F394391

General Info

Members Datasets Scaffolds Average Seq Length
298 132 596 282

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_0801606|Ga0436360_0801606_50_985
Length 311
Sequence LERERDTPSRPWRIAIKLAAASHTEDGMDFGAFMFHTDYSMPIVALAQACEARGFESLWAPEHSHIPLSRKSPFPGGGDVPKMYYDAMDPFVILTAAAAATKTLKVGTGVCLVIQRDTIQTAKLAASLDQVSSGRFLFGIGGGWNQDEMEDHGTDFSTRFKHMREQVEAMTEIWTKEKPEYHGEIVNFPPMMTWPKPVQKPRPPVIVGGAFPWAARRAIRYGDGLIPQAPSAGSGSPEEFMPRLRQMAEEAGRDPQSLSVTLGGAPEDLDVLRRNRDLEVTRMTLRLPPAKEDEILPILDRWAKLIPQVKT

Samples

Sample ID Description Type Environment
1 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
30 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
69 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
70 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
71 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
72 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
73 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
74 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
75 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
76 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
77 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
78 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
82 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
88 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
89 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
90 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
93 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
94 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
95 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
96 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
97 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
102 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
103 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
108 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
114 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
115 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
127 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
128 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
129 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
130 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
131 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.33
Metatranscriptomes 0.67
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.34
Nodule 0
Rhizoplane 1.68
Rhizosphere 91.28
Stem 0
Stem Tuber 0
Unclassified 4.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436360_0801606 3300039438 Bacteria 1105
2 Ga0070683_100094133 3300005329 Bacteria 2815
3 Ga0070671_100025474 3300005355 Bacteria 4853
4 Ga0070688_100123827 3300005365 Unclassified 1735
5 Ga0070709_10030649 3300005434 Bacteria 3229
6 Ga0070709_10052203 3300005434 Bacteria 2568
7 Ga0070709_10100339 3300005434 Bacteria 1927
8 Ga0070709_10102927 3300005434 Bacteria 1905
9 Ga0070714_100065793 3300005435 Bacteria 3123
10 Ga0070714_100259922 3300005435 Bacteria 1608
11 Ga0070714_100293800 3300005435 Bacteria 1513
12 Ga0070713_100038730 3300005436 Bacteria 3865
13 Ga0070713_100043172 3300005436 Bacteria 3684
14 Ga0070713_100068987 3300005436 Bacteria 2980
15 Ga0070713_100075769 3300005436 Bacteria 2854
16 Ga0070713_100104700 3300005436 Bacteria 2457
17 Ga0070713_100219812 3300005436 Unclassified 1723
18 Ga0070713_100226595 3300005436 Bacteria 1697
19 Ga0070710_10002845 3300005437 Bacteria 8248
20 Ga0070710_10035987 3300005437 Bacteria 2703
21 Ga0070710_10078677 3300005437 Unclassified 1919
22 Ga0070711_100003756 3300005439 Bacteria 8906
23 Ga0070711_100038745 3300005439 Bacteria 3206
24 Ga0070711_100067378 3300005439 Bacteria 2511
25 Ga0070711_100133716 3300005439 Bacteria 1850
26 Ga0070711_100263700 3300005439 Bacteria 1356
27 Ga0070711_100330103 3300005439 Bacteria 1221
28 Ga0070711_100418997 3300005439 Bacteria 1091
29 Ga0070678_100034093 3300005456 Bacteria 3542
30 Ga0070706_100026573 3300005467 Bacteria 5326
31 Ga0070706_100074039 3300005467 Bacteria 3153
32 Ga0070706_100311140 3300005467 Bacteria 1469
33 Ga0070707_100009165 3300005468 Bacteria 9182
34 Ga0070707_100058878 3300005468 Bacteria 3684
35 Ga0070698_100003615 3300005471 Bacteria 16996
36 Ga0070698_100029819 3300005471 Bacteria 5661
37 Ga0070698_100030742 3300005471 Bacteria 5567
38 Ga0070698_100039850 3300005471 Bacteria 4831
39 Ga0070698_100042284 3300005471 Bacteria 4673
40 Ga0070698_100226103 3300005471 Bacteria 1804
41 Ga0070699_100249886 3300005518 Bacteria 1584
42 Ga0070699_100266110 3300005518 Bacteria 1534
43 Ga0070679_100083268 3300005530 Bacteria 3187
44 Ga0070697_100042158 3300005536 Bacteria 3693
45 Ga0068855_100770055 3300005563 Bacteria 1025
46 Ga0068856_100154956 3300005614 Bacteria 2301
47 Ga0068858_100700320 3300005842 Bacteria 986
48 Ga0081455_10331548 3300005937 Bacteria 1080
49 Ga0081540_1016760 3300005983 Bacteria 4567
50 Ga0070717_10041796 3300006028 Bacteria 3738
51 Ga0070717_10070560 3300006028 Bacteria 2912
52 Ga0070717_10101082 3300006028 Bacteria 2449
53 Ga0070712_100011693 3300006175 Bacteria 5575
54 Ga0070712_100036192 3300006175 Bacteria 3357
55 Ga0070712_100046938 3300006175 Bacteria 2987
56 Ga0070712_100072364 3300006175 Bacteria 2469
57 Ga0070712_100109912 3300006175 Bacteria 2055
58 Ga0070712_100194703 3300006175 Bacteria 1588
59 Ga0070712_100233529 3300006175 Bacteria 1462
60 Ga0075428_100157009 3300006844 Bacteria 2470
61 Ga0075430_100006658 3300006846 Bacteria 9745
62 Ga0075431_100009651 3300006847 Bacteria 9695
63 Ga0075433_10043285 3300006852 Bacteria 3907
64 Ga0075434_100122649 3300006871 Bacteria 2615
65 Ga0099794_10090072 3300007265 Bacteria 1521
66 Ga0099795_10001634 3300007788 Bacteria 4955
67 Ga0099795_10004063 3300007788 Bacteria 3726
68 Ga0099795_10041943 3300007788 Unclassified 1631
69 Ga0099795_10069645 3300007788 Bacteria 1324
70 Ga0105245_10083020 3300009098 Bacteria 2932
71 Ga0114129_10030731 3300009147 Bacteria 7596
72 Ga0105242_10212033 3300009176 Bacteria 1727
73 Ga0105248_10044129 3300009177 Bacteria 5000
74 Ga0099796_10010546 3300010159 Bacteria 2544
75 Ga0099796_10018335 3300010159 Bacteria 2100
76 Ga0099796_10033357 3300010159 Bacteria 1694
77 Ga0105239_10080792 3300010375 Bacteria 3577
78 Ga0105239_10141896 3300010375 Bacteria 2677
79 Ga0105246_10299559 3300011119 Unclassified 1297
80 Ga0163162_10115461 3300013306 Bacteria 2785
81 Ga0163162_10497279 3300013306 Bacteria 1350
82 Ga0157375_10704056 3300013308 Unclassified 1164
83 Ga0163163_10154382 3300014325 Unclassified 2339
84 Ga0163163_10197618 3300014325 Unclassified 2059
85 Ga0182008_10028264 3300014497 Bacteria 2836
86 Ga0157379_10058912 3300014968 Bacteria 3434
87 Ga0157376_10058555 3300014969 Bacteria 3227
88 Ga0213873_10023218 3300021358 Bacteria 1476
89 Ga0213873_10025095 3300021358 Bacteria 1436
90 Ga0213873_10042145 3300021358 Bacteria 1179
91 Ga0213876_10200769 3300021384 Bacteria 1060
92 Ga0213875_10001717 3300021388 Bacteria 13758
93 Ga0213875_10008122 3300021388 Bacteria 5388
94 Ga0213875_10043329 3300021388 Bacteria 2114
95 Ga0213875_10056976 3300021388 Bacteria 1831
96 Ga0213875_10118913 3300021388 Bacteria 1235
97 Ga0207426_1015664 3300025302 Bacteria 2744
98 Ga0207692_10014065 3300025898 Bacteria 3488
99 Ga0207692_10053757 3300025898 Bacteria 2053
100 Ga0207692_10144506 3300025898 Unclassified 1356
101 Ga0207688_10116201 3300025901 Bacteria 1557
102 Ga0207699_10062982 3300025906 Bacteria 2238
103 Ga0207684_10147456 3300025910 Bacteria 2024
104 Ga0207684_10258121 3300025910 Bacteria 1503
105 Ga0207693_10001157 3300025915 Bacteria 23537
106 Ga0207693_10002330 3300025915 Bacteria 16500
107 Ga0207693_10011523 3300025915 Bacteria 7151
108 Ga0207693_10029177 3300025915 Bacteria 4360
109 Ga0207693_10038863 3300025915 Bacteria 3746
110 Ga0207693_10046578 3300025915 Bacteria 3406
111 Ga0207693_10051902 3300025915 Bacteria 3216
112 Ga0207693_10076122 3300025915 Bacteria 2628
113 Ga0207693_10080294 3300025915 Bacteria 2553
114 Ga0207693_10083419 3300025915 Bacteria 2503
115 Ga0207693_10201551 3300025915 Bacteria 1565
116 Ga0207693_10319192 3300025915 Bacteria 1216
117 Ga0207693_10356330 3300025915 Bacteria 1145
118 Ga0207663_10125038 3300025916 Bacteria 1768
119 Ga0207663_10159437 3300025916 Bacteria 1591
120 Ga0207663_10268268 3300025916 Bacteria 1263
121 Ga0207660_10269449 3300025917 Bacteria 1349
122 Ga0207652_10053058 3300025921 Bacteria 3482
123 Ga0207646_10005709 3300025922 Bacteria 13053
124 Ga0207687_10024710 3300025927 Bacteria 4016
125 Ga0207700_10023056 3300025928 Bacteria 4283
126 Ga0207700_10031670 3300025928 Bacteria 3760
127 Ga0207700_10188241 3300025928 Bacteria 1733
128 Ga0207700_10260022 3300025928 Bacteria 1486
129 Ga0207700_10293965 3300025928 Bacteria 1401
130 Ga0207700_10315401 3300025928 Bacteria 1354
131 Ga0207700_10372502 3300025928 Bacteria 1247
132 Ga0207700_10477206 3300025928 Bacteria 1102
133 Ga0207664_10034819 3300025929 Bacteria 3881
134 Ga0207664_10039372 3300025929 Bacteria 3671
135 Ga0207664_10062767 3300025929 Bacteria 2968
136 Ga0207664_10345207 3300025929 Bacteria 1317
137 Ga0207664_10409874 3300025929 Unclassified 1206
138 Ga0207686_10189157 3300025934 Bacteria 1466
139 Ga0207691_10350462 3300025940 Bacteria 1263
140 Ga0207711_10066572 3300025941 Bacteria 3115
141 Ga0207711_10311687 3300025941 Bacteria 1453
142 Ga0207667_10687431 3300025949 Bacteria 1026
143 Ga0207702_10119205 3300026078 Bacteria 2359
144 Ga0207702_10583929 3300026078 Bacteria 1095
145 Ga0207683_10049426 3300026121 Bacteria 3682
146 Ga0209179_1008976 3300027512 Bacteria 1700
147 Ga0268266_10297324 3300028379 Bacteria 1505
148 Ga0373926_0101492 3300035083 Bacteria 1076
149 Ga0373934_0063152 3300035086 Bacteria 1477
150 Ga0373944_0035811 3300035089 Bacteria 1514
151 Ga0373944_0045647 3300035089 Bacteria 1368
152 Ga0373923_0009171 3300035111 Bacteria 3560
153 Ga0373923_0023660 3300035111 Bacteria 2418
154 Ga0373923_0057615 3300035111 Bacteria 1643
155 Ga0373923_0148599 3300035111 Bacteria 1063
156 Ga0373936_0053163 3300035113 Bacteria 1642
157 Ga0373936_0080659 3300035113 Bacteria 1354
158 Ga0373953_0010931 3300035117 Bacteria 3173
159 Ga0373953_0027226 3300035117 Unclassified 2196
160 Ga0373954_0005245 3300035118 Bacteria 5600
161 Ga0373956_0021544 3300035119 Bacteria 2749
162 Ga0373956_0167626 3300035119 Bacteria 1036
163 Ga0373943_0086444 3300035170 Bacteria 1617
164 Ga0373943_0141918 3300035170 Bacteria 1295
165 Ga0373946_0050366 3300035171 Bacteria 1740
166 Ga0373924_0059102 3300035410 Bacteria 1601
167 Ga0373935_0015942 3300035692 Bacteria 4548
168 Ga0373935_0045467 3300035692 Bacteria 2771
169 Ga0373935_0167112 3300035692 Bacteria 1503
170 Ga0373927_0081188 3300035695 Bacteria 2101
171 Ga0373927_0088287 3300035695 Bacteria 2013
172 Ga0373933_0014311 3300035724 Bacteria 4411
173 Ga0373933_0047141 3300035724 Bacteria 2561
174 Ga0373933_0047418 3300035724 Bacteria 2555
175 Ga0373933_0047793 3300035724 Bacteria 2546
176 Ga0373933_0133660 3300035724 Bacteria 1561
177 Ga0373947_0030239 3300035725 Bacteria 3182
178 Ga0373947_0155483 3300035725 Bacteria 1476
179 Ga0373947_0223436 3300035725 Bacteria 1238
180 Ga0373937_0000615 3300036401 Bacteria 31351
181 Ga0373937_0017449 3300036401 Bacteria 6396
182 Ga0373937_0024353 3300036401 Bacteria 5458
183 Ga0373937_0028618 3300036401 Bacteria 5044
184 Ga0373937_0034684 3300036401 Bacteria 4590
185 Ga0373937_0036759 3300036401 Bacteria 4463
186 Ga0373937_0039173 3300036401 Bacteria 4319
187 Ga0373937_0061667 3300036401 Bacteria 3447
188 Ga0373937_0136767 3300036401 Bacteria 2291
189 Ga0373937_0143446 3300036401 Bacteria 2234
190 Ga0373937_0195022 3300036401 Bacteria 1903
191 Ga0373937_0195091 3300036401 Bacteria 1903
192 Ga0373937_0290140 3300036401 Bacteria 1546
193 Ga0373925_0035682 3300037068 Bacteria 3670
194 Ga0373925_0106770 3300037068 Bacteria 2159
195 Ga0373925_0114484 3300037068 Bacteria 2087
196 Ga0373925_0464638 3300037068 Bacteria 1037
197 Ga0436364_0423241 3300037853 Bacteria 33812
198 Ga0436364_0678828 3300037853 Bacteria 4520
199 Ga0436364_0960481 3300037853 Bacteria 3628
200 Ga0436364_1043221 3300037853 Bacteria 42769
201 Ga0436364_1181890 3300037853 Bacteria 3021
202 Ga0436365_0155563 3300039437 Bacteria 1209
203 Ga0436365_0272779 3300039437 Bacteria 4800
204 Ga0436365_1317309 3300039437 Bacteria 985
205 Ga0436365_1496798 3300039437 Bacteria 8641
206 Ga0436360_0917138 3300039438 Bacteria 2293
207 Ga0436360_1369302 3300039438 Bacteria 1909
208 Ga0436361_0005232 3300039447 Bacteria 1753
209 Ga0436361_0041059 3300039447 Bacteria 1403
210 Ga0436361_0105506 3300039447 Bacteria 1058
211 Ga0436361_0158869 3300039447 Bacteria 1072
212 Ga0436361_0911651 3300039447 Bacteria 3155
213 Ga0436363_0428206 3300039450 Bacteria 1144
214 Ga0436363_0759687 3300039450 Bacteria 2647
215 Ga0436363_1130473 3300039450 Bacteria 1221
216 Ga0436363_1151663 3300039450 Bacteria 1207
217 Ga0436363_1573385 3300039450 Bacteria 3886
218 Ga0436362_0211145 3300039453 Bacteria 1674
219 Ga0436362_0367477 3300039453 Bacteria 2431
220 Ga0436362_0419601 3300039453 Bacteria 3885
221 Ga0436362_0487426 3300039453 Bacteria 7146
222 Ga0436362_0886656 3300039453 Bacteria 1456
223 Ga0436362_0890483 3300039453 Bacteria 1790
224 Ga0436362_1154253 3300039453 Bacteria 990
225 Ga0436362_1285842 3300039453 Bacteria 1884
226 Ga0466963_0205123 3300044694 Bacteria 1379
227 Ga0451576_0042291 3300045051 Unclassified 4811
228 Ga0495592_0052223 3300046454 Bacteria 3036
229 Ga0495592_0068734 3300046454 Bacteria 2585
230 Ga0495592_0085378 3300046454 Bacteria 2276
231 Ga0495651_0005809 3300046462 Bacteria 9414
232 Ga0495651_0031400 3300046462 Bacteria 4142
233 Ga0495651_0177931 3300046462 Bacteria 1508
234 Ga0495653_0104801 3300046463 Bacteria 2043
235 Ga0495580_0060956 3300046472 Bacteria 2650
236 Ga0495664_0086453 3300046477 Bacteria 1883
237 Ga0495664_0188108 3300046477 Bacteria 1252
238 Ga0495608_0021549 3300046511 Bacteria 4422
239 Ga0495628_0012886 3300046516 Bacteria 7040
240 Ga0495628_0119224 3300046516 Bacteria 2025
241 Ga0495652_0078031 3300046529 Bacteria 2743
242 Ga0495640_0031022 3300046533 Bacteria 3820
243 Ga0495640_0102136 3300046533 Bacteria 1882
244 Ga0495640_0144418 3300046533 Bacteria 1532
245 Ga0495586_0040492 3300046535 Bacteria 2507
246 Ga0495587_0003199 3300046536 Bacteria 10942
247 Ga0495587_0017848 3300046536 Bacteria 4402
248 Ga0495645_0005028 3300046543 Bacteria 9062
249 Ga0495667_0038040 3300046559 Bacteria 3205
250 Ga0495667_0081316 3300046559 Bacteria 2106
251 Ga0495667_0083004 3300046559 Bacteria 2081
252 Ga0495667_0092665 3300046559 Bacteria 1956
253 Ga0495667_0245078 3300046559 Bacteria 1141
254 Ga0495667_0405489 3300046559 Bacteria 858
255 Ga0495635_0096007 3300046663 Bacteria 2026
256 Ga0495635_0149065 3300046663 Bacteria 1592
257 Ga0495657_0073845 3300046675 Bacteria 2220
258 Ga0495599_0018826 3300046678 Bacteria 4304
259 Ga0495599_0215974 3300046678 Bacteria 1175
260 Ga0495646_0032837 3300046680 Bacteria 3228
261 Ga0495600_0050336 3300046809 Bacteria 2718
262 Ga0495604_0089636 3300047317 Bacteria 2286
263 Ga0495674_0002371 3300047319 Bacteria 18433
264 Ga0495674_0139034 3300047319 Bacteria 2042
265 Ga0495674_0355444 3300047319 Bacteria 1188
266 Ga0495680_0069938 3300047322 Bacteria 2677
267 Ga0495680_0255236 3300047322 Bacteria 1241
268 Ga0495680_0347734 3300047322 Bacteria 1033
269 Ga0495675_0023400 3300047444 Bacteria 3935
270 Ga0495675_0118405 3300047444 Bacteria 1650
271 Ga0495684_0013692 3300047471 Bacteria 6246
272 Ga0495602_0002986 3300048088 Bacteria 17343
273 Ga0495602_0031832 3300048088 Bacteria 4978
274 Ga0495602_0059900 3300048088 Bacteria 3321
275 Ga0495602_0172893 3300048088 Bacteria 1675
276 Ga0496108_0509323 3300048911 Unclassified 1051
277 Ga0496109_0392253 3300048912 Bacteria 1312
278 Ga0496109_0666580 3300048912 Bacteria 977
279 Ga0496110_0260622 3300048913 Bacteria 1578
280 Ga0496112_0100193 3300048915 Bacteria 2867
281 Ga0501034_0022831 3300049571 Bacteria 6373
282 Ga0501068_0027578 3300049584 Bacteria 3354
283 Ga0501070_0184995 3300049586 Bacteria 1714
284 Ga0501044_0005641 3300049823 Bacteria 13898
285 nmdc:mga05p37_10313_c1 3300050507 Bacteria 11096
286 nmdc:mga06r32_26143_c1 3300050510 Bacteria 5439
287 nmdc:mga0n895_393782_c1 3300050512 Bacteria 1401
288 nmdc:mga08x19_21205_c1 3300050514 Bacteria 4007
289 nmdc:mga0a205_39921_c1 3300050515 Bacteria 4518
290 Ga0495612_0000454 3300053078 Bacteria 16407
291 Ga0495612_0121493 3300053078 Bacteria 1124
292 Ga0495619_0007916 3300053085 Bacteria 6724
293 Ga0495619_0022329 3300053085 Bacteria 4048
294 Ga0495619_0022833 3300053085 Bacteria 4006
295 Ga0495619_0085239 3300053085 Bacteria 2133
296 Ga0495619_0330827 3300053085 Bacteria 1054
297 Ga0587083_0003438 3300059505 Unclassified 2100
298 Ga0587088_019684 3300059508 Bacteria 1112
299 Ga0436360_0801606
300 Ga0070683_100094133
301 Ga0070671_100025474
302 Ga0070688_100123827
303 Ga0070709_10030649
304 Ga0070709_10052203
305 Ga0070709_10100339
306 Ga0070709_10102927
307 Ga0070714_100065793
308 Ga0070714_100259922
309 Ga0070714_100293800
310 Ga0070713_100038730
311 Ga0070713_100043172
312 Ga0070713_100068987
313 Ga0070713_100075769
314 Ga0070713_100104700
315 Ga0070713_100219812
316 Ga0070713_100226595
317 Ga0070710_10002845
318 Ga0070710_10035987
319 Ga0070710_10078677
320 Ga0070711_100003756
321 Ga0070711_100038745
322 Ga0070711_100067378
323 Ga0070711_100133716
324 Ga0070711_100263700
325 Ga0070711_100330103
326 Ga0070711_100418997
327 Ga0070678_100034093
328 Ga0070706_100026573
329 Ga0070706_100074039
330 Ga0070706_100311140
331 Ga0070707_100009165
332 Ga0070707_100058878
333 Ga0070698_100003615
334 Ga0070698_100029819
335 Ga0070698_100030742
336 Ga0070698_100039850
337 Ga0070698_100042284
338 Ga0070698_100226103
339 Ga0070699_100249886
340 Ga0070699_100266110
341 Ga0070679_100083268
342 Ga0070697_100042158
343 Ga0068855_100770055
344 Ga0068856_100154956
345 Ga0068858_100700320
346 Ga0081455_10331548
347 Ga0081540_1016760
348 Ga0070717_10041796
349 Ga0070717_10070560
350 Ga0070717_10101082
351 Ga0070712_100011693
352 Ga0070712_100036192
353 Ga0070712_100046938
354 Ga0070712_100072364
355 Ga0070712_100109912
356 Ga0070712_100194703
357 Ga0070712_100233529
358 Ga0075428_100157009
359 Ga0075430_100006658
360 Ga0075431_100009651
361 Ga0075433_10043285
362 Ga0075434_100122649
363 Ga0099794_10090072
364 Ga0099795_10001634
365 Ga0099795_10004063
366 Ga0099795_10041943
367 Ga0099795_10069645
368 Ga0105245_10083020
369 Ga0114129_10030731
370 Ga0105242_10212033
371 Ga0105248_10044129
372 Ga0099796_10010546
373 Ga0099796_10018335
374 Ga0099796_10033357
375 Ga0105239_10080792
376 Ga0105239_10141896
377 Ga0105246_10299559
378 Ga0163162_10115461
379 Ga0163162_10497279
380 Ga0157375_10704056
381 Ga0163163_10154382
382 Ga0163163_10197618
383 Ga0182008_10028264
384 Ga0157379_10058912
385 Ga0157376_10058555
386 Ga0213873_10023218
387 Ga0213873_10025095
388 Ga0213873_10042145
389 Ga0213876_10200769
390 Ga0213875_10001717
391 Ga0213875_10008122
392 Ga0213875_10043329
393 Ga0213875_10056976
394 Ga0213875_10118913
395 Ga0207426_1015664
396 Ga0207692_10014065
397 Ga0207692_10053757
398 Ga0207692_10144506
399 Ga0207688_10116201
400 Ga0207699_10062982
401 Ga0207684_10147456
402 Ga0207684_10258121
403 Ga0207693_10001157
404 Ga0207693_10002330
405 Ga0207693_10011523
406 Ga0207693_10029177
407 Ga0207693_10038863
408 Ga0207693_10046578
409 Ga0207693_10051902
410 Ga0207693_10076122
411 Ga0207693_10080294
412 Ga0207693_10083419
413 Ga0207693_10201551
414 Ga0207693_10319192
415 Ga0207693_10356330
416 Ga0207663_10125038
417 Ga0207663_10159437
418 Ga0207663_10268268
419 Ga0207660_10269449
420 Ga0207652_10053058
421 Ga0207646_10005709
422 Ga0207687_10024710
423 Ga0207700_10023056
424 Ga0207700_10031670
425 Ga0207700_10188241
426 Ga0207700_10260022
427 Ga0207700_10293965
428 Ga0207700_10315401
429 Ga0207700_10372502
430 Ga0207700_10477206
431 Ga0207664_10034819
432 Ga0207664_10039372
433 Ga0207664_10062767
434 Ga0207664_10345207
435 Ga0207664_10409874
436 Ga0207686_10189157
437 Ga0207691_10350462
438 Ga0207711_10066572
439 Ga0207711_10311687
440 Ga0207667_10687431
441 Ga0207702_10119205
442 Ga0207702_10583929
443 Ga0207683_10049426
444 Ga0209179_1008976
445 Ga0268266_10297324
446 Ga0373926_0101492
447 Ga0373934_0063152
448 Ga0373944_0035811
449 Ga0373944_0045647
450 Ga0373923_0009171
451 Ga0373923_0023660
452 Ga0373923_0057615
453 Ga0373923_0148599
454 Ga0373936_0053163
455 Ga0373936_0080659
456 Ga0373953_0010931
457 Ga0373953_0027226
458 Ga0373954_0005245
459 Ga0373956_0021544
460 Ga0373956_0167626
461 Ga0373943_0086444
462 Ga0373943_0141918
463 Ga0373946_0050366
464 Ga0373924_0059102
465 Ga0373935_0015942
466 Ga0373935_0045467
467 Ga0373935_0167112
468 Ga0373927_0081188
469 Ga0373927_0088287
470 Ga0373933_0014311
471 Ga0373933_0047141
472 Ga0373933_0047418
473 Ga0373933_0047793
474 Ga0373933_0133660
475 Ga0373947_0030239
476 Ga0373947_0155483
477 Ga0373947_0223436
478 Ga0373937_0000615
479 Ga0373937_0017449
480 Ga0373937_0024353
481 Ga0373937_0028618
482 Ga0373937_0034684
483 Ga0373937_0036759
484 Ga0373937_0039173
485 Ga0373937_0061667
486 Ga0373937_0136767
487 Ga0373937_0143446
488 Ga0373937_0195022
489 Ga0373937_0195091
490 Ga0373937_0290140
491 Ga0373925_0035682
492 Ga0373925_0106770
493 Ga0373925_0114484
494 Ga0373925_0464638
495 Ga0436364_0423241
496 Ga0436364_0678828
497 Ga0436364_0960481
498 Ga0436364_1043221
499 Ga0436364_1181890
500 Ga0436365_0155563
501 Ga0436365_0272779
502 Ga0436365_1317309
503 Ga0436365_1496798
504 Ga0436360_0917138
505 Ga0436360_1369302
506 Ga0436361_0005232
507 Ga0436361_0041059
508 Ga0436361_0105506
509 Ga0436361_0158869
510 Ga0436361_0911651
511 Ga0436363_0428206
512 Ga0436363_0759687
513 Ga0436363_1130473
514 Ga0436363_1151663
515 Ga0436363_1573385
516 Ga0436362_0211145
517 Ga0436362_0367477
518 Ga0436362_0419601
519 Ga0436362_0487426
520 Ga0436362_0886656
521 Ga0436362_0890483
522 Ga0436362_1154253
523 Ga0436362_1285842
524 Ga0466963_0205123
525 Ga0451576_0042291
526 Ga0495592_0052223
527 Ga0495592_0068734
528 Ga0495592_0085378
529 Ga0495651_0005809
530 Ga0495651_0031400
531 Ga0495651_0177931
532 Ga0495653_0104801
533 Ga0495580_0060956
534 Ga0495664_0086453
535 Ga0495664_0188108
536 Ga0495608_0021549
537 Ga0495628_0012886
538 Ga0495628_0119224
539 Ga0495652_0078031
540 Ga0495640_0031022
541 Ga0495640_0102136
542 Ga0495640_0144418
543 Ga0495586_0040492
544 Ga0495587_0003199
545 Ga0495587_0017848
546 Ga0495645_0005028
547 Ga0495667_0038040
548 Ga0495667_0081316
549 Ga0495667_0083004
550 Ga0495667_0092665
551 Ga0495667_0245078
552 Ga0495667_0405489
553 Ga0495635_0096007
554 Ga0495635_0149065
555 Ga0495657_0073845
556 Ga0495599_0018826
557 Ga0495599_0215974
558 Ga0495646_0032837
559 Ga0495600_0050336
560 Ga0495604_0089636
561 Ga0495674_0002371
562 Ga0495674_0139034
563 Ga0495674_0355444
564 Ga0495680_0069938
565 Ga0495680_0255236
566 Ga0495680_0347734
567 Ga0495675_0023400
568 Ga0495675_0118405
569 Ga0495684_0013692
570 Ga0495602_0002986
571 Ga0495602_0031832
572 Ga0495602_0059900
573 Ga0495602_0172893
574 Ga0496108_0509323
575 Ga0496109_0392253
576 Ga0496109_0666580
577 Ga0496110_0260622
578 Ga0496112_0100193
579 Ga0501034_0022831
580 Ga0501068_0027578
581 Ga0501070_0184995
582 Ga0501044_0005641
583 nmdc:mga05p37_10313_c1
584 nmdc:mga06r32_26143_c1
585 nmdc:mga0n895_393782_c1
586 nmdc:mga08x19_21205_c1
587 nmdc:mga0a205_39921_c1
588 Ga0495612_0000454
589 Ga0495612_0121493
590 Ga0495619_0007916
591 Ga0495619_0022329
592 Ga0495619_0022833
593 Ga0495619_0085239
594 Ga0495619_0330827
595 Ga0587083_0003438
596 Ga0587088_019684

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

19

266

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fgc-assembly2.cif.gz_C crystal structure of the bacterial luciferase:flavin complex reveals the basis of intersubunit communication 0.7992 1 277
1tvl-assembly1.cif.gz_A-2 structure of ytnj from bacillus subtilis 0.7957 1 278
3fgc-assembly1.cif.gz_A crystal structure of the bacterial luciferase:flavin complex reveals the basis of intersubunit communication 0.7943 1 277
3sdo-assembly1.cif.gz_B structure of a nitrilotriacetate monooxygenase from burkholderia pseudomallei 0.7936 1 245
1brl-assembly2.cif.gz_C three-dimensional structure of bacterial luciferase from vibrio harveyi at 2.4 angstroms resolution 0.7923 1 276
ID Description Score Start End Superfamily
af_P9WKN5_1_280_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9487 1 275 3.20.20.30
af_O06216_16_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9476 16 272 3.20.20.30
af_O06216_16_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.937 16 272 3.20.20.30
af_P9WKN5_1_280_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9322 1 275 3.20.20.30
af_I6XG43_1_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9317 1 276 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A2V6RVL8-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9809 1 140 GO:0016705
AF-A0A2D9JS61-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9744 1 274 GO:0008726
GO:0046306
AF-A0A356K9I6-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9733 6 125 GO:0016705
AF-A0A537SX27-F1-model_v4 TIGR03619 family F420-dependent LLM class oxidoreductase (EC 1.-.-.-) 0.9642 38 276 GO:0008726
GO:0046306
AF-A0A2D9JS61-F1-model_v4 LLM class F420-dependent oxidoreductase 0.964 1 274 GO:0008726
GO:0046306

Map