F394154

General Info

Members Datasets Scaffolds Average Seq Length
298 193 298 165

Family's Representative Sequence

Representative Sequence 3300005546|Ga0070696_100167364|Ga0070696_1001673642
Length 156
Sequence MSVDEQYLLHPDRLSSKPMVMEGTFTPADLERLEDSLADDRGELRYRITARLDPRRGKVVSCIIEGFVFLTCQTSLEPFRHDVSIEERLVLVESTEDYLVADEPLDIRDLVEDAVLLALPMVPRKPGLEAPRQDREDAVRKESPFAALGSLKKEKR

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
53 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
54 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
59 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
60 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
61 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
62 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
63 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300012480 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610 Metagenome Rhizosphere
74 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
75 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
76 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
77 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
78 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
79 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
80 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
83 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
84 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
85 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
86 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
87 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
88 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
89 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
133 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
136 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
137 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
138 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
139 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
140 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
141 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
142 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
143 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
144 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
145 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
146 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
147 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
148 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
149 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
150 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
151 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
152 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
153 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
154 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
155 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
156 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
157 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
158 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
159 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
160 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
161 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
162 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
163 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
164 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
165 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
166 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
167 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
168 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
169 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
170 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
171 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
172 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
176 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
177 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
178 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
179 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
180 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
181 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
184 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
187 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
188 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
189 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
190 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
191 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
192 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.66
Metatranscriptomes 0.34
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.01
Nodule 0
Rhizoplane 1.34
Rhizosphere 95.64
Stem 0
Stem Tuber 0
Unclassified 1.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10048213 3300005327 Bacteria 3448
2 Ga0070658_10102244 3300005327 Bacteria 2370
3 Ga0070683_100548340 3300005329 Bacteria 1105
4 Ga0070690_100229860 3300005330 Bacteria 1304
5 Ga0070677_10104900 3300005333 Bacteria 1253
6 Ga0068869_100053530 3300005334 Bacteria 2935
7 Ga0070680_100698307 3300005336 Bacteria 873
8 Ga0070682_100214874 3300005337 Bacteria 1365
9 Ga0068868_100098417 3300005338 Bacteria 2365
10 Ga0068868_100348101 3300005338 Bacteria 1268
11 Ga0070689_100068858 3300005340 Bacteria 2760
12 Ga0070689_100235503 3300005340 Bacteria 1506
13 Ga0070689_101073902 3300005340 Bacteria 719
14 Ga0070661_100479633 3300005344 Bacteria 993
15 Ga0070661_100531936 3300005344 Bacteria 944
16 Ga0070661_100806110 3300005344 Bacteria 771
17 Ga0070669_100088257 3300005353 Bacteria 2321
18 Ga0070675_100112200 3300005354 Bacteria 2308
19 Ga0070671_101148183 3300005355 Bacteria 683
20 Ga0070674_100289424 3300005356 Bacteria 1302
21 Ga0070673_100077496 3300005364 Bacteria 2686
22 Ga0070673_100270900 3300005364 Bacteria 1486
23 Ga0070688_100057678 3300005365 Bacteria 2442
24 Ga0070659_100035621 3300005366 Bacteria 3876
25 Ga0070714_100353714 3300005435 Bacteria 1380
26 Ga0070714_100940756 3300005435 Bacteria 840
27 Ga0070714_101313597 3300005435 Unclassified 706
28 Ga0070713_100500884 3300005436 Bacteria 1146
29 Ga0070710_10951262 3300005437 Bacteria 623
30 Ga0070701_10431395 3300005438 Bacteria 842
31 Ga0070701_10504928 3300005438 Bacteria 786
32 Ga0070711_100351703 3300005439 Bacteria 1185
33 Ga0070705_100708989 3300005440 Bacteria 791
34 Ga0070678_100056023 3300005456 Bacteria 2881
35 Ga0070678_101088597 3300005456 Bacteria 737
36 Ga0070662_100370496 3300005457 Bacteria 1177
37 Ga0070681_10157148 3300005458 Bacteria 2198
38 Ga0068867_100032509 3300005459 Bacteria 3774
39 Ga0068867_100091061 3300005459 Bacteria 2315
40 Ga0070685_10019821 3300005466 Bacteria 3634
41 Ga0070707_101113238 3300005468 Bacteria 756
42 Ga0070699_100058688 3300005518 Bacteria 3334
43 Ga0070679_100285649 3300005530 Bacteria 1602
44 Ga0070679_100699133 3300005530 Bacteria 957
45 Ga0070679_100825842 3300005530 Unclassified 870
46 Ga0070684_100066645 3300005535 Bacteria 3160
47 Ga0070697_100692788 3300005536 Bacteria 899
48 Ga0068853_100026482 3300005539 Bacteria 4869
49 Ga0068853_100221304 3300005539 Bacteria 1729
50 Ga0070672_100015276 3300005543 Bacteria 5462
51 Ga0070695_100324110 3300005545 Bacteria 1146
52 Ga0070695_100592769 3300005545 Bacteria 869
53 Ga0070696_100167364 3300005546 Bacteria 1623
54 Ga0070696_100256776 3300005546 Bacteria 1324
55 Ga0070693_100005743 3300005547 Bacteria 5993
56 Ga0070693_100046754 3300005547 Bacteria 2459
57 Ga0070693_100113909 3300005547 Bacteria 1668
58 Ga0070693_100416043 3300005547 Bacteria 935
59 Ga0070693_100514882 3300005547 Unclassified 851
60 Ga0070665_100632792 3300005548 Bacteria 1083
61 Ga0070665_101359908 3300005548 Bacteria 720
62 Ga0068855_100005520 3300005563 Bacteria 15434
63 Ga0068855_100007589 3300005563 Bacteria 13122
64 Ga0068855_100056280 3300005563 Bacteria 4615
65 Ga0068855_100057896 3300005563 Bacteria 4541
66 Ga0070664_101426272 3300005564 Bacteria 655
67 Ga0068857_100091310 3300005577 Bacteria 2726
68 Ga0068854_100644875 3300005578 Bacteria 909
69 Ga0068856_100089060 3300005614 Bacteria 3069
70 Ga0068852_100005046 3300005616 Bacteria 9387
71 Ga0068852_100011457 3300005616 Bacteria 6677
72 Ga0068852_100072469 3300005616 Bacteria 3027
73 Ga0068852_100937343 3300005616 Bacteria 884
74 Ga0068859_100631047 3300005617 Bacteria 1164
75 Ga0068861_100155454 3300005719 Bacteria 1881
76 Ga0068861_100224101 3300005719 Bacteria 1591
77 Ga0068851_10001274 3300005834 Bacteria 10990
78 Ga0068863_100456075 3300005841 Bacteria 1255
79 Ga0068858_100148488 3300005842 Bacteria 2203
80 Ga0068858_100148782 3300005842 Bacteria 2200
81 Ga0068860_101145781 3300005843 Bacteria 797
82 Ga0068862_100076811 3300005844 Bacteria 2890
83 Ga0068862_101551824 3300005844 Bacteria 668
84 Ga0075368_10327775 3300006042 Bacteria 664
85 Ga0075432_10249464 3300006058 Unclassified 720
86 Ga0070712_100367776 3300006175 Bacteria 1181
87 Ga0075366_10006820 3300006195 Bacteria 6281
88 Ga0097621_100114379 3300006237 Bacteria 2283
89 Ga0097621_100133913 3300006237 Bacteria 2112
90 Ga0097621_100213350 3300006237 Bacteria 1680
91 Ga0097621_100424092 3300006237 Bacteria 1194
92 Ga0068871_100019888 3300006358 Bacteria 5133
93 Ga0068871_100124740 3300006358 Bacteria 2178
94 Ga0068871_100461128 3300006358 Bacteria 1140
95 Ga0068871_101255209 3300006358 Unclassified 696
96 Ga0075428_100079307 3300006844 Bacteria 3584
97 Ga0075433_10050145 3300006852 Bacteria 3633
98 Ga0075433_11136021 3300006852 Bacteria 679
99 Ga0075434_100058988 3300006871 Bacteria 3815
100 Ga0075436_100000987 3300006914 Bacteria 19077
101 Ga0097620_100631133 3300006931 Bacteria 1164
102 Ga0105240_10002905 3300009093 Bacteria 27041
103 Ga0105240_10075359 3300009093 Bacteria 4161
104 Ga0111539_10001609 3300009094 Bacteria 30148
105 Ga0105245_10154660 3300009098 Bacteria 2171
106 Ga0105245_10256169 3300009098 Bacteria 1702
107 Ga0105243_10266260 3300009148 Bacteria 1537
108 Ga0105243_10516104 3300009148 Bacteria 1135
109 Ga0105241_10381545 3300009174 Bacteria 1232
110 Ga0105241_10732060 3300009174 Bacteria 905
111 Ga0105241_11139223 3300009174 Bacteria 736
112 Ga0105241_11721237 3300009174 Bacteria 610
113 Ga0105242_10001746 3300009176 Bacteria 17183
114 Ga0105242_10213496 3300009176 Unclassified 1721
115 Ga0105242_10718834 3300009176 Bacteria 979
116 Ga0105242_11870251 3300009176 Bacteria 640
117 Ga0105248_10129285 3300009177 Bacteria 2849
118 Ga0105248_10177836 3300009177 Bacteria 2398
119 Ga0105238_10016679 3300009551 Bacteria 7441
120 Ga0105238_10027043 3300009551 Bacteria 5847
121 Ga0105238_10201822 3300009551 Bacteria 1964
122 Ga0105238_10573269 3300009551 Bacteria 1134
123 Ga0105238_10717571 3300009551 Bacteria 1012
124 Ga0105238_10956408 3300009551 Bacteria 876
125 Ga0105249_10229712 3300009553 Bacteria 1829
126 Ga0157346_1016506 3300012480 Bacteria 602
127 Ga0157371_10362695 3300013102 Bacteria 1056
128 Ga0157371_10712942 3300013102 Bacteria 752
129 Ga0157370_10075694 3300013104 Bacteria 3172
130 Ga0157370_10702434 3300013104 Bacteria 923
131 Ga0157370_11039512 3300013104 Bacteria 741
132 Ga0157369_10006999 3300013105 Bacteria 13013
133 Ga0157369_10260471 3300013105 Bacteria 1809
134 Ga0157369_10661816 3300013105 Bacteria 1077
135 Ga0157369_11202156 3300013105 Bacteria 774
136 Ga0157374_10107657 3300013296 Bacteria 2679
137 Ga0157378_10036316 3300013297 Bacteria 4361
138 Ga0163162_10024927 3300013306 Bacteria 5909
139 Ga0163162_10097840 3300013306 Bacteria 3023
140 Ga0163162_10239946 3300013306 Bacteria 1943
141 Ga0157372_10011481 3300013307 Bacteria 9420
142 Ga0157372_10372669 3300013307 Bacteria 1663
143 Ga0157372_10510128 3300013307 Bacteria 1402
144 Ga0157375_11909664 3300013308 Bacteria 705
145 Ga0157375_12234340 3300013308 Bacteria 652
146 Ga0163163_11591616 3300014325 Unclassified 714
147 Ga0157380_10163478 3300014326 Bacteria 1937
148 Ga0157380_10715574 3300014326 Bacteria 1008
149 Ga0157380_11158015 3300014326 Bacteria 815
150 Ga0157380_11253129 3300014326 Bacteria 787
151 Ga0157377_10014266 3300014745 Bacteria 4040
152 Ga0157379_10148095 3300014968 Bacteria 2117
153 Ga0157376_11147229 3300014969 Bacteria 804
154 Ga0206356_10200818 3300020070 Bacteria 1198
155 Ga0213876_10058114 3300021384 Bacteria 2042
156 Ga0207656_10000660 3300025321 Bacteria 11288
157 Ga0207682_10242294 3300025893 Bacteria 838
158 Ga0207692_10626973 3300025898 Bacteria 693
159 Ga0207699_10480094 3300025906 Unclassified 895
160 Ga0207705_10004289 3300025909 Bacteria 10796
161 Ga0207705_10019000 3300025909 Bacteria 4915
162 Ga0207705_10052928 3300025909 Bacteria 2924
163 Ga0207705_10314915 3300025909 Bacteria 1202
164 Ga0207654_10013228 3300025911 Bacteria 4241
165 Ga0207654_10163158 3300025911 Bacteria 1441
166 Ga0207707_10706267 3300025912 Bacteria 846
167 Ga0207695_10002497 3300025913 Bacteria 27080
168 Ga0207695_10217043 3300025913 Bacteria 1821
169 Ga0207695_10326844 3300025913 Bacteria 1422
170 Ga0207695_10548623 3300025913 Bacteria 1037
171 Ga0207695_10548872 3300025913 Bacteria 1037
172 Ga0207693_10354410 3300025915 Bacteria 1148
173 Ga0207663_10765252 3300025916 Bacteria 768
174 Ga0207660_10731007 3300025917 Bacteria 808
175 Ga0207657_10883610 3300025919 Bacteria 689
176 Ga0207649_10371670 3300025920 Bacteria 1063
177 Ga0207649_10470057 3300025920 Bacteria 952
178 Ga0207652_10333277 3300025921 Bacteria 1370
179 Ga0207652_11434700 3300025921 Unclassified 594
180 Ga0207694_10028243 3300025924 Bacteria 4277
181 Ga0207694_10425420 3300025924 Bacteria 1107
182 Ga0207659_10009165 3300025926 Bacteria 6181
183 Ga0207659_10145012 3300025926 Bacteria 1848
184 Ga0207687_10163525 3300025927 Bacteria 1710
185 Ga0207700_10435446 3300025928 Bacteria 1154
186 Ga0207664_10601262 3300025929 Bacteria 988
187 Ga0207664_10795777 3300025929 Bacteria 850
188 Ga0207664_11250139 3300025929 Bacteria 661
189 Ga0207644_10996156 3300025931 Bacteria 703
190 Ga0207690_10036900 3300025932 Bacteria 3169
191 Ga0207706_10112472 3300025933 Bacteria 2395
192 Ga0207686_10012920 3300025934 Bacteria 4606
193 Ga0207686_10347449 3300025934 Bacteria 1116
194 Ga0207709_10985285 3300025935 Bacteria 688
195 Ga0207670_10131490 3300025936 Bacteria 1834
196 Ga0207669_10065198 3300025937 Bacteria 2258
197 Ga0207665_10722900 3300025939 Bacteria 784
198 Ga0207691_10010003 3300025940 Bacteria 9106
199 Ga0207691_10254234 3300025940 Bacteria 1516
200 Ga0207689_10008792 3300025942 Bacteria 8778
201 Ga0207661_10201245 3300025944 Bacteria 1751
202 Ga0207667_10007133 3300025949 Bacteria 13491
203 Ga0207667_10013536 3300025949 Bacteria 9327
204 Ga0207667_10035593 3300025949 Bacteria 5341
205 Ga0207651_10063856 3300025960 Bacteria 2574
206 Ga0207651_10289718 3300025960 Bacteria 1357
207 Ga0207651_10867421 3300025960 Bacteria 803
208 Ga0207712_10062473 3300025961 Bacteria 2648
209 Ga0207640_11695416 3300025981 Unclassified 570
210 Ga0207677_10095041 3300026023 Bacteria 2177
211 Ga0207677_10678296 3300026023 Bacteria 912
212 Ga0207677_11452991 3300026023 Bacteria 632
213 Ga0207703_10185553 3300026035 Bacteria 1838
214 Ga0207703_10306426 3300026035 Bacteria 1450
215 Ga0207703_10402970 3300026035 Bacteria 1270
216 Ga0207639_10013810 3300026041 Bacteria 5663
217 Ga0207639_10171235 3300026041 Bacteria 1839
218 Ga0207639_10658203 3300026041 Bacteria 969
219 Ga0207708_10091531 3300026075 Bacteria 2345
220 Ga0207648_10054747 3300026089 Bacteria 3483
221 Ga0207674_10097603 3300026116 Bacteria 2922
222 Ga0207674_10184973 3300026116 Bacteria 2034
223 Ga0207675_100231057 3300026118 Bacteria 1785
224 Ga0207675_100233218 3300026118 Bacteria 1776
225 Ga0207675_101000579 3300026118 Bacteria 854
226 Ga0207683_10107115 3300026121 Bacteria 2500
227 Ga0207698_10008585 3300026142 Bacteria 6472
228 Ga0207698_10025073 3300026142 Bacteria 4195
229 Ga0207428_10019042 3300027907 Bacteria 5854
230 Ga0268266_11356066 3300028379 Bacteria 687
231 Ga0268264_10224305 3300028381 Bacteria 1732
232 Ga0268264_11886384 3300028381 Bacteria 607
233 Ga0307408_100030045 3300031548 Bacteria 3771
234 Ga0265314_10180335 3300031711 Bacteria 1266
235 Ga0307413_10157626 3300031824 Bacteria 1591
236 Ga0307416_100706262 3300032002 Bacteria 1098
237 Ga0373930_0007910 3300034816 Bacteria 1845
238 Ga0373929_0011143 3300035085 Bacteria 1690
239 Ga0373953_0194837 3300035117 Bacteria 876
240 Ga0373954_0114270 3300035118 Bacteria 1307
241 Ga0373960_0280362 3300035121 Bacteria 614
242 Ga0373955_0063020 3300035172 Bacteria 2052
243 Ga0373924_0044419 3300035410 Bacteria 1826
244 Ga0395900_0037295 3300037418 Bacteria 5013
245 Ga0395905_0077874 3300037471 Bacteria 3106
246 Ga0395901_1709926 3300038443 Bacteria 580
247 Ga0439439_0037951 3300041406 Bacteria 1243
248 Ga0451807_0354860 3300041486 Bacteria 874
249 Ga0451807_0547363 3300041486 Bacteria 714
250 Ga0451839_1346336 3300041496 Bacteria 872
251 Ga0451849_0604861 3300041505 Bacteria 720
252 Ga0439441_000553 3300042001 Bacteria 4140
253 Ga0466961_0751696 3300044693 Unclassified 583
254 Ga0466963_0331546 3300044694 Bacteria 1071
255 Ga0466957_0368664 3300044842 Bacteria 977
256 Ga0466958_0008642 3300045836 Bacteria 5655
257 Ga0495592_0053712 3300046454 Bacteria 2987
258 Ga0495608_0005992 3300046511 Bacteria 8642
259 Ga0495628_0084366 3300046516 Bacteria 2465
260 Ga0495652_0041403 3300046529 Bacteria 3977
261 Ga0495587_0068972 3300046536 Bacteria 2059
262 Ga0495598_0097260 3300046537 Bacteria 969
263 Ga0495645_0004110 3300046543 Bacteria 9941
264 Ga0495599_0001388 3300046678 Bacteria 13841
265 Ga0495623_0027898 3300046679 Bacteria 3634
266 Ga0495600_0081894 3300046809 Bacteria 2106
267 Ga0495604_0073849 3300047317 Bacteria 2572
268 Ga0495675_0372741 3300047444 Bacteria 836
269 Ga0496105_0629016 3300048908 Bacteria 830
270 Ga0496111_0149402 3300048914 Bacteria 1733
271 Ga0501043_0625712 3300049579 Bacteria 793
272 Ga0501046_0095064 3300049580 Bacteria 2290
273 Ga0501047_0001153 3300049581 Bacteria 26233
274 Ga0501047_0527360 3300049581 Bacteria 1006
275 Ga0501067_0191151 3300049583 Bacteria 1140
276 Ga0501070_0003751 3300049586 Bacteria 13121
277 Ga0501072_0513638 3300049588 Bacteria 947
278 Ga0501073_0004424 3300049589 Bacteria 10561
279 Ga0501073_0208837 3300049589 Bacteria 1349
280 Ga0501074_0001266 3300049590 Bacteria 16695
281 Ga0501080_0002979 3300049742 Bacteria 14907
282 Ga0501080_0170463 3300049742 Bacteria 2008
283 Ga0501083_0015144 3300049744 Bacteria 5399
284 Ga0501044_0663116 3300049823 Bacteria 931
285 nmdc:mga0k408_305903_c1 3300050493 Bacteria 949
286 nmdc:mga0k408_3277_c2 3300050493 Bacteria 6175
287 nmdc:mga07m45_212705_c1 3300050496 Bacteria 1125
288 nmdc:mga08y16_390_c1 3300050511 Bacteria 40107
289 nmdc:mga0n895_187776_c1 3300050512 Bacteria 2098
290 nmdc:mga0n895_951516_c1 3300050512 Bacteria 842
291 nmdc:mga0rr50_745041_c1 3300050513 Bacteria 836
292 nmdc:mga08x19_18151_c1 3300050514 Bacteria 4310
293 nmdc:mga08x19_638029_c1 3300050514 Bacteria 755
294 nmdc:mga0a205_141912_c1 3300050515 Bacteria 2302
295 Ga0495601_0024802 3300053077 Bacteria 3693
296 Ga0495595_0036774 3300053084 Bacteria 2223
297 Ga0500641_0169315 3300053096 Bacteria 940
298 Ga0501082_0039874 3300060353 Bacteria 4052

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035085 Ga0373929_0011143 Ga0373929_0011143_11_457 137
2 3300005353 Ga0070669_100088257 Ga0070669_1000882572 141
3 3300005466 Ga0070685_10019821 Ga0070685_100198214 141
4 3300046537 Ga0495598_0097260 Ga0495598_0097260_18_449 142
5 3300041406 Ga0439439_0037951 Ga0439439_0037951_784_1224 146
6 3300005327 Ga0070658_10102244 Ga0070658_101022442 152
7 3300005468 Ga0070707_101113238 Ga0070707_1011132381 152
8 3300025909 Ga0207705_10052928 Ga0207705_100529284 152
9 3300005546 Ga0070696_100167364 Ga0070696_1001673642 153
10 3300005547 Ga0070693_100046754 Ga0070693_1000467543 153
11 3300009174 Ga0105241_10381545 Ga0105241_103815452 153
12 3300025911 Ga0207654_10163158 Ga0207654_101631582 153
13 3300025913 Ga0207695_10548872 Ga0207695_105488723 153
14 3300005842 Ga0068858_100148488 Ga0068858_1001484883 155
15 3300009176 Ga0105242_10001746 Ga0105242_100017464 155
16 3300009551 Ga0105238_10573269 Ga0105238_105732692 155
17 3300013306 Ga0163162_10024927 Ga0163162_100249273 155
18 3300014326 Ga0157380_11253129 Ga0157380_112531292 155
19 3300025924 Ga0207694_10425420 Ga0207694_104254202 155
20 3300025934 Ga0207686_10012920 Ga0207686_100129205 155
21 3300026035 Ga0207703_10185553 Ga0207703_101855533 155
22 3300034816 Ga0373930_0007910 Ga0373930_0007910_182_682 155
23 3300014326 Ga0157380_10715574 Ga0157380_107155742 159
24 3300005844 Ga0068862_101551824 Ga0068862_1015518242 160
25 3300006237 Ga0097621_100213350 Ga0097621_1002133503 160
26 3300009148 Ga0105243_10266260 Ga0105243_102662603 160
27 3300009174 Ga0105241_11721237 Ga0105241_117212372 160
28 3300013306 Ga0163162_10097840 Ga0163162_100978402 160
29 3300013308 Ga0157375_12234340 Ga0157375_122343402 160
30 3300025928 Ga0207700_10435446 Ga0207700_104354462 160
31 3300026118 Ga0207675_101000579 Ga0207675_1010005792 160
32 3300053096 Ga0500641_0169315 Ga0500641_0169315_297_782 160
33 3300005337 Ga0070682_100214874 Ga0070682_1002148743 163
34 3300005340 Ga0070689_101073902 Ga0070689_1010739022 163
35 3300005354 Ga0070675_100112200 Ga0070675_1001122002 163
36 3300005356 Ga0070674_100289424 Ga0070674_1002894243 163
37 3300005365 Ga0070688_100057678 Ga0070688_1000576782 163
38 3300005438 Ga0070701_10431395 Ga0070701_104313951 163
39 3300005438 Ga0070701_10504928 Ga0070701_105049281 163
40 3300005456 Ga0070678_101088597 Ga0070678_1010885971 163
41 3300005457 Ga0070662_100370496 Ga0070662_1003704961 163
42 3300005543 Ga0070672_100015276 Ga0070672_1000152764 163
43 3300005548 Ga0070665_100632792 Ga0070665_1006327922 163
44 3300005577 Ga0068857_100091310 Ga0068857_1000913103 163
45 3300005617 Ga0068859_100631047 Ga0068859_1006310472 163
46 3300005719 Ga0068861_100155454 Ga0068861_1001554543 163
47 3300005844 Ga0068862_100076811 Ga0068862_1000768112 163
48 3300006931 Ga0097620_100631133 Ga0097620_1006311332 163
49 3300009176 Ga0105242_10718834 Ga0105242_107188342 163
50 3300012480 Ga0157346_1016506 Ga0157346_10165061 163
51 3300014326 Ga0157380_10163478 Ga0157380_101634783 163
52 3300014745 Ga0157377_10014266 Ga0157377_100142664 163
53 3300025926 Ga0207659_10009165 Ga0207659_100091654 163
54 3300025933 Ga0207706_10112472 Ga0207706_101124723 163
55 3300025940 Ga0207691_10010003 Ga0207691_100100034 163
56 3300026075 Ga0207708_10091531 Ga0207708_100915313 163
57 3300026116 Ga0207674_10184973 Ga0207674_101849732 163
58 3300026118 Ga0207675_100231057 Ga0207675_1002310573 163
59 3300041486 Ga0451807_0354860 Ga0451807_0354860_40_534 163
60 3300041496 Ga0451839_1346336 Ga0451839_1346336_274_768 163
61 3300041505 Ga0451849_0604861 Ga0451849_0604861_84_578 163
62 3300042001 Ga0439441_000553 Ga0439441_000553_2858_3349 163
63 3300005530 Ga0070679_100825842 Ga0070679_1008258421 164
64 3300005563 Ga0068855_100056280 Ga0068855_1000562803 164
65 3300006844 Ga0075428_100079307 Ga0075428_1000793072 164
66 3300009093 Ga0105240_10002905 Ga0105240_1000290520 164
67 3300009094 Ga0111539_10001609 Ga0111539_1000160931 164
68 3300020070 Ga0206356_10200818 Ga0206356_102008184 164
69 3300025913 Ga0207695_10002497 Ga0207695_1000249720 164
70 3300025949 Ga0207667_10013536 Ga0207667_100135368 164
71 3300027907 Ga0207428_10019042 Ga0207428_100190426 164
72 3300031824 Ga0307413_10157626 Ga0307413_101576262 164
73 3300049581 Ga0501047_0527360 Ga0501047_0527360_446_940 164
74 3300049589 Ga0501073_0208837 Ga0501073_0208837_269_763 164
75 3300049742 Ga0501080_0170463 Ga0501080_0170463_173_667 164
76 3300049823 Ga0501044_0663116 Ga0501044_0663116_365_859 164
77 3300050511 nmdc:mga08y16_390_c1 nmdc:mga08y16_390_c1_5997_6494 164
78 3300005330 Ga0070690_100229860 Ga0070690_1002298602 165
79 3300005333 Ga0070677_10104900 Ga0070677_101049001 165
80 3300005334 Ga0068869_100053530 Ga0068869_1000535303 165
81 3300005338 Ga0068868_100348101 Ga0068868_1003481013 165
82 3300005340 Ga0070689_100068858 Ga0070689_1000688584 165
83 3300005340 Ga0070689_100235503 Ga0070689_1002355032 165
84 3300005344 Ga0070661_100479633 Ga0070661_1004796332 165
85 3300005355 Ga0070671_101148183 Ga0070671_1011481831 165
86 3300005364 Ga0070673_100077496 Ga0070673_1000774964 165
87 3300005364 Ga0070673_100270900 Ga0070673_1002709002 165
88 3300005435 Ga0070714_100353714 Ga0070714_1003537141 165
89 3300005435 Ga0070714_100940756 Ga0070714_1009407561 165
90 3300005435 Ga0070714_101313597 Ga0070714_1013135971 165
91 3300005439 Ga0070711_100351703 Ga0070711_1003517032 165
92 3300005456 Ga0070678_100056023 Ga0070678_1000560233 165
93 3300005458 Ga0070681_10157148 Ga0070681_101571481 165
94 3300005459 Ga0068867_100032509 Ga0068867_1000325093 165
95 3300005459 Ga0068867_100091061 Ga0068867_1000910614 165
96 3300005530 Ga0070679_100699133 Ga0070679_1006991332 165
97 3300005535 Ga0070684_100066645 Ga0070684_1000666453 165
98 3300005536 Ga0070697_100692788 Ga0070697_1006927882 165
99 3300005539 Ga0068853_100221304 Ga0068853_1002213041 165
100 3300005545 Ga0070695_100324110 Ga0070695_1003241102 165
101 3300005545 Ga0070695_100592769 Ga0070695_1005927691 165
102 3300005547 Ga0070693_100005743 Ga0070693_1000057433 165
103 3300005547 Ga0070693_100514882 Ga0070693_1005148821 165
104 3300005548 Ga0070665_101359908 Ga0070665_1013599081 165
105 3300005563 Ga0068855_100005520 Ga0068855_10000552010 165
106 3300005563 Ga0068855_100007589 Ga0068855_10000758910 165
107 3300005564 Ga0070664_101426272 Ga0070664_1014262721 165
108 3300005578 Ga0068854_100644875 Ga0068854_1006448752 165
109 3300005614 Ga0068856_100089060 Ga0068856_1000890603 165
110 3300005719 Ga0068861_100224101 Ga0068861_1002241013 165
111 3300005841 Ga0068863_100456075 Ga0068863_1004560753 165
112 3300005842 Ga0068858_100148782 Ga0068858_1001487823 165
113 3300005843 Ga0068860_101145781 Ga0068860_1011457812 165
114 3300006042 Ga0075368_10327775 Ga0075368_103277751 165
115 3300006058 Ga0075432_10249464 Ga0075432_102494641 165
116 3300006175 Ga0070712_100367776 Ga0070712_1003677762 165
117 3300006195 Ga0075366_10006820 Ga0075366_100068202 165
118 3300006237 Ga0097621_100114379 Ga0097621_1001143791 165
119 3300006237 Ga0097621_100424092 Ga0097621_1004240922 165
120 3300006358 Ga0068871_100124740 Ga0068871_1001247404 165
121 3300006358 Ga0068871_100461128 Ga0068871_1004611282 165
122 3300006358 Ga0068871_101255209 Ga0068871_1012552091 165
123 3300006852 Ga0075433_11136021 Ga0075433_111360211 165
124 3300006871 Ga0075434_100058988 Ga0075434_1000589883 165
125 3300006914 Ga0075436_100000987 Ga0075436_10000098719 165
126 3300009098 Ga0105245_10154660 Ga0105245_101546604 165
127 3300009098 Ga0105245_10256169 Ga0105245_102561693 165
128 3300009148 Ga0105243_10516104 Ga0105243_105161042 165
129 3300009174 Ga0105241_10732060 Ga0105241_107320602 165
130 3300009176 Ga0105242_10213496 Ga0105242_102134963 165
131 3300009176 Ga0105242_11870251 Ga0105242_118702511 165
132 3300009177 Ga0105248_10129285 Ga0105248_101292853 165
133 3300009177 Ga0105248_10177836 Ga0105248_101778364 165
134 3300009551 Ga0105238_10016679 Ga0105238_100166798 165
135 3300009551 Ga0105238_10717571 Ga0105238_107175712 165
136 3300009551 Ga0105238_10956408 Ga0105238_109564082 165
137 3300009553 Ga0105249_10229712 Ga0105249_102297123 165
138 3300013102 Ga0157371_10362695 Ga0157371_103626952 165
139 3300013104 Ga0157370_10075694 Ga0157370_100756942 165
140 3300013104 Ga0157370_11039512 Ga0157370_110395122 165
141 3300013105 Ga0157369_10260471 Ga0157369_102604713 165
142 3300013105 Ga0157369_10661816 Ga0157369_106618162 165
143 3300013105 Ga0157369_11202156 Ga0157369_112021562 165
144 3300013296 Ga0157374_10107657 Ga0157374_101076573 165
145 3300013297 Ga0157378_10036316 Ga0157378_100363164 165
146 3300013306 Ga0163162_10239946 Ga0163162_102399463 165
147 3300013307 Ga0157372_10372669 Ga0157372_103726693 165
148 3300013308 Ga0157375_11909664 Ga0157375_119096641 165
149 3300014325 Ga0163163_11591616 Ga0163163_115916161 165
150 3300014326 Ga0157380_11158015 Ga0157380_111580151 165
151 3300014968 Ga0157379_10148095 Ga0157379_101480953 165
152 3300014969 Ga0157376_11147229 Ga0157376_111472292 165
153 3300021384 Ga0213876_10058114 Ga0213876_100581143 165
154 3300025893 Ga0207682_10242294 Ga0207682_102422942 165
155 3300025906 Ga0207699_10480094 Ga0207699_104800942 165
156 3300025909 Ga0207705_10004289 Ga0207705_100042898 165
157 3300025911 Ga0207654_10013228 Ga0207654_100132283 165
158 3300025912 Ga0207707_10706267 Ga0207707_107062672 165
159 3300025913 Ga0207695_10326844 Ga0207695_103268441 165
160 3300025913 Ga0207695_10548623 Ga0207695_105486233 165
161 3300025915 Ga0207693_10354410 Ga0207693_103544102 165
162 3300025919 Ga0207657_10883610 Ga0207657_108836101 165
163 3300025920 Ga0207649_10470057 Ga0207649_104700572 165
164 3300025926 Ga0207659_10145012 Ga0207659_101450122 165
165 3300025927 Ga0207687_10163525 Ga0207687_101635252 165
166 3300025929 Ga0207664_10601262 Ga0207664_106012622 165
167 3300025929 Ga0207664_10795777 Ga0207664_107957772 165
168 3300025931 Ga0207644_10996156 Ga0207644_109961561 165
169 3300025934 Ga0207686_10347449 Ga0207686_103474493 165
170 3300025935 Ga0207709_10985285 Ga0207709_109852852 165
171 3300025936 Ga0207670_10131490 Ga0207670_101314903 165
172 3300025937 Ga0207669_10065198 Ga0207669_100651983 165
173 3300025940 Ga0207691_10254234 Ga0207691_102542343 165
174 3300025942 Ga0207689_10008792 Ga0207689_100087923 165
175 3300025949 Ga0207667_10007133 Ga0207667_100071338 165
176 3300025960 Ga0207651_10063856 Ga0207651_100638564 165
177 3300025960 Ga0207651_10289718 Ga0207651_102897183 165
178 3300025960 Ga0207651_10867421 Ga0207651_108674212 165
179 3300025961 Ga0207712_10062473 Ga0207712_100624734 165
180 3300025981 Ga0207640_11695416 Ga0207640_116954161 165
181 3300026023 Ga0207677_10095041 Ga0207677_100950411 165
182 3300026023 Ga0207677_10678296 Ga0207677_106782962 165
183 3300026023 Ga0207677_11452991 Ga0207677_114529911 165
184 3300026035 Ga0207703_10306426 Ga0207703_103064262 165
185 3300026041 Ga0207639_10171235 Ga0207639_101712351 165
186 3300026089 Ga0207648_10054747 Ga0207648_100547474 165
187 3300026116 Ga0207674_10097603 Ga0207674_100976033 165
188 3300026118 Ga0207675_100233218 Ga0207675_1002332183 165
189 3300026121 Ga0207683_10107115 Ga0207683_101071153 165
190 3300028379 Ga0268266_11356066 Ga0268266_113560661 165
191 3300028381 Ga0268264_10224305 Ga0268264_102243052 165
192 3300028381 Ga0268264_11886384 Ga0268264_118863841 165
193 3300031711 Ga0265314_10180335 Ga0265314_101803352 165
194 3300035117 Ga0373953_0194837 Ga0373953_0194837_358_858 165
195 3300035118 Ga0373954_0114270 Ga0373954_0114270_760_1260 165
196 3300035172 Ga0373955_0063020 Ga0373955_0063020_497_997 165
197 3300035410 Ga0373924_0044419 Ga0373924_0044419_194_694 165
198 3300037418 Ga0395900_0037295 Ga0395900_0037295_3493_4002 165
199 3300037471 Ga0395905_0077874 Ga0395905_0077874_27_536 165
200 3300041486 Ga0451807_0547363 Ga0451807_0547363_131_637 165
201 3300044694 Ga0466963_0331546 Ga0466963_0331546_61_558 165
202 3300046454 Ga0495592_0053712 Ga0495592_0053712_2140_2640 165
203 3300046511 Ga0495608_0005992 Ga0495608_0005992_6300_6800 165
204 3300046516 Ga0495628_0084366 Ga0495628_0084366_820_1320 165
205 3300046529 Ga0495652_0041403 Ga0495652_0041403_1986_2486 165
206 3300046536 Ga0495587_0068972 Ga0495587_0068972_846_1346 165
207 3300046543 Ga0495645_0004110 Ga0495645_0004110_1224_1724 165
208 3300046678 Ga0495599_0001388 Ga0495599_0001388_7002_7502 165
209 3300046679 Ga0495623_0027898 Ga0495623_0027898_578_1078 165
210 3300046809 Ga0495600_0081894 Ga0495600_0081894_485_985 165
211 3300047317 Ga0495604_0073849 Ga0495604_0073849_831_1331 165
212 3300047444 Ga0495675_0372741 Ga0495675_0372741_68_568 165
213 3300049579 Ga0501043_0625712 Ga0501043_0625712_188_685 165
214 3300049580 Ga0501046_0095064 Ga0501046_0095064_744_1241 165
215 3300049581 Ga0501047_0001153 Ga0501047_0001153_23111_23608 165
216 3300049583 Ga0501067_0191151 Ga0501067_0191151_273_770 165
217 3300049586 Ga0501070_0003751 Ga0501070_0003751_6248_6745 165
218 3300049588 Ga0501072_0513638 Ga0501072_0513638_227_724 165
219 3300049589 Ga0501073_0004424 Ga0501073_0004424_815_1312 165
220 3300049590 Ga0501074_0001266 Ga0501074_0001266_1543_2040 165
221 3300049742 Ga0501080_0002979 Ga0501080_0002979_1723_2220 165
222 3300049744 Ga0501083_0015144 Ga0501083_0015144_4177_4674 165
223 3300050493 nmdc:mga0k408_3277_c2 nmdc:mga0k408_3277_c2_1029_1526 165
224 3300050496 nmdc:mga07m45_212705_c1 nmdc:mga07m45_212705_c1_67_564 165
225 3300050512 nmdc:mga0n895_187776_c1 nmdc:mga0n895_187776_c1_982_1494 165
226 3300050512 nmdc:mga0n895_951516_c1 nmdc:mga0n895_951516_c1_325_825 165
227 3300050513 nmdc:mga0rr50_745041_c1 nmdc:mga0rr50_745041_c1_247_759 165
228 3300050514 nmdc:mga08x19_18151_c1 nmdc:mga08x19_18151_c1_1462_1962 165
229 3300050514 nmdc:mga08x19_638029_c1 nmdc:mga08x19_638029_c1_38_541 165
230 3300053077 Ga0495601_0024802 Ga0495601_0024802_1554_2054 165
231 3300053084 Ga0495595_0036774 Ga0495595_0036774_1108_1608 165
232 3300060353 Ga0501082_0039874 Ga0501082_0039874_2531_3028 165
233 3300005327 Ga0070658_10048213 Ga0070658_100482133 166
234 3300005329 Ga0070683_100548340 Ga0070683_1005483401 166
235 3300005336 Ga0070680_100698307 Ga0070680_1006983072 166
236 3300005338 Ga0068868_100098417 Ga0068868_1000984174 166
237 3300005344 Ga0070661_100531936 Ga0070661_1005319361 166
238 3300005344 Ga0070661_100806110 Ga0070661_1008061101 166
239 3300005366 Ga0070659_100035621 Ga0070659_1000356213 166
240 3300005436 Ga0070713_100500884 Ga0070713_1005008842 166
241 3300005437 Ga0070710_10951262 Ga0070710_109512621 166
242 3300005440 Ga0070705_100708989 Ga0070705_1007089891 166
243 3300005518 Ga0070699_100058688 Ga0070699_1000586883 166
244 3300005530 Ga0070679_100285649 Ga0070679_1002856493 166
245 3300005539 Ga0068853_100026482 Ga0068853_1000264826 166
246 3300005546 Ga0070696_100256776 Ga0070696_1002567762 166
247 3300005547 Ga0070693_100113909 Ga0070693_1001139093 166
248 3300005547 Ga0070693_100416043 Ga0070693_1004160432 166
249 3300005563 Ga0068855_100057896 Ga0068855_1000578962 166
250 3300005616 Ga0068852_100005046 Ga0068852_1000050465 166
251 3300005616 Ga0068852_100011457 Ga0068852_1000114577 166
252 3300005616 Ga0068852_100072469 Ga0068852_1000724692 166
253 3300005616 Ga0068852_100937343 Ga0068852_1009373432 166
254 3300005834 Ga0068851_10001274 Ga0068851_100012746 166
255 3300006237 Ga0097621_100133913 Ga0097621_1001339132 166
256 3300006358 Ga0068871_100019888 Ga0068871_1000198885 166
257 3300006852 Ga0075433_10050145 Ga0075433_100501452 166
258 3300009093 Ga0105240_10075359 Ga0105240_100753594 166
259 3300009174 Ga0105241_11139223 Ga0105241_111392232 166
260 3300009551 Ga0105238_10027043 Ga0105238_100270433 166
261 3300009551 Ga0105238_10201822 Ga0105238_102018222 166
262 3300013102 Ga0157371_10712942 Ga0157371_107129422 166
263 3300013104 Ga0157370_10702434 Ga0157370_107024341 166
264 3300013105 Ga0157369_10006999 Ga0157369_100069993 166
265 3300013307 Ga0157372_10011481 Ga0157372_100114813 166
266 3300013307 Ga0157372_10510128 Ga0157372_105101283 166
267 3300025321 Ga0207656_10000660 Ga0207656_100006609 166
268 3300025898 Ga0207692_10626973 Ga0207692_106269731 166
269 3300025909 Ga0207705_10019000 Ga0207705_100190005 166
270 3300025909 Ga0207705_10314915 Ga0207705_103149152 166
271 3300025913 Ga0207695_10217043 Ga0207695_102170432 166
272 3300025916 Ga0207663_10765252 Ga0207663_107652521 166
273 3300025917 Ga0207660_10731007 Ga0207660_107310071 166
274 3300025920 Ga0207649_10371670 Ga0207649_103716702 166
275 3300025921 Ga0207652_10333277 Ga0207652_103332773 166
276 3300025921 Ga0207652_11434700 Ga0207652_114347001 166
277 3300025924 Ga0207694_10028243 Ga0207694_100282432 166
278 3300025929 Ga0207664_11250139 Ga0207664_112501392 166
279 3300025932 Ga0207690_10036900 Ga0207690_100369003 166
280 3300025939 Ga0207665_10722900 Ga0207665_107229001 166
281 3300025944 Ga0207661_10201245 Ga0207661_102012452 166
282 3300025949 Ga0207667_10035593 Ga0207667_100355934 166
283 3300026035 Ga0207703_10402970 Ga0207703_104029703 166
284 3300026041 Ga0207639_10013810 Ga0207639_100138107 166
285 3300026041 Ga0207639_10658203 Ga0207639_106582032 166
286 3300026142 Ga0207698_10008585 Ga0207698_100085854 166
287 3300026142 Ga0207698_10025073 Ga0207698_100250735 166
288 3300031548 Ga0307408_100030045 Ga0307408_1000300453 166
289 3300032002 Ga0307416_100706262 Ga0307416_1007062622 166
290 3300035121 Ga0373960_0280362 Ga0373960_0280362_42_554 166
291 3300038443 Ga0395901_1709926 Ga0395901_1709926_43_555 166
292 3300044693 Ga0466961_0751696 Ga0466961_0751696_51_563 166
293 3300044842 Ga0466957_0368664 Ga0466957_0368664_343_855 166
294 3300045836 Ga0466958_0008642 Ga0466958_0008642_1633_2145 166
295 3300048908 Ga0496105_0629016 Ga0496105_0629016_41_541 166
296 3300048914 Ga0496111_0149402 Ga0496111_0149402_717_1217 166
297 3300050493 nmdc:mga0k408_305903_c1 nmdc:mga0k408_305903_c1_296_805 166
298 3300050515 nmdc:mga0a205_141912_c1 nmdc:mga0a205_141912_c1_1187_1690 166

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02620

YceD

Large ribosomal RNA subunit accumulation protein YceD

60

152

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5dac-assembly1.cif.gz_B atp-gamma-s bound rad50 from chaetomium thermophilum in complex with dna 0.664 40 90
3k8a-assembly1.cif.gz_A neisseria gonorrhoeae prib 0.6215 48 88
6f38-assembly1.cif.gz_L cryo-em structure of two dynein tail domains bound to dynactin and hook3 0.5888 39 86
3lk4-assembly9.cif.gz_Z crystal structure of capz bound to the uncapping motif from cd2ap 0.5671 39 88
1exu-assembly1.cif.gz_A crystal structure of the human mhc-related fc receptor 0.5609 37 77
ID Description Score Start End Superfamily
af_Q54CS9_3_300_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6657 40 90 3.40.50.300
3k8aA00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.6215 48 88 2.40.50.140
af_P13517_96_287_3.90.1150.210 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;F-actin capping protein, beta subunit 0.6067 40 96 3.90.1150.210
af_O44199_3_291_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.5889 40 85 3.40.50.300
af_Q9JIL8_3_164_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.5693 40 86 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7C6VNU6-F1-model_v4 Large ribosomal RNA subunit accumulation protein YceD (23S rRNA accumulation protein YceD) 0.8769 4 126 GO:0005829
GO:0042254
AF-A0A2N2Q867-F1-model_v4 DNA-binding protein 0.875 14 111 GO:0003677
AF-A0A2E5NM63-F1-model_v4 Large ribosomal RNA subunit accumulation protein YceD (23S rRNA accumulation protein YceD) 0.8625 17 136 GO:0005829
GO:0042254
AF-A0A1Q4GT47-F1-model_v4 Large ribosomal RNA subunit accumulation protein YceD (23S rRNA accumulation protein YceD) 0.8608 1 131 GO:0005829
GO:0042254
AF-A0A7X4K1Q9-F1-model_v4 deleted 0.8596 4 133

Feature Viewer

pLDDT pTM Quality
80.26 0.68 Medium
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Predicted Structure (AlphaFold2)

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Map