F395662

General Info

Members Datasets Scaffolds Average Seq Length
300 218 600 357

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8023623736|8023630365
Length 401
Sequence SEGPGRGEEPSAVAPRELAAMRRALELARAEVGSTGSNPAVGCVLLDAEGTTVATGVHRGPGTPHAEVDALRRARGRHRGTTAVVTLEPCDHQGRTGPCSKALIEAGVRRVLYAVADPNRVAAGGARRLADAGVEVVGGVLGAEAEAVLEMWLTAVRAGRPFVTWKFAATLDGRSAAADGSARWISSAESRADAHELRARHDAVLVGSGTWRSDDPRLDLRHGVVGHPPLRIALDARGELPPDSRLLDGAAPTLVVTDPATGTAAHGESESNNNSGINTSTNTSTSRGANSGPDVLRLKTDARGHFPPLDLLAALDGRGVRSVLVEGGPALAASFVRAGLVDRVVAYVAPLLLGSEGVSATGPLGIGSIREAHRFRITSVDRIGPDLRIELRPPARTGGTQ

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
101 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
102 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
103 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
104 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
105 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
106 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
107 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
110 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
111 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
112 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
113 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
114 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
115 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
116 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
121 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
122 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
125 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
126 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
127 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
128 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
129 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
130 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
131 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
137 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
138 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
139 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
140 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
141 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
142 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
143 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
144 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
145 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
146 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
147 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
148 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
149 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
150 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
153 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
156 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
157 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
158 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
159 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
160 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
161 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
164 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
165 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
166 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
182 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
183 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
184 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
185 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
186 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
187 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
188 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
189 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
190 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
191 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
192 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
195 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
196 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
197 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
198 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
199 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
200 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
201 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
202 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
203 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
204 2558860280 Kutzneria sp. 744 Isolate Unclassified
205 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
206 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
207 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
208 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
209 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
210 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
211 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
212 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
213 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
214 2867475112 Streptomyces sp. TM32 Isolate Unclassified
215 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
216 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
217 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
218 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.33
Metatranscriptomes 1.33
Isolates 5.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.33
Nodule 0
Rhizoplane 8.67
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 0.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10184450 3300003320 Bacteria 1732
2 JGI25160J50197_1027972 3300003354 Bacteria 1524
3 Ga0070658_10012697 3300005327 Bacteria 6755
4 Ga0070658_10015743 3300005327 Bacteria 6047
5 Ga0070658_10060256 3300005327 Bacteria 3091
6 Ga0070683_100007790 3300005329 Bacteria 9069
7 Ga0070683_100015215 3300005329 Bacteria 6755
8 Ga0070683_100053807 3300005329 Bacteria 3731
9 Ga0070683_100215902 3300005329 Bacteria 1822
10 Ga0070670_100012699 3300005331 Bacteria 7210
11 Ga0070666_10002015 3300005335 Bacteria 12364
12 Ga0070680_100015004 3300005336 Bacteria 6064
13 Ga0070682_100002964 3300005337 Bacteria 9420
14 Ga0070682_100133191 3300005337 Bacteria 1685
15 Ga0070682_100156057 3300005337 Bacteria 1571
16 Ga0068868_100010174 3300005338 Bacteria 6798
17 Ga0070660_100177892 3300005339 Bacteria 1721
18 Ga0070689_100005462 3300005340 Bacteria 8683
19 Ga0070692_10123117 3300005345 Bacteria 1449
20 Ga0070675_100103374 3300005354 Bacteria 2402
21 Ga0070675_100168970 3300005354 Bacteria 1885
22 Ga0070671_100023375 3300005355 Bacteria 5059
23 Ga0070667_100011916 3300005367 Bacteria 7194
24 Ga0070694_100204547 3300005444 Bacteria 1473
25 Ga0070708_100200337 3300005445 Bacteria 1869
26 Ga0070663_100165756 3300005455 Bacteria 1704
27 Ga0070681_10130445 3300005458 Bacteria 2446
28 Ga0070685_10035952 3300005466 Bacteria 2798
29 Ga0070707_100036094 3300005468 Bacteria 4716
30 Ga0070679_100113756 3300005530 Bacteria 2691
31 Ga0070679_100295560 3300005530 Bacteria 1571
32 Ga0070684_100002606 3300005535 Bacteria 13316
33 Ga0070684_100100585 3300005535 Bacteria 2582
34 Ga0070686_100010235 3300005544 Bacteria 5280
35 Ga0070696_100004981 3300005546 Bacteria 8871
36 Ga0070693_100159389 3300005547 Bacteria 1436
37 Ga0070665_100051119 3300005548 Bacteria 4146
38 Ga0068855_100453411 3300005563 Bacteria 1399
39 Ga0070664_100000439 3300005564 Bacteria 31278
40 Ga0070664_100380624 3300005564 Bacteria 1288
41 Ga0068857_100007505 3300005577 Bacteria 9382
42 Ga0068856_100148901 3300005614 Bacteria 2349
43 Ga0070702_100059872 3300005615 Bacteria 2212
44 Ga0068852_100029608 3300005616 Bacteria 4500
45 Ga0068859_100008953 3300005617 Bacteria 10110
46 Ga0068864_100039568 3300005618 Bacteria 4030
47 Ga0068864_100262671 3300005618 Bacteria 1606
48 Ga0068866_10088847 3300005718 Bacteria 1678
49 Ga0068861_100411877 3300005719 Bacteria 1202
50 Ga0068863_100001769 3300005841 Bacteria 21417
51 Ga0068858_100004840 3300005842 Bacteria 13199
52 Ga0068858_100078100 3300005842 Bacteria 3076
53 Ga0068860_100005003 3300005843 Bacteria 13499
54 Ga0068860_100047755 3300005843 Bacteria 4080
55 Ga0068860_100073114 3300005843 Bacteria 3259
56 Ga0081539_10072294 3300005985 Bacteria 1844
57 Ga0075365_10207339 3300006038 Bacteria 1374
58 Ga0075364_10021762 3300006051 Bacteria 4042
59 Ga0097621_100085520 3300006237 Bacteria 2630
60 Ga0097621_100130652 3300006237 Bacteria 2138
61 Ga0068871_100005524 3300006358 Bacteria 8866
62 Ga0075428_100026586 3300006844 Bacteria 6406
63 Ga0075433_10007403 3300006852 Bacteria 8713
64 Ga0075429_100028486 3300006880 Bacteria 4849
65 Ga0068865_100010528 3300006881 Bacteria 5759
66 Ga0097620_100008953 3300006931 Bacteria 10110
67 Ga0105245_10003498 3300009098 Bacteria 14055
68 Ga0105245_10006303 3300009098 Bacteria 10444
69 Ga0105247_10002861 3300009101 Bacteria 11507
70 Ga0114129_10050644 3300009147 Bacteria 5833
71 Ga0105241_10195400 3300009174 Bacteria 1687
72 Ga0105238_10034354 3300009551 Bacteria 5159
73 Ga0105238_10057804 3300009551 Bacteria 3888
74 Ga0105249_10014389 3300009553 Bacteria 6996
75 Ga0105239_10000854 3300010375 Bacteria 43307
76 Ga0105239_10030988 3300010375 Bacteria 5884
77 Ga0105246_10000321 3300011119 Bacteria 25383
78 Ga0105246_10001583 3300011119 Bacteria 13544
79 Ga0157369_10072125 3300013105 Bacteria 3706
80 Ga0163162_10014757 3300013306 Bacteria 7634
81 Ga0157372_10010217 3300013307 Bacteria 9965
82 Ga0157372_10021342 3300013307 Bacteria 6997
83 Ga0157375_10164515 3300013308 Bacteria 2362
84 Ga0157375_10215080 3300013308 Bacteria 2080
85 Ga0157375_10266653 3300013308 Bacteria 1874
86 Ga0163163_10000918 3300014325 Bacteria 24980
87 Ga0163163_10227709 3300014325 Bacteria 1913
88 Ga0182008_10066663 3300014497 Bacteria 1772
89 Ga0157379_10085608 3300014968 Bacteria 2825
90 Ga0157376_10416148 3300014969 Bacteria 1303
91 Ga0206354_10231075 3300020081 Bacteria 5024
92 Ga0206353_10167444 3300020082 Bacteria 1926
93 Ga0206353_11029603 3300020082 Bacteria 19172
94 Ga0206353_11782370 3300020082 Bacteria 11269
95 Ga0213876_10008518 3300021384 Bacteria 5551
96 Ga0207426_1006832 3300025302 Bacteria 4878
97 Ga0207710_10068597 3300025900 Bacteria 1622
98 Ga0207680_10081611 3300025903 Bacteria 2033
99 Ga0207705_10002849 3300025909 Bacteria 13227
100 Ga0207707_10001139 3300025912 Bacteria 25193
101 Ga0207660_10242631 3300025917 Bacteria 1420
102 Ga0207657_10011446 3300025919 Bacteria 8809
103 Ga0207649_10136435 3300025920 Bacteria 1673
104 Ga0207652_10000651 3300025921 Bacteria 34132
105 Ga0207646_10034080 3300025922 Bacteria 4602
106 Ga0207694_10042749 3300025924 Bacteria 3496
107 Ga0207687_10060754 3300025927 Bacteria 2667
108 Ga0207687_10177858 3300025927 Bacteria 1646
109 Ga0207664_10014482 3300025929 Bacteria 5696
110 Ga0207644_10012598 3300025931 Bacteria 5620
111 Ga0207686_10184539 3300025934 Bacteria 1482
112 Ga0207686_10363474 3300025934 Bacteria 1093
113 Ga0207709_10026973 3300025935 Bacteria 3304
114 Ga0207670_10063673 3300025936 Bacteria 2524
115 Ga0207711_10018885 3300025941 Bacteria 5732
116 Ga0207661_10005367 3300025944 Bacteria 9032
117 Ga0207679_10072505 3300025945 Bacteria 2601
118 Ga0207667_10325111 3300025949 Bacteria 1570
119 Ga0207658_10032510 3300025986 Bacteria 3713
120 Ga0207677_10018613 3300026023 Bacteria 4172
121 Ga0207703_10040313 3300026035 Bacteria 3737
122 Ga0207702_10069091 3300026078 Bacteria 3036
123 Ga0207702_10183348 3300026078 Bacteria 1929
124 Ga0207641_10028651 3300026088 Bacteria 4602
125 Ga0207676_10031569 3300026095 Bacteria 3984
126 Ga0207676_10186962 3300026095 Bacteria 1819
127 Ga0207674_10012449 3300026116 Bacteria 9507
128 Ga0207698_10022412 3300026142 Bacteria 4388
129 Ga0268266_10028609 3300028379 Bacteria 4736
130 Ga0265338_10244705 3300028800 Bacteria 1326
131 Ga0265328_10045002 3300031239 Bacteria 1623
132 Ga0265320_10001908 3300031240 Bacteria 14722
133 Ga0265320_10013098 3300031240 Bacteria 4784
134 Ga0265339_10008441 3300031249 Bacteria 6554
135 Ga0265339_10021301 3300031249 Bacteria 3773
136 Ga0307508_10035526 3300031616 Bacteria 4491
137 Ga0307514_10059318 3300031649 Bacteria 2924
138 Ga0316575_10004203 3300031665 Bacteria 5052
139 Ga0316579_10002232 3300031691 Bacteria 7298
140 Ga0265314_10003795 3300031711 Bacteria 14431
141 Ga0265314_10010101 3300031711 Bacteria 7911
142 Ga0265342_10000079 3300031712 Bacteria 104996
143 Ga0265342_10002293 3300031712 Bacteria 16653
144 Ga0316576_10007072 3300031727 Bacteria 7030
145 Ga0316578_10018131 3300031728 Bacteria 3848
146 Ga0316577_10003582 3300031733 Bacteria 7867
147 Ga0316583_10005810 3300032133 Bacteria 4437
148 Ga0316585_10002697 3300032137 Bacteria 4816
149 Ga0316580_10004095 3300032139 Bacteria 4201
150 Ga0373938_0009168 3300034957 Bacteria 1786
151 Ga0373955_0099578 3300035172 Bacteria 1666
152 Ga0316574_0077135 3300035398 Bacteria 2111
153 Ga0373937_0006319 3300036401 Bacteria 10215
154 Ga0373937_0109628 3300036401 Bacteria 2567
155 Ga0373937_0181205 3300036401 Bacteria 1978
156 Ga0316582_0021690 3300036647 Bacteria 3800
157 Ga0316584_0032488 3300036712 Bacteria 3863
158 Ga0395898_0043213 3300037466 Bacteria 4441
159 Ga0436365_0153626 3300039437 Bacteria 31746
160 Ga0436362_0175941 3300039453 Bacteria 2636
161 Ga0466969_0001843 3300044656 Bacteria 11335
162 Ga0466972_0117251 3300044658 Bacteria 1256
163 Ga0466965_0002652 3300044683 Bacteria 7664
164 Ga0466965_0098932 3300044683 Bacteria 1490
165 Ga0466961_0055280 3300044693 Bacteria 2531
166 Ga0466961_0056038 3300044693 Bacteria 2511
167 Ga0466963_0176143 3300044694 Bacteria 1492
168 Ga0466964_0022735 3300044706 Bacteria 2435
169 Ga0466964_0025569 3300044706 Bacteria 2306
170 Ga0466971_0001759 3300044719 Bacteria 9191
171 Ga0466971_0002023 3300044719 Bacteria 8582
172 Ga0466971_0018942 3300044719 Bacteria 3053
173 Ga0466970_0008174 3300044765 Bacteria 5254
174 Ga0466957_0049125 3300044842 Bacteria 2564
175 Ga0466960_0104827 3300044901 Bacteria 1461
176 Ga0466959_0015725 3300045049 Bacteria 5518
177 Ga0466959_0110874 3300045049 Bacteria 1958
178 Ga0451576_0091689 3300045051 Bacteria 3161
179 Ga0466958_0006224 3300045836 Bacteria 6479
180 Ga0466967_0008799 3300045976 Bacteria 7439
181 Ga0466967_0105603 3300045976 Bacteria 2580
182 Ga0466967_0169808 3300045976 Bacteria 2051
183 Ga0495627_044339 3300046453 Bacteria 1358
184 Ga0495603_0135257 3300046455 Bacteria 1435
185 Ga0495641_0080146 3300046461 Bacteria 1463
186 Ga0495605_0104759 3300046474 Unclassified 1296
187 Ga0495644_0022086 3300046523 Bacteria 2426
188 Ga0495598_0016074 3300046537 Bacteria 1902
189 Ga0495656_0001772 3300046615 Bacteria 7089
190 Ga0495659_0011099 3300046664 Bacteria 2902
191 Ga0495670_0026768 3300046691 Bacteria 2855
192 Ga0495581_0131749 3300047315 Bacteria 1457
193 Ga0495636_0032375 3300047318 Bacteria 2145
194 Ga0496101_0068374 3300048904 Bacteria 2597
195 Ga0496102_0004167 3300048905 Bacteria 12236
196 Ga0496103_0022769 3300048906 Bacteria 3774
197 Ga0496104_0398947 3300048907 Bacteria 1288
198 Ga0496106_0096102 3300048909 Bacteria 2292
199 Ga0496107_0058579 3300048910 Bacteria 2785
200 Ga0496107_0117892 3300048910 Bacteria 1955
201 Ga0496108_0134362 3300048911 Bacteria 2127
202 Ga0496108_0141619 3300048911 Bacteria 2072
203 Ga0496108_0271473 3300048911 Bacteria 1476
204 Ga0496108_0279605 3300048911 Bacteria 1453
205 Ga0496109_0016934 3300048912 Bacteria 6380
206 Ga0496109_0020053 3300048912 Bacteria 5905
207 Ga0496109_0031853 3300048912 Bacteria 4736
208 Ga0496109_0045400 3300048912 Bacteria 3987
209 Ga0496109_0204151 3300048912 Bacteria 1858
210 Ga0496111_0086769 3300048914 Bacteria 2290
211 Ga0496112_0117181 3300048915 Bacteria 2633
212 Ga0496113_0168050 3300048916 Bacteria 1736
213 Ga0496114_0007444 3300048917 Bacteria 8657
214 Ga0496114_0144296 3300048917 Bacteria 2063
215 Ga0496114_0180304 3300048917 Bacteria 1844
216 Ga0496114_0303800 3300048917 Bacteria 1409
217 Ga0496115_0009937 3300048918 Bacteria 7089
218 Ga0496115_0068303 3300048918 Bacteria 2877
219 Ga0496115_0128752 3300048918 Bacteria 2086
220 Ga0496118_0019944 3300048921 Bacteria 5966
221 Ga0496122_0000899 3300048925 Bacteria 54992
222 Ga0496125_0000025 3300048928 Bacteria 440074
223 Ga0501031_0037513 3300049568 Bacteria 3162
224 Ga0501031_0081159 3300049568 Bacteria 2114
225 Ga0501032_0009910 3300049569 Bacteria 6883
226 Ga0501033_0006989 3300049570 Bacteria 8811
227 Ga0501033_0062341 3300049570 Bacteria 2745
228 Ga0501034_0045818 3300049571 Bacteria 4418
229 Ga0501034_0161580 3300049571 Bacteria 2210
230 Ga0501034_0423747 3300049571 Bacteria 1252
231 Ga0501036_0004918 3300049572 Bacteria 10794
232 Ga0501036_0011295 3300049572 Bacteria 7388
233 Ga0501037_0021877 3300049573 Bacteria 4733
234 Ga0501038_0006565 3300049574 Bacteria 10761
235 Ga0501039_0006003 3300049575 Bacteria 9210
236 Ga0501040_0117020 3300049576 Bacteria 1868
237 Ga0501040_0207767 3300049576 Bacteria 1391
238 Ga0501042_0008859 3300049578 Bacteria 6671
239 Ga0501043_0007999 3300049579 Bacteria 8345
240 Ga0501043_0023498 3300049579 Bacteria 4835
241 Ga0501043_0045799 3300049579 Bacteria 3439
242 Ga0501046_0001157 3300049580 Bacteria 25667
243 Ga0501046_0039058 3300049580 Bacteria 3804
244 Ga0501046_0196632 3300049580 Bacteria 1502
245 Ga0501047_0146836 3300049581 Bacteria 2235
246 Ga0501048_0018719 3300049582 Bacteria 5090
247 Ga0501067_0001727 3300049583 Bacteria 12003
248 Ga0501067_0036530 3300049583 Bacteria 2727
249 Ga0501068_0064388 3300049584 Bacteria 2231
250 Ga0501068_0084766 3300049584 Bacteria 1949
251 Ga0501069_0002444 3300049585 Bacteria 9470
252 Ga0501070_0005938 3300049586 Bacteria 10406
253 Ga0501070_0013052 3300049586 Bacteria 7001
254 Ga0501070_0017927 3300049586 Bacteria 5944
255 Ga0501070_0076778 3300049586 Bacteria 2765
256 Ga0501070_0161933 3300049586 Bacteria 1844
257 Ga0501070_0411090 3300049586 Bacteria 1093
258 Ga0501071_0019149 3300049587 Bacteria 4749
259 Ga0501071_0300690 3300049587 Bacteria 1216
260 Ga0501072_0077480 3300049588 Bacteria 2632
261 Ga0501072_0170576 3300049588 Bacteria 1736
262 Ga0501073_0017121 3300049589 Bacteria 5249
263 Ga0501073_0045087 3300049589 Bacteria 3106
264 Ga0501073_0215577 3300049589 Bacteria 1326
265 Ga0501074_0029015 3300049590 Bacteria 4008
266 Ga0501074_0047667 3300049590 Bacteria 3096
267 Ga0501077_0024168 3300049593 Bacteria 3857
268 Ga0501079_0018510 3300049741 Bacteria 5322
269 Ga0501080_0076789 3300049742 Bacteria 3106
270 Ga0501080_0231055 3300049742 Bacteria 1691
271 Ga0501083_0021277 3300049744 Bacteria 4506
272 Ga0501035_0188141 3300049822 Bacteria 1776
273 Ga0501044_0073092 3300049823 Bacteria 3485
274 Ga0501045_0058998 3300049824 Bacteria 2811
275 Ga0501045_0091409 3300049824 Bacteria 2250
276 nmdc:mga03683_7351_c1 3300050489 Bacteria 3821
277 nmdc:mga0yw44_89883_c1 3300050492 Bacteria 1939
278 nmdc:mga05p37_61400_c1 3300050507 Bacteria 4626
279 nmdc:mga09592_76044_c1 3300050508 Bacteria 2855
280 nmdc:mga0a205_8838_c1 3300050515 Bacteria 9176
281 Ga0500643_000352 3300053087 Bacteria 36502
282 Ga0501084_0430397 3300054114 Bacteria 1115
283 Ga0530510_0124938 3300061734 Bacteria 1891
284 Ga0530510_0350570 3300061734 Bacteria 1109
285 8023630365 8023623736 Bacteria 8593882
286 2559424549 2558860280 Bacteria 11429938
287 2644503863 2643221690 Bacteria 4654705
288 2644527068 2643221694 Bacteria 4392972
289 2644670199 2643221722 Bacteria 4247614
290 2729908693 2728369276 Bacteria 5610032
291 2768645852 2767802112 Bacteria 6465194
292 2852680706 2852677369 Bacteria 3768884
293 2855391119 2855386786 Bacteria 4752232
294 2857710870 2857710386 Bacteria 3186771
295 2862186307 2862178590 Bacteria 8583590
296 2867478580 2867475112 Bacteria 6909112
297 2875392642 2875391855 Bacteria 7600475
298 2966923672 2966921586 Bacteria 3092803
299 2990093772 2990088156 Bacteria 6657676
300 2997453954 2997451912 Bacteria 8492419
301 rootH2_10184450
302 JGI25160J50197_1027972
303 Ga0070658_10012697
304 Ga0070658_10015743
305 Ga0070658_10060256
306 Ga0070683_100007790
307 Ga0070683_100015215
308 Ga0070683_100053807
309 Ga0070683_100215902
310 Ga0070670_100012699
311 Ga0070666_10002015
312 Ga0070680_100015004
313 Ga0070682_100002964
314 Ga0070682_100133191
315 Ga0070682_100156057
316 Ga0068868_100010174
317 Ga0070660_100177892
318 Ga0070689_100005462
319 Ga0070692_10123117
320 Ga0070675_100103374
321 Ga0070675_100168970
322 Ga0070671_100023375
323 Ga0070667_100011916
324 Ga0070694_100204547
325 Ga0070708_100200337
326 Ga0070663_100165756
327 Ga0070681_10130445
328 Ga0070685_10035952
329 Ga0070707_100036094
330 Ga0070679_100113756
331 Ga0070679_100295560
332 Ga0070684_100002606
333 Ga0070684_100100585
334 Ga0070686_100010235
335 Ga0070696_100004981
336 Ga0070693_100159389
337 Ga0070665_100051119
338 Ga0068855_100453411
339 Ga0070664_100000439
340 Ga0070664_100380624
341 Ga0068857_100007505
342 Ga0068856_100148901
343 Ga0070702_100059872
344 Ga0068852_100029608
345 Ga0068859_100008953
346 Ga0068864_100039568
347 Ga0068864_100262671
348 Ga0068866_10088847
349 Ga0068861_100411877
350 Ga0068863_100001769
351 Ga0068858_100004840
352 Ga0068858_100078100
353 Ga0068860_100005003
354 Ga0068860_100047755
355 Ga0068860_100073114
356 Ga0081539_10072294
357 Ga0075365_10207339
358 Ga0075364_10021762
359 Ga0097621_100085520
360 Ga0097621_100130652
361 Ga0068871_100005524
362 Ga0075428_100026586
363 Ga0075433_10007403
364 Ga0075429_100028486
365 Ga0068865_100010528
366 Ga0097620_100008953
367 Ga0105245_10003498
368 Ga0105245_10006303
369 Ga0105247_10002861
370 Ga0114129_10050644
371 Ga0105241_10195400
372 Ga0105238_10034354
373 Ga0105238_10057804
374 Ga0105249_10014389
375 Ga0105239_10000854
376 Ga0105239_10030988
377 Ga0105246_10000321
378 Ga0105246_10001583
379 Ga0157369_10072125
380 Ga0163162_10014757
381 Ga0157372_10010217
382 Ga0157372_10021342
383 Ga0157375_10164515
384 Ga0157375_10215080
385 Ga0157375_10266653
386 Ga0163163_10000918
387 Ga0163163_10227709
388 Ga0182008_10066663
389 Ga0157379_10085608
390 Ga0157376_10416148
391 Ga0206354_10231075
392 Ga0206353_10167444
393 Ga0206353_11029603
394 Ga0206353_11782370
395 Ga0213876_10008518
396 Ga0207426_1006832
397 Ga0207710_10068597
398 Ga0207680_10081611
399 Ga0207705_10002849
400 Ga0207707_10001139
401 Ga0207660_10242631
402 Ga0207657_10011446
403 Ga0207649_10136435
404 Ga0207652_10000651
405 Ga0207646_10034080
406 Ga0207694_10042749
407 Ga0207687_10060754
408 Ga0207687_10177858
409 Ga0207664_10014482
410 Ga0207644_10012598
411 Ga0207686_10184539
412 Ga0207686_10363474
413 Ga0207709_10026973
414 Ga0207670_10063673
415 Ga0207711_10018885
416 Ga0207661_10005367
417 Ga0207679_10072505
418 Ga0207667_10325111
419 Ga0207658_10032510
420 Ga0207677_10018613
421 Ga0207703_10040313
422 Ga0207702_10069091
423 Ga0207702_10183348
424 Ga0207641_10028651
425 Ga0207676_10031569
426 Ga0207676_10186962
427 Ga0207674_10012449
428 Ga0207698_10022412
429 Ga0268266_10028609
430 Ga0265338_10244705
431 Ga0265328_10045002
432 Ga0265320_10001908
433 Ga0265320_10013098
434 Ga0265339_10008441
435 Ga0265339_10021301
436 Ga0307508_10035526
437 Ga0307514_10059318
438 Ga0316575_10004203
439 Ga0316579_10002232
440 Ga0265314_10003795
441 Ga0265314_10010101
442 Ga0265342_10000079
443 Ga0265342_10002293
444 Ga0316576_10007072
445 Ga0316578_10018131
446 Ga0316577_10003582
447 Ga0316583_10005810
448 Ga0316585_10002697
449 Ga0316580_10004095
450 Ga0373938_0009168
451 Ga0373955_0099578
452 Ga0316574_0077135
453 Ga0373937_0006319
454 Ga0373937_0109628
455 Ga0373937_0181205
456 Ga0316582_0021690
457 Ga0316584_0032488
458 Ga0395898_0043213
459 Ga0436365_0153626
460 Ga0436362_0175941
461 Ga0466969_0001843
462 Ga0466972_0117251
463 Ga0466965_0002652
464 Ga0466965_0098932
465 Ga0466961_0055280
466 Ga0466961_0056038
467 Ga0466963_0176143
468 Ga0466964_0022735
469 Ga0466964_0025569
470 Ga0466971_0001759
471 Ga0466971_0002023
472 Ga0466971_0018942
473 Ga0466970_0008174
474 Ga0466957_0049125
475 Ga0466960_0104827
476 Ga0466959_0015725
477 Ga0466959_0110874
478 Ga0451576_0091689
479 Ga0466958_0006224
480 Ga0466967_0008799
481 Ga0466967_0105603
482 Ga0466967_0169808
483 Ga0495627_044339
484 Ga0495603_0135257
485 Ga0495641_0080146
486 Ga0495605_0104759
487 Ga0495644_0022086
488 Ga0495598_0016074
489 Ga0495656_0001772
490 Ga0495659_0011099
491 Ga0495670_0026768
492 Ga0495581_0131749
493 Ga0495636_0032375
494 Ga0496101_0068374
495 Ga0496102_0004167
496 Ga0496103_0022769
497 Ga0496104_0398947
498 Ga0496106_0096102
499 Ga0496107_0058579
500 Ga0496107_0117892
501 Ga0496108_0134362
502 Ga0496108_0141619
503 Ga0496108_0271473
504 Ga0496108_0279605
505 Ga0496109_0016934
506 Ga0496109_0020053
507 Ga0496109_0031853
508 Ga0496109_0045400
509 Ga0496109_0204151
510 Ga0496111_0086769
511 Ga0496112_0117181
512 Ga0496113_0168050
513 Ga0496114_0007444
514 Ga0496114_0144296
515 Ga0496114_0180304
516 Ga0496114_0303800
517 Ga0496115_0009937
518 Ga0496115_0068303
519 Ga0496115_0128752
520 Ga0496118_0019944
521 Ga0496122_0000899
522 Ga0496125_0000025
523 Ga0501031_0037513
524 Ga0501031_0081159
525 Ga0501032_0009910
526 Ga0501033_0006989
527 Ga0501033_0062341
528 Ga0501034_0045818
529 Ga0501034_0161580
530 Ga0501034_0423747
531 Ga0501036_0004918
532 Ga0501036_0011295
533 Ga0501037_0021877
534 Ga0501038_0006565
535 Ga0501039_0006003
536 Ga0501040_0117020
537 Ga0501040_0207767
538 Ga0501042_0008859
539 Ga0501043_0007999
540 Ga0501043_0023498
541 Ga0501043_0045799
542 Ga0501046_0001157
543 Ga0501046_0039058
544 Ga0501046_0196632
545 Ga0501047_0146836
546 Ga0501048_0018719
547 Ga0501067_0001727
548 Ga0501067_0036530
549 Ga0501068_0064388
550 Ga0501068_0084766
551 Ga0501069_0002444
552 Ga0501070_0005938
553 Ga0501070_0013052
554 Ga0501070_0017927
555 Ga0501070_0076778
556 Ga0501070_0161933
557 Ga0501070_0411090
558 Ga0501071_0019149
559 Ga0501071_0300690
560 Ga0501072_0077480
561 Ga0501072_0170576
562 Ga0501073_0017121
563 Ga0501073_0045087
564 Ga0501073_0215577
565 Ga0501074_0029015
566 Ga0501074_0047667
567 Ga0501077_0024168
568 Ga0501079_0018510
569 Ga0501080_0076789
570 Ga0501080_0231055
571 Ga0501083_0021277
572 Ga0501035_0188141
573 Ga0501044_0073092
574 Ga0501045_0058998
575 Ga0501045_0091409
576 nmdc:mga03683_7351_c1
577 nmdc:mga0yw44_89883_c1
578 nmdc:mga05p37_61400_c1
579 nmdc:mga09592_76044_c1
580 nmdc:mga0a205_8838_c1
581 Ga0500643_000352
582 Ga0501084_0430397
583 Ga0530510_0124938
584 Ga0530510_0350570
585 8023630365
586 2559424549
587 2644503863
588 2644527068
589 2644670199
590 2729908693
591 2768645852
592 2852680706
593 2855391119
594 2857710870
595 2862186307
596 2867478580
597 2875392642
598 2966923672
599 2990093772
600 2997453954

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

161

389

0.92

PF00383

dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

15

115

0.91

PF14437

MafB19-deam

MafB19-like deaminase

16

131

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hxv-assembly1.cif.gz_A-2 crystal structure of a diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (tm1828) from thermotoga maritima at 1.80 a resolution 0.9128 2 332
2azn-assembly1.cif.gz_A x-ray structure of 2,5-diamino-6-ribosylamino-4(3h)-pyrimidinone 5-phosphate reductase 0.9026 144 333
2hxv-assembly1.cif.gz_A-2 crystal structure of a diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (tm1828) from thermotoga maritima at 1.80 a resolution 0.8996 2 332
6p8c-assembly1.cif.gz_B 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate reductase (mthred) from methanothermobacter thermautotrophicus 0.8934 144 332
8dq9-assembly1.cif.gz_B crystal structure of gdp bound 3-dehydroquinate dehydratase i from klebsiella oxytoca 0.8861 2 330
ID Description Score Start End Superfamily
af_P9WPH1_1_147_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.988 2 138 3.40.140.10
af_P9WPH1_148_338_3.40.430.10 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.9646 141 330 3.40.430.10
af_Q8GWP5_63_211_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9468 4 138 3.40.140.10
af_P9WPH1_148_338_3.40.430.10 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.9449 141 330 3.40.430.10
4g3mB01 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9335 2 130 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A0P0SKQ6-F1-model_v4 Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)] 0.9837 5 334 GO:0008270
GO:0008703
GO:0008835
GO:0009231
AF-A0A1S4VK55-F1-model_v4 Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)] 0.9812 2 335 GO:0008270
GO:0008703
GO:0008835
GO:0009231
AF-A0A495W6W2-F1-model_v4 Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)] 0.9811 2 331 GO:0008270
GO:0008703
GO:0008835
GO:0009231
AF-P9WPH1-F1-model_v4 Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)] 0.9788 2 330 GO:0005829
GO:0005886
GO:0008270
GO:0008703
GO:0008835
GO:0009231
AF-A0A367ALU6-F1-model_v4 Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)] 0.9774 7 335 GO:0008270
GO:0008703
GO:0008835
GO:0009231

Map