F395632

General Info

Members Datasets Scaffolds Average Seq Length
300 231 600 806

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221678|2644442348
Length 856
Sequence STKTPPPDESFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRIVYQMNEMGLRPERGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRVPLIDGHGNFGSLGNDDPPAAMRYTECRQAQATSLMTESIDEDTVDFSPNYDGQEQEPVALPAAFPNLLVNGASGIAVGMATNMPPHNLGEVIAAARHLIRYPGADLDALMKYVPGPDLPTGGRIVGLSGIRDAYENGRGTFKIRATVSVETVTARRKGLVITELPFTVGPEKVIAKIKDLVGSKKIQGIADVKDLTDRAHGLRLVIEIKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKELLEVYLDHRFTVVRRRSEFRRSKRRDRLHLVEGLLTALVDIDEVIRLIRSSDNSAEAKQRLMERFSLSEIQTQYILDTPLRRLTKYDRIELEAEKEKLNEEIAELTRILDSDAELRKLVSAELASVAKKFGTERRTVLLESSGTTAAAVPLQVADDPCRVLLSSTGLLARTANGEPFTENAEDAEDGGGKRTKHDVIVSAVSATARGEIGAVTSSGRLLRINVVDLPQLPDTASAPNLSGGAPLAEFVSLEGDETVICLTTLDESSPGLAIGTEQGVVKRVVPDYPTNKDELEVITLRDGDRIVGAVELRTGEEDLVFIADDAQLLRYQASQVRPQGRAAGGMAGIKLTEGAKVISFTAVDPAVDAVVFTIAGSRGTLDDSVQTTAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLSLAWAGPVPAKAAQKNGLPAELPEMDPRRDGSGVSLTKTVSVVAGPYRKAEDRPRTGCTRVIRQRGGVPCRASRARRELPDAP

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
3 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
4 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
5 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
6 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
7 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
8 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
9 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
10 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
14 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
15 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
16 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
17 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
18 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
19 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
20 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
21 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
22 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
23 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
24 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
25 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
26 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
27 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
28 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
29 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
30 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
31 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
32 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
33 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
34 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
35 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
36 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
37 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
38 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
39 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
40 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
41 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
42 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
43 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
44 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
45 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
46 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
47 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
48 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
49 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
50 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
51 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
52 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
53 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
54 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
55 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
56 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
57 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
58 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
59 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
60 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
61 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
62 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
63 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
64 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
65 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
66 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
67 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
68 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
69 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
70 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
71 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
72 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
75 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
76 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
77 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
78 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
79 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
80 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
83 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
84 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
85 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
86 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
87 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
88 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
89 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
90 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
91 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
92 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
93 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
94 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
95 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
96 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
97 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
98 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
121 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
122 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
123 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
124 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
125 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
126 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
127 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
128 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
129 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
130 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
131 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
132 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
133 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
134 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
135 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
136 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
137 2643221548 Streptomyces sp. Root55 Isolate Unclassified
138 2643221578 Streptomyces sp. Root63 Isolate Unclassified
139 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
140 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
141 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
142 2643221647 Streptomyces sp. Root369 Isolate Unclassified
143 2643221670 Streptomyces sp. Root431 Isolate Unclassified
144 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
145 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
146 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
147 2643221714 Streptomyces sp. Root264 Isolate Unclassified
148 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
149 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
150 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
151 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
152 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
153 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
154 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
155 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
156 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
157 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
158 2808606448 Streptomyces sp. 193411 Isolate Unclassified
159 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
160 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
161 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
162 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
163 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
164 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
165 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
166 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
167 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
168 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
169 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
170 2862574272 Streptomyces sp. AcE210 Isolate Nodule
171 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
172 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
173 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
174 2867369537 Streptomyces sp. Z26 Isolate Unclassified
175 2867475112 Streptomyces sp. TM32 Isolate Unclassified
176 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
177 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
178 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
179 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
180 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
181 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
182 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
183 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
184 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
185 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
186 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
187 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
188 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
189 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
190 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
191 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
192 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
193 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
194 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
195 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
196 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
197 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
198 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
199 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
200 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
201 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
202 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
203 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
204 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
205 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
206 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
207 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
208 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
209 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
210 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
211 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
212 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
213 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
214 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
215 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
216 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
217 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
218 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
219 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
220 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
221 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
222 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
223 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
224 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
225 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
226 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
227 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
228 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
229 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
230 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
231 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 65.67
Metatranscriptomes 0.33
Isolates 34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.33
Nodule 1
Rhizoplane 0.67
Rhizosphere 76
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10006092 3300001990 Bacteria 4132
2 Ga0070714_100004970 3300005435 Bacteria 10107
3 Ga0070698_100001007 3300005471 Bacteria 30987
4 Ga0075367_10000073 3300006178 Bacteria 25699
5 Ga0182008_10000172 3300014497 Bacteria 50594
6 Ga0182007_10004415 3300015262 Bacteria 6376
7 Ga0183367_1001 3300015688 Bacteria 1225545
8 Ga0224712_10001196 3300022467 Bacteria 5835
9 Ga0207647_10003701 3300025904 Bacteria 11431
10 Ga0207684_10037930 3300025910 Bacteria 4089
11 Ga0207693_10041357 3300025915 Bacteria 3628
12 Ga0207664_10006555 3300025929 Bacteria 8020
13 Ga0207664_10010820 3300025929 Bacteria 6458
14 Ga0207664_10017494 3300025929 Bacteria 5257
15 Ga0307517_10003217 3300028786 Bacteria 25626
16 Ga0307517_10003436 3300028786 Bacteria 24619
17 Ga0307515_10023813 3300028794 Bacteria 10706
18 Ga0307511_10004427 3300030521 Bacteria 14342
19 Ga0307512_10002924 3300030522 Bacteria 20655
20 Ga0307513_10002525 3300031456 Bacteria 25288
21 Ga0307509_10058408 3300031507 Bacteria 4086
22 Ga0307508_10002283 3300031616 Bacteria 20393
23 Ga0307508_10022014 3300031616 Bacteria 5799
24 Ga0307514_10040513 3300031649 Bacteria 3671
25 Ga0307516_10001470 3300031730 Bacteria 32516
26 Ga0307507_10003119 3300033179 Bacteria 33032
27 Ga0307507_10065316 3300033179 Bacteria 3347
28 Ga0373925_0000850 3300037068 Bacteria 27976
29 Ga0395898_0003752 3300037466 Bacteria 16835
30 Ga0395898_0036407 3300037466 Bacteria 4886
31 Ga0400485_22316 3300038735 Bacteria 100302
32 Ga0400486_31662 3300038742 Bacteria 29804
33 Ga0439436_0000880 3300041404 Bacteria 8216
34 Ga0439449_0001000 3300042007 Bacteria 11123
35 Ga0439457_005466 3300042014 Bacteria 3195
36 Ga0450899_000080 3300042135 Bacteria 8084
37 Ga0450903_000070 3300042138 Bacteria 20519
38 Ga0450906_000640 3300042145 Bacteria 7469
39 Ga0439458_0000118 3300042157 Bacteria 16080
40 Ga0439460_0003283 3300042461 Bacteria 3916
41 Ga0466969_0007803 3300044656 Bacteria 5689
42 Ga0466969_0008312 3300044656 Bacteria 5504
43 Ga0466972_0003961 3300044658 Bacteria 7388
44 Ga0466965_0005274 3300044683 Bacteria 5814
45 Ga0466966_0010738 3300044684 Bacteria 6088
46 Ga0466966_0034562 3300044684 Bacteria 3268
47 Ga0466961_0000652 3300044693 Bacteria 21812
48 Ga0466961_0001866 3300044693 Bacteria 13088
49 Ga0466961_0062370 3300044693 Bacteria 2369
50 Ga0466963_0000209 3300044694 Bacteria 24975
51 Ga0466963_0000210 3300044694 Bacteria 24944
52 Ga0466971_0000483 3300044719 Bacteria 15651
53 Ga0466971_0004467 3300044719 Bacteria 6041
54 Ga0466970_0005003 3300044765 Bacteria 6548
55 Ga0466957_0000438 3300044842 Bacteria 20495
56 Ga0466957_0012033 3300044842 Bacteria 5002
57 Ga0466959_0008897 3300045049 Bacteria 7120
58 Ga0466959_0009133 3300045049 Bacteria 7040
59 Ga0466958_0001374 3300045836 Bacteria 11499
60 Ga0466967_0000608 3300045976 Bacteria 17847
61 Ga0466967_0006724 3300045976 Bacteria 8181
62 Ga0495617_005532 3300046452 Bacteria 4473
63 Ga0495592_0007948 3300046454 Bacteria 7956
64 Ga0495592_0011398 3300046454 Bacteria 6726
65 Ga0495603_0000234 3300046455 Bacteria 28916
66 Ga0495603_0006453 3300046455 Bacteria 7024
67 Ga0495629_0024617 3300046459 Bacteria 4285
68 Ga0495638_0020905 3300046460 Bacteria 4321
69 Ga0495651_0003881 3300046462 Bacteria 11433
70 Ga0495651_0012044 3300046462 Bacteria 6656
71 Ga0495651_0020607 3300046462 Bacteria 5119
72 Ga0495639_0001997 3300046475 Bacteria 9037
73 Ga0495662_0000175 3300046476 Bacteria 25558
74 Ga0495662_0004341 3300046476 Bacteria 7120
75 Ga0495662_0011562 3300046476 Bacteria 4314
76 Ga0495594_0000206 3300046499 Bacteria 28775
77 Ga0495594_0010458 3300046499 Bacteria 4814
78 Ga0495594_0035079 3300046499 Bacteria 2731
79 Ga0495616_0005954 3300046513 Bacteria 7437
80 Ga0495618_0013382 3300046514 Bacteria 4992
81 Ga0495628_0001572 3300046516 Bacteria 20919
82 Ga0495637_0008218 3300046520 Bacteria 5132
83 Ga0495643_0002325 3300046522 Bacteria 15284
84 Ga0495648_0042621 3300046524 Bacteria 2853
85 Ga0495666_0002893 3300046526 Bacteria 8597
86 Ga0495652_0015083 3300046529 Bacteria 6922
87 Ga0495652_0015975 3300046529 Bacteria 6719
88 Ga0495652_0022273 3300046529 Bacteria 5623
89 Ga0495640_0009442 3300046533 Bacteria 7598
90 Ga0495586_0010803 3300046535 Bacteria 4855
91 Ga0495587_0003949 3300046536 Bacteria 9835
92 Ga0495609_0004172 3300046538 Bacteria 8020
93 Ga0495597_0007258 3300046542 Bacteria 5646
94 Ga0495645_0028570 3300046543 Bacteria 4053
95 Ga0495622_0009813 3300046557 Bacteria 4426
96 Ga0495667_0003099 3300046559 Bacteria 11146
97 Ga0495668_0022181 3300046616 Bacteria 3630
98 Ga0495634_0012284 3300046642 Bacteria 6207
99 Ga0495634_0012667 3300046642 Bacteria 6104
100 Ga0495634_0017782 3300046642 Bacteria 5069
101 Ga0495611_0006992 3300046648 Bacteria 4795
102 Ga0495625_0003876 3300046660 Bacteria 14447
103 Ga0495635_0001216 3300046663 Bacteria 17230
104 Ga0495588_0001437 3300046674 Bacteria 10188
105 Ga0495588_0014714 3300046674 Bacteria 3751
106 Ga0495657_0004743 3300046675 Bacteria 10833
107 Ga0495657_0008937 3300046675 Bacteria 7623
108 Ga0495646_0003470 3300046680 Bacteria 9812
109 Ga0495646_0016705 3300046680 Bacteria 4660
110 Ga0495646_0037040 3300046680 Bacteria 3019
111 Ga0495658_0031500 3300046683 Bacteria 2889
112 Ga0495613_0000356 3300046689 Bacteria 40413
113 Ga0495613_0001768 3300046689 Bacteria 16442
114 Ga0495613_0002437 3300046689 Bacteria 14034
115 Ga0495670_0004087 3300046691 Bacteria 7159
116 Ga0495600_0032203 3300046809 Bacteria 3400
117 Ga0495604_0009722 3300047317 Bacteria 7606
118 Ga0495604_0025395 3300047317 Bacteria 4721
119 Ga0495604_0036433 3300047317 Bacteria 3878
120 Ga0495636_0018309 3300047318 Bacteria 2809
121 Ga0495674_0050943 3300047319 Bacteria 3651
122 Ga0495676_0001740 3300047321 Bacteria 19028
123 Ga0495676_0001900 3300047321 Bacteria 18344
124 Ga0495676_0008947 3300047321 Bacteria 9144
125 Ga0495676_0024025 3300047321 Bacteria 5281
126 Ga0495676_0029632 3300047321 Bacteria 4659
127 Ga0495680_0000822 3300047322 Bacteria 34626
128 Ga0495680_0010216 3300047322 Bacteria 8380
129 Ga0495687_001325 3300047443 Bacteria 23102
130 Ga0495687_001531 3300047443 Bacteria 21080
131 Ga0495675_0030147 3300047444 Bacteria 3461
132 Ga0495675_0032046 3300047444 Bacteria 3356
133 Ga0495685_000119 3300047447 Bacteria 27159
134 Ga0495685_013251 3300047447 Bacteria 2797
135 Ga0495685_018522 3300047447 Bacteria 2390
136 Ga0495681_0005293 3300047470 Bacteria 8660
137 Ga0495681_0006706 3300047470 Bacteria 7512
138 Ga0495684_0028604 3300047471 Bacteria 4278
139 Ga0495593_0018849 3300047673 Bacteria 3873
140 Ga0495593_0023322 3300047673 Bacteria 3441
141 Ga0495602_0043224 3300048088 Bacteria 4099
142 Ga0495614_0000465 3300048089 Bacteria 16675
143 Ga0496108_0050928 3300048911 Bacteria 3469
144 Ga0496121_0022182 3300048924 Bacteria 6177
145 Ga0501031_0003181 3300049568 Bacteria 10538
146 Ga0501032_0001158 3300049569 Bacteria 21132
147 Ga0501032_0011859 3300049569 Bacteria 6243
148 Ga0501033_0003431 3300049570 Bacteria 13041
149 Ga0501033_0011529 3300049570 Bacteria 6763
150 Ga0501034_0002015 3300049571 Bacteria 25604
151 Ga0501034_0010557 3300049571 Bacteria 9613
152 Ga0501034_0026984 3300049571 Bacteria 5842
153 Ga0501034_0029331 3300049571 Bacteria 5591
154 Ga0501034_0036440 3300049571 Bacteria 4983
155 Ga0501034_0040515 3300049571 Bacteria 4715
156 Ga0501036_0000968 3300049572 Bacteria 21659
157 Ga0501036_0010578 3300049572 Bacteria 7622
158 Ga0501036_0011219 3300049572 Bacteria 7414
159 Ga0501037_0011344 3300049573 Bacteria 6560
160 Ga0501038_0022642 3300049574 Bacteria 5626
161 Ga0501039_0002983 3300049575 Bacteria 12661
162 Ga0501039_0016205 3300049575 Bacteria 5710
163 Ga0501043_0004920 3300049579 Bacteria 10802
164 Ga0501043_0022601 3300049579 Bacteria 4930
165 Ga0501046_0011576 3300049580 Bacteria 7541
166 Ga0501046_0016850 3300049580 Bacteria 6110
167 Ga0501047_0000015 3300049581 Bacteria 307932
168 Ga0501047_0000074 3300049581 Bacteria 125728
169 Ga0501047_0006328 3300049581 Bacteria 11139
170 Ga0501047_0007328 3300049581 Bacteria 10377
171 Ga0501047_0047089 3300049581 Bacteria 4166
172 Ga0501048_0007411 3300049582 Bacteria 8315
173 Ga0501048_0008772 3300049582 Bacteria 7618
174 Ga0501067_0003434 3300049583 Bacteria 8717
175 Ga0501068_0001890 3300049584 Bacteria 11140
176 Ga0501070_0001159 3300049586 Bacteria 23581
177 Ga0501071_0006217 3300049587 Bacteria 7745
178 Ga0501072_0011267 3300049588 Bacteria 6827
179 Ga0501074_0000096 3300049590 Bacteria 42346
180 Ga0501076_0005981 3300049592 Bacteria 8784
181 Ga0501035_0000304 3300049822 Bacteria 57980
182 Ga0501035_0010092 3300049822 Bacteria 8766
183 Ga0501044_0000395 3300049823 Bacteria 54228
184 Ga0501044_0001618 3300049823 Bacteria 26391
185 Ga0501044_0003465 3300049823 Bacteria 17778
186 Ga0501044_0003585 3300049823 Bacteria 17470
187 Ga0501044_0066950 3300049823 Bacteria 3660
188 Ga0501045_0013591 3300049824 Bacteria 5752
189 nmdc:mga06z11_524_c1 3300050494 Bacteria 14191
190 nmdc:mga07m45_19638_c1 3300050496 Bacteria 3663
191 Ga0495595_0004015 3300053084 Bacteria 5884
192 Ga0495619_0016009 3300053085 Bacteria 4746
193 Ga0500652_001220 3300053131 Bacteria 8191
194 Ga0500658_0004856 3300053134 Bacteria 5014
195 Ga0500573_0035454 3300053140 Bacteria 2879
196 Ga0500634_0000612 3300053161 Bacteria 11984
197 Ga0466962_0000498 3300061719 Bacteria 17033
198 Ga0466962_0008260 3300061719 Bacteria 4988
199 2644442348 2643221678 Bacteria 9540101
200 2547407322 2547132111 Bacteria 8013147
201 2554255841 2554235005 Bacteria 6457341
202 2585297295 2582581312 Bacteria 7308206
203 2585318490 2582581314 Bacteria 11452267
204 2616699263 2616644814 Bacteria 11555299
205 2616902269 2616644941 Bacteria 8510691
206 2643761380 2643221548 Bacteria 8053412
207 2643899012 2643221578 Bacteria 9213798
208 2643943049 2643221587 Bacteria 7586415
209 2644016350 2643221601 Bacteria 7493239
210 2644174644 2643221631 Bacteria 8168043
211 2644265017 2643221647 Bacteria 10741251
212 2644388442 2643221670 Bacteria 6497041
213 2644402770 2643221673 Bacteria 9196637
214 2644430509 2643221677 Bacteria 7584031
215 2644459218 2643221682 Bacteria 6743283
216 2644626475 2643221714 Bacteria 9015452
217 2731906800 2731639228 Bacteria 4187555
218 2768646410 2767802112 Bacteria 6465194
219 2784590812 2784132148 Bacteria 8627943
220 2785340730 2784746763 Bacteria 9783172
221 2785372037 2784746768 Bacteria 10036182
222 2793981883 2791355406 Bacteria 11364898
223 2799186196 2799112218 Bacteria 4315149
224 2804848357 2802429296 Bacteria 7227771
225 2808844537 2808606359 Bacteria 9866990
226 2808914113 2808606375 Bacteria 9466072
227 2809234566 2808606448 Bacteria 8656184
228 2811843965 2808606982 Bacteria 7791042
229 2812355496 2811994879 Bacteria 9313447
230 2812478347 2811994917 Bacteria 7761064
231 2819697692 2818991463 Bacteria 7948711
232 2819740315 2818991472 Bacteria 10089953
233 2852641556 2852635781 Bacteria 8251373
234 2862180332 2862178590 Bacteria 8583590
235 2862284147 2862281513 Bacteria 9621493
236 2862297128 2862290372 Bacteria 7471434
237 2862383366 2862382967 Bacteria 10317375
238 2862510600 2862507626 Bacteria 9425308
239 2862576975 2862574272 Bacteria 10567477
240 2862707459 2862705112 Bacteria 6563286
241 2863409094 2863404153 Bacteria 9672205
242 2867350786 2867346516 Bacteria 7608576
243 2867374252 2867369537 Bacteria 6501581
244 2867479597 2867475112 Bacteria 6909112
245 2873153628 2873151551 Bacteria 8625867
246 2875397179 2875391855 Bacteria 7600475
247 2877678539 2877676314 Bacteria 9512378
248 2912717107 2912715099 Bacteria 9460473
249 2912729713 2912723979 Bacteria 8557534
250 2912763237 2912757875 Bacteria 7940295
251 2918506993 2918501144 Bacteria 8668083
252 2919474173 2919468124 Bacteria 9133025
253 2935393534 2935390628 Bacteria 7043367
254 2946047385 2946045630 Bacteria 8527308
255 2946070311 2946064051 Bacteria 8957905
256 2946078184 2946072368 Bacteria 8999607
257 2947226459 2947224130 Bacteria 9938529
258 2954010623 2954002825 Bacteria 9173742
259 2954383511 2954380949 Bacteria 10050426
260 2954694303 2954691527 Bacteria 10720516
261 2954709506 2954701450 Bacteria 10834262
262 2954713809 2954711539 Bacteria 10867210
263 2954723776 2954721474 Bacteria 10456478
264 2954738060 2954731030 Bacteria 10243860
265 2954742676 2954740390 Bacteria 10229294
266 2954756918 2954749733 Bacteria 10366972
267 2954761640 2954759201 Bacteria 9358192
268 2966600425 2966598605 Bacteria 7676064
269 2990049275 2990044586 Bacteria 6603797
270 2990067450 2990059506 Bacteria 9321252
271 2990089799 2990088156 Bacteria 6657676
272 2995465242 2995463766 Bacteria 8577691
273 2997454911 2997451912 Bacteria 8492419
274 2997602650 2997600082 Bacteria 9896405
275 3003001189 3002998708 Bacteria 11715108
276 3006322842 3006321560 Bacteria 8247479
277 3006399262 3006393351 Bacteria 6615579
278 3006426195 3006425503 Bacteria 6491253
279 3006486510 3006486233 Bacteria 8157040
280 3006501629 3006493962 Bacteria 8825450
281 8008490103 8008485437 Bacteria 7198341
282 8008563259 8008558824 Bacteria 10610750
283 8008576704 8008574985 Bacteria 7815457
284 8023628459 8023623736 Bacteria 8593882
285 8025417296 8025413630 Bacteria 7014048
286 8025481378 8025478263 Bacteria 8209203
287 8025529164 8025524527 Bacteria 7197316
288 8025533504 8025530807 Bacteria 8495698
289 8033689776 8033684223 Bacteria 6906479
290 8047895642 8047893842 Bacteria 11723082
291 8048129980 8048127548 Bacteria 11053136
292 8048363297 8048356638 Bacteria 11044339
293 8048372665 8048369669 Bacteria 11666822
294 8048381600 8048379754 Bacteria 11877923
295 8048408759 8048406513 Bacteria 8936924
296 8054166602 8054160619 Bacteria 7783213
297 8056063322 8056060235 Bacteria 7259403
298 8056453417 8056447290 Bacteria 7680491
299 8056669859 8056667051 Bacteria 6953971
300 8056830035 8056829672 Bacteria 9045328
301 JGI24737J22298_10006092
302 Ga0070714_100004970
303 Ga0070698_100001007
304 Ga0075367_10000073
305 Ga0182008_10000172
306 Ga0182007_10004415
307 Ga0183367_1001
308 Ga0224712_10001196
309 Ga0207647_10003701
310 Ga0207684_10037930
311 Ga0207693_10041357
312 Ga0207664_10006555
313 Ga0207664_10010820
314 Ga0207664_10017494
315 Ga0307517_10003217
316 Ga0307517_10003436
317 Ga0307515_10023813
318 Ga0307511_10004427
319 Ga0307512_10002924
320 Ga0307513_10002525
321 Ga0307509_10058408
322 Ga0307508_10002283
323 Ga0307508_10022014
324 Ga0307514_10040513
325 Ga0307516_10001470
326 Ga0307507_10003119
327 Ga0307507_10065316
328 Ga0373925_0000850
329 Ga0395898_0003752
330 Ga0395898_0036407
331 Ga0400485_22316
332 Ga0400486_31662
333 Ga0439436_0000880
334 Ga0439449_0001000
335 Ga0439457_005466
336 Ga0450899_000080
337 Ga0450903_000070
338 Ga0450906_000640
339 Ga0439458_0000118
340 Ga0439460_0003283
341 Ga0466969_0007803
342 Ga0466969_0008312
343 Ga0466972_0003961
344 Ga0466965_0005274
345 Ga0466966_0010738
346 Ga0466966_0034562
347 Ga0466961_0000652
348 Ga0466961_0001866
349 Ga0466961_0062370
350 Ga0466963_0000209
351 Ga0466963_0000210
352 Ga0466971_0000483
353 Ga0466971_0004467
354 Ga0466970_0005003
355 Ga0466957_0000438
356 Ga0466957_0012033
357 Ga0466959_0008897
358 Ga0466959_0009133
359 Ga0466958_0001374
360 Ga0466967_0000608
361 Ga0466967_0006724
362 Ga0495617_005532
363 Ga0495592_0007948
364 Ga0495592_0011398
365 Ga0495603_0000234
366 Ga0495603_0006453
367 Ga0495629_0024617
368 Ga0495638_0020905
369 Ga0495651_0003881
370 Ga0495651_0012044
371 Ga0495651_0020607
372 Ga0495639_0001997
373 Ga0495662_0000175
374 Ga0495662_0004341
375 Ga0495662_0011562
376 Ga0495594_0000206
377 Ga0495594_0010458
378 Ga0495594_0035079
379 Ga0495616_0005954
380 Ga0495618_0013382
381 Ga0495628_0001572
382 Ga0495637_0008218
383 Ga0495643_0002325
384 Ga0495648_0042621
385 Ga0495666_0002893
386 Ga0495652_0015083
387 Ga0495652_0015975
388 Ga0495652_0022273
389 Ga0495640_0009442
390 Ga0495586_0010803
391 Ga0495587_0003949
392 Ga0495609_0004172
393 Ga0495597_0007258
394 Ga0495645_0028570
395 Ga0495622_0009813
396 Ga0495667_0003099
397 Ga0495668_0022181
398 Ga0495634_0012284
399 Ga0495634_0012667
400 Ga0495634_0017782
401 Ga0495611_0006992
402 Ga0495625_0003876
403 Ga0495635_0001216
404 Ga0495588_0001437
405 Ga0495588_0014714
406 Ga0495657_0004743
407 Ga0495657_0008937
408 Ga0495646_0003470
409 Ga0495646_0016705
410 Ga0495646_0037040
411 Ga0495658_0031500
412 Ga0495613_0000356
413 Ga0495613_0001768
414 Ga0495613_0002437
415 Ga0495670_0004087
416 Ga0495600_0032203
417 Ga0495604_0009722
418 Ga0495604_0025395
419 Ga0495604_0036433
420 Ga0495636_0018309
421 Ga0495674_0050943
422 Ga0495676_0001740
423 Ga0495676_0001900
424 Ga0495676_0008947
425 Ga0495676_0024025
426 Ga0495676_0029632
427 Ga0495680_0000822
428 Ga0495680_0010216
429 Ga0495687_001325
430 Ga0495687_001531
431 Ga0495675_0030147
432 Ga0495675_0032046
433 Ga0495685_000119
434 Ga0495685_013251
435 Ga0495685_018522
436 Ga0495681_0005293
437 Ga0495681_0006706
438 Ga0495684_0028604
439 Ga0495593_0018849
440 Ga0495593_0023322
441 Ga0495602_0043224
442 Ga0495614_0000465
443 Ga0496108_0050928
444 Ga0496121_0022182
445 Ga0501031_0003181
446 Ga0501032_0001158
447 Ga0501032_0011859
448 Ga0501033_0003431
449 Ga0501033_0011529
450 Ga0501034_0002015
451 Ga0501034_0010557
452 Ga0501034_0026984
453 Ga0501034_0029331
454 Ga0501034_0036440
455 Ga0501034_0040515
456 Ga0501036_0000968
457 Ga0501036_0010578
458 Ga0501036_0011219
459 Ga0501037_0011344
460 Ga0501038_0022642
461 Ga0501039_0002983
462 Ga0501039_0016205
463 Ga0501043_0004920
464 Ga0501043_0022601
465 Ga0501046_0011576
466 Ga0501046_0016850
467 Ga0501047_0000015
468 Ga0501047_0000074
469 Ga0501047_0006328
470 Ga0501047_0007328
471 Ga0501047_0047089
472 Ga0501048_0007411
473 Ga0501048_0008772
474 Ga0501067_0003434
475 Ga0501068_0001890
476 Ga0501070_0001159
477 Ga0501071_0006217
478 Ga0501072_0011267
479 Ga0501074_0000096
480 Ga0501076_0005981
481 Ga0501035_0000304
482 Ga0501035_0010092
483 Ga0501044_0000395
484 Ga0501044_0001618
485 Ga0501044_0003465
486 Ga0501044_0003585
487 Ga0501044_0066950
488 Ga0501045_0013591
489 nmdc:mga06z11_524_c1
490 nmdc:mga07m45_19638_c1
491 Ga0495595_0004015
492 Ga0495619_0016009
493 Ga0500652_001220
494 Ga0500658_0004856
495 Ga0500573_0035454
496 Ga0500634_0000612
497 Ga0466962_0000498
498 Ga0466962_0008260
499 2644442348
500 2547407322
501 2554255841
502 2585297295
503 2585318490
504 2616699263
505 2616902269
506 2643761380
507 2643899012
508 2643943049
509 2644016350
510 2644174644
511 2644265017
512 2644388442
513 2644402770
514 2644430509
515 2644459218
516 2644626475
517 2731906800
518 2768646410
519 2784590812
520 2785340730
521 2785372037
522 2793981883
523 2799186196
524 2804848357
525 2808844537
526 2808914113
527 2809234566
528 2811843965
529 2812355496
530 2812478347
531 2819697692
532 2819740315
533 2852641556
534 2862180332
535 2862284147
536 2862297128
537 2862383366
538 2862510600
539 2862576975
540 2862707459
541 2863409094
542 2867350786
543 2867374252
544 2867479597
545 2873153628
546 2875397179
547 2877678539
548 2912717107
549 2912729713
550 2912763237
551 2918506993
552 2919474173
553 2935393534
554 2946047385
555 2946070311
556 2946078184
557 2947226459
558 2954010623
559 2954383511
560 2954694303
561 2954709506
562 2954713809
563 2954723776
564 2954738060
565 2954742676
566 2954756918
567 2954761640
568 2966600425
569 2990049275
570 2990067450
571 2990089799
572 2995465242
573 2997454911
574 2997602650
575 3003001189
576 3006322842
577 3006399262
578 3006426195
579 3006486510
580 3006501629
581 8008490103
582 8008563259
583 8008576704
584 8023628459
585 8025417296
586 8025481378
587 8025529164
588 8025533504
589 8033689776
590 8047895642
591 8048129980
592 8048363297
593 8048372665
594 8048381600
595 8048408759
596 8054166602
597 8056063322
598 8056453417
599 8056669859
600 8056830035

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00521

DNA_topoisoIV

DNA gyrase/topoisomerase IV, subunit A

39

481

0.99

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

671

718

0.95

PF03989

DNA_gyraseA_C

DNA gyrase C-terminal domain, beta-propeller

742

776

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ddq-assembly3.cif.gz_F structural plasticity of the bacillus subtilis gyra homodimer 0.9613 44 500
4ddq-assembly3.cif.gz_F structural plasticity of the bacillus subtilis gyra homodimer 0.9571 44 500
2inr-assembly1.cif.gz_A-2 crystal structure of a 59 kda fragment of topoisomerase iv subunit a (grla) from staphylococcus aureus 0.9387 44 505
2inr-assembly1.cif.gz_A-2 crystal structure of a 59 kda fragment of topoisomerase iv subunit a (grla) from staphylococcus aureus 0.9367 44 505
4ddq-assembly2.cif.gz_C structural plasticity of the bacillus subtilis gyra homodimer 0.9359 43 500
ID Description Score Start End Superfamily
2xcqA04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9714 383 470 1.10.268.10
2xcoA04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9703 383 470 1.10.268.10
2xcrS04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.961 383 470 1.10.268.10
2xcrU04 Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 0.9598 383 470 1.10.268.10
4ddqF02 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2; 0.9582 248 345 3.30.1360.40
ID Description Score Start End GO Terms
AF-A0A3A1XIX8-F1-model_v4 DNA topoisomerase IV 0.9831 333 501 GO:0003677
GO:0005524
GO:0005737
GO:0006265
GO:0009330
GO:0034335
AF-A0A4Y8SWV6-F1-model_v4 DNA gyrase subunit A 0.9753 340 463 GO:0003677
GO:0005524
GO:0005737
GO:0006265
GO:0009330
GO:0034335
AF-J9H5B3-F1-model_v4 deleted 0.9722 335 500
AF-A0A3C0IY57-F1-model_v4 DNA gyrase subunit A 0.9698 295 495 GO:0003677
GO:0005524
GO:0005737
GO:0006265
GO:0009330
GO:0034335
AF-A0A381KLX5-F1-model_v4 DNA gyrase subunit A (EC 5.99.1.3) 0.9694 313 496 GO:0003677
GO:0005524
GO:0005737
GO:0006265
GO:0009330
GO:0034335

Map