693_100055609
354 Ga0070665_100049142
355 Ga0068855_100093811
356 Ga0070664_100184071
357 Ga0068856_100036410
358 Ga0068856_100141519
359 Ga0070702_100001946
360 Ga0068864_100891414
361 Ga0068866_10000607
362 Ga0068861_100139867
363 Ga0068861_100209188
364 Ga0068863_100722103
365 Ga0068860_100016590
366 Ga0068862_100427927
367 Ga0068862_100467287
368 Ga0075364_10114842
369 Ga0075367_10332768
370 Ga0097621_100193669
371 Ga0068871_100018524
372 Ga0075428_100409110
373 Ga0075428_100535894
374 Ga0075431_100173224
375 Ga0068865_100001044
376 Ga0079104_1038753
377 Ga0105251_10145423
378 Ga0105240_10001420
379 Ga0105240_10042033
380 Ga0111539_10000357
381 Ga0111539_10181922
382 Ga0111539_10505404
383 Ga0105245_10003703
384 Ga0105243_10006432
385 Ga0105242_10004857
386 Ga0105248_10063774
387 Ga0105248_10160941
388 Ga0105248_10304417
389 Ga0105238_10202081
390 Ga0105238_10429502
391 Ga0105249_10040632
392 Ga0105249_10181994
393 Ga0105249_10750873
394 Ga0105246_10638498
395 Ga0157369_10243468
396 Ga0157378_10003589
397 Ga0157375_10055810
398 Ga0163163_10044792
399 Ga0163163_10405121
400 Ga0157380_10111227
401 Ga0182008_10023977
402 Ga0157379_10022357
403 Ga0182007_10021875
404 Ga0182007_10029956
405 Ga0182005_1000532
406 Ga0209435_100021
407 Ga0209760_104135
408 Ga0209784_100002
409 Ga0209784_100079
410 Ga0209566_100003
411 Ga0209566_100093
412 Ga0209674_100004
413 Ga0209674_100115
414 Ga0209672_102118
415 Ga0209147_100004
416 Ga0209563_100006
417 Ga0209563_100113
418 Ga0207427_100455
419 Ga0209437_100176
420 Ga0209258_100083
421 Ga0209646_1000074
422 Ga0209026_1000058
423 Ga0209677_100003
424 Ga0209677_100072
425 Ga0209759_1000046
426 Ga0209233_1000183
427 Ga0209025_1000028
428 Ga0207682_10079878
429 Ga0207642_10025425
430 Ga0207695_10002909
431 Ga0207695_10119693
432 Ga0207660_10302371
433 Ga0207652_10175634
434 Ga0207694_10349098
435 Ga0207694_10452035
436 Ga0207659_10097079
437 Ga0207687_10086944
438 Ga0207644_10470778
439 Ga0207690_10062135
440 Ga0207686_10001495
441 Ga0207670_10024221
442 Ga0207704_10000765
443 Ga0207711_10498300
444 Ga0207689_10007328
445 Ga0207679_10076669
446 Ga0207667_10010548
447 Ga0207712_10299127
448 Ga0207677_10232334
449 Ga0207703_10113566
450 Ga0207702_10134069
451 Ga0207702_10184438
452 Ga0207702_10450279
453 Ga0207648_10004074
454 Ga0207675_100006718
455 Ga0207675_100070939
456 Ga0207675_100280045
457 Ga0207675_100445469
458 Ga0207683_10010918
459 Ga0207683_10264080
460 Ga0207683_10371422
461 Ga0207698_10034699
462 Ga0209281_1005738
463 Ga0207428_10009178
464 Ga0207428_10442765
465 Ga0268264_10095357
466 Ga0268264_10250981
467 Ga0265327_10033561
468 Ga0307406_10253139
469 Ga0373934_0105788
470 Ga0373933_0467232
471 Ga0373937_0069649
472 Ga0373937_0195101
473 Ga0373925_0075329
474 Ga0439462_0040393
475 Ga0439435_0054538
476 Ga0439444_0001132
477 Ga0439460_0016469
478 Ga0453683_0006429
479 Ga0451576_0135239
480 Ga0495592_0048790
481 Ga0495651_0001399
482 Ga0495653_0003995
483 Ga0495608_0025800
484 Ga0495608_0121931
485 Ga0495618_0029012
486 Ga0495628_0000440
487 Ga0495628_0012690
488 Ga0495628_0086030
489 Ga0495652_0020169
490 Ga0495652_0027542
491 Ga0495652_0038121
492 Ga0495652_0254419
493 Ga0495645_0011288
494 Ga0495645_0036538
495 Ga0495625_0000473
496 Ga0495635_0048634
497 Ga0495635_0183617
498 Ga0495657_0188334
499 Ga0495599_0001150
500 Ga0495623_0005979
501 Ga0495623_0297690
502 Ga0495646_0003748
503 Ga0495646_0035750
504 Ga0495658_0047624
505 Ga0495669_0033057
506 Ga0495624_0017520
507 Ga0495624_0034804
508 Ga0495600_0005589
509 Ga0495604_0078038
510 Ga0495676_0247312
511 Ga0495602_0027552
512 Ga0495602_0178582
513 Ga0495602_0182092
514 Ga0495602_0231050
515 Ga0496104_0090514
516 Ga0496109_0001435
517 Ga0496111_0100247
518 Ga0496112_0230680
519 Ga0496113_0079911
520 Ga0496116_0010538
521 Ga0496118_0088408
522 Ga0496122_0001811
523 Ga0496123_0000180
524 Ga0496125_0004942
525 Ga0496125_0036963
526 Ga0501031_0179120
527 Ga0501032_0179050
528 Ga0501033_0120385
529 Ga0501033_0129161
530 Ga0501034_0145094
531 Ga0501034_0192443
532 Ga0501034_0298851
533 Ga0501034_0383204
534 Ga0501036_0058622
535 Ga0501036_0309450
536 Ga0501038_0011948
537 Ga0501038_0169525
538 Ga0501039_0051709
539 Ga0501039_0281130
540 Ga0501040_0332096
541 Ga0501042_0045273
542 Ga0501043_0281828
543 Ga0501043_0360091
544 Ga0501046_0003685
545 Ga0501046_0054358
546 Ga0501047_0004760
547 Ga0501047_0203888
548 Ga0501048_0052208
549 Ga0501048_0289077
550 Ga0501067_0100478
551 Ga0501069_0115624
552 Ga0501070_0000756
553 Ga0501072_0036881
554 Ga0501073_0003932
555 Ga0501074_0108123
556 Ga0501074_0221561
557 Ga0501075_0259406
558 Ga0501076_0008869
559 Ga0501076_0216344
560 Ga0501238_007963
561 Ga0501079_0213798
562 Ga0501080_0061527
563 Ga0501080_0116895
564 Ga0501080_0308362
565 Ga0501080_0419134
566 Ga0501035_0002705
567 Ga0501035_0263706
568 Ga0501044_0007729
569 Ga0501044_0025732
570 Ga0501044_0257929
571 Ga0501044_0665837
572 Ga0501045_0412347
573 Ga0501045_0500924
574 nmdc:mga00v17_273588_c1
575 nmdc:mga06r32_232275_c1
576 nmdc:mga08y16_1452_c1
577 nmdc:mga08y16_21306_c1
578 Ga0495601_0010484
579 Ga0495601_0100947
580 Ga0495619_0026275
581 Ga0495619_0089109
582 Ga0500646_0075290
583 Ga0500555_028202
584 Ga0500595_004363
585 Ga0500618_000385
586 Ga0500573_0051122
587 Ga0500574_004229
588 Ga0500619_000789
589 2511384153
590 2521557752
591 2550693715
592 2553002870
593 2687236092
594 2819541283
595 2819592165
596 2819615113
597 2855733666
598 2855772117
599 2881417697
600 2910245696
601 2919046214
602 2923510962

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

21

221

0.94

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

27

266

0.94

PF08659

KR

KR domain

21

208

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8bcj-assembly2.cif.gz_D crystal structure of short-chain dehydrogenase pa3128 from pseudomonas aeruginosa pao1 in complex with nadp+ 0.978 3 249
4iqg-assembly1.cif.gz_B crystal structure of bpro0239 oxidoreductase from polaromonas sp. js666 in nadp bound form 0.9771 4 249
8bci-assembly2.cif.gz_C crystal structure of short-chain dehydrogenase pa3128 from pseudomonas aeruginosa pao1 0.9752 3 249
8bci-assembly2.cif.gz_D crystal structure of short-chain dehydrogenase pa3128 from pseudomonas aeruginosa pao1 0.9739 3 249
4e3z-assembly1.cif.gz_B crystal structure of a oxidoreductase from rhizobium etli cfn 42 0.9731 4 249
ID Description Score Start End Superfamily
4jigA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.959 3 249 3.40.50.720
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9546 2 245 3.40.50.720
4hsyA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9534 2 245 3.40.50.720
4iinB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9465 3 245 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9459 4 78 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3D3R354-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9985 3 128
AF-A0A0B8PNC9-F1-model_v4 Putative oxidoreductase 0.9978 3 134
AF-A0A4U9UDC6-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC 1.1.1.100) 0.9931 3 137 GO:0004316
AF-A0A529VWF8-F1-model_v4 deleted 0.99 3 141
AF-A0A4V6JHX6-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC 1.1.1.100) 0.9889 4 134 GO:0004316

Map