F394602

General Info

Members Datasets Scaffolds Average Seq Length
299 155 598 387

Family's Representative Sequence

Representative Sequence 3300001977|JGI24746J21847_1000743|JGI24746J21847_10007434
Length 405
Sequence VRRLAILGSTGSIGQSALAVVDAHPSRLTVVSLAAGDNADLLADQVQRYQPKVAALATSEAVDRLRAVCGSGRSVTLVGGAEGLMAAATCPEADIVICASAGTAALEAVLAAIDAGKTIAIANKEILVMAGALVTDAARRKGVSILPIDSEHNAVHQCLHGRARSEIRRLILTASGGPFRCFSAEELGRVSPSQALKHPTWKMGRKITIDSATLMNKGLEVIEAHWLFDVSADQIDVVIHPQSIVHSLVELGDGSVIAQLGVTDMRLPIQYACSYPERWDALLPSLDLTRAGMLEFFPPEYDRFPCLKLAYQALRTGGTLPVVLNAANEIAVEAFLDGKLGFTSIPMVIERAMNGHISESVSTLETVRKVDRWARTYARERAGELLNSSLVLGDSDGRSGRGDGR

Samples

Sample ID Description Type Environment
1 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
104 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
110 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
115 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
116 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
138 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
139 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
140 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
149 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
150 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.35
Nodule 0
Rhizoplane 1
Rhizosphere 92.64
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1000743 3300001977 Bacteria 5011
2 Ga0065704_10112543 3300005289 Bacteria 1932
3 Ga0065712_10006008 3300005290 Bacteria 10089
4 Ga0065712_10082766 3300005290 Bacteria 2887
5 Ga0065715_10000628 3300005293 Bacteria 10818
6 Ga0065715_10001227 3300005293 Bacteria 9451
7 Ga0065715_10001923 3300005293 Bacteria 12252
8 Ga0065715_10107644 3300005293 Bacteria 2760
9 Ga0065707_10005738 3300005295 Bacteria 4887
10 Ga0065707_10006039 3300005295 Bacteria 3833
11 Ga0070676_10008541 3300005328 Bacteria 5521
12 Ga0070670_100076256 3300005331 Bacteria 2881
13 Ga0070670_100093743 3300005331 Bacteria 2582
14 Ga0070677_10073468 3300005333 Bacteria 1445
15 Ga0068869_100004888 3300005334 Bacteria 8384
16 Ga0068868_100009018 3300005338 Bacteria 7159
17 Ga0070689_100078854 3300005340 Bacteria 2582
18 Ga0070687_100001397 3300005343 Bacteria 8480
19 Ga0070669_100006106 3300005353 Bacteria 8693
20 Ga0070669_100029071 3300005353 Bacteria 3983
21 Ga0070669_100060715 3300005353 Bacteria 2777
22 Ga0070669_100106856 3300005353 Bacteria 2119
23 Ga0070669_100181667 3300005353 Bacteria 1646
24 Ga0070675_100002277 3300005354 Bacteria 14251
25 Ga0070675_100029634 3300005354 Bacteria 4415
26 Ga0070675_100044144 3300005354 Bacteria 3645
27 Ga0070671_100211692 3300005355 Bacteria 1644
28 Ga0070674_100003075 3300005356 Bacteria 9283
29 Ga0070674_100032793 3300005356 Bacteria 3451
30 Ga0070674_100033558 3300005356 Bacteria 3418
31 Ga0070674_100138300 3300005356 Bacteria 1825
32 Ga0070674_100147230 3300005356 Bacteria 1774
33 Ga0070673_100025726 3300005364 Bacteria 4336
34 Ga0070673_100083589 3300005364 Bacteria 2594
35 Ga0070673_100162047 3300005364 Bacteria 1903
36 Ga0070688_100061508 3300005365 Bacteria 2374
37 Ga0070659_100189462 3300005366 Bacteria 1690
38 Ga0070701_10029557 3300005438 Bacteria 2704
39 Ga0070694_100124152 3300005444 Bacteria 1856
40 Ga0070663_100027386 3300005455 Bacteria 3870
41 Ga0070678_100044435 3300005456 Bacteria 3172
42 Ga0070678_100099799 3300005456 Bacteria 2247
43 Ga0070662_100025283 3300005457 Bacteria 4098
44 Ga0068867_100073815 3300005459 Bacteria 2555
45 Ga0068867_100122542 3300005459 Bacteria 2011
46 Ga0070685_10056421 3300005466 Bacteria 2283
47 Ga0070707_100054472 3300005468 Bacteria 3835
48 Ga0070697_100254041 3300005536 Bacteria 1504
49 Ga0070672_100013757 3300005543 Bacteria 5722
50 Ga0070672_100124033 3300005543 Bacteria 2117
51 Ga0070672_100134200 3300005543 Bacteria 2037
52 Ga0070686_100005582 3300005544 Bacteria 6967
53 Ga0070695_100009577 3300005545 Bacteria 5771
54 Ga0070696_100019487 3300005546 Bacteria 4593
55 Ga0070665_100044484 3300005548 Bacteria 4458
56 Ga0070704_100052388 3300005549 Bacteria 2879
57 Ga0070704_100126989 3300005549 Bacteria 1969
58 Ga0070704_100180150 3300005549 Bacteria 1689
59 Ga0070664_100002436 3300005564 Bacteria 14964
60 Ga0068857_100275361 3300005577 Bacteria 1547
61 Ga0068857_100286144 3300005577 Bacteria 1517
62 Ga0070702_100128534 3300005615 Bacteria 1597
63 Ga0068859_100005220 3300005617 Bacteria 13200
64 Ga0068859_100006201 3300005617 Bacteria 12147
65 Ga0068859_100056452 3300005617 Bacteria 3952
66 Ga0068859_100263015 3300005617 Bacteria 1817
67 Ga0068864_100007637 3300005618 Bacteria 8907
68 Ga0068864_100022875 3300005618 Bacteria 5243
69 Ga0068864_100118420 3300005618 Bacteria 2365
70 Ga0068864_100126826 3300005618 Bacteria 2288
71 Ga0068861_100014068 3300005719 Bacteria 5611
72 Ga0068861_100129916 3300005719 Bacteria 2044
73 Ga0068870_10011052 3300005840 Bacteria 4170
74 Ga0068870_10032929 3300005840 Bacteria 2640
75 Ga0068870_10056867 3300005840 Bacteria 2089
76 Ga0068870_10106855 3300005840 Bacteria 1591
77 Ga0068858_100117630 3300005842 Bacteria 2484
78 Ga0068862_100011045 3300005844 Bacteria 7459
79 Ga0068862_100120218 3300005844 Bacteria 2315
80 Ga0081539_10000395 3300005985 Bacteria 93818
81 Ga0070716_100025053 3300006173 Bacteria 3179
82 Ga0075367_10024773 3300006178 Bacteria 3385
83 Ga0075367_10025717 3300006178 Bacteria 3331
84 Ga0075367_10033832 3300006178 Bacteria 2948
85 Ga0075366_10009426 3300006195 Bacteria 5448
86 Ga0075366_10024053 3300006195 Bacteria 3552
87 Ga0097621_100065232 3300006237 Bacteria 2996
88 Ga0075370_10122255 3300006353 Bacteria 1516
89 Ga0075428_100000005 3300006844 Bacteria 326130
90 Ga0075428_100004257 3300006844 Bacteria 15746
91 Ga0075428_100007236 3300006844 Bacteria 12292
92 Ga0075428_100015396 3300006844 Bacteria 8479
93 Ga0075428_100017105 3300006844 Bacteria 8010
94 Ga0075428_100026118 3300006844 Bacteria 6466
95 Ga0075430_100006351 3300006846 Bacteria 9967
96 Ga0075431_100002946 3300006847 Bacteria 16480
97 Ga0075431_100021584 3300006847 Bacteria 6586
98 Ga0075431_100026981 3300006847 Bacteria 5892
99 Ga0075431_100170167 3300006847 Bacteria 2239
100 Ga0075431_100175505 3300006847 Bacteria 2201
101 Ga0075433_10001107 3300006852 Bacteria 19455
102 Ga0075434_100026404 3300006871 Bacteria 5689
103 Ga0075434_100035526 3300006871 Bacteria 4927
104 Ga0075434_100056398 3300006871 Bacteria 3904
105 Ga0075429_100005510 3300006880 Bacteria 10899
106 Ga0075429_100005899 3300006880 Bacteria 10573
107 Ga0075429_100027522 3300006880 Bacteria 4935
108 Ga0068865_100003814 3300006881 Bacteria 9051
109 Ga0097620_100005219 3300006931 Bacteria 13200
110 Ga0097620_100006201 3300006931 Bacteria 12147
111 Ga0097620_100056452 3300006931 Bacteria 3952
112 Ga0097620_100262997 3300006931 Bacteria 1817
113 Ga0075435_100110592 3300007076 Bacteria 2285
114 Ga0111539_10000008 3300009094 Bacteria 382609
115 Ga0111539_10000302 3300009094 Bacteria 59849
116 Ga0111539_10000326 3300009094 Bacteria 58218
117 Ga0111539_10003133 3300009094 Bacteria 21884
118 Ga0111539_10012749 3300009094 Bacteria 10524
119 Ga0111539_10038464 3300009094 Bacteria 5770
120 Ga0111539_10283740 3300009094 Bacteria 1927
121 Ga0111539_10293468 3300009094 Bacteria 1892
122 Ga0105245_10206981 3300009098 Bacteria 1886
123 Ga0114129_10000690 3300009147 Bacteria 42700
124 Ga0114129_10001192 3300009147 Bacteria 34525
125 Ga0114129_10003812 3300009147 Bacteria 21254
126 Ga0114129_10004292 3300009147 Bacteria 20145
127 Ga0114129_10005506 3300009147 Bacteria 17904
128 Ga0114129_10036568 3300009147 Bacteria 6933
129 Ga0114129_10043662 3300009147 Bacteria 6307
130 Ga0114129_10178260 3300009147 Bacteria 2893
131 Ga0114129_10268920 3300009147 Bacteria 2281
132 Ga0105243_10063809 3300009148 Bacteria 2953
133 Ga0105248_10013495 3300009177 Bacteria 8995
134 Ga0105248_10081311 3300009177 Bacteria 3642
135 Ga0105248_10380272 3300009177 Bacteria 1590
136 Ga0105249_10005411 3300009553 Bacteria 11023
137 Ga0105249_10146793 3300009553 Bacteria 2267
138 Ga0105246_10003425 3300011119 Bacteria 9617
139 Ga0163162_10002177 3300013306 Bacteria 18385
140 Ga0157375_10200254 3300013308 Bacteria 2152
141 Ga0157375_10292252 3300013308 Bacteria 1793
142 Ga0163163_10024746 3300014325 Bacteria 5717
143 Ga0163163_10034304 3300014325 Bacteria 4913
144 Ga0157380_10001840 3300014326 Bacteria 14026
145 Ga0157380_10008472 3300014326 Bacteria 7345
146 Ga0157380_10239584 3300014326 Bacteria 1634
147 Ga0157377_10000451 3300014745 Bacteria 17701
148 Ga0157379_10013670 3300014968 Bacteria 7114
149 Ga0157376_10027365 3300014969 Bacteria 4518
150 Ga0207697_10000950 3300025315 Bacteria 16340
151 Ga0207682_10001456 3300025893 Bacteria 10931
152 Ga0207682_10003263 3300025893 Bacteria 7097
153 Ga0207682_10033229 3300025893 Bacteria 2076
154 Ga0207688_10000413 3300025901 Bacteria 20074
155 Ga0207688_10013940 3300025901 Bacteria 4370
156 Ga0207680_10028521 3300025903 Bacteria 3124
157 Ga0207645_10001137 3300025907 Bacteria 22015
158 Ga0207645_10046027 3300025907 Bacteria 2787
159 Ga0207643_10001360 3300025908 Bacteria 14114
160 Ga0207643_10005277 3300025908 Bacteria 6911
161 Ga0207643_10011334 3300025908 Bacteria 4814
162 Ga0207660_10276343 3300025917 Bacteria 1332
163 Ga0207662_10004839 3300025918 Bacteria 7123
164 Ga0207646_10014996 3300025922 Bacteria 7335
165 Ga0207646_10179027 3300025922 Bacteria 1915
166 Ga0207681_10155192 3300025923 Bacteria 1720
167 Ga0207650_10053312 3300025925 Bacteria 2997
168 Ga0207650_10118278 3300025925 Bacteria 2060
169 Ga0207650_10179479 3300025925 Bacteria 1687
170 Ga0207659_10008222 3300025926 Bacteria 6465
171 Ga0207659_10039244 3300025926 Bacteria 3300
172 Ga0207706_10001590 3300025933 Bacteria 22552
173 Ga0207706_10077849 3300025933 Bacteria 2916
174 Ga0207670_10056192 3300025936 Bacteria 2664
175 Ga0207669_10000457 3300025937 Bacteria 17831
176 Ga0207669_10008973 3300025937 Bacteria 4729
177 Ga0207691_10000690 3300025940 Bacteria 33386
178 Ga0207691_10007279 3300025940 Bacteria 10676
179 Ga0207711_10088799 3300025941 Bacteria 2714
180 Ga0207689_10001533 3300025942 Bacteria 21987
181 Ga0207689_10041351 3300025942 Bacteria 3814
182 Ga0207689_10218663 3300025942 Bacteria 1574
183 Ga0207651_10010504 3300025960 Bacteria 5135
184 Ga0207651_10041444 3300025960 Bacteria 3056
185 Ga0207703_10015529 3300026035 Bacteria 5937
186 Ga0207678_10034449 3300026067 Bacteria 4410
187 Ga0207708_10019311 3300026075 Bacteria 5136
188 Ga0207708_10032531 3300026075 Bacteria 3960
189 Ga0207708_10038180 3300026075 Bacteria 3658
190 Ga0207641_10030950 3300026088 Bacteria 4435
191 Ga0207648_10024509 3300026089 Bacteria 5384
192 Ga0207648_10037970 3300026089 Bacteria 4240
193 Ga0207648_10112858 3300026089 Bacteria 2386
194 Ga0207648_10197587 3300026089 Bacteria 1783
195 Ga0207676_10017830 3300026095 Bacteria 5151
196 Ga0207676_10119893 3300026095 Bacteria 2216
197 Ga0207676_10164919 3300026095 Bacteria 1924
198 Ga0207674_10193202 3300026116 Bacteria 1985
199 Ga0207675_100006567 3300026118 Bacteria 11006
200 Ga0207675_100011666 3300026118 Bacteria 8217
201 Ga0207675_100090111 3300026118 Bacteria 2883
202 Ga0207675_100117960 3300026118 Bacteria 2509
203 Ga0207675_100224563 3300026118 Bacteria 1810
204 Ga0207683_10004743 3300026121 Bacteria 11715
205 Ga0207683_10006808 3300026121 Bacteria 9788
206 Ga0207683_10031859 3300026121 Bacteria 4578
207 Ga0207428_10000019 3300027907 Bacteria 276945
208 Ga0207428_10000089 3300027907 Bacteria 127333
209 Ga0207428_10001618 3300027907 Bacteria 23381
210 Ga0207428_10002413 3300027907 Bacteria 18659
211 Ga0207428_10023436 3300027907 Bacteria 5191
212 Ga0268264_10036168 3300028381 Bacteria 4066
213 Ga0268264_10052939 3300028381 Bacteria 3386
214 Ga0307405_10007705 3300031731 Bacteria 5411
215 Ga0307413_10057874 3300031824 Bacteria 2373
216 Ga0307409_100012299 3300031995 Bacteria 5448
217 Ga0307416_100010358 3300032002 Bacteria 6153
218 Ga0307416_100088098 3300032002 Bacteria 2653
219 Ga0373923_0082227 3300035111 Bacteria 1398
220 Ga0373937_0009496 3300036401 Bacteria 8456
221 Ga0439462_0032310 3300042015 Bacteria 1387
222 Ga0450908_000426 3300042184 Bacteria 8128
223 Ga0495629_0256252 3300046459 Bacteria 1203
224 Ga0495653_0035208 3300046463 Bacteria 3953
225 Ga0495643_0005217 3300046522 Bacteria 8847
226 Ga0495598_0016694 3300046537 Bacteria 1879
227 Ga0495621_0008280 3300046539 Bacteria 3111
228 Ga0495588_0024821 3300046674 Bacteria 2981
229 Ga0495600_0172937 3300046809 Bacteria 1394
230 Ga0495672_0023068 3300047320 Bacteria 4035
231 Ga0496104_0052961 3300048907 Bacteria 3834
232 Ga0496105_0090650 3300048908 Bacteria 2525
233 Ga0496109_0080569 3300048912 Bacteria 3000
234 Ga0501031_0083048 3300049568 Bacteria 2088
235 Ga0501034_0009079 3300049571 Bacteria 10442
236 Ga0501039_0181300 3300049575 Bacteria 1656
237 Ga0501041_0073666 3300049577 Bacteria 2098
238 Ga0501042_0169955 3300049578 Bacteria 1573
239 Ga0501047_0037243 3300049581 Bacteria 4703
240 Ga0501071_0052415 3300049587 Bacteria 2942
241 Ga0501073_0040279 3300049589 Bacteria 3307
242 Ga0501074_0080730 3300049590 Bacteria 2333
243 Ga0501075_0035134 3300049591 Bacteria 3737
244 Ga0501075_0043151 3300049591 Bacteria 3382
245 Ga0501076_0012889 3300049592 Bacteria 6257
246 Ga0501076_0025214 3300049592 Bacteria 4601
247 Ga0501076_0027925 3300049592 Bacteria 4378
248 Ga0501080_0191727 3300049742 Bacteria 1878
249 Ga0501081_0022648 3300049743 Bacteria 4205
250 Ga0501044_0005862 3300049823 Bacteria 13610
251 Ga0501045_0055733 3300049824 Bacteria 2891
252 nmdc:mga03n38_81294_c1 3300050490 Bacteria 1523
253 nmdc:mga0k408_104562_c1 3300050493 Bacteria 1671
254 nmdc:mga0k408_30690_c1 3300050493 Bacteria 3066
255 nmdc:mga0k408_4313_c1 3300050493 Bacteria 7555
256 nmdc:mga06z11_46674_c1 3300050494 Bacteria 2197
257 nmdc:mga06z11_50375_c1 3300050494 Bacteria 2128
258 nmdc:mga07m45_35614_c1 3300050496 Bacteria 2295
259 nmdc:mga07m45_58192_c1 3300050496 Bacteria 2187
260 nmdc:mga05p37_119481_c1 3300050507 Bacteria 3238
261 nmdc:mga05p37_124474_c1 3300050507 Bacteria 3166
262 nmdc:mga05p37_13248_c1 3300050507 Bacteria 9872
263 nmdc:mga05p37_17662_c1 3300050507 Bacteria 8608
264 nmdc:mga05p37_252396_c1 3300050507 Bacteria 2115
265 nmdc:mga05p37_45349_c1 3300050507 Bacteria 5408
266 nmdc:mga05p37_46858_c1 3300050507 Bacteria 5315
267 nmdc:mga05p37_84118_c1 3300050507 Bacteria 3920
268 nmdc:mga09592_19076_c1 3300050508 Bacteria 5628
269 nmdc:mga09592_247958_c1 3300050508 Bacteria 1543
270 nmdc:mga09592_43849_c1 3300050508 Bacteria 3763
271 nmdc:mga09592_822_c1 3300050508 Bacteria 24008
272 nmdc:mga0qj67_26156_c1 3300050509 Bacteria 4516
273 nmdc:mga06r32_3661_c1 3300050510 Bacteria 13540
274 nmdc:mga08y16_11526_c1 3300050511 Bacteria 9290
275 nmdc:mga08y16_135_c1 3300050511 Bacteria 64253
276 nmdc:mga08y16_17_c1 3300050511 Bacteria 382598
277 nmdc:mga08y16_29541_c1 3300050511 Bacteria 5774
278 nmdc:mga08y16_36101_c1 3300050511 Bacteria 5190
279 nmdc:mga08y16_48290_c1 3300050511 Bacteria 4455
280 nmdc:mga08y16_493485_c1 3300050511 Bacteria 1245
281 nmdc:mga0n895_139912_c1 3300050512 Bacteria 2448
282 nmdc:mga0n895_222722_c1 3300050512 Bacteria 1915
283 nmdc:mga0n895_2678_c2 3300050512 Bacteria 12437
284 nmdc:mga0n895_5149_c1 3300050512 Bacteria 10873
285 nmdc:mga0rr50_14628_c1 3300050513 Bacteria 5153
286 nmdc:mga0rr50_80917_c1 3300050513 Bacteria 2505
287 nmdc:mga08x19_141440_c1 3300050514 Bacteria 1625
288 nmdc:mga0a205_15891_c1 3300050515 Bacteria 7042
289 nmdc:mga0a205_199277_c1 3300050515 Bacteria 1893
290 nmdc:mga0a205_28576_c1 3300050515 Bacteria 5333
291 nmdc:mga0a205_932_c1 3300050515 Bacteria 24152
292 Ga0500555_000560 3300053103 Bacteria 14765
293 Ga0500555_012562 3300053103 Bacteria 2438
294 Ga0500568_0001922 3300053139 Bacteria 12743
295 Ga0500616_0000468 3300053153 Bacteria 52556
296 Ga0500645_000401 3300053730 Bacteria 30362
297 Ga0501084_0159502 3300054114 Bacteria 1903
298 Ga0501084_0248437 3300054114 Bacteria 1502
299 Ga0530510_0059643 3300061734 Bacteria 2760
300 JGI24746J21847_1000743
301 Ga0065704_10112543
302 Ga0065712_10006008
303 Ga0065712_10082766
304 Ga0065715_10000628
305 Ga0065715_10001227
306 Ga0065715_10001923
307 Ga0065715_10107644
308 Ga0065707_10005738
309 Ga0065707_10006039
310 Ga0070676_10008541
311 Ga0070670_100076256
312 Ga0070670_100093743
313 Ga0070677_10073468
314 Ga0068869_100004888
315 Ga0068868_100009018
316 Ga0070689_100078854
317 Ga0070687_100001397
318 Ga0070669_100006106
319 Ga0070669_100029071
320 Ga0070669_100060715
321 Ga0070669_100106856
322 Ga0070669_100181667
323 Ga0070675_100002277
324 Ga0070675_100029634
325 Ga0070675_100044144
326 Ga0070671_100211692
327 Ga0070674_100003075
328 Ga0070674_100032793
329 Ga0070674_100033558
330 Ga0070674_100138300
331 Ga0070674_100147230
332 Ga0070673_100025726
333 Ga0070673_100083589
334 Ga0070673_100162047
335 Ga0070688_100061508
336 Ga0070659_100189462
337 Ga0070701_10029557
338 Ga0070694_100124152
339 Ga0070663_100027386
340 Ga0070678_100044435
341 Ga0070678_100099799
342 Ga0070662_100025283
343 Ga0068867_100073815
344 Ga0068867_100122542
345 Ga0070685_10056421
346 Ga0070707_100054472
347 Ga0070697_100254041
348 Ga0070672_100013757
349 Ga0070672_100124033
350 Ga0070672_100134200
351 Ga0070686_100005582
352 Ga0070695_100009577
353 Ga0070696_100019487
354 Ga0070665_100044484
355 Ga0070704_100052388
356 Ga0070704_100126989
357 Ga0070704_100180150
358 Ga0070664_100002436
359 Ga0068857_100275361
360 Ga0068857_100286144
361 Ga0070702_100128534
362 Ga0068859_100005220
363 Ga0068859_100006201
364 Ga0068859_100056452
365 Ga0068859_100263015
366 Ga0068864_100007637
367 Ga0068864_100022875
368 Ga0068864_100118420
369 Ga0068864_100126826
370 Ga0068861_100014068
371 Ga0068861_100129916
372 Ga0068870_10011052
373 Ga0068870_10032929
374 Ga0068870_10056867
375 Ga0068870_10106855
376 Ga0068858_100117630
377 Ga0068862_100011045
378 Ga0068862_100120218
379 Ga0081539_10000395
380 Ga0070716_100025053
381 Ga0075367_10024773
382 Ga0075367_10025717
383 Ga0075367_10033832
384 Ga0075366_10009426
385 Ga0075366_10024053
386 Ga0097621_100065232
387 Ga0075370_10122255
388 Ga0075428_100000005
389 Ga0075428_100004257
390 Ga0075428_100007236
391 Ga0075428_100015396
392 Ga0075428_100017105
393 Ga0075428_100026118
394 Ga0075430_100006351
395 Ga0075431_100002946
396 Ga0075431_100021584
397 Ga0075431_100026981
398 Ga0075431_100170167
399 Ga0075431_100175505
400 Ga0075433_10001107
401 Ga0075434_100026404
402 Ga0075434_100035526
403 Ga0075434_100056398
404 Ga0075429_100005510
405 Ga0075429_100005899
406 Ga0075429_100027522
407 Ga0068865_100003814
408 Ga0097620_100005219
409 Ga0097620_100006201
410 Ga0097620_100056452
411 Ga0097620_100262997
412 Ga0075435_100110592
413 Ga0111539_10000008
414 Ga0111539_10000302
415 Ga0111539_10000326
416 Ga0111539_10003133
417 Ga0111539_10012749
418 Ga0111539_10038464
419 Ga0111539_10283740
420 Ga0111539_10293468
421 Ga0105245_10206981
422 Ga0114129_10000690
423 Ga0114129_10001192
424 Ga0114129_10003812
425 Ga0114129_10004292
426 Ga0114129_10005506
427 Ga0114129_10036568
428 Ga0114129_10043662
429 Ga0114129_10178260
430 Ga0114129_10268920
431 Ga0105243_10063809
432 Ga0105248_10013495
433 Ga0105248_10081311
434 Ga0105248_10380272
435 Ga0105249_10005411
436 Ga0105249_10146793
437 Ga0105246_10003425
438 Ga0163162_10002177
439 Ga0157375_10200254
440 Ga0157375_10292252
441 Ga0163163_10024746
442 Ga0163163_10034304
443 Ga0157380_10001840
444 Ga0157380_10008472
445 Ga0157380_10239584
446 Ga0157377_10000451
447 Ga0157379_10013670
448 Ga0157376_10027365
449 Ga0207697_10000950
450 Ga0207682_10001456
451 Ga0207682_10003263
452 Ga0207682_10033229
453 Ga0207688_10000413
454 Ga0207688_10013940
455 Ga0207680_10028521
456 Ga0207645_10001137
457 Ga0207645_10046027
458 Ga0207643_10001360
459 Ga0207643_10005277
460 Ga0207643_10011334
461 Ga0207660_10276343
462 Ga0207662_10004839
463 Ga0207646_10014996
464 Ga0207646_10179027
465 Ga0207681_10155192
466 Ga0207650_10053312
467 Ga0207650_10118278
468 Ga0207650_10179479
469 Ga0207659_10008222
470 Ga0207659_10039244
471 Ga0207706_10001590
472 Ga0207706_10077849
473 Ga0207670_10056192
474 Ga0207669_10000457
475 Ga0207669_10008973
476 Ga0207691_10000690
477 Ga0207691_10007279
478 Ga0207711_10088799
479 Ga0207689_10001533
480 Ga0207689_10041351
481 Ga0207689_10218663
482 Ga0207651_10010504
483 Ga0207651_10041444
484 Ga0207703_10015529
485 Ga0207678_10034449
486 Ga0207708_10019311
487 Ga0207708_10032531
488 Ga0207708_10038180
489 Ga0207641_10030950
490 Ga0207648_10024509
491 Ga0207648_10037970
492 Ga0207648_10112858
493 Ga0207648_10197587
494 Ga0207676_10017830
495 Ga0207676_10119893
496 Ga0207676_10164919
497 Ga0207674_10193202
498 Ga0207675_100006567
499 Ga0207675_100011666
500 Ga0207675_100090111
501 Ga0207675_100117960
502 Ga0207675_100224563
503 Ga0207683_10004743
504 Ga0207683_10006808
505 Ga0207683_10031859
506 Ga0207428_10000019
507 Ga0207428_10000089
508 Ga0207428_10001618
509 Ga0207428_10002413
510 Ga0207428_10023436
511 Ga0268264_10036168
512 Ga0268264_10052939
513 Ga0307405_10007705
514 Ga0307413_10057874
515 Ga0307409_100012299
516 Ga0307416_100010358
517 Ga0307416_100088098
518 Ga0373923_0082227
519 Ga0373937_0009496
520 Ga0439462_0032310
521 Ga0450908_000426
522 Ga0495629_0256252
523 Ga0495653_0035208
524 Ga0495643_0005217
525 Ga0495598_0016694
526 Ga0495621_0008280
527 Ga0495588_0024821
528 Ga0495600_0172937
529 Ga0495672_0023068
530 Ga0496104_0052961
531 Ga0496105_0090650
532 Ga0496109_0080569
533 Ga0501031_0083048
534 Ga0501034_0009079
535 Ga0501039_0181300
536 Ga0501041_0073666
537 Ga0501042_0169955
538 Ga0501047_0037243
539 Ga0501071_0052415
540 Ga0501073_0040279
541 Ga0501074_0080730
542 Ga0501075_0035134
543 Ga0501075_0043151
544 Ga0501076_0012889
545 Ga0501076_0025214
546 Ga0501076_0027925
547 Ga0501080_0191727
548 Ga0501081_0022648
549 Ga0501044_0005862
550 Ga0501045_0055733
551 nmdc:mga03n38_81294_c1
552 nmdc:mga0k408_104562_c1
553 nmdc:mga0k408_30690_c1
554 nmdc:mga0k408_4313_c1
555 nmdc:mga06z11_46674_c1
556 nmdc:mga06z11_50375_c1
557 nmdc:mga07m45_35614_c1
558 nmdc:mga07m45_58192_c1
559 nmdc:mga05p37_119481_c1
560 nmdc:mga05p37_124474_c1
561 nmdc:mga05p37_13248_c1
562 nmdc:mga05p37_17662_c1
563 nmdc:mga05p37_252396_c1
564 nmdc:mga05p37_45349_c1
565 nmdc:mga05p37_46858_c1
566 nmdc:mga05p37_84118_c1
567 nmdc:mga09592_19076_c1
568 nmdc:mga09592_247958_c1
569 nmdc:mga09592_43849_c1
570 nmdc:mga09592_822_c1
571 nmdc:mga0qj67_26156_c1
572 nmdc:mga06r32_3661_c1
573 nmdc:mga08y16_11526_c1
574 nmdc:mga08y16_135_c1
575 nmdc:mga08y16_17_c1
576 nmdc:mga08y16_29541_c1
577 nmdc:mga08y16_36101_c1
578 nmdc:mga08y16_48290_c1
579 nmdc:mga08y16_493485_c1
580 nmdc:mga0n895_139912_c1
581 nmdc:mga0n895_222722_c1
582 nmdc:mga0n895_2678_c2
583 nmdc:mga0n895_5149_c1
584 nmdc:mga0rr50_14628_c1
585 nmdc:mga0rr50_80917_c1
586 nmdc:mga08x19_141440_c1
587 nmdc:mga0a205_15891_c1
588 nmdc:mga0a205_199277_c1
589 nmdc:mga0a205_28576_c1
590 nmdc:mga0a205_932_c1
591 Ga0500555_000560
592 Ga0500555_012562
593 Ga0500568_0001922
594 Ga0500616_0000468
595 Ga0500645_000401
596 Ga0501084_0159502
597 Ga0501084_0248437
598 Ga0530510_0059643

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08436

DXP_redisom_C

1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain

145

228

0.99

PF02670

DXP_reductoisom

1-deoxy-D-xylulose 5-phosphate reductoisomerase

4

131

0.98

PF13288

DXPR_C

DXP reductoisomerase C-terminal domain

260

377

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6mh5-assembly1.cif.gz_A crystal structure of 1-deoxy-d-xylulose-5-phosphate reductoisomerase from staphylococcus schleiferi in complex with fosmidomycin (fom) 0.9706 1 376
1r0k-assembly2.cif.gz_D crystal structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase from zymomonas mobilis 0.9699 2 382
1r0l-assembly2.cif.gz_C 1-deoxy-d-xylulose 5-phosphate reductoisomerase from zymomonas mobilis in complex with nadph 0.966 2 382
1r0l-assembly2.cif.gz_D 1-deoxy-d-xylulose 5-phosphate reductoisomerase from zymomonas mobilis in complex with nadph 0.9653 2 382
1r0l-assembly1.cif.gz_B 1-deoxy-d-xylulose 5-phosphate reductoisomerase from zymomonas mobilis in complex with nadph 0.9647 2 382
ID Description Score Start End Superfamily
4zn6B03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9925 302 385 1.10.1740.10
1q0hA03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9753 301 382 1.10.1740.10
af_A0A1D6MNI9_381_464_1.10.1740.10 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9751 303 380 1.10.1740.10
3zhyB03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9744 302 382 1.10.1740.10
af_I1MM97_67_222_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9653 2 149 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3N5YD20-F1-model_v4 1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC 1.1.1.267) 0.9812 123 386 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-A0A0C1K2K6-F1-model_v4 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) 0.9809 1 380 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-A0A2V6BSR9-F1-model_v4 1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC 1.1.1.267) 0.9794 203 386 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-A0A7C0YXH5-F1-model_v4 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) 0.9786 1 386 GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-A0A350D9B2-F1-model_v4 1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC 1.1.1.267) 0.9783 60 380 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402

Map