F393242

General Info

Members Datasets Scaffolds Average Seq Length
296 191 592 437

Family's Representative Sequence

Representative Sequence 3300026095|Ga0207676_10024115|Ga0207676_100241152
Length 504
Sequence VSFRNCPPKLGGQHDRDEVEIVRGVVPKPHHFKVRLGTVSRGIAFQTRTHRANDHIDMNKSIVIVDDEPNIGPSLQLILEREGYSVSIYRSAQDFAARHSARRTDAYLLDVRLPDGNGIDILRSLRQADQRAPVIMISGHGSIADAVEATRNGAFDFLEKPLARDRVLLVLKNALEQASLRKENERYREIVGEGPKMVGSSAAFAHAVEQAARVARSDARVLLQGESGTGKELLASHIHRESPFAHGPFVKVNCAAIPTELIESELFGHEKGSFTGAATMRRGKFELADGGTIFLDEVGDLHEASQAKLLRVLQEGEFQRVGGEHTVRVSVRVVSATNRNLSEMVTQNRFREDLYYRLSVVPIRVPALRDRPEDIRPLAEYFLADFCSRNNFKPKRIDDAVFPTLEAYAWPGNARELRNTIERMAILSPDDRLTTNYIPLEIRFQPDVSLRSTLQDSRESAERERIFEALEQTEWNVSAAARILNIERTNLHKRMRALGLNRGS

Samples

Sample ID Description Type Environment
1 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
106 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
107 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
111 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
112 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
113 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
114 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
115 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
119 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
125 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
132 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
133 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
134 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
140 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
141 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
146 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
150 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
168 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
169 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
174 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
178 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
181 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
182 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
183 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
184 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
185 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
188 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
189 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.04
Nodule 0
Rhizoplane 2.03
Rhizosphere 93.58
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207676_10024115 3300026095 Bacteria 4499
2 Ga0065704_10010002 3300005289 Bacteria 2494
3 Ga0065715_10091042 3300005293 Bacteria 6182
4 Ga0065715_10095561 3300005293 Bacteria 4058
5 Ga0065707_10088905 3300005295 Bacteria 4520
6 Ga0070683_100000001 3300005329 Bacteria 529385
7 Ga0070683_100009841 3300005329 Bacteria 8192
8 Ga0070683_100018713 3300005329 Bacteria 6139
9 Ga0070683_100034410 3300005329 Bacteria 4628
10 Ga0070683_100075284 3300005329 Bacteria 3154
11 Ga0070690_100006944 3300005330 Bacteria 6443
12 Ga0070670_100001826 3300005331 Bacteria 17325
13 Ga0070670_100167379 3300005331 Bacteria 1906
14 Ga0070666_10002968 3300005335 Bacteria 10287
15 Ga0070680_100058297 3300005336 Bacteria 3158
16 Ga0070661_100013644 3300005344 Bacteria 5706
17 Ga0070669_100000399 3300005353 Bacteria 33282
18 Ga0070675_100011445 3300005354 Bacteria 6945
19 Ga0070671_100013404 3300005355 Bacteria 6609
20 Ga0070688_100007123 3300005365 Bacteria 6019
21 Ga0070667_100001651 3300005367 Bacteria 19943
22 Ga0070713_100091385 3300005436 Bacteria 2619
23 Ga0070713_100272411 3300005436 Bacteria 1550
24 Ga0070711_100115344 3300005439 Bacteria 1978
25 Ga0070681_10008550 3300005458 Bacteria 10028
26 Ga0070681_10012546 3300005458 Bacteria 8410
27 Ga0070681_10063825 3300005458 Bacteria 3655
28 Ga0068867_100254526 3300005459 Bacteria 1429
29 Ga0070706_100253274 3300005467 Bacteria 1644
30 Ga0070707_100005659 3300005468 Bacteria 11673
31 Ga0070699_100020525 3300005518 Bacteria 5700
32 Ga0070679_100098220 3300005530 Bacteria 2916
33 Ga0070684_100000279 3300005535 Bacteria 35455
34 Ga0068853_100041164 3300005539 Bacteria 3945
35 Ga0068853_100118549 3300005539 Bacteria 2359
36 Ga0070672_100001946 3300005543 Bacteria 12948
37 Ga0070696_100003991 3300005546 Bacteria 9835
38 Ga0070665_100365236 3300005548 Bacteria 1450
39 Ga0068855_100009965 3300005563 Bacteria 11454
40 Ga0068855_100238220 3300005563 Bacteria 2034
41 Ga0070664_100006627 3300005564 Bacteria 9339
42 Ga0068857_100031358 3300005577 Bacteria 4696
43 Ga0068857_100220748 3300005577 Bacteria 1731
44 Ga0068856_100012748 3300005614 Bacteria 8139
45 Ga0068856_100084449 3300005614 Bacteria 3154
46 Ga0068852_100008980 3300005616 Bacteria 7398
47 Ga0068864_100042582 3300005618 Bacteria 3886
48 Ga0068864_100192623 3300005618 Bacteria 1870
49 Ga0068870_10006539 3300005840 Bacteria 5141
50 Ga0068863_100051225 3300005841 Bacteria 3914
51 Ga0068862_100015338 3300005844 Bacteria 6364
52 Ga0070717_10080206 3300006028 Bacteria 2738
53 Ga0075368_10007156 3300006042 Bacteria 3931
54 Ga0075364_10000629 3300006051 Bacteria 18191
55 Ga0075364_10008770 3300006051 Bacteria 6050
56 Ga0075367_10002852 3300006178 Bacteria 8034
57 Ga0097621_100028935 3300006237 Bacteria 4372
58 Ga0097621_100086331 3300006237 Bacteria 2619
59 Ga0075370_10002500 3300006353 Bacteria 8536
60 Ga0068871_100173353 3300006358 Bacteria 1850
61 Ga0075428_100002032 3300006844 Bacteria 21801
62 Ga0075428_100010874 3300006844 Bacteria 10118
63 Ga0075428_100019744 3300006844 Bacteria 7456
64 Ga0075430_100001620 3300006846 Bacteria 18392
65 Ga0075430_100006461 3300006846 Bacteria 9875
66 Ga0075430_100217144 3300006846 Bacteria 1587
67 Ga0075431_100004668 3300006847 Bacteria 13456
68 Ga0075431_100010840 3300006847 Bacteria 9168
69 Ga0075431_100030992 3300006847 Bacteria 5508
70 Ga0075429_100001052 3300006880 Bacteria 22026
71 Ga0075429_100003907 3300006880 Bacteria 12732
72 Ga0105240_10001669 3300009093 Bacteria 37675
73 Ga0105240_10005110 3300009093 Bacteria 19641
74 Ga0105240_10037781 3300009093 Bacteria 6203
75 Ga0105240_10061646 3300009093 Bacteria 4674
76 Ga0111539_10000640 3300009094 Bacteria 45232
77 Ga0111539_10007864 3300009094 Bacteria 13616
78 Ga0111539_10035921 3300009094 Bacteria 5998
79 Ga0111539_10216086 3300009094 Bacteria 2233
80 Ga0105245_10011221 3300009098 Bacteria 7799
81 Ga0105245_10036264 3300009098 Bacteria 4380
82 Ga0114129_10000924 3300009147 Bacteria 38328
83 Ga0114129_10015592 3300009147 Bacteria 10806
84 Ga0114129_10361581 3300009147 Bacteria 1920
85 Ga0114129_10433435 3300009147 Bacteria 1727
86 Ga0105241_10024415 3300009174 Bacteria 4488
87 Ga0105248_10002121 3300009177 Bacteria 21946
88 Ga0105248_10003076 3300009177 Bacteria 18501
89 Ga0105248_10186447 3300009177 Bacteria 2338
90 Ga0105237_10010835 3300009545 Bacteria 9674
91 Ga0105237_10013468 3300009545 Bacteria 8574
92 Ga0105237_10050176 3300009545 Bacteria 4193
93 Ga0105237_10129628 3300009545 Bacteria 2517
94 Ga0105238_10004574 3300009551 Bacteria 13680
95 Ga0105238_10124744 3300009551 Bacteria 2554
96 Ga0105238_10173037 3300009551 Bacteria 2136
97 Ga0105249_10003819 3300009553 Bacteria 13002
98 Ga0105239_10016063 3300010375 Bacteria 8283
99 Ga0105239_10034719 3300010375 Bacteria 5540
100 Ga0105239_10178966 3300010375 Bacteria 2372
101 Ga0105246_10119992 3300011119 Bacteria 1947
102 Ga0157370_10003281 3300013104 Bacteria 19071
103 Ga0157369_10015552 3300013105 Bacteria 8577
104 Ga0157369_10020844 3300013105 Bacteria 7327
105 Ga0157369_10034684 3300013105 Bacteria 5535
106 Ga0157369_10037553 3300013105 Bacteria 5302
107 Ga0163162_10024104 3300013306 Bacteria 6005
108 Ga0163162_10380442 3300013306 Bacteria 1545
109 Ga0157375_10012854 3300013308 Bacteria 7436
110 Ga0163163_10000775 3300014325 Bacteria 27113
111 Ga0163163_10033780 3300014325 Bacteria 4950
112 Ga0157377_10032487 3300014745 Bacteria 2842
113 Ga0157376_10018484 3300014969 Bacteria 5346
114 Ga0157376_10179383 3300014969 Bacteria 1935
115 Ga0213876_10053583 3300021384 Bacteria 2130
116 Ga0207643_10019711 3300025908 Bacteria 3697
117 Ga0207654_10005824 3300025911 Bacteria 6214
118 Ga0207707_10003242 3300025912 Bacteria 14445
119 Ga0207707_10006701 3300025912 Bacteria 10050
120 Ga0207707_10015500 3300025912 Bacteria 6639
121 Ga0207695_10002549 3300025913 Bacteria 26774
122 Ga0207695_10011055 3300025913 Bacteria 10967
123 Ga0207695_10063968 3300025913 Bacteria 3790
124 Ga0207671_10008124 3300025914 Bacteria 8954
125 Ga0207657_10046595 3300025919 Bacteria 3797
126 Ga0207652_10012800 3300025921 Bacteria 6784
127 Ga0207652_10120334 3300025921 Bacteria 2336
128 Ga0207646_10004452 3300025922 Bacteria 15194
129 Ga0207681_10008439 3300025923 Bacteria 6298
130 Ga0207681_10183407 3300025923 Bacteria 1596
131 Ga0207694_10015190 3300025924 Bacteria 5807
132 Ga0207694_10017257 3300025924 Bacteria 5456
133 Ga0207650_10007184 3300025925 Bacteria 7591
134 Ga0207659_10176445 3300025926 Bacteria 1689
135 Ga0207687_10025130 3300025927 Bacteria 3985
136 Ga0207644_10021528 3300025931 Bacteria 4393
137 Ga0207706_10197159 3300025933 Bacteria 1766
138 Ga0207709_10052120 3300025935 Bacteria 2511
139 Ga0207691_10097034 3300025940 Bacteria 2635
140 Ga0207691_10112621 3300025940 Bacteria 2418
141 Ga0207711_10200425 3300025941 Bacteria 1821
142 Ga0207661_10000005 3300025944 Bacteria 557888
143 Ga0207661_10264024 3300025944 Bacteria 1534
144 Ga0207679_10039652 3300025945 Bacteria 3366
145 Ga0207679_10073796 3300025945 Bacteria 2583
146 Ga0207667_10019050 3300025949 Bacteria 7672
147 Ga0207667_10031528 3300025949 Bacteria 5721
148 Ga0207658_10002479 3300025986 Bacteria 13458
149 Ga0207703_10087861 3300026035 Bacteria 2607
150 Ga0207639_10041063 3300026041 Bacteria 3458
151 Ga0207702_10050859 3300026078 Bacteria 3499
152 Ga0207641_10216873 3300026088 Bacteria 1772
153 Ga0207674_10000598 3300026116 Bacteria 47476
154 Ga0207674_10142899 3300026116 Bacteria 2352
155 Ga0207683_10026215 3300026121 Bacteria 5031
156 Ga0207698_10110176 3300026142 Bacteria 2305
157 Ga0207428_10002645 3300027907 Bacteria 17854
158 Ga0268265_10007845 3300028380 Bacteria 7204
159 Ga0265320_10001099 3300031240 Bacteria 19970
160 Ga0265325_10002248 3300031241 Bacteria 13085
161 Ga0265339_10023770 3300031249 Bacteria 3540
162 Ga0265331_10006083 3300031250 Bacteria 7179
163 Ga0265331_10036334 3300031250 Bacteria 2419
164 Ga0265331_10057664 3300031250 Bacteria 1841
165 Ga0265316_10003112 3300031344 Bacteria 16913
166 Ga0265316_10014281 3300031344 Bacteria 6999
167 Ga0265316_10023019 3300031344 Bacteria 5240
168 Ga0265316_10024931 3300031344 Bacteria 4999
169 Ga0265316_10028932 3300031344 Bacteria 4563
170 Ga0265316_10060966 3300031344 Bacteria 2931
171 Ga0265316_10098252 3300031344 Bacteria 2228
172 Ga0265316_10132466 3300031344 Bacteria 1877
173 Ga0265316_10134222 3300031344 Bacteria 1863
174 Ga0307408_100011692 3300031548 Bacteria 5803
175 Ga0265313_10006825 3300031595 Bacteria 7969
176 Ga0265314_10000541 3300031711 Bacteria 48544
177 Ga0265342_10042550 3300031712 Bacteria 2744
178 Ga0265342_10086249 3300031712 Bacteria 1805
179 Ga0307412_10100787 3300031911 Bacteria 2042
180 Ga0307416_100096548 3300032002 Bacteria 2556
181 Ga0373934_0006545 3300035086 Bacteria 4322
182 Ga0373934_0054266 3300035086 Bacteria 1591
183 Ga0373954_0009466 3300035118 Bacteria 4286
184 Ga0373954_0010365 3300035118 Bacteria 4112
185 Ga0373960_0007248 3300035121 Bacteria 2624
186 Ga0373955_0001642 3300035172 Bacteria 9574
187 Ga0373955_0042916 3300035172 Bacteria 2431
188 Ga0373955_0086048 3300035172 Bacteria 1785
189 Ga0373924_0052656 3300035410 Bacteria 1690
190 Ga0373931_0022849 3300035691 Bacteria 3151
191 Ga0373935_0104297 3300035692 Bacteria 1874
192 Ga0373927_0004759 3300035695 Bacteria 9450
193 Ga0373933_0010645 3300035724 Bacteria 5044
194 Ga0373947_0015128 3300035725 Bacteria 4429
195 Ga0373937_0004799 3300036401 Bacteria 11484
196 Ga0373937_0013184 3300036401 Bacteria 7278
197 Ga0373937_0022573 3300036401 Bacteria 5660
198 Ga0373937_0184982 3300036401 Bacteria 1957
199 Ga0373925_0011554 3300037068 Bacteria 6387
200 Ga0373925_0022088 3300037068 Bacteria 4638
201 Ga0436364_1081453 3300037853 Bacteria 11594
202 Ga0436365_0528631 3300039437 Bacteria 2162
203 Ga0436365_1329105 3300039437 Bacteria 2630
204 Ga0439464_0002164 3300042439 Bacteria 4805
205 Ga0439460_0015860 3300042461 Bacteria 2000
206 Ga0451576_0057381 3300045051 Bacteria 4070
207 Ga0495592_0022556 3300046454 Bacteria 4789
208 Ga0495592_0031975 3300046454 Bacteria 3974
209 Ga0495629_0023336 3300046459 Bacteria 4409
210 Ga0495629_0108494 3300046459 Bacteria 1936
211 Ga0495651_0015110 3300046462 Bacteria 5967
212 Ga0495580_0007867 3300046472 Bacteria 8528
213 Ga0495580_0007923 3300046472 Bacteria 8498
214 Ga0495580_0011890 3300046472 Bacteria 6712
215 Ga0495664_0055880 3300046477 Bacteria 2348
216 Ga0495608_0006123 3300046511 Bacteria 8534
217 Ga0495628_0007109 3300046516 Bacteria 9696
218 Ga0495666_0062904 3300046526 Bacteria 1772
219 Ga0495652_0050718 3300046529 Bacteria 3547
220 Ga0495665_0042825 3300046531 Bacteria 2409
221 Ga0495587_0010311 3300046536 Bacteria 5953
222 Ga0495645_0006573 3300046543 Bacteria 8080
223 Ga0495667_0001470 3300046559 Bacteria 15509
224 Ga0495667_0105673 3300046559 Bacteria 1820
225 Ga0495635_0012202 3300046663 Bacteria 6023
226 Ga0495657_0000539 3300046675 Bacteria 34985
227 Ga0495623_0007422 3300046679 Bacteria 7119
228 Ga0495613_0046403 3300046689 Bacteria 3213
229 Ga0495613_0152969 3300046689 Bacteria 1644
230 Ga0495613_0172898 3300046689 Bacteria 1532
231 Ga0495600_0036560 3300046809 Bacteria 3192
232 Ga0495674_0102107 3300047319 Bacteria 2439
233 Ga0495674_0236451 3300047319 Bacteria 1507
234 Ga0495675_0045113 3300047444 Bacteria 2807
235 Ga0495684_0018234 3300047471 Bacteria 5409
236 Ga0495684_0034333 3300047471 Bacteria 3891
237 Ga0495684_0039836 3300047471 Bacteria 3602
238 Ga0495684_0127256 3300047471 Bacteria 1916
239 Ga0495684_0179250 3300047471 Bacteria 1571
240 Ga0495602_0010925 3300048088 Bacteria 9410
241 Ga0495602_0052926 3300048088 Bacteria 3600
242 Ga0496103_0045790 3300048906 Bacteria 2700
243 Ga0496104_0149050 3300048907 Bacteria 2246
244 Ga0496109_0098094 3300048912 Bacteria 2717
245 Ga0496110_0024068 3300048913 Bacteria 5189
246 Ga0496112_0007346 3300048915 Bacteria 9775
247 Ga0496115_0035412 3300048918 Bacteria 3949
248 Ga0501032_0000917 3300049569 Bacteria 23851
249 Ga0501033_0012579 3300049570 Bacteria 6457
250 Ga0501034_0044631 3300049571 Bacteria 4481
251 Ga0501036_0008370 3300049572 Bacteria 8476
252 Ga0501036_0086266 3300049572 Bacteria 2654
253 Ga0501037_0002754 3300049573 Bacteria 12712
254 Ga0501038_0003257 3300049574 Bacteria 15143
255 Ga0501039_0003202 3300049575 Bacteria 12246
256 Ga0501042_0037168 3300049578 Bacteria 3456
257 Ga0501043_0004674 3300049579 Bacteria 11099
258 Ga0501046_0003434 3300049580 Bacteria 14534
259 Ga0501047_0060149 3300049581 Bacteria 3666
260 Ga0501048_0042251 3300049582 Bacteria 3264
261 Ga0501067_0002945 3300049583 Bacteria 9392
262 Ga0501068_0002816 3300049584 Bacteria 9242
263 Ga0501069_0045697 3300049585 Bacteria 2426
264 Ga0501070_0045110 3300049586 Bacteria 3666
265 Ga0501072_0004059 3300049588 Bacteria 11083
266 Ga0501073_0015476 3300049589 Bacteria 5534
267 Ga0501074_0030723 3300049590 Bacteria 3892
268 Ga0501077_0006125 3300049593 Bacteria 7347
269 Ga0501079_0027615 3300049741 Bacteria 4353
270 Ga0501080_0003070 3300049742 Bacteria 14743
271 Ga0501083_0007847 3300049744 Bacteria 7560
272 Ga0501035_0052389 3300049822 Bacteria 3651
273 Ga0501044_0126938 3300049823 Bacteria 2547
274 nmdc:mga00v17_21548_c1 3300050491 Bacteria 3706
275 nmdc:mga00v17_42776_c1 3300050491 Bacteria 2726
276 nmdc:mga0k408_145697_c1 3300050493 Bacteria 1410
277 nmdc:mga06z11_11520_c1 3300050494 Bacteria 3817
278 nmdc:mga05p37_123600_c1 3300050507 Bacteria 3179
279 nmdc:mga05p37_1315_c1 3300050507 Bacteria 28920
280 nmdc:mga05p37_3624_c1 3300050507 Bacteria 18056
281 nmdc:mga0qj67_12374_c1 3300050509 Bacteria 6428
282 nmdc:mga0qj67_143725_c1 3300050509 Bacteria 1934
283 nmdc:mga0qj67_65160_c1 3300050509 Bacteria 2900
284 nmdc:mga06r32_2673_c1 3300050510 Bacteria 15944
285 nmdc:mga06r32_6523_c1 3300050510 Bacteria 10484
286 nmdc:mga06r32_7272_c1 3300050510 Bacteria 9973
287 nmdc:mga08y16_2471_c1 3300050511 Bacteria 18972
288 nmdc:mga08y16_3092_c1 3300050511 Bacteria 17219
289 nmdc:mga0n895_47059_c1 3300050512 Bacteria 4216
290 nmdc:mga0n895_76285_c1 3300050512 Bacteria 3333
291 nmdc:mga08x19_484_c1 3300050514 Bacteria 26517
292 nmdc:mga0a205_17519_c1 3300050515 Bacteria 6718
293 Ga0501084_0001477 3300054114 Bacteria 18673
294 Ga0501082_0000283 3300060353 Bacteria 44708
295 Ga0501082_0050234 3300060353 Bacteria 3597
296 Ga0501082_0149740 3300060353 Bacteria 2026
297 Ga0207676_10024115
298 Ga0065704_10010002
299 Ga0065715_10091042
300 Ga0065715_10095561
301 Ga0065707_10088905
302 Ga0070683_100000001
303 Ga0070683_100009841
304 Ga0070683_100018713
305 Ga0070683_100034410
306 Ga0070683_100075284
307 Ga0070690_100006944
308 Ga0070670_100001826
309 Ga0070670_100167379
310 Ga0070666_10002968
311 Ga0070680_100058297
312 Ga0070661_100013644
313 Ga0070669_100000399
314 Ga0070675_100011445
315 Ga0070671_100013404
316 Ga0070688_100007123
317 Ga0070667_100001651
318 Ga0070713_100091385
319 Ga0070713_100272411
320 Ga0070711_100115344
321 Ga0070681_10008550
322 Ga0070681_10012546
323 Ga0070681_10063825
324 Ga0068867_100254526
325 Ga0070706_100253274
326 Ga0070707_100005659
327 Ga0070699_100020525
328 Ga0070679_100098220
329 Ga0070684_100000279
330 Ga0068853_100041164
331 Ga0068853_100118549
332 Ga0070672_100001946
333 Ga0070696_100003991
334 Ga0070665_100365236
335 Ga0068855_100009965
336 Ga0068855_100238220
337 Ga0070664_100006627
338 Ga0068857_100031358
339 Ga0068857_100220748
340 Ga0068856_100012748
341 Ga0068856_100084449
342 Ga0068852_100008980
343 Ga0068864_100042582
344 Ga0068864_100192623
345 Ga0068870_10006539
346 Ga0068863_100051225
347 Ga0068862_100015338
348 Ga0070717_10080206
349 Ga0075368_10007156
350 Ga0075364_10000629
351 Ga0075364_10008770
352 Ga0075367_10002852
353 Ga0097621_100028935
354 Ga0097621_100086331
355 Ga0075370_10002500
356 Ga0068871_100173353
357 Ga0075428_100002032
358 Ga0075428_100010874
359 Ga0075428_100019744
360 Ga0075430_100001620
361 Ga0075430_100006461
362 Ga0075430_100217144
363 Ga0075431_100004668
364 Ga0075431_100010840
365 Ga0075431_100030992
366 Ga0075429_100001052
367 Ga0075429_100003907
368 Ga0105240_10001669
369 Ga0105240_10005110
370 Ga0105240_10037781
371 Ga0105240_10061646
372 Ga0111539_10000640
373 Ga0111539_10007864
374 Ga0111539_10035921
375 Ga0111539_10216086
376 Ga0105245_10011221
377 Ga0105245_10036264
378 Ga0114129_10000924
379 Ga0114129_10015592
380 Ga0114129_10361581
381 Ga0114129_10433435
382 Ga0105241_10024415
383 Ga0105248_10002121
384 Ga0105248_10003076
385 Ga0105248_10186447
386 Ga0105237_10010835
387 Ga0105237_10013468
388 Ga0105237_10050176
389 Ga0105237_10129628
390 Ga0105238_10004574
391 Ga0105238_10124744
392 Ga0105238_10173037
393 Ga0105249_10003819
394 Ga0105239_10016063
395 Ga0105239_10034719
396 Ga0105239_10178966
397 Ga0105246_10119992
398 Ga0157370_10003281
399 Ga0157369_10015552
400 Ga0157369_10020844
401 Ga0157369_10034684
402 Ga0157369_10037553
403 Ga0163162_10024104
404 Ga0163162_10380442
405 Ga0157375_10012854
406 Ga0163163_10000775
407 Ga0163163_10033780
408 Ga0157377_10032487
409 Ga0157376_10018484
410 Ga0157376_10179383
411 Ga0213876_10053583
412 Ga0207643_10019711
413 Ga0207654_10005824
414 Ga0207707_10003242
415 Ga0207707_10006701
416 Ga0207707_10015500
417 Ga0207695_10002549
418 Ga0207695_10011055
419 Ga0207695_10063968
420 Ga0207671_10008124
421 Ga0207657_10046595
422 Ga0207652_10012800
423 Ga0207652_10120334
424 Ga0207646_10004452
425 Ga0207681_10008439
426 Ga0207681_10183407
427 Ga0207694_10015190
428 Ga0207694_10017257
429 Ga0207650_10007184
430 Ga0207659_10176445
431 Ga0207687_10025130
432 Ga0207644_10021528
433 Ga0207706_10197159
434 Ga0207709_10052120
435 Ga0207691_10097034
436 Ga0207691_10112621
437 Ga0207711_10200425
438 Ga0207661_10000005
439 Ga0207661_10264024
440 Ga0207679_10039652
441 Ga0207679_10073796
442 Ga0207667_10019050
443 Ga0207667_10031528
444 Ga0207658_10002479
445 Ga0207703_10087861
446 Ga0207639_10041063
447 Ga0207702_10050859
448 Ga0207641_10216873
449 Ga0207674_10000598
450 Ga0207674_10142899
451 Ga0207683_10026215
452 Ga0207698_10110176
453 Ga0207428_10002645
454 Ga0268265_10007845
455 Ga0265320_10001099
456 Ga0265325_10002248
457 Ga0265339_10023770
458 Ga0265331_10006083
459 Ga0265331_10036334
460 Ga0265331_10057664
461 Ga0265316_10003112
462 Ga0265316_10014281
463 Ga0265316_10023019
464 Ga0265316_10024931
465 Ga0265316_10028932
466 Ga0265316_10060966
467 Ga0265316_10098252
468 Ga0265316_10132466
469 Ga0265316_10134222
470 Ga0307408_100011692
471 Ga0265313_10006825
472 Ga0265314_10000541
473 Ga0265342_10042550
474 Ga0265342_10086249
475 Ga0307412_10100787
476 Ga0307416_100096548
477 Ga0373934_0006545
478 Ga0373934_0054266
479 Ga0373954_0009466
480 Ga0373954_0010365
481 Ga0373960_0007248
482 Ga0373955_0001642
483 Ga0373955_0042916
484 Ga0373955_0086048
485 Ga0373924_0052656
486 Ga0373931_0022849
487 Ga0373935_0104297
488 Ga0373927_0004759
489 Ga0373933_0010645
490 Ga0373947_0015128
491 Ga0373937_0004799
492 Ga0373937_0013184
493 Ga0373937_0022573
494 Ga0373937_0184982
495 Ga0373925_0011554
496 Ga0373925_0022088
497 Ga0436364_1081453
498 Ga0436365_0528631
499 Ga0436365_1329105
500 Ga0439464_0002164
501 Ga0439460_0015860
502 Ga0451576_0057381
503 Ga0495592_0022556
504 Ga0495592_0031975
505 Ga0495629_0023336
506 Ga0495629_0108494
507 Ga0495651_0015110
508 Ga0495580_0007867
509 Ga0495580_0007923
510 Ga0495580_0011890
511 Ga0495664_0055880
512 Ga0495608_0006123
513 Ga0495628_0007109
514 Ga0495666_0062904
515 Ga0495652_0050718
516 Ga0495665_0042825
517 Ga0495587_0010311
518 Ga0495645_0006573
519 Ga0495667_0001470
520 Ga0495667_0105673
521 Ga0495635_0012202
522 Ga0495657_0000539
523 Ga0495623_0007422
524 Ga0495613_0046403
525 Ga0495613_0152969
526 Ga0495613_0172898
527 Ga0495600_0036560
528 Ga0495674_0102107
529 Ga0495674_0236451
530 Ga0495675_0045113
531 Ga0495684_0018234
532 Ga0495684_0034333
533 Ga0495684_0039836
534 Ga0495684_0127256
535 Ga0495684_0179250
536 Ga0495602_0010925
537 Ga0495602_0052926
538 Ga0496103_0045790
539 Ga0496104_0149050
540 Ga0496109_0098094
541 Ga0496110_0024068
542 Ga0496112_0007346
543 Ga0496115_0035412
544 Ga0501032_0000917
545 Ga0501033_0012579
546 Ga0501034_0044631
547 Ga0501036_0008370
548 Ga0501036_0086266
549 Ga0501037_0002754
550 Ga0501038_0003257
551 Ga0501039_0003202
552 Ga0501042_0037168
553 Ga0501043_0004674
554 Ga0501046_0003434
555 Ga0501047_0060149
556 Ga0501048_0042251
557 Ga0501067_0002945
558 Ga0501068_0002816
559 Ga0501069_0045697
560 Ga0501070_0045110
561 Ga0501072_0004059
562 Ga0501073_0015476
563 Ga0501074_0030723
564 Ga0501077_0006125
565 Ga0501079_0027615
566 Ga0501080_0003070
567 Ga0501083_0007847
568 Ga0501035_0052389
569 Ga0501044_0126938
570 nmdc:mga00v17_21548_c1
571 nmdc:mga00v17_42776_c1
572 nmdc:mga0k408_145697_c1
573 nmdc:mga06z11_11520_c1
574 nmdc:mga05p37_123600_c1
575 nmdc:mga05p37_1315_c1
576 nmdc:mga05p37_3624_c1
577 nmdc:mga0qj67_12374_c1
578 nmdc:mga0qj67_143725_c1
579 nmdc:mga0qj67_65160_c1
580 nmdc:mga06r32_2673_c1
581 nmdc:mga06r32_6523_c1
582 nmdc:mga06r32_7272_c1
583 nmdc:mga08y16_2471_c1
584 nmdc:mga08y16_3092_c1
585 nmdc:mga0n895_47059_c1
586 nmdc:mga0n895_76285_c1
587 nmdc:mga08x19_484_c1
588 nmdc:mga0a205_17519_c1
589 Ga0501084_0001477
590 Ga0501082_0000283
591 Ga0501082_0050234
592 Ga0501082_0149740

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

197

364

0.99

PF00072

Response_reg

Response regulator receiver domain

62

172

0.97

PF02954

HTH_8

Bacterial regulatory protein, Fis family

457

498

0.95

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

198

368

0.91

PF07728

AAA_5

AAA domain (dynein-related subfamily)

220

358

0.8

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

221

358

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fth-assembly1.cif.gz_B crystal structure of ntrc4 dna-binding domain bound to double-stranded dna 0.9656 399 446
4fth-assembly1.cif.gz_A crystal structure of ntrc4 dna-binding domain bound to double-stranded dna 0.9434 399 448
1ety-assembly1.cif.gz_A the crystal structure of e. coli wild-type fis 0.9347 399 446
1etv-assembly1.cif.gz_A the crystal structure of e. coli fis mutant g72a 0.9306 399 446
1etw-assembly1.cif.gz_A the crystal structure of e. coli fis mutant g72d 0.9304 399 446
ID Description Score Start End Superfamily
3e7lD00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9679 399 446 1.10.10.60
4fthB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9656 399 446 1.10.10.60
3e7lC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9544 399 446 1.10.10.60
af_P0AFB8_313_383_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9525 316 385 1.10.8.60
4fthA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9434 399 448 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A538RIP3-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9592 262 382 GO:0005524
GO:0006355
AF-T1C2E2-F1-model_v4 RNA polymerase sigma factor 54, interaction domain protein 0.9383 307 383 GO:0005524
GO:0006355
AF-A0A497G6D6-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9213 250 383 GO:0005524
GO:0006355
AF-A0A538SFX2-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.8767 266 385 GO:0005524
GO:0006355
AF-A0A257VW85-F1-model_v4 Fis family transcriptional regulator 0.8759 142 356 GO:0005524
GO:0006355
GO:0016887

Map