F393209

General Info

Members Datasets Scaffolds Average Seq Length
296 201 592 706

Family's Representative Sequence

Representative Sequence 3300021441|Ga0213871_10003397|Ga0213871_100033972
Length 773
Sequence MTRFHNYGMCLRSASSPRRRTGRRNAISVFCEVSIRHSRKLPLARISGMSPIKVWHGKPYPLGATWIGNGVNFALYSEHATSVDLCLFDSIESSQEEVRIRVTEHSDEVWHIFLPDIMPGQLYGYRVEGPYDPENGARFNPSKLLLDPYAKSISGTIDWADEMFGYRVGGPNGDLERDYRDNAFGVPKSVVIDRAPERPLHETVVYEVHVKGFSKLCPHIPEKIRGTYAGLGSSWAIDYFKDLGITAVELLPVHQFVNDKILADRSLRNYWGYNSIGYFAPDSRYSSSGVTGGQVQEFKTMVKNLHSAGIEVILDVVYNHTAEGNHMGPTLCFKGIENLNYYRLVPDNLRYYMDYTGTGNTLNVMQARSLQLIMDSLRYWVTEMHVDGFRFDLAATLARELHAVSKLSAFFDIIHQDPVLSQVKLIAEPWDVGEGGYQVGNFPVLWAEWNGKYRDSVRSYWKGDEGQVGEIAYRLTGSPDLYQWNGKRPQASINFVTSHDGYTLADLVSYNEKHNGANGEKSWNCGAEGPTQDPEINALRRRQQRNFLCTLFLSQGVPMLCGGDECGRTQQGNNNAYCQDNEISWTKWAWDEHAERLNHFTSRLIKSRHEHPIFRRPKFFQGRKIRGSEIKDIMWFNPGGTEMEDEEWNTTFVRTLGVMLSGDTIDVRDFYGRPIQDDTFLMLLNAHHETVNFVLPGQEEVRWELIIDTCLEEGFLETPKVFASSEEYEMGDRSFSLLRLRVGEQSHARAASWKKREQKLGKSSDEKKAAVSR

Samples

Sample ID Description Type Environment
1 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
30 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
39 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
40 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
41 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
42 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
43 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
49 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
52 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
57 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
58 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
59 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
60 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
61 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
62 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
63 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
65 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
66 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
72 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
76 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
77 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
78 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
79 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
85 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
86 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
87 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
89 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
91 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
93 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
133 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
136 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
139 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
140 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
141 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
142 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
143 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
144 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
145 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
146 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
147 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
148 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
149 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
150 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
151 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
152 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
153 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
154 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
155 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
156 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
157 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
158 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
159 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
160 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
161 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
162 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
163 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
164 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
165 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
166 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
167 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
168 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
169 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
172 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
176 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
177 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
182 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
183 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
184 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
185 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
186 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
187 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
188 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
189 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
190 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
191 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
194 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
195 2643221733 Bosea sp. Root381 Isolate Unclassified
196 2643221734 Bosea sp. Root670 Isolate Unclassified
197 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
198 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
199 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
200 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
201 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 96.96
Metatranscriptomes 0.68
Isolates 2.36

Biome Distribution

Category Percentage (%)
Aerial Root 0.34
Bulb 0
Endosphere 6.76
Nodule 0.68
Rhizoplane 3.38
Rhizosphere 84.46
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213871_10003397 3300021441 Bacteria 3063
2 CNXas_1000174 3300000545 Bacteria 10398
3 JGI25158J39367_1000008 3300002739 Bacteria 54279
4 JGI25151J46595_10000063 3300003187 Bacteria 146046
5 JGI25153J46596_10000668 3300003215 Bacteria 21012
6 rootH2_10005124 3300003320 Bacteria 13563
7 rootL2_10169537 3300003322 Bacteria 5608
8 JGI25161J50226_1000045 3300003374 Bacteria 116781
9 Ga0055526_1000056 3300003771 Bacteria 110574
10 JGI25405J52794_10001531 3300003911 Bacteria 3827
11 Ga0055543_1000076 3300004625 Bacteria 86664
12 Ga0065165_1006902 3300005262 Bacteria 5769
13 Ga0070658_10002419 3300005327 Bacteria 15623
14 Ga0070683_100001363 3300005329 Bacteria 18693
15 Ga0070683_100031331 3300005329 Bacteria 4834
16 Ga0070670_100004288 3300005331 Bacteria 11936
17 Ga0070670_100005368 3300005331 Bacteria 10819
18 Ga0070670_100018290 3300005331 Bacteria 6012
19 Ga0070680_100017934 3300005336 Bacteria 5587
20 Ga0068868_100032985 3300005338 Bacteria 3988
21 Ga0070689_100064486 3300005340 Bacteria 2851
22 Ga0070668_100009522 3300005347 Bacteria 7206
23 Ga0070668_100038154 3300005347 Bacteria 3671
24 Ga0070669_100032778 3300005353 Bacteria 3753
25 Ga0070675_100011738 3300005354 Bacteria 6863
26 Ga0070675_100017570 3300005354 Bacteria 5685
27 Ga0070671_100016910 3300005355 Bacteria 5899
28 Ga0070673_100002587 3300005364 Bacteria 11050
29 Ga0070673_100003563 3300005364 Bacteria 9719
30 Ga0070673_100087557 3300005364 Bacteria 2539
31 Ga0070688_100012124 3300005365 Bacteria 4819
32 Ga0070688_100022572 3300005365 Bacteria 3691
33 Ga0070667_100037043 3300005367 Bacteria 4089
34 Ga0070709_10000345 3300005434 Bacteria 28953
35 Ga0070709_10030072 3300005434 Bacteria 3256
36 Ga0070714_100002452 3300005435 Bacteria 13694
37 Ga0070713_100000074 3300005436 Bacteria 62914
38 Ga0070713_100026270 3300005436 Bacteria 4569
39 Ga0070713_100041726 3300005436 Bacteria 3740
40 Ga0070713_100054101 3300005436 Bacteria 3329
41 Ga0070705_100034142 3300005440 Bacteria 2842
42 Ga0070708_100002171 3300005445 Bacteria 15153
43 Ga0070708_100059222 3300005445 Bacteria 3414
44 Ga0070708_100060940 3300005445 Bacteria 3369
45 Ga0070663_100027462 3300005455 Bacteria 3866
46 Ga0070678_100003540 3300005456 Bacteria 8713
47 Ga0070662_100001453 3300005457 Bacteria 14609
48 Ga0070681_10005590 3300005458 Bacteria 12143
49 Ga0070706_100000292 3300005467 Bacteria 60823
50 Ga0070706_100000577 3300005467 Bacteria 42644
51 Ga0070707_100001900 3300005468 Bacteria 20031
52 Ga0070707_100018424 3300005468 Bacteria 6567
53 Ga0070698_100000749 3300005471 Bacteria 35011
54 Ga0070698_100026354 3300005471 Bacteria 6051
55 Ga0070698_100101372 3300005471 Bacteria 2850
56 Ga0070699_100012956 3300005518 Bacteria 7186
57 Ga0070699_100015053 3300005518 Bacteria 6647
58 Ga0070679_100001877 3300005530 Bacteria 18910
59 Ga0070679_100004858 3300005530 Bacteria 12403
60 Ga0070684_100032224 3300005535 Bacteria 4466
61 Ga0070684_100045007 3300005535 Bacteria 3820
62 Ga0070697_100000664 3300005536 Bacteria 25893
63 Ga0070697_100032981 3300005536 Bacteria 4169
64 Ga0070697_100041974 3300005536 Bacteria 3703
65 Ga0070697_100051047 3300005536 Bacteria 3360
66 Ga0070697_100052320 3300005536 Bacteria 3318
67 Ga0070697_100067752 3300005536 Bacteria 2920
68 Ga0070672_100001779 3300005543 Bacteria 13476
69 Ga0070696_100023786 3300005546 Bacteria 4164
70 Ga0070665_100068626 3300005548 Bacteria 3555
71 Ga0070665_100090712 3300005548 Bacteria 3062
72 Ga0068855_100003066 3300005563 Bacteria 20436
73 Ga0070664_100000433 3300005564 Bacteria 31389
74 Ga0068857_100013887 3300005577 Bacteria 7012
75 Ga0068854_100014777 3300005578 Bacteria 5155
76 Ga0068854_100031498 3300005578 Bacteria 3686
77 Ga0068856_100000637 3300005614 Bacteria 38136
78 Ga0068856_100001263 3300005614 Bacteria 26633
79 Ga0068856_100030844 3300005614 Bacteria 5242
80 Ga0068859_100000870 3300005617 Bacteria 30819
81 Ga0068864_100027687 3300005618 Bacteria 4789
82 Ga0068866_10000956 3300005718 Bacteria 12698
83 Ga0068863_100039153 3300005841 Bacteria 4511
84 Ga0068858_100091000 3300005842 Bacteria 2840
85 Ga0068860_100000921 3300005843 Bacteria 32659
86 Ga0081455_10000582 3300005937 Bacteria 47687
87 Ga0081540_1000340 3300005983 Bacteria 47909
88 Ga0081540_1002865 3300005983 Bacteria 13951
89 Ga0081540_1004443 3300005983 Bacteria 10695
90 Ga0081539_10006400 3300005985 Bacteria 11324
91 Ga0070717_10014347 3300006028 Bacteria 6095
92 Ga0070717_10035466 3300006028 Bacteria 4038
93 Ga0070715_10007620 3300006163 Bacteria 3735
94 Ga0070716_100008043 3300006173 Bacteria 5222
95 Ga0070712_100000555 3300006175 Bacteria 21657
96 Ga0070712_100002521 3300006175 Bacteria 11302
97 Ga0070712_100004327 3300006175 Bacteria 8748
98 Ga0097621_100000323 3300006237 Bacteria 32350
99 Ga0097621_100036087 3300006237 Bacteria 3953
100 Ga0068871_100000079 3300006358 Bacteria 54079
101 Ga0068871_100009428 3300006358 Bacteria 7073
102 Ga0068871_100020836 3300006358 Bacteria 5029
103 Ga0075434_100000013 3300006871 Bacteria 83380
104 Ga0075436_100002992 3300006914 Bacteria 11573
105 Ga0075436_100026044 3300006914 Bacteria 4026
106 Ga0075436_100055050 3300006914 Bacteria 2746
107 Ga0097620_100000870 3300006931 Bacteria 30819
108 Ga0075435_100000852 3300007076 Bacteria 19080
109 Ga0105240_10000183 3300009093 Bacteria 127268
110 Ga0105240_10000324 3300009093 Bacteria 90243
111 Ga0105240_10009620 3300009093 Bacteria 13671
112 Ga0105240_10144696 3300009093 Bacteria 2838
113 Ga0111539_10083153 3300009094 Bacteria 3765
114 Ga0105245_10006572 3300009098 Bacteria 10204
115 Ga0105241_10007814 3300009174 Bacteria 7864
116 Ga0105241_10038462 3300009174 Bacteria 3606
117 Ga0105237_10108587 3300009545 Bacteria 2766
118 Ga0105238_10000596 3300009551 Bacteria 37909
119 Ga0105238_10001355 3300009551 Bacteria 24579
120 Ga0105239_10010146 3300010375 Bacteria 10555
121 Ga0157370_10000298 3300013104 Bacteria 62940
122 Ga0157369_10007117 3300013105 Bacteria 12901
123 Ga0157369_10038236 3300013105 Bacteria 5247
124 Ga0157374_10000131 3300013296 Bacteria 68526
125 Ga0157374_10009004 3300013296 Bacteria 8562
126 Ga0157378_10000076 3300013297 Bacteria 89698
127 Ga0157378_10000544 3300013297 Bacteria 35798
128 Ga0163162_10019889 3300013306 Bacteria 6594
129 Ga0163162_10073163 3300013306 Bacteria 3483
130 Ga0157372_10001605 3300013307 Bacteria 24547
131 Ga0157372_10006321 3300013307 Bacteria 12604
132 Ga0157372_10009796 3300013307 Bacteria 10191
133 Ga0157372_10024824 3300013307 Bacteria 6514
134 Ga0157372_10075165 3300013307 Bacteria 3811
135 Ga0157375_10056230 3300013308 Bacteria 3883
136 Ga0157376_10021837 3300014969 Bacteria 4977
137 Ga0213874_10011164 3300021377 Bacteria 2268
138 Ga0209436_100001 3300025208 Bacteria 304543
139 Ga0209436_100003 3300025208 Bacteria 220530
140 Ga0209129_1000491 3300025258 Bacteria 28765
141 Ga0209673_1000397 3300025273 Bacteria 77638
142 Ga0209673_1000489 3300025273 Bacteria 65739
143 Ga0209130_1000049 3300025284 Bacteria 226841
144 Ga0209564_1000255 3300025295 Bacteria 113017
145 Ga0209758_1000175 3300025297 Bacteria 145649
146 Ga0209256_1000379 3300025299 Bacteria 71301
147 Ga0207426_1000043 3300025302 Bacteria 432827
148 Ga0209051_1002246 3300025303 Bacteria 14195
149 Ga0207697_10000407 3300025315 Bacteria 24291
150 Ga0207697_10000674 3300025315 Bacteria 19410
151 Ga0207697_10001402 3300025315 Bacteria 13187
152 Ga0207682_10015866 3300025893 Bacteria 2936
153 Ga0207685_10004441 3300025905 Bacteria 3566
154 Ga0207699_10000520 3300025906 Bacteria 19047
155 Ga0207645_10001717 3300025907 Bacteria 17779
156 Ga0207645_10005040 3300025907 Bacteria 9674
157 Ga0207645_10008841 3300025907 Bacteria 7000
158 Ga0207705_10001720 3300025909 Bacteria 17360
159 Ga0207684_10000347 3300025910 Bacteria 64001
160 Ga0207684_10004644 3300025910 Bacteria 12898
161 Ga0207684_10017406 3300025910 Bacteria 6166
162 Ga0207684_10023211 3300025910 Bacteria 5298
163 Ga0207707_10000470 3300025912 Bacteria 41691
164 Ga0207707_10054748 3300025912 Bacteria 3473
165 Ga0207695_10000072 3300025913 Bacteria 312795
166 Ga0207695_10000279 3300025913 Bacteria 127268
167 Ga0207695_10001758 3300025913 Bacteria 34365
168 Ga0207671_10041813 3300025914 Bacteria 3392
169 Ga0207693_10000178 3300025915 Bacteria 57563
170 Ga0207693_10000519 3300025915 Bacteria 34790
171 Ga0207693_10006348 3300025915 Bacteria 9800
172 Ga0207693_10031144 3300025915 Bacteria 4214
173 Ga0207693_10069247 3300025915 Bacteria 2761
174 Ga0207663_10015123 3300025916 Bacteria 4248
175 Ga0207660_10001633 3300025917 Bacteria 15031
176 Ga0207657_10017925 3300025919 Bacteria 6775
177 Ga0207652_10000795 3300025921 Bacteria 30149
178 Ga0207646_10000562 3300025922 Bacteria 48884
179 Ga0207646_10002437 3300025922 Bacteria 21940
180 Ga0207646_10004664 3300025922 Bacteria 14784
181 Ga0207646_10012039 3300025922 Bacteria 8332
182 Ga0207646_10070546 3300025922 Bacteria 3120
183 Ga0207681_10013543 3300025923 Bacteria 5050
184 Ga0207694_10000458 3300025924 Bacteria 37929
185 Ga0207694_10021301 3300025924 Bacteria 4912
186 Ga0207650_10006248 3300025925 Bacteria 8117
187 Ga0207700_10004288 3300025928 Bacteria 8387
188 Ga0207700_10038228 3300025928 Bacteria 3482
189 Ga0207706_10003634 3300025933 Bacteria 14728
190 Ga0207706_10094734 3300025933 Bacteria 2626
191 Ga0207704_10004454 3300025938 Bacteria 6404
192 Ga0207704_10006547 3300025938 Bacteria 5441
193 Ga0207665_10012942 3300025939 Bacteria 5488
194 Ga0207691_10001516 3300025940 Bacteria 23103
195 Ga0207691_10003910 3300025940 Bacteria 14472
196 Ga0207691_10009325 3300025940 Bacteria 9418
197 Ga0207689_10025314 3300025942 Bacteria 4972
198 Ga0207679_10006951 3300025945 Bacteria 7170
199 Ga0207667_10007866 3300025949 Bacteria 12734
200 Ga0207667_10034728 3300025949 Bacteria 5412
201 Ga0207640_10023091 3300025981 Bacteria 3735
202 Ga0207640_10047904 3300025981 Bacteria 2760
203 Ga0207658_10013881 3300025986 Bacteria 5512
204 Ga0207658_10064316 3300025986 Bacteria 2751
205 Ga0207677_10020890 3300026023 Bacteria 3989
206 Ga0207678_10013672 3300026067 Bacteria 7129
207 Ga0207708_10009411 3300026075 Bacteria 7234
208 Ga0207702_10000570 3300026078 Bacteria 40941
209 Ga0207702_10002670 3300026078 Bacteria 16750
210 Ga0207702_10006839 3300026078 Bacteria 9779
211 Ga0207641_10029119 3300026088 Bacteria 4566
212 Ga0207648_10017142 3300026089 Bacteria 6600
213 Ga0207676_10006427 3300026095 Bacteria 8303
214 Ga0207674_10000125 3300026116 Bacteria 89047
215 Ga0207683_10045007 3300026121 Bacteria 3859
216 Ga0265354_1000246 3300028016 Bacteria 9825
217 Ga0268266_10056820 3300028379 Bacteria 3366
218 Ga0268264_10000401 3300028381 Bacteria 61879
219 Ga0265338_10000529 3300028800 Bacteria 67074
220 Ga0265338_10027058 3300028800 Bacteria 5764
221 Ga0265770_1000063 3300030878 Bacteria 11619
222 Ga0265760_10000087 3300031090 Bacteria 23839
223 Ga0265314_10017722 3300031711 Bacteria 5580
224 Ga0373943_0011478 3300035170 Bacteria 3986
225 Ga0373935_0009191 3300035692 Bacteria 5916
226 Ga0373935_0023597 3300035692 Bacteria 3782
227 Ga0373927_0019927 3300035695 Bacteria 4399
228 Ga0373947_0006925 3300035725 Bacteria 6570
229 Ga0373925_0000874 3300037068 Bacteria 27529
230 Ga0395900_0003517 3300037418 Bacteria 16914
231 Ga0395905_0055280 3300037471 Bacteria 3715
232 Ga0436364_1415650 3300037853 Bacteria 3359
233 Ga0395901_0008695 3300038443 Bacteria 10261
234 Ga0436365_0432132 3300039437 Bacteria 8624
235 Ga0436360_1144320 3300039438 Bacteria 4416
236 Ga0436363_0552713 3300039450 Bacteria 6756
237 Ga0436363_1349550 3300039450 Bacteria 7639
238 Ga0451577_0070584 3300042876 Bacteria 3115
239 Ga0466959_0076641 3300045049 Bacteria 2414
240 Ga0451576_0000209 3300045051 Bacteria 147227
241 Ga0451576_0082000 3300045051 Bacteria 3354
242 Ga0495641_0007178 3300046461 Bacteria 7030
243 Ga0495580_0000687 3300046472 Bacteria 28835
244 Ga0495580_0044733 3300046472 Bacteria 3148
245 Ga0495664_0002233 3300046477 Bacteria 10366
246 Ga0495630_0000638 3300046517 Bacteria 25397
247 Ga0495630_0014661 3300046517 Bacteria 5714
248 Ga0495666_0001888 3300046526 Bacteria 10341
249 Ga0495665_0003112 3300046531 Bacteria 8979
250 Ga0495623_0066538 3300046679 Bacteria 2251
251 Ga0495647_0000055 3300046681 Bacteria 28891
252 Ga0495669_0014297 3300046684 Bacteria 3393
253 Ga0495624_0007920 3300046690 Bacteria 7451
254 Ga0495581_0001152 3300047315 Bacteria 14467
255 Ga0495674_0067556 3300047319 Bacteria 3097
256 Ga0495676_0037745 3300047321 Bacteria 4017
257 Ga0495684_0039495 3300047471 Bacteria 3618
258 Ga0495593_0000267 3300047673 Bacteria 28295
259 Ga0495602_0105068 3300048088 Bacteria 2309
260 Ga0496106_0013425 3300048909 Bacteria 6046
261 Ga0496107_0014146 3300048910 Bacteria 5586
262 Ga0496109_0064553 3300048912 Bacteria 3351
263 Ga0496112_0036257 3300048915 Bacteria 4810
264 Ga0496112_0061858 3300048915 Bacteria 3692
265 Ga0496113_0030565 3300048916 Bacteria 3900
266 Ga0496113_0080715 3300048916 Bacteria 2492
267 Ga0496114_0035212 3300048917 Bacteria 4134
268 Ga0496115_0015622 3300048918 Bacteria 5764
269 Ga0496115_0040852 3300048918 Bacteria 3689
270 Ga0496121_0027785 3300048924 Bacteria 5285
271 Ga0496124_0085210 3300048927 Bacteria 2590
272 Ga0501033_0051264 3300049570 Bacteria 3059
273 Ga0501034_0019775 3300049571 Bacteria 6882
274 Ga0501076_0021195 3300049592 Bacteria 4983
275 Ga0501077_0003057 3300049593 Bacteria 10046
276 Ga0501079_0029363 3300049741 Bacteria 4222
277 Ga0501081_0005305 3300049743 Bacteria 8311
278 Ga0501044_0064215 3300049823 Bacteria 3749
279 nmdc:mga0n895_65126_c1 3300050512 Bacteria 3607
280 nmdc:mga0n895_77261_c1 3300050512 Bacteria 3311
281 nmdc:mga0rr50_1113_c1 3300050513 Bacteria 14599
282 nmdc:mga0a205_12899_c1 3300050515 Bacteria 7752
283 Ga0495612_0008237 3300053078 Bacteria 4234
284 Ga0500608_018333 3300053122 Bacteria 3192
285 Ga0500637_0001785 3300053178 Bacteria 9293
286 Ga0501084_0009117 3300054114 Bacteria 8211
287 Ga0501084_0031420 3300054114 Bacteria 4440
288 Ga0590071_000899 3300059421 Bacteria 8248
289 Ga0590074_001192 3300059423 Bacteria 4102
290 2644732824 2643221733 Bacteria 5690728
291 2644734507 2643221734 Bacteria 5365412
292 2841912987 2841911363 Bacteria 6173697
293 2841918734 2841917233 Bacteria 6173500
294 2919167680 2919166419 Bacteria 4952238
295 2978974139 2978969890 Bacteria 5400756
296 2984589466 2984587000 Bacteria 5263363
297 Ga0213871_10003397
298 CNXas_1000174
299 JGI25158J39367_1000008
300 JGI25151J46595_10000063
301 JGI25153J46596_10000668
302 rootH2_10005124
303 rootL2_10169537
304 JGI25161J50226_1000045
305 Ga0055526_1000056
306 JGI25405J52794_10001531
307 Ga0055543_1000076
308 Ga0065165_1006902
309 Ga0070658_10002419
310 Ga0070683_100001363
311 Ga0070683_100031331
312 Ga0070670_100004288
313 Ga0070670_100005368
314 Ga0070670_100018290
315 Ga0070680_100017934
316 Ga0068868_100032985
317 Ga0070689_100064486
318 Ga0070668_100009522
319 Ga0070668_100038154
320 Ga0070669_100032778
321 Ga0070675_100011738
322 Ga0070675_100017570
323 Ga0070671_100016910
324 Ga0070673_100002587
325 Ga0070673_100003563
326 Ga0070673_100087557
327 Ga0070688_100012124
328 Ga0070688_100022572
329 Ga0070667_100037043
330 Ga0070709_10000345
331 Ga0070709_10030072
332 Ga0070714_100002452
333 Ga0070713_100000074
334 Ga0070713_100026270
335 Ga0070713_100041726
336 Ga0070713_100054101
337 Ga0070705_100034142
338 Ga0070708_100002171
339 Ga0070708_100059222
340 Ga0070708_100060940
341 Ga0070663_100027462
342 Ga0070678_100003540
343 Ga0070662_100001453
344 Ga0070681_10005590
345 Ga0070706_100000292
346 Ga0070706_100000577
347 Ga0070707_100001900
348 Ga0070707_100018424
349 Ga0070698_100000749
350 Ga0070698_100026354
351 Ga0070698_100101372
352 Ga0070699_100012956
353 Ga0070699_100015053
354 Ga0070679_100001877
355 Ga0070679_100004858
356 Ga0070684_100032224
357 Ga0070684_100045007
358 Ga0070697_100000664
359 Ga0070697_100032981
360 Ga0070697_100041974
361 Ga0070697_100051047
362 Ga0070697_100052320
363 Ga0070697_100067752
364 Ga0070672_100001779
365 Ga0070696_100023786
366 Ga0070665_100068626
367 Ga0070665_100090712
368 Ga0068855_100003066
369 Ga0070664_100000433
370 Ga0068857_100013887
371 Ga0068854_100014777
372 Ga0068854_100031498
373 Ga0068856_100000637
374 Ga0068856_100001263
375 Ga0068856_100030844
376 Ga0068859_100000870
377 Ga0068864_100027687
378 Ga0068866_10000956
379 Ga0068863_100039153
380 Ga0068858_100091000
381 Ga0068860_100000921
382 Ga0081455_10000582
383 Ga0081540_1000340
384 Ga0081540_1002865
385 Ga0081540_1004443
386 Ga0081539_10006400
387 Ga0070717_10014347
388 Ga0070717_10035466
389 Ga0070715_10007620
390 Ga0070716_100008043
391 Ga0070712_100000555
392 Ga0070712_100002521
393 Ga0070712_100004327
394 Ga0097621_100000323
395 Ga0097621_100036087
396 Ga0068871_100000079
397 Ga0068871_100009428
398 Ga0068871_100020836
399 Ga0075434_100000013
400 Ga0075436_100002992
401 Ga0075436_100026044
402 Ga0075436_100055050
403 Ga0097620_100000870
404 Ga0075435_100000852
405 Ga0105240_10000183
406 Ga0105240_10000324
407 Ga0105240_10009620
408 Ga0105240_10144696
409 Ga0111539_10083153
410 Ga0105245_10006572
411 Ga0105241_10007814
412 Ga0105241_10038462
413 Ga0105237_10108587
414 Ga0105238_10000596
415 Ga0105238_10001355
416 Ga0105239_10010146
417 Ga0157370_10000298
418 Ga0157369_10007117
419 Ga0157369_10038236
420 Ga0157374_10000131
421 Ga0157374_10009004
422 Ga0157378_10000076
423 Ga0157378_10000544
424 Ga0163162_10019889
425 Ga0163162_10073163
426 Ga0157372_10001605
427 Ga0157372_10006321
428 Ga0157372_10009796
429 Ga0157372_10024824
430 Ga0157372_10075165
431 Ga0157375_10056230
432 Ga0157376_10021837
433 Ga0213874_10011164
434 Ga0209436_100001
435 Ga0209436_100003
436 Ga0209129_1000491
437 Ga0209673_1000397
438 Ga0209673_1000489
439 Ga0209130_1000049
440 Ga0209564_1000255
441 Ga0209758_1000175
442 Ga0209256_1000379
443 Ga0207426_1000043
444 Ga0209051_1002246
445 Ga0207697_10000407
446 Ga0207697_10000674
447 Ga0207697_10001402
448 Ga0207682_10015866
449 Ga0207685_10004441
450 Ga0207699_10000520
451 Ga0207645_10001717
452 Ga0207645_10005040
453 Ga0207645_10008841
454 Ga0207705_10001720
455 Ga0207684_10000347
456 Ga0207684_10004644
457 Ga0207684_10017406
458 Ga0207684_10023211
459 Ga0207707_10000470
460 Ga0207707_10054748
461 Ga0207695_10000072
462 Ga0207695_10000279
463 Ga0207695_10001758
464 Ga0207671_10041813
465 Ga0207693_10000178
466 Ga0207693_10000519
467 Ga0207693_10006348
468 Ga0207693_10031144
469 Ga0207693_10069247
470 Ga0207663_10015123
471 Ga0207660_10001633
472 Ga0207657_10017925
473 Ga0207652_10000795
474 Ga0207646_10000562
475 Ga0207646_10002437
476 Ga0207646_10004664
477 Ga0207646_10012039
478 Ga0207646_10070546
479 Ga0207681_10013543
480 Ga0207694_10000458
481 Ga0207694_10021301
482 Ga0207650_10006248
483 Ga0207700_10004288
484 Ga0207700_10038228
485 Ga0207706_10003634
486 Ga0207706_10094734
487 Ga0207704_10004454
488 Ga0207704_10006547
489 Ga0207665_10012942
490 Ga0207691_10001516
491 Ga0207691_10003910
492 Ga0207691_10009325
493 Ga0207689_10025314
494 Ga0207679_10006951
495 Ga0207667_10007866
496 Ga0207667_10034728
497 Ga0207640_10023091
498 Ga0207640_10047904
499 Ga0207658_10013881
500 Ga0207658_10064316
501 Ga0207677_10020890
502 Ga0207678_10013672
503 Ga0207708_10009411
504 Ga0207702_10000570
505 Ga0207702_10002670
506 Ga0207702_10006839
507 Ga0207641_10029119
508 Ga0207648_10017142
509 Ga0207676_10006427
510 Ga0207674_10000125
511 Ga0207683_10045007
512 Ga0265354_1000246
513 Ga0268266_10056820
514 Ga0268264_10000401
515 Ga0265338_10000529
516 Ga0265338_10027058
517 Ga0265770_1000063
518 Ga0265760_10000087
519 Ga0265314_10017722
520 Ga0373943_0011478
521 Ga0373935_0009191
522 Ga0373935_0023597
523 Ga0373927_0019927
524 Ga0373947_0006925
525 Ga0373925_0000874
526 Ga0395900_0003517
527 Ga0395905_0055280
528 Ga0436364_1415650
529 Ga0395901_0008695
530 Ga0436365_0432132
531 Ga0436360_1144320
532 Ga0436363_0552713
533 Ga0436363_1349550
534 Ga0451577_0070584
535 Ga0466959_0076641
536 Ga0451576_0000209
537 Ga0451576_0082000
538 Ga0495641_0007178
539 Ga0495580_0000687
540 Ga0495580_0044733
541 Ga0495664_0002233
542 Ga0495630_0000638
543 Ga0495630_0014661
544 Ga0495666_0001888
545 Ga0495665_0003112
546 Ga0495623_0066538
547 Ga0495647_0000055
548 Ga0495669_0014297
549 Ga0495624_0007920
550 Ga0495581_0001152
551 Ga0495674_0067556
552 Ga0495676_0037745
553 Ga0495684_0039495
554 Ga0495593_0000267
555 Ga0495602_0105068
556 Ga0496106_0013425
557 Ga0496107_0014146
558 Ga0496109_0064553
559 Ga0496112_0036257
560 Ga0496112_0061858
561 Ga0496113_0030565
562 Ga0496113_0080715
563 Ga0496114_0035212
564 Ga0496115_0015622
565 Ga0496115_0040852
566 Ga0496121_0027785
567 Ga0496124_0085210
568 Ga0501033_0051264
569 Ga0501034_0019775
570 Ga0501076_0021195
571 Ga0501077_0003057
572 Ga0501079_0029363
573 Ga0501081_0005305
574 Ga0501044_0064215
575 nmdc:mga0n895_65126_c1
576 nmdc:mga0n895_77261_c1
577 nmdc:mga0rr50_1113_c1
578 nmdc:mga0a205_12899_c1
579 Ga0495612_0008237
580 Ga0500608_018333
581 Ga0500637_0001785
582 Ga0501084_0009117
583 Ga0501084_0031420
584 Ga0590071_000899
585 Ga0590074_001192
586 2644732824
587 2644734507
588 2841912987
589 2841918734
590 2919167680
591 2978974139
592 2984589466

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

226

343

0.91

PF02922

CBM_48

Carbohydrate-binding module 48 (Isoamylase N-terminal domain)

61

150

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7u3b-assembly1.cif.gz_H structure of s. venezuelae glgx bound to c-di-gmp and acarbose (ph 8.5) 0.9661 6 688
7u3b-assembly1.cif.gz_C structure of s. venezuelae glgx bound to c-di-gmp and acarbose (ph 8.5) 0.9658 5 690
7u3a-assembly2.cif.gz_D structure of the streptomyces venezuelae glgx-c-di-gmp complex 0.9643 5 690
7u3a-assembly1.cif.gz_A structure of the streptomyces venezuelae glgx-c-di-gmp complex 0.9634 5 690
7u3b-assembly2.cif.gz_F structure of s. venezuelae glgx bound to c-di-gmp and acarbose (ph 8.5) 0.9618 5 688
ID Description Score Start End Superfamily
2vuyA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.976 147 567 3.20.20.80
af_P9WQ25_15_155_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9578 4 145 2.60.40.10
2wskA01 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.948 8 145 2.60.40.10
2vuyA01 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9473 1 145 2.60.40.10
2wskA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9472 148 570 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A2V5JCR0-F1-model_v4 Glycogen debranching enzyme GlgX 0.9974 1 143 GO:0004553
GO:0005975
AF-A0A3D3YWI8-F1-model_v4 Glycogen debranching enzyme 0.9967 69 338 GO:0005975
AF-A0A2V8FZ96-F1-model_v4 Glycogen debranching enzyme GlgX 0.9954 5 79 GO:0004553
GO:0005975
AF-A0A2V6A6K3-F1-model_v4 Glycogen debranching enzyme 0.9947 258 363 GO:0005975
AF-A0A060CB63-F1-model_v4 CAZy families CBM48|GH13 protein 0.9945 141 272

Map