F394930

General Info

Members Datasets Scaffolds Average Seq Length
299 148 598 223

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0003359|Ga0395900_0003359_3952_4713
Length 253
Sequence VLDALEGVRVGDHRPNERTTVMATSDATPRAGEQEGASPSLRVVVADDDALLREGIAALLTDAGHQVVGRSGDANDLLLKVRSYTPDIAIVDVRMPPGNADDGLVAAAQIRRTYPSVAVLVLSQHLEPTYMLELVGDDASGVGYLLKDRVRDVAEFVDAVERVAGGGTAFDPEVVKHLVGGHRRSALEDLTDRERDVLSLLAEGRSNRAVGKQLYLSPRAVERHVQAIFQKLDLPDTEDDNRRVLAVLALLGH

Samples

Sample ID Description Type Environment
1 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
13 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
64 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
65 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
66 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
67 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
68 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
88 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
91 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
99 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
100 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
110 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
111 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
112 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
119 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
145 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
146 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 2862574272 Streptomyces sp. AcE210 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.67
Metatranscriptomes 0
Isolates 0.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1
Nodule 0.33
Rhizoplane 20.4
Rhizosphere 77.26
Stem 0
Stem Tuber 0
Unclassified 1.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395900_0003359 3300037418 Bacteria 17292
2 Ga0068868_100246972 3300005338 Bacteria 1501
3 Ga0070667_100460166 3300005367 Bacteria 1163
4 Ga0070714_100154832 3300005435 Bacteria 2068
5 Ga0070708_100068806 3300005445 Bacteria 3183
6 Ga0070678_100203118 3300005456 Bacteria 1637
7 Ga0070678_100275408 3300005456 Bacteria 1421
8 Ga0070678_100443333 3300005456 Bacteria 1136
9 Ga0068867_100560148 3300005459 Bacteria 991
10 Ga0070698_100285982 3300005471 Unclassified 1580
11 Ga0070699_100137950 3300005518 Bacteria 2152
12 Ga0070699_100183888 3300005518 Bacteria 1855
13 Ga0070684_100203425 3300005535 Bacteria 1804
14 Ga0068856_100016602 3300005614 Bacteria 7127
15 Ga0068866_10090940 3300005718 Bacteria 1662
16 Ga0068866_10176915 3300005718 Bacteria 1257
17 Ga0068851_10071772 3300005834 Bacteria 1792
18 Ga0068863_100592159 3300005841 Bacteria 1097
19 Ga0081455_10004689 3300005937 Bacteria 15213
20 Ga0081455_10011668 3300005937 Bacteria 8812
21 Ga0081455_10017209 3300005937 Bacteria 6939
22 Ga0081455_10054334 3300005937 Bacteria 3414
23 Ga0081455_10222695 3300005937 Bacteria 1397
24 Ga0081539_10013084 3300005985 Bacteria 6291
25 Ga0070717_10009410 3300006028 Bacteria 7340
26 Ga0075365_10298715 3300006038 Bacteria 1133
27 Ga0070712_100097702 3300006175 Bacteria 2165
28 Ga0075428_100008596 3300006844 Bacteria 11323
29 Ga0075428_100885724 3300006844 Bacteria 947
30 Ga0075430_100116069 3300006846 Bacteria 2231
31 Ga0075433_10011151 3300006852 Bacteria 7230
32 Ga0075433_10108346 3300006852 Bacteria 2464
33 Ga0075433_10185999 3300006852 Bacteria 1848
34 Ga0075433_10312789 3300006852 Bacteria 1390
35 Ga0075433_10390603 3300006852 Bacteria 1228
36 Ga0075434_100001327 3300006871 Bacteria 20695
37 Ga0075434_100038794 3300006871 Bacteria 4720
38 Ga0068865_100269592 3300006881 Bacteria 1351
39 Ga0068865_100492176 3300006881 Bacteria 1021
40 Ga0075436_100105381 3300006914 Bacteria 1966
41 Ga0075436_100145889 3300006914 Bacteria 1664
42 Ga0075435_100009052 3300007076 Bacteria 7182
43 Ga0075435_100017987 3300007076 Bacteria 5360
44 Ga0111539_10038960 3300009094 Bacteria 5732
45 Ga0111539_10256246 3300009094 Bacteria 2037
46 Ga0111539_11397986 3300009094 Bacteria 812
47 Ga0105245_10070683 3300009098 Bacteria 3168
48 Ga0105245_10291424 3300009098 Bacteria 1599
49 Ga0105245_10296221 3300009098 Bacteria 1586
50 Ga0105245_10523396 3300009098 Bacteria 1205
51 Ga0114129_10313372 3300009147 Bacteria 2088
52 Ga0114129_11332570 3300009147 Bacteria 888
53 Ga0105243_10038521 3300009148 Bacteria 3723
54 Ga0105242_10495100 3300009176 Bacteria 1161
55 Ga0157369_10819222 3300013105 Bacteria 956
56 Ga0157374_10273129 3300013296 Bacteria 1667
57 Ga0163162_10139530 3300013306 Bacteria 2536
58 Ga0157375_10204895 3300013308 Bacteria 2129
59 Ga0157375_10630779 3300013308 Bacteria 1229
60 Ga0157375_10880111 3300013308 Bacteria 1041
61 Ga0163163_10581629 3300014325 Bacteria 1183
62 Ga0163163_10702703 3300014325 Bacteria 1075
63 Ga0163163_10859057 3300014325 Bacteria 971
64 Ga0163163_11043335 3300014325 Bacteria 881
65 Ga0182008_10081028 3300014497 Bacteria 1597
66 Ga0157377_10026789 3300014745 Bacteria 3089
67 Ga0157376_10447185 3300014969 Bacteria 1260
68 Ga0213876_10217828 3300021384 Unclassified 1015
69 Ga0207642_10078337 3300025899 Bacteria 1597
70 Ga0207684_10947993 3300025910 Bacteria 722
71 Ga0207687_10167822 3300025927 Bacteria 1690
72 Ga0207687_10192340 3300025927 Bacteria 1589
73 Ga0207687_10219462 3300025927 Bacteria 1496
74 Ga0207687_10723872 3300025927 Bacteria 846
75 Ga0207704_10022972 3300025938 Bacteria 3352
76 Ga0207691_10633551 3300025940 Bacteria 904
77 Ga0207711_10908737 3300025941 Bacteria 818
78 Ga0207661_10363245 3300025944 Bacteria 1308
79 Ga0207712_10762807 3300025961 Bacteria 848
80 Ga0207702_10096076 3300026078 Bacteria 2605
81 Ga0207641_10302260 3300026088 Bacteria 1512
82 Ga0207648_10554936 3300026089 Bacteria 1055
83 Ga0207648_10864143 3300026089 Bacteria 844
84 Ga0207683_10227799 3300026121 Bacteria 1699
85 Ga0207683_10343308 3300026121 Bacteria 1370
86 Ga0207428_10139808 3300027907 Bacteria 1849
87 Ga0207428_10212992 3300027907 Bacteria 1451
88 Ga0265327_10000332 3300031251 Bacteria 89606
89 Ga0265327_10104545 3300031251 Bacteria 1361
90 Ga0307408_100603520 3300031548 Bacteria 976
91 Ga0307410_10074552 3300031852 Bacteria 2363
92 Ga0307410_10352086 3300031852 Bacteria 1177
93 Ga0307406_10050664 3300031901 Bacteria 2633
94 Ga0307406_10396118 3300031901 Bacteria 1093
95 Ga0307412_10064632 3300031911 Bacteria 2473
96 Ga0307409_100010659 3300031995 Bacteria 5734
97 Ga0307416_100050226 3300032002 Bacteria 3323
98 Ga0307416_100197737 3300032002 Bacteria 1904
99 Ga0307416_100436178 3300032002 Bacteria 1359
100 Ga0307416_100614882 3300032002 Bacteria 1168
101 Ga0307416_100970944 3300032002 Bacteria 952
102 Ga0307411_10081449 3300032005 Bacteria 2229
103 Ga0307415_100003084 3300032126 Bacteria 8416
104 Ga0307415_100040700 3300032126 Unclassified 3081
105 Ga0307415_100135634 3300032126 Bacteria 1871
106 Ga0307415_100227766 3300032126 Bacteria 1499
107 Ga0307415_100385237 3300032126 Bacteria 1192
108 Ga0373934_0165259 3300035086 Bacteria 908
109 Ga0373943_0042411 3300035170 Bacteria 2205
110 Ga0373943_0311766 3300035170 Bacteria 895
111 Ga0373946_0022993 3300035171 Bacteria 2432
112 Ga0373946_0069065 3300035171 Bacteria 1521
113 Ga0373955_0047083 3300035172 Bacteria 2334
114 Ga0373933_0493189 3300035724 Bacteria 802
115 Ga0373947_0068240 3300035725 Bacteria 2174
116 Ga0373937_0004404 3300036401 Bacteria 11972
117 Ga0316582_0574090 3300036647 Bacteria 777
118 Ga0373925_0042021 3300037068 Bacteria 3391
119 Ga0373925_0239195 3300037068 Bacteria 1454
120 Ga0395899_0031841 3300037312 Bacteria 3962
121 Ga0395899_0032081 3300037312 Bacteria 3946
122 Ga0395899_0326588 3300037312 Bacteria 1032
123 Ga0395900_0012791 3300037418 Bacteria 8578
124 Ga0395900_0033930 3300037418 Bacteria 5253
125 Ga0395900_0392484 3300037418 Bacteria 1354
126 Ga0395900_0666742 3300037418 Bacteria 976
127 Ga0395900_1065546 3300037418 Bacteria 726
128 Ga0395898_0036773 3300037466 Bacteria 4860
129 Ga0395898_0036987 3300037466 Bacteria 4844
130 Ga0395898_0080665 3300037466 Bacteria 3138
131 Ga0395898_0143679 3300037466 Bacteria 2284
132 Ga0395898_0459074 3300037466 Bacteria 1213
133 Ga0395898_0695992 3300037466 Bacteria 958
134 Ga0395898_0896570 3300037466 Bacteria 825
135 Ga0395905_0038999 3300037471 Bacteria 4457
136 Ga0395905_0084827 3300037471 Bacteria 2968
137 Ga0395905_0151920 3300037471 Bacteria 2178
138 Ga0395905_0743093 3300037471 Unclassified 883
139 Ga0436364_1108648 3300037853 Bacteria 1805
140 Ga0395901_0007157 3300038443 Bacteria 11262
141 Ga0395901_0022206 3300038443 Bacteria 6503
142 Ga0395901_0032213 3300038443 Bacteria 5409
143 Ga0395901_0084983 3300038443 Bacteria 3308
144 Ga0395901_0097677 3300038443 Bacteria 3079
145 Ga0395901_0235257 3300038443 Bacteria 1912
146 Ga0395901_0247155 3300038443 Bacteria 1859
147 Ga0395901_0268785 3300038443 Bacteria 1774
148 Ga0395901_0447839 3300038443 Bacteria 1321
149 Ga0395901_0549560 3300038443 Bacteria 1170
150 Ga0395901_0881451 3300038443 Bacteria 878
151 Ga0436365_0064845 3300039437 Bacteria 1785
152 Ga0466972_0138150 3300044658 Bacteria 1147
153 Ga0466959_0193374 3300045049 Bacteria 1419
154 Ga0466967_0000169 3300045976 Bacteria 26794
155 Ga0466967_0447800 3300045976 Bacteria 1262
156 Ga0466967_0464605 3300045976 Bacteria 1238
157 Ga0466967_0634281 3300045976 Bacteria 1056
158 Ga0466967_0674062 3300045976 Bacteria 1023
159 Ga0495592_0083635 3300046454 Bacteria 2304
160 Ga0495592_0443927 3300046454 Bacteria 814
161 Ga0495629_0079612 3300046459 Bacteria 2288
162 Ga0495629_0127538 3300046459 Bacteria 1773
163 Ga0495629_0251019 3300046459 Bacteria 1217
164 Ga0495641_0043371 3300046461 Bacteria 2080
165 Ga0495641_0231276 3300046461 Bacteria 830
166 Ga0495653_0034482 3300046463 Bacteria 4004
167 Ga0495653_0058546 3300046463 Bacteria 2928
168 Ga0495580_0131509 3300046472 Bacteria 1736
169 Ga0495582_0041716 3300046473 Bacteria 2529
170 Ga0495582_0067630 3300046473 Bacteria 1974
171 Ga0495582_0128062 3300046473 Bacteria 1433
172 Ga0495664_0244673 3300046477 Bacteria 1085
173 Ga0495584_0072977 3300046491 Bacteria 1725
174 Ga0495594_0086626 3300046499 Bacteria 1753
175 Ga0495596_0089616 3300046500 Bacteria 1194
176 Ga0495607_0142673 3300046501 Bacteria 1234
177 Ga0495608_0041063 3300046511 Bacteria 3097
178 Ga0495608_0458412 3300046511 Bacteria 775
179 Ga0495620_0039439 3300046515 Bacteria 2087
180 Ga0495628_0220450 3300046516 Bacteria 1425
181 Ga0495630_0062620 3300046517 Bacteria 2794
182 Ga0495630_0109631 3300046517 Bacteria 2091
183 Ga0495630_0149345 3300046517 Bacteria 1778
184 Ga0495630_0196087 3300046517 Bacteria 1541
185 Ga0495644_0076642 3300046523 Bacteria 1260
186 Ga0495640_0273919 3300046533 Bacteria 1052
187 Ga0495586_0005201 3300046535 Bacteria 6964
188 Ga0495667_0007186 3300046559 Bacteria 7556
189 Ga0495656_0132818 3300046615 Bacteria 1186
190 Ga0495668_0070331 3300046616 Bacteria 1924
191 Ga0495634_0031248 3300046642 Bacteria 3669
192 Ga0495634_0074385 3300046642 Bacteria 2232
193 Ga0495635_0036764 3300046663 Bacteria 3392
194 Ga0495659_0007418 3300046664 Bacteria 3480
195 Ga0495657_0044156 3300046675 Bacteria 3034
196 Ga0495658_0131656 3300046683 Bacteria 1523
197 Ga0495613_0055009 3300046689 Bacteria 2925
198 Ga0495613_0115274 3300046689 Bacteria 1934
199 Ga0495624_0342281 3300046690 Bacteria 900
200 Ga0495670_0043366 3300046691 Bacteria 2245
201 Ga0495589_0026904 3300046794 Bacteria 2912
202 Ga0495589_0072607 3300046794 Bacteria 1680
203 Ga0495589_0182194 3300046794 Bacteria 996
204 Ga0495600_0140810 3300046809 Bacteria 1565
205 Ga0495636_0073675 3300047318 Bacteria 1461
206 Ga0495674_0039018 3300047319 Bacteria 4258
207 Ga0495674_0404813 3300047319 Bacteria 1101
208 Ga0495676_0009725 3300047321 Bacteria 8742
209 Ga0495676_0043303 3300047321 Bacteria 3687
210 Ga0495680_0019189 3300047322 Bacteria 5783
211 Ga0495680_0219727 3300047322 Bacteria 1357
212 Ga0495685_007056 3300047447 Bacteria 3700
213 Ga0495684_0352846 3300047471 Bacteria 1044
214 Ga0495593_0139971 3300047673 Bacteria 1226
215 Ga0495614_0055697 3300048089 Bacteria 1696
216 Ga0496100_0009519 3300048903 Bacteria 5461
217 Ga0496100_0083185 3300048903 Bacteria 2166
218 Ga0496100_0268893 3300048903 Bacteria 1267
219 Ga0496100_0304998 3300048903 Bacteria 1193
220 Ga0496101_0134316 3300048904 Bacteria 1881
221 Ga0496102_0039058 3300048905 Bacteria 4287
222 Ga0496104_0096299 3300048907 Bacteria 2831
223 Ga0496104_0111960 3300048907 Bacteria 2617
224 Ga0496104_0142073 3300048907 Bacteria 2306
225 Ga0496104_0242333 3300048907 Bacteria 1715
226 Ga0496104_0291051 3300048907 Bacteria 1546
227 Ga0496104_0387970 3300048907 Bacteria 1309
228 Ga0496105_0030473 3300048908 Bacteria 4420
229 Ga0496105_0114474 3300048908 Bacteria 2225
230 Ga0496105_0285234 3300048908 Bacteria 1330
231 Ga0496106_0005672 3300048909 Bacteria 9238
232 Ga0496107_0003343 3300048910 Bacteria 10714
233 Ga0496107_0241131 3300048910 Bacteria 1345
234 Ga0496107_0302863 3300048910 Bacteria 1190
235 Ga0496108_0012703 3300048911 Bacteria 6860
236 Ga0496108_0051374 3300048911 Bacteria 3453
237 Ga0496108_0152747 3300048911 Bacteria 1993
238 Ga0496108_0183970 3300048911 Bacteria 1810
239 Ga0496108_0315435 3300048911 Bacteria 1363
240 Ga0496108_0574535 3300048911 Bacteria 983
241 Ga0496109_0022842 3300048912 Bacteria 5543
242 Ga0496109_0026766 3300048912 Bacteria 5143
243 Ga0496109_0065702 3300048912 Bacteria 3321
244 Ga0496109_0100934 3300048912 Bacteria 2678
245 Ga0496109_0101229 3300048912 Bacteria 2674
246 Ga0496109_0274638 3300048912 Bacteria 1588
247 Ga0496109_0313649 3300048912 Bacteria 1480
248 Ga0496109_0644974 3300048912 Bacteria 996
249 Ga0496110_0005405 3300048913 Bacteria 10018
250 Ga0496110_0025785 3300048913 Bacteria 5026
251 Ga0496110_0039996 3300048913 Bacteria 4085
252 Ga0496110_0064279 3300048913 Bacteria 3242
253 Ga0496110_0282414 3300048913 Bacteria 1512
254 Ga0496110_0472285 3300048913 Bacteria 1143
255 Ga0496111_0015719 3300048914 Bacteria 5203
256 Ga0496111_0147632 3300048914 Bacteria 1744
257 Ga0496111_0506352 3300048914 Bacteria 888
258 Ga0496111_0568481 3300048914 Bacteria 831
259 Ga0496111_0613443 3300048914 Bacteria 796
260 Ga0496112_0000125 3300048915 Bacteria 47606
261 Ga0496112_0013069 3300048915 Bacteria 7659
262 Ga0496112_0138525 3300048915 Bacteria 2403
263 Ga0496112_0356942 3300048915 Bacteria 1404
264 Ga0496113_0006242 3300048916 Bacteria 7527
265 Ga0496113_0013079 3300048916 Bacteria 5604
266 Ga0496113_0127059 3300048916 Bacteria 1997
267 Ga0496113_0478757 3300048916 Bacteria 1000
268 Ga0496113_0540387 3300048916 Bacteria 935
269 Ga0496113_0552299 3300048916 Bacteria 924
270 Ga0496114_0043084 3300048917 Bacteria 3743
271 Ga0496114_0046319 3300048917 Bacteria 3614
272 Ga0496114_0137251 3300048917 Bacteria 2115
273 Ga0496114_0300063 3300048917 Bacteria 1418
274 Ga0496114_0537489 3300048917 Bacteria 1033
275 Ga0496114_0675179 3300048917 Bacteria 907
276 Ga0496115_0008245 3300048918 Bacteria 7701
277 Ga0501069_0491991 3300049585 Bacteria 731
278 nmdc:mga05p37_305912_c1 3300050507 Bacteria 1886
279 nmdc:mga05p37_355972_c1 3300050507 Bacteria 1722
280 nmdc:mga0qj67_748700_c1 3300050509 Bacteria 775
281 nmdc:mga06r32_678207_c1 3300050510 Bacteria 997
282 nmdc:mga08y16_64538_c1 3300050511 Bacteria 3824
283 nmdc:mga08y16_684666_c1 3300050511 Bacteria 1027
284 nmdc:mga0n895_26742_c1 3300050512 Bacteria 5470
285 nmdc:mga0n895_8437_c1 3300050512 Bacteria 8921
286 nmdc:mga0rr50_14745_c1 3300050513 Bacteria 5138
287 nmdc:mga0rr50_54164_c1 3300050513 Bacteria 2987
288 nmdc:mga0rr50_925899_c1 3300050513 Bacteria 743
289 nmdc:mga08x19_88649_c1 3300050514 Bacteria 2039
290 nmdc:mga08x19_94292_c1 3300050514 Bacteria 1979
291 nmdc:mga0a205_159111_c1 3300050515 Bacteria 2156
292 nmdc:mga0a205_1878_c1 3300050515 Bacteria 18204
293 nmdc:mga0a205_190772_c1 3300050515 Bacteria 1941
294 nmdc:mga0a205_79618_c1 3300050515 Bacteria 1309
295 Ga0495601_0068755 3300053077 Bacteria 2258
296 Ga0495595_0103314 3300053084 Bacteria 1377
297 Ga0500556_0000372 3300053104 Bacteria 32618
298 Ga0500616_0002083 3300053153 Bacteria 17489
299 2862575328 2862574272 Bacteria 10567477
300 Ga0395900_0003359
301 Ga0068868_100246972
302 Ga0070667_100460166
303 Ga0070714_100154832
304 Ga0070708_100068806
305 Ga0070678_100203118
306 Ga0070678_100275408
307 Ga0070678_100443333
308 Ga0068867_100560148
309 Ga0070698_100285982
310 Ga0070699_100137950
311 Ga0070699_100183888
312 Ga0070684_100203425
313 Ga0068856_100016602
314 Ga0068866_10090940
315 Ga0068866_10176915
316 Ga0068851_10071772
317 Ga0068863_100592159
318 Ga0081455_10004689
319 Ga0081455_10011668
320 Ga0081455_10017209
321 Ga0081455_10054334
322 Ga0081455_10222695
323 Ga0081539_10013084
324 Ga0070717_10009410
325 Ga0075365_10298715
326 Ga0070712_100097702
327 Ga0075428_100008596
328 Ga0075428_100885724
329 Ga0075430_100116069
330 Ga0075433_10011151
331 Ga0075433_10108346
332 Ga0075433_10185999
333 Ga0075433_10312789
334 Ga0075433_10390603
335 Ga0075434_100001327
336 Ga0075434_100038794
337 Ga0068865_100269592
338 Ga0068865_100492176
339 Ga0075436_100105381
340 Ga0075436_100145889
341 Ga0075435_100009052
342 Ga0075435_100017987
343 Ga0111539_10038960
344 Ga0111539_10256246
345 Ga0111539_11397986
346 Ga0105245_10070683
347 Ga0105245_10291424
348 Ga0105245_10296221
349 Ga0105245_10523396
350 Ga0114129_10313372
351 Ga0114129_11332570
352 Ga0105243_10038521
353 Ga0105242_10495100
354 Ga0157369_10819222
355 Ga0157374_10273129
356 Ga0163162_10139530
357 Ga0157375_10204895
358 Ga0157375_10630779
359 Ga0157375_10880111
360 Ga0163163_10581629
361 Ga0163163_10702703
362 Ga0163163_10859057
363 Ga0163163_11043335
364 Ga0182008_10081028
365 Ga0157377_10026789
366 Ga0157376_10447185
367 Ga0213876_10217828
368 Ga0207642_10078337
369 Ga0207684_10947993
370 Ga0207687_10167822
371 Ga0207687_10192340
372 Ga0207687_10219462
373 Ga0207687_10723872
374 Ga0207704_10022972
375 Ga0207691_10633551
376 Ga0207711_10908737
377 Ga0207661_10363245
378 Ga0207712_10762807
379 Ga0207702_10096076
380 Ga0207641_10302260
381 Ga0207648_10554936
382 Ga0207648_10864143
383 Ga0207683_10227799
384 Ga0207683_10343308
385 Ga0207428_10139808
386 Ga0207428_10212992
387 Ga0265327_10000332
388 Ga0265327_10104545
389 Ga0307408_100603520
390 Ga0307410_10074552
391 Ga0307410_10352086
392 Ga0307406_10050664
393 Ga0307406_10396118
394 Ga0307412_10064632
395 Ga0307409_100010659
396 Ga0307416_100050226
397 Ga0307416_100197737
398 Ga0307416_100436178
399 Ga0307416_100614882
400 Ga0307416_100970944
401 Ga0307411_10081449
402 Ga0307415_100003084
403 Ga0307415_100040700
404 Ga0307415_100135634
405 Ga0307415_100227766
406 Ga0307415_100385237
407 Ga0373934_0165259
408 Ga0373943_0042411
409 Ga0373943_0311766
410 Ga0373946_0022993
411 Ga0373946_0069065
412 Ga0373955_0047083
413 Ga0373933_0493189
414 Ga0373947_0068240
415 Ga0373937_0004404
416 Ga0316582_0574090
417 Ga0373925_0042021
418 Ga0373925_0239195
419 Ga0395899_0031841
420 Ga0395899_0032081
421 Ga0395899_0326588
422 Ga0395900_0012791
423 Ga0395900_0033930
424 Ga0395900_0392484
425 Ga0395900_0666742
426 Ga0395900_1065546
427 Ga0395898_0036773
428 Ga0395898_0036987
429 Ga0395898_0080665
430 Ga0395898_0143679
431 Ga0395898_0459074
432 Ga0395898_0695992
433 Ga0395898_0896570
434 Ga0395905_0038999
435 Ga0395905_0084827
436 Ga0395905_0151920
437 Ga0395905_0743093
438 Ga0436364_1108648
439 Ga0395901_0007157
440 Ga0395901_0022206
441 Ga0395901_0032213
442 Ga0395901_0084983
443 Ga0395901_0097677
444 Ga0395901_0235257
445 Ga0395901_0247155
446 Ga0395901_0268785
447 Ga0395901_0447839
448 Ga0395901_0549560
449 Ga0395901_0881451
450 Ga0436365_0064845
451 Ga0466972_0138150
452 Ga0466959_0193374
453 Ga0466967_0000169
454 Ga0466967_0447800
455 Ga0466967_0464605
456 Ga0466967_0634281
457 Ga0466967_0674062
458 Ga0495592_0083635
459 Ga0495592_0443927
460 Ga0495629_0079612
461 Ga0495629_0127538
462 Ga0495629_0251019
463 Ga0495641_0043371
464 Ga0495641_0231276
465 Ga0495653_0034482
466 Ga0495653_0058546
467 Ga0495580_0131509
468 Ga0495582_0041716
469 Ga0495582_0067630
470 Ga0495582_0128062
471 Ga0495664_0244673
472 Ga0495584_0072977
473 Ga0495594_0086626
474 Ga0495596_0089616
475 Ga0495607_0142673
476 Ga0495608_0041063
477 Ga0495608_0458412
478 Ga0495620_0039439
479 Ga0495628_0220450
480 Ga0495630_0062620
481 Ga0495630_0109631
482 Ga0495630_0149345
483 Ga0495630_0196087
484 Ga0495644_0076642
485 Ga0495640_0273919
486 Ga0495586_0005201
487 Ga0495667_0007186
488 Ga0495656_0132818
489 Ga0495668_0070331
490 Ga0495634_0031248
491 Ga0495634_0074385
492 Ga0495635_0036764
493 Ga0495659_0007418
494 Ga0495657_0044156
495 Ga0495658_0131656
496 Ga0495613_0055009
497 Ga0495613_0115274
498 Ga0495624_0342281
499 Ga0495670_0043366
500 Ga0495589_0026904
501 Ga0495589_0072607
502 Ga0495589_0182194
503 Ga0495600_0140810
504 Ga0495636_0073675
505 Ga0495674_0039018
506 Ga0495674_0404813
507 Ga0495676_0009725
508 Ga0495676_0043303
509 Ga0495680_0019189
510 Ga0495680_0219727
511 Ga0495685_007056
512 Ga0495684_0352846
513 Ga0495593_0139971
514 Ga0495614_0055697
515 Ga0496100_0009519
516 Ga0496100_0083185
517 Ga0496100_0268893
518 Ga0496100_0304998
519 Ga0496101_0134316
520 Ga0496102_0039058
521 Ga0496104_0096299
522 Ga0496104_0111960
523 Ga0496104_0142073
524 Ga0496104_0242333
525 Ga0496104_0291051
526 Ga0496104_0387970
527 Ga0496105_0030473
528 Ga0496105_0114474
529 Ga0496105_0285234
530 Ga0496106_0005672
531 Ga0496107_0003343
532 Ga0496107_0241131
533 Ga0496107_0302863
534 Ga0496108_0012703
535 Ga0496108_0051374
536 Ga0496108_0152747
537 Ga0496108_0183970
538 Ga0496108_0315435
539 Ga0496108_0574535
540 Ga0496109_0022842
541 Ga0496109_0026766
542 Ga0496109_0065702
543 Ga0496109_0100934
544 Ga0496109_0101229
545 Ga0496109_0274638
546 Ga0496109_0313649
547 Ga0496109_0644974
548 Ga0496110_0005405
549 Ga0496110_0025785
550 Ga0496110_0039996
551 Ga0496110_0064279
552 Ga0496110_0282414
553 Ga0496110_0472285
554 Ga0496111_0015719
555 Ga0496111_0147632
556 Ga0496111_0506352
557 Ga0496111_0568481
558 Ga0496111_0613443
559 Ga0496112_0000125
560 Ga0496112_0013069
561 Ga0496112_0138525
562 Ga0496112_0356942
563 Ga0496113_0006242
564 Ga0496113_0013079
565 Ga0496113_0127059
566 Ga0496113_0478757
567 Ga0496113_0540387
568 Ga0496113_0552299
569 Ga0496114_0043084
570 Ga0496114_0046319
571 Ga0496114_0137251
572 Ga0496114_0300063
573 Ga0496114_0537489
574 Ga0496114_0675179
575 Ga0496115_0008245
576 Ga0501069_0491991
577 nmdc:mga05p37_305912_c1
578 nmdc:mga05p37_355972_c1
579 nmdc:mga0qj67_748700_c1
580 nmdc:mga06r32_678207_c1
581 nmdc:mga08y16_64538_c1
582 nmdc:mga08y16_684666_c1
583 nmdc:mga0n895_26742_c1
584 nmdc:mga0n895_8437_c1
585 nmdc:mga0rr50_14745_c1
586 nmdc:mga0rr50_54164_c1
587 nmdc:mga0rr50_925899_c1
588 nmdc:mga08x19_88649_c1
589 nmdc:mga08x19_94292_c1
590 nmdc:mga0a205_159111_c1
591 nmdc:mga0a205_1878_c1
592 nmdc:mga0a205_190772_c1
593 nmdc:mga0a205_79618_c1
594 Ga0495601_0068755
595 Ga0495595_0103314
596 Ga0500556_0000372
597 Ga0500616_0002083
598 2862575328

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

188

248

0.94

PF00072

Response_reg

Response regulator receiver domain

43

161

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vim-assembly1.cif.gz_A the c-terminal dna binding domain of esrb from edwardsiella piscicida 1.011 146 189
7vim-assembly1.cif.gz_B-2 the c-terminal dna binding domain of esrb from edwardsiella piscicida 0.9976 146 189
8hnp-assembly1.cif.gz_B archaeal transcription factor mutant 0.9777 146 189
8hno-assembly1.cif.gz_B archaeal transcription factor wild type 0.9707 145 189
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9211 142 208
ID Description Score Start End Superfamily
1yioA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.934 145 208 1.10.10.10
1zn2A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9299 145 208 1.10.10.10
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9193 5 79 3.40.50.2300
af_Q2G2U6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9155 5 77 3.40.50.2300
1yioA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8899 145 208 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3N0DSD5-F1-model_v4 Response regulator 0.9824 5 132 GO:0000160
GO:0004016
GO:0009190
AF-A0A538JGH7-F1-model_v4 Response regulator 0.9808 3 130 GO:0000160
GO:0004016
GO:0009190
AF-A0A2D2A4K6-F1-model_v4 deleted 0.9788 5 209
AF-A0A538J270-F1-model_v4 Response regulator 0.9728 3 140 GO:0000160
GO:0004016
GO:0009190
AF-A0A0M8TF46-F1-model_v4 LuxR family transcriptional regulator 0.9715 15 100 GO:0000160

Map