F393457

General Info

Members Datasets Scaffolds Average Seq Length
296 189 592 193

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221587|2643946790
Length 211
Sequence TEDHQARGGDGGDGQAGGGDAADDGLRGRLVRVGVELVNAEGAQALSLREITRRAGVSHGAPRRHFPTHLDLLSAIARQGFAELSARVAAEDRETAAPRERIALLARTYLDFAAARTGMYELMFRHDLLESGRLGLRGTSLPLFAHLTGLLARVRPGGDPAVLAGALWANLHGIAQLRHWGSLRLATGEDDPAPFLAAILDAHLGPAEPTP

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
26 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
27 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
28 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
37 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
38 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
39 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
42 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
43 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
44 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
45 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
46 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
47 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
48 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
49 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
50 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
51 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
52 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
53 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
54 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
55 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
56 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
57 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
58 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
59 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
60 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
61 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
62 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
63 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
64 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
65 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
68 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
69 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
70 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
71 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
72 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
73 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
74 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
75 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
76 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
79 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
80 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
81 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
82 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
85 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
86 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
87 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
88 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
89 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
90 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
91 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
92 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
95 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
96 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
99 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
100 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
108 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
109 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
113 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
114 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
115 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
116 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
117 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
118 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
119 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
123 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
126 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
127 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
132 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
145 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
148 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
149 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
150 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
151 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
152 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
153 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
154 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
155 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
156 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
157 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
158 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
159 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
160 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
161 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
162 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
163 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
164 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
165 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
166 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
167 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
168 2643221714 Streptomyces sp. Root264 Isolate Unclassified
169 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
170 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
171 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
172 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
173 2855683550 Micromonospora sp. RP3T Isolate Unclassified
174 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
175 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
176 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
177 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
178 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
179 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
180 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
181 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
182 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
183 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
184 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
185 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
186 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
187 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
188 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
189 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.19
Metatranscriptomes 0.68
Isolates 10.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.43
Nodule 0
Rhizoplane 2.03
Rhizosphere 68.58
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10034858 3300001989 Bacteria 1711
2 JGI25406J46586_10030640 3300003203 Bacteria 2022
3 rootH1_10007013 3300003323 Bacteria 3411
4 JGI25160J50197_1000875 3300003354 Bacteria 15898
5 Ga0006562J51391_1179653 3300003578 Bacteria 8634
6 Ga0006562J51391_1179654 3300003578 Bacteria 8520
7 Ga0070658_10995937 3300005327 Bacteria 729
8 Ga0070683_100282301 3300005329 Bacteria 1579
9 Ga0070682_100181439 3300005337 Bacteria 1471
10 Ga0070660_100474389 3300005339 Bacteria 1039
11 Ga0070713_101261409 3300005436 Bacteria 716
12 Ga0070681_10592706 3300005458 Bacteria 1023
13 Ga0070679_100288513 3300005530 Bacteria 1593
14 Ga0070684_100072373 3300005535 Bacteria 3035
15 Ga0070665_100074326 3300005548 Bacteria 3404
16 Ga0068857_100384984 3300005577 Bacteria 1303
17 Ga0068856_100216481 3300005614 Bacteria 1931
18 Ga0081539_10003688 3300005985 Bacteria 18331
19 Ga0075365_10017886 3300006038 Bacteria 4349
20 Ga0075363_100115038 3300006048 Bacteria 1497
21 Ga0070716_100064802 3300006173 Bacteria 2126
22 Ga0075367_10082212 3300006178 Bacteria 1950
23 Ga0075369_10091890 3300006186 Bacteria 1355
24 Ga0157369_10788037 3300013105 Bacteria 977
25 Ga0163163_10511752 3300014325 Bacteria 1263
26 Ga0183367_1001 3300015688 Bacteria 1225545
27 Ga0209758_1006215 3300025297 Bacteria 8717
28 Ga0207426_1000492 3300025302 Bacteria 59345
29 Ga0207426_1000695 3300025302 Bacteria 40356
30 Ga0207647_10022780 3300025904 Bacteria 4155
31 Ga0207705_10909322 3300025909 Bacteria 682
32 Ga0207652_10168584 3300025921 Bacteria 1964
33 Ga0207686_10432435 3300025934 Bacteria 1009
34 Ga0207661_10329450 3300025944 Bacteria 1374
35 Ga0207702_10096754 3300026078 Bacteria 2597
36 Ga0207674_10356018 3300026116 Bacteria 1415
37 Ga0268266_10057866 3300028379 Bacteria 3337
38 Ga0307517_10001714 3300028786 Bacteria 36146
39 Ga0307517_10164972 3300028786 Bacteria 1474
40 Ga0307515_10002811 3300028794 Bacteria 37032
41 Ga0307515_10014250 3300028794 Bacteria 14769
42 Ga0307515_10051093 3300028794 Bacteria 6175
43 Ga0307515_10372768 3300028794 Bacteria 1063
44 Ga0307511_10002619 3300030521 Bacteria 18768
45 Ga0307511_10014919 3300030521 Bacteria 7542
46 Ga0307511_10018346 3300030521 Bacteria 6687
47 Ga0307512_10002681 3300030522 Bacteria 21915
48 Ga0307512_10031512 3300030522 Bacteria 4590
49 Ga0307512_10035088 3300030522 Bacteria 4281
50 Ga0307512_10043379 3300030522 Bacteria 3710
51 Ga0307513_10019877 3300031456 Bacteria 7979
52 Ga0307513_10116700 3300031456 Bacteria 2648
53 Ga0307513_10160281 3300031456 Bacteria 2143
54 Ga0307509_10021793 3300031507 Bacteria 7237
55 Ga0307509_10025843 3300031507 Bacteria 6557
56 Ga0307509_10047815 3300031507 Bacteria 4599
57 Ga0307509_10220557 3300031507 Bacteria 1710
58 Ga0307508_10004331 3300031616 Bacteria 13887
59 Ga0307508_10017783 3300031616 Bacteria 6466
60 Ga0307508_10041335 3300031616 Bacteria 4138
61 Ga0307508_10045230 3300031616 Bacteria 3934
62 Ga0307508_10078480 3300031616 Bacteria 2882
63 Ga0307508_10619800 3300031616 Bacteria 685
64 Ga0307514_10029695 3300031649 Bacteria 4393
65 Ga0307514_10118235 3300031649 Bacteria 1857
66 Ga0307514_10131392 3300031649 Bacteria 1723
67 Ga0307514_10147023 3300031649 Bacteria 1590
68 Ga0307514_10180830 3300031649 Bacteria 1359
69 Ga0307516_10023444 3300031730 Bacteria 6326
70 Ga0307516_10041796 3300031730 Bacteria 4553
71 Ga0307516_10094604 3300031730 Bacteria 2811
72 Ga0307516_10123593 3300031730 Bacteria 2375
73 Ga0307516_10125355 3300031730 Bacteria 2354
74 Ga0307516_10399281 3300031730 Bacteria 1034
75 Ga0307518_10012188 3300031838 Bacteria 6145
76 Ga0307518_10068806 3300031838 Bacteria 2565
77 Ga0307518_10140632 3300031838 Bacteria 1684
78 Ga0307507_10016027 3300033179 Bacteria 8760
79 Ga0307510_10007945 3300033180 Bacteria 12627
80 Ga0307510_10100305 3300033180 Bacteria 2690
81 Ga0307510_10156308 3300033180 Bacteria 1886
82 Ga0451802_0416170 3300041460 Bacteria 1220
83 Ga0451841_1012367 3300041498 Bacteria 1642
84 Ga0451853_1802897 3300041512 Bacteria 2981
85 Ga0451853_3344504 3300041512 Bacteria 2572
86 Ga0439449_0001634 3300042007 Bacteria 8793
87 Ga0439458_0010126 3300042157 Bacteria 2100
88 Ga0466972_0005370 3300044658 Bacteria 6419
89 Ga0466972_0024732 3300044658 Bacteria 2980
90 Ga0466965_0003072 3300044683 Bacteria 7270
91 Ga0466966_0001915 3300044684 Bacteria 13489
92 Ga0466966_0007603 3300044684 Bacteria 7182
93 Ga0466961_0001166 3300044693 Bacteria 16180
94 Ga0466961_0062063 3300044693 Bacteria 2375
95 Ga0466963_0018622 3300044694 Bacteria 4344
96 Ga0466964_0000383 3300044706 Bacteria 13414
97 Ga0466971_0001027 3300044719 Bacteria 11544
98 Ga0466971_0056944 3300044719 Bacteria 1763
99 Ga0466968_0174532 3300044735 Bacteria 997
100 Ga0466970_0004863 3300044765 Bacteria 6632
101 Ga0466957_0002129 3300044842 Bacteria 10604
102 Ga0466960_0359637 3300044901 Bacteria 832
103 Ga0466959_0001212 3300045049 Bacteria 15562
104 Ga0466959_0076812 3300045049 Bacteria 2411
105 Ga0466958_0001329 3300045836 Bacteria 11666
106 Ga0466967_0000390 3300045976 Bacteria 20511
107 Ga0495617_167576 3300046452 Bacteria 694
108 Ga0495592_0008991 3300046454 Bacteria 7506
109 Ga0495592_0231987 3300046454 Bacteria 1228
110 Ga0495592_0604466 3300046454 Bacteria 668
111 Ga0495603_0005686 3300046455 Bacteria 7450
112 Ga0495603_0019612 3300046455 Bacteria 4093
113 Ga0495603_0020103 3300046455 Bacteria 4046
114 Ga0495590_0026907 3300046457 Bacteria 2019
115 Ga0495590_0173724 3300046457 Bacteria 786
116 Ga0495629_0003009 3300046459 Bacteria 12825
117 Ga0495629_0018122 3300046459 Bacteria 5044
118 Ga0495629_0033603 3300046459 Bacteria 3627
119 Ga0495629_0078097 3300046459 Bacteria 2311
120 Ga0495629_0094986 3300046459 Bacteria 2080
121 Ga0495629_0152165 3300046459 Bacteria 1608
122 Ga0495629_0514805 3300046459 Bacteria 806
123 Ga0495651_0058243 3300046462 Bacteria 2964
124 Ga0495651_0278427 3300046462 Bacteria 1131
125 Ga0495653_0377556 3300046463 Bacteria 906
126 Ga0495605_0072671 3300046474 Bacteria 1621
127 Ga0495639_0024348 3300046475 Bacteria 2665
128 Ga0495662_0001198 3300046476 Bacteria 12809
129 Ga0495662_0005574 3300046476 Bacteria 6299
130 Ga0495662_0008511 3300046476 Bacteria 5042
131 Ga0495662_0008529 3300046476 Bacteria 5037
132 Ga0495662_0277753 3300046476 Bacteria 825
133 Ga0495664_0000843 3300046477 Bacteria 15738
134 Ga0495585_0110366 3300046492 Bacteria 1463
135 Ga0495594_0008331 3300046499 Bacteria 5339
136 Ga0495594_0112586 3300046499 Bacteria 1535
137 Ga0495594_0191452 3300046499 Bacteria 1165
138 Ga0495607_0052272 3300046501 Bacteria 2367
139 Ga0495583_0078630 3300046506 Bacteria 1436
140 Ga0495606_0017694 3300046507 Bacteria 5377
141 Ga0495608_0068871 3300046511 Bacteria 2313
142 Ga0495610_0053422 3300046512 Bacteria 1957
143 Ga0495616_0014075 3300046513 Bacteria 4491
144 Ga0495618_0091077 3300046514 Bacteria 1949
145 Ga0495618_0190788 3300046514 Bacteria 1299
146 Ga0495620_0005007 3300046515 Bacteria 7424
147 Ga0495620_0018911 3300046515 Bacteria 3403
148 Ga0495628_0091856 3300046516 Bacteria 2349
149 Ga0495628_0119961 3300046516 Bacteria 2018
150 Ga0495631_0031688 3300046518 Bacteria 2388
151 Ga0495643_0033851 3300046522 Bacteria 2822
152 Ga0495648_0053739 3300046524 Bacteria 2438
153 Ga0495666_0192453 3300046526 Bacteria 939
154 Ga0495652_0012839 3300046529 Bacteria 7546
155 Ga0495640_0011724 3300046533 Bacteria 6730
156 Ga0495640_0080943 3300046533 Bacteria 2159
157 Ga0495586_0216518 3300046535 Bacteria 1088
158 Ga0495597_0077822 3300046542 Bacteria 1421
159 Ga0495645_0055698 3300046543 Bacteria 2871
160 Ga0495622_0005259 3300046557 Bacteria 6001
161 Ga0495622_0096022 3300046557 Bacteria 1360
162 Ga0495622_0112060 3300046557 Bacteria 1249
163 Ga0495633_0257590 3300046558 Bacteria 795
164 Ga0495667_0397619 3300046559 Bacteria 868
165 Ga0495668_0049576 3300046616 Bacteria 2328
166 Ga0495668_0246496 3300046616 Bacteria 978
167 Ga0495611_0051179 3300046648 Bacteria 1861
168 Ga0495625_0002674 3300046660 Bacteria 18955
169 Ga0495625_0064593 3300046660 Bacteria 2581
170 Ga0495625_0199509 3300046660 Bacteria 1321
171 Ga0495635_0000520 3300046663 Bacteria 24388
172 Ga0495635_0039847 3300046663 Bacteria 3249
173 Ga0495635_0238541 3300046663 Bacteria 1227
174 Ga0495635_0245045 3300046663 Bacteria 1209
175 Ga0495588_0009896 3300046674 Bacteria 4419
176 Ga0495588_0013045 3300046674 Bacteria 3950
177 Ga0495657_0004158 3300046675 Bacteria 11592
178 Ga0495657_0061019 3300046675 Bacteria 2495
179 Ga0495657_0076759 3300046675 Bacteria 2169
180 Ga0495599_0211354 3300046678 Bacteria 1189
181 Ga0495623_0312547 3300046679 Bacteria 865
182 Ga0495646_0005581 3300046680 Bacteria 7956
183 Ga0495658_0009080 3300046683 Bacteria 4943
184 Ga0495658_0087277 3300046683 Bacteria 1842
185 Ga0495613_0001531 3300046689 Bacteria 17600
186 Ga0495613_0024713 3300046689 Bacteria 4475
187 Ga0495613_0035332 3300046689 Bacteria 3709
188 Ga0495613_0065305 3300046689 Bacteria 2659
189 Ga0495613_0078955 3300046689 Bacteria 2393
190 Ga0495613_0135197 3300046689 Bacteria 1764
191 Ga0495613_0149241 3300046689 Bacteria 1668
192 Ga0495624_0034710 3300046690 Bacteria 3261
193 Ga0495624_0040173 3300046690 Bacteria 2997
194 Ga0495671_0003739 3300046692 Bacteria 9257
195 Ga0495649_0101789 3300046694 Bacteria 1526
196 Ga0495649_0129388 3300046694 Bacteria 1332
197 Ga0495589_0011659 3300046794 Bacteria 4563
198 Ga0495589_0072235 3300046794 Bacteria 1685
199 Ga0495660_0150514 3300046810 Bacteria 1149
200 Ga0495581_0080278 3300047315 Bacteria 1888
201 Ga0495604_0011484 3300047317 Bacteria 7033
202 Ga0495604_0017780 3300047317 Bacteria 5688
203 Ga0495636_0010590 3300047318 Bacteria 3644
204 Ga0495636_0014037 3300047318 Bacteria 3184
205 Ga0495636_0049446 3300047318 Bacteria 1758
206 Ga0495676_0003597 3300047321 Bacteria 14067
207 Ga0495676_0025919 3300047321 Bacteria 5053
208 Ga0495676_0062539 3300047321 Bacteria 2905
209 Ga0495680_0040523 3300047322 Bacteria 3710
210 Ga0495683_0038595 3300047323 Bacteria 2417
211 Ga0495683_0204459 3300047323 Bacteria 888
212 Ga0495687_009967 3300047443 Bacteria 5255
213 Ga0495687_012764 3300047443 Bacteria 4423
214 Ga0495687_039323 3300047443 Bacteria 2093
215 Ga0495687_056726 3300047443 Bacteria 1632
216 Ga0495687_068456 3300047443 Bacteria 1433
217 Ga0495675_0138463 3300047444 Bacteria 1510
218 Ga0495675_0276893 3300047444 Bacteria 1001
219 Ga0495677_0078341 3300047445 Bacteria 1237
220 Ga0495685_007840 3300047447 Bacteria 3533
221 Ga0495685_018949 3300047447 Bacteria 2363
222 Ga0495685_036612 3300047447 Bacteria 1684
223 Ga0495681_0004310 3300047470 Bacteria 9736
224 Ga0495681_0095195 3300047470 Bacteria 1309
225 Ga0495686_0064703 3300047472 Bacteria 2263
226 Ga0495686_0142915 3300047472 Bacteria 1411
227 Ga0495593_0000647 3300047673 Bacteria 20045
228 Ga0495593_0015754 3300047673 Bacteria 4274
229 Ga0495593_0103498 3300047673 Bacteria 1458
230 Ga0495602_0024162 3300048088 Bacteria 5900
231 Ga0495602_0146160 3300048088 Bacteria 1865
232 Ga0495614_0004386 3300048089 Bacteria 6360
233 Ga0495614_0042548 3300048089 Bacteria 1947
234 Ga0495614_0048987 3300048089 Bacteria 1811
235 Ga0495614_0120519 3300048089 Bacteria 1156
236 Ga0495614_0235725 3300048089 Bacteria 834
237 Ga0495614_0256225 3300048089 Bacteria 801
238 Ga0495626_0075238 3300048091 Bacteria 1510
239 Ga0496102_0926114 3300048905 Bacteria 793
240 Ga0496109_0538257 3300048912 Bacteria 1102
241 Ga0496112_1037183 3300048915 Bacteria 739
242 Ga0496113_0368363 3300048916 Bacteria 1153
243 Ga0495678_043315 3300049459 Bacteria 1788
244 Ga0501032_0076067 3300049569 Bacteria 2236
245 Ga0501034_0019702 3300049571 Bacteria 6896
246 Ga0501038_0005654 3300049574 Bacteria 11602
247 Ga0501047_0331941 3300049581 Bacteria 1359
248 Ga0501070_0313037 3300049586 Bacteria 1278
249 Ga0501044_0975074 3300049823 Bacteria 720
250 nmdc:mga03n38_44635_c1 3300050490 Bacteria 1948
251 Ga0500610_0239837 3300053079 Bacteria 844
252 Ga0495619_0033616 3300053085 Bacteria 3331
253 Ga0500644_0045214 3300053088 Bacteria 1482
254 Ga0500583_0195964 3300053092 Bacteria 1005
255 Ga0500641_0096263 3300053096 Bacteria 1267
256 Ga0500553_045654 3300053101 Bacteria 2125
257 Ga0500560_000063 3300053107 Bacteria 10180
258 Ga0500562_039953 3300053108 Bacteria 1247
259 Ga0500594_0013081 3300053118 Bacteria 1967
260 Ga0500614_029783 3300053123 Bacteria 1327
261 Ga0500573_0362413 3300053140 Bacteria 700
262 Ga0500624_012626 3300053157 Bacteria 1252
263 Ga0500633_0064291 3300053160 Bacteria 1297
264 Ga0500636_0341484 3300053177 Bacteria 719
265 Ga0466962_0005197 3300061719 Bacteria 6263
266 Ga0466962_0029925 3300061719 Bacteria 2607
267 2643946790 2643221587 Bacteria 7586415
268 2585311844 2582581314 Bacteria 11452267
269 2616693482 2616644814 Bacteria 11555299
270 2623591288 2622736626 Bacteria 7181580
271 2644019040 2643221601 Bacteria 7493239
272 2644180173 2643221631 Bacteria 8168043
273 2644434971 2643221677 Bacteria 7584031
274 2644438010 2643221678 Bacteria 9540101
275 2644631131 2643221714 Bacteria 9015452
276 2676482126 2675903059 Bacteria 8644972
277 2793979322 2791355406 Bacteria 11364898
278 2808845154 2808606359 Bacteria 9866990
279 2808914748 2808606375 Bacteria 9466072
280 2855686604 2855683550 Bacteria 7134265
281 2862283231 2862281513 Bacteria 9621493
282 2867303473 2867302475 Bacteria 7087181
283 2867316170 2867312974 Bacteria 7058875
284 2867321036 2867319477 Bacteria 7069771
285 2918508551 2918501144 Bacteria 8668083
286 2919471036 2919468124 Bacteria 9133025
287 2946079026 2946072368 Bacteria 8999607
288 2997607270 2997600082 Bacteria 9896405
289 3006399062 3006393351 Bacteria 6615579
290 8003872999 8003870546 Bacteria 7396674
291 8008575982 8008574985 Bacteria 7815457
292 8047901791 8047893842 Bacteria 11723082
293 8048357100 8048356638 Bacteria 11044339
294 8048378727 8048369669 Bacteria 11666822
295 8048387829 8048379754 Bacteria 11877923
296 8056834282 8056829672 Bacteria 9045328
297 JGI24739J22299_10034858
298 JGI25406J46586_10030640
299 rootH1_10007013
300 JGI25160J50197_1000875
301 Ga0006562J51391_1179653
302 Ga0006562J51391_1179654
303 Ga0070658_10995937
304 Ga0070683_100282301
305 Ga0070682_100181439
306 Ga0070660_100474389
307 Ga0070713_101261409
308 Ga0070681_10592706
309 Ga0070679_100288513
310 Ga0070684_100072373
311 Ga0070665_100074326
312 Ga0068857_100384984
313 Ga0068856_100216481
314 Ga0081539_10003688
315 Ga0075365_10017886
316 Ga0075363_100115038
317 Ga0070716_100064802
318 Ga0075367_10082212
319 Ga0075369_10091890
320 Ga0157369_10788037
321 Ga0163163_10511752
322 Ga0183367_1001
323 Ga0209758_1006215
324 Ga0207426_1000492
325 Ga0207426_1000695
326 Ga0207647_10022780
327 Ga0207705_10909322
328 Ga0207652_10168584
329 Ga0207686_10432435
330 Ga0207661_10329450
331 Ga0207702_10096754
332 Ga0207674_10356018
333 Ga0268266_10057866
334 Ga0307517_10001714
335 Ga0307517_10164972
336 Ga0307515_10002811
337 Ga0307515_10014250
338 Ga0307515_10051093
339 Ga0307515_10372768
340 Ga0307511_10002619
341 Ga0307511_10014919
342 Ga0307511_10018346
343 Ga0307512_10002681
344 Ga0307512_10031512
345 Ga0307512_10035088
346 Ga0307512_10043379
347 Ga0307513_10019877
348 Ga0307513_10116700
349 Ga0307513_10160281
350 Ga0307509_10021793
351 Ga0307509_10025843
352 Ga0307509_10047815
353 Ga0307509_10220557
354 Ga0307508_10004331
355 Ga0307508_10017783
356 Ga0307508_10041335
357 Ga0307508_10045230
358 Ga0307508_10078480
359 Ga0307508_10619800
360 Ga0307514_10029695
361 Ga0307514_10118235
362 Ga0307514_10131392
363 Ga0307514_10147023
364 Ga0307514_10180830
365 Ga0307516_10023444
366 Ga0307516_10041796
367 Ga0307516_10094604
368 Ga0307516_10123593
369 Ga0307516_10125355
370 Ga0307516_10399281
371 Ga0307518_10012188
372 Ga0307518_10068806
373 Ga0307518_10140632
374 Ga0307507_10016027
375 Ga0307510_10007945
376 Ga0307510_10100305
377 Ga0307510_10156308
378 Ga0451802_0416170
379 Ga0451841_1012367
380 Ga0451853_1802897
381 Ga0451853_3344504
382 Ga0439449_0001634
383 Ga0439458_0010126
384 Ga0466972_0005370
385 Ga0466972_0024732
386 Ga0466965_0003072
387 Ga0466966_0001915
388 Ga0466966_0007603
389 Ga0466961_0001166
390 Ga0466961_0062063
391 Ga0466963_0018622
392 Ga0466964_0000383
393 Ga0466971_0001027
394 Ga0466971_0056944
395 Ga0466968_0174532
396 Ga0466970_0004863
397 Ga0466957_0002129
398 Ga0466960_0359637
399 Ga0466959_0001212
400 Ga0466959_0076812
401 Ga0466958_0001329
402 Ga0466967_0000390
403 Ga0495617_167576
404 Ga0495592_0008991
405 Ga0495592_0231987
406 Ga0495592_0604466
407 Ga0495603_0005686
408 Ga0495603_0019612
409 Ga0495603_0020103
410 Ga0495590_0026907
411 Ga0495590_0173724
412 Ga0495629_0003009
413 Ga0495629_0018122
414 Ga0495629_0033603
415 Ga0495629_0078097
416 Ga0495629_0094986
417 Ga0495629_0152165
418 Ga0495629_0514805
419 Ga0495651_0058243
420 Ga0495651_0278427
421 Ga0495653_0377556
422 Ga0495605_0072671
423 Ga0495639_0024348
424 Ga0495662_0001198
425 Ga0495662_0005574
426 Ga0495662_0008511
427 Ga0495662_0008529
428 Ga0495662_0277753
429 Ga0495664_0000843
430 Ga0495585_0110366
431 Ga0495594_0008331
432 Ga0495594_0112586
433 Ga0495594_0191452
434 Ga0495607_0052272
435 Ga0495583_0078630
436 Ga0495606_0017694
437 Ga0495608_0068871
438 Ga0495610_0053422
439 Ga0495616_0014075
440 Ga0495618_0091077
441 Ga0495618_0190788
442 Ga0495620_0005007
443 Ga0495620_0018911
444 Ga0495628_0091856
445 Ga0495628_0119961
446 Ga0495631_0031688
447 Ga0495643_0033851
448 Ga0495648_0053739
449 Ga0495666_0192453
450 Ga0495652_0012839
451 Ga0495640_0011724
452 Ga0495640_0080943
453 Ga0495586_0216518
454 Ga0495597_0077822
455 Ga0495645_0055698
456 Ga0495622_0005259
457 Ga0495622_0096022
458 Ga0495622_0112060
459 Ga0495633_0257590
460 Ga0495667_0397619
461 Ga0495668_0049576
462 Ga0495668_0246496
463 Ga0495611_0051179
464 Ga0495625_0002674
465 Ga0495625_0064593
466 Ga0495625_0199509
467 Ga0495635_0000520
468 Ga0495635_0039847
469 Ga0495635_0238541
470 Ga0495635_0245045
471 Ga0495588_0009896
472 Ga0495588_0013045
473 Ga0495657_0004158
474 Ga0495657_0061019
475 Ga0495657_0076759
476 Ga0495599_0211354
477 Ga0495623_0312547
478 Ga0495646_0005581
479 Ga0495658_0009080
480 Ga0495658_0087277
481 Ga0495613_0001531
482 Ga0495613_0024713
483 Ga0495613_0035332
484 Ga0495613_0065305
485 Ga0495613_0078955
486 Ga0495613_0135197
487 Ga0495613_0149241
488 Ga0495624_0034710
489 Ga0495624_0040173
490 Ga0495671_0003739
491 Ga0495649_0101789
492 Ga0495649_0129388
493 Ga0495589_0011659
494 Ga0495589_0072235
495 Ga0495660_0150514
496 Ga0495581_0080278
497 Ga0495604_0011484
498 Ga0495604_0017780
499 Ga0495636_0010590
500 Ga0495636_0014037
501 Ga0495636_0049446
502 Ga0495676_0003597
503 Ga0495676_0025919
504 Ga0495676_0062539
505 Ga0495680_0040523
506 Ga0495683_0038595
507 Ga0495683_0204459
508 Ga0495687_009967
509 Ga0495687_012764
510 Ga0495687_039323
511 Ga0495687_056726
512 Ga0495687_068456
513 Ga0495675_0138463
514 Ga0495675_0276893
515 Ga0495677_0078341
516 Ga0495685_007840
517 Ga0495685_018949
518 Ga0495685_036612
519 Ga0495681_0004310
520 Ga0495681_0095195
521 Ga0495686_0064703
522 Ga0495686_0142915
523 Ga0495593_0000647
524 Ga0495593_0015754
525 Ga0495593_0103498
526 Ga0495602_0024162
527 Ga0495602_0146160
528 Ga0495614_0004386
529 Ga0495614_0042548
530 Ga0495614_0048987
531 Ga0495614_0120519
532 Ga0495614_0235725
533 Ga0495614_0256225
534 Ga0495626_0075238
535 Ga0496102_0926114
536 Ga0496109_0538257
537 Ga0496112_1037183
538 Ga0496113_0368363
539 Ga0495678_043315
540 Ga0501032_0076067
541 Ga0501034_0019702
542 Ga0501038_0005654
543 Ga0501047_0331941
544 Ga0501070_0313037
545 Ga0501044_0975074
546 nmdc:mga03n38_44635_c1
547 Ga0500610_0239837
548 Ga0495619_0033616
549 Ga0500644_0045214
550 Ga0500583_0195964
551 Ga0500641_0096263
552 Ga0500553_045654
553 Ga0500560_000063
554 Ga0500562_039953
555 Ga0500594_0013081
556 Ga0500614_029783
557 Ga0500573_0362413
558 Ga0500624_012626
559 Ga0500633_0064291
560 Ga0500636_0341484
561 Ga0466962_0005197
562 Ga0466962_0029925
563 2643946790
564 2585311844
565 2616693482
566 2623591288
567 2644019040
568 2644180173
569 2644434971
570 2644438010
571 2644631131
572 2676482126
573 2793979322
574 2808845154
575 2808914748
576 2855686604
577 2862283231
578 2867303473
579 2867316170
580 2867321036
581 2918508551
582 2919471036
583 2946079026
584 2997607270
585 3006399062
586 8003872999
587 8008575982
588 8047901791
589 8048357100
590 8048378727
591 8048387829
592 8056834282

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

30

76

0.93

PF13305

TetR_C_33

Tetracyclin repressor-like, C-terminal domain

102

203

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3on2-assembly3.cif.gz_C structure of a protein with unknown function from rhodococcus sp. rha1 0.8331 8 187
3cjd-assembly1.cif.gz_A crystal structure of putative tetr transcriptional regulator (yp_510936.1) from jannaschia sp. ccs1 at 1.79 a resolution 0.8276 6 189
3cjd-assembly1.cif.gz_A crystal structure of putative tetr transcriptional regulator (yp_510936.1) from jannaschia sp. ccs1 at 1.79 a resolution 0.8193 6 189
1zk8-assembly1.cif.gz_B crystal structure of transcriptional regulator from bacillus cereus atcc 14579 0.8179 9 189
3on2-assembly1.cif.gz_A structure of a protein with unknown function from rhodococcus sp. rha1 0.8076 8 187
ID Description Score Start End Superfamily
3zqlD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9433 9 61 1.10.10.60
3zqlC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9425 9 61 1.10.10.60
2y31B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9297 9 61 1.10.10.60
2y2zA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9297 9 61 1.10.10.60
2y31A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9269 9 61 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A1Q5J4L7-F1-model_v4 TetR family transcriptional regulator 0.9796 9 191 GO:0000976
GO:0003700
AF-A0A2P8QGD2-F1-model_v4 TetR family transcriptional regulator 0.9742 4 191 GO:0000976
GO:0003700
AF-A0A3R9VCZ0-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9737 7 191 GO:0000976
GO:0003700
AF-A0A6I5CQ01-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9628 56 188 GO:0003677
AF-A0A2G6ZYS6-F1-model_v4 deleted 0.9608 3 191

Map