F393150

General Info

Members Datasets Scaffolds Average Seq Length
296 213 592 497

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10058041|Ga0114129_100580413
Length 552
Sequence VPRYLCFEDIRDLAKVGLGSGIAEGFVVVPNLRTLLRRGAEAPPVELPAGVVVEPEVAEVEPSEPPQAAIPEQTRVRLAKLDALRADGVDPYPPGFTRTRGCGEVRAAYTRLAPDTATGDKVAVAGRVVLLRDHGRLWFATLRDWSGDVQVLLTGDEVLAGWKSGVDLGDHIGVSGEVITSKRGEVTVKADSWTLTAKCLHPLPDKHRGLSDPEALVRQRHLDLIVNPAAREMLRVRSAAVHAVRSTLVGRDFLEVETPILQRIHGGANARPFVTHSNAYDMRLYLRIAPELYLKRLAVGGVERVFELGRDFRNEGVDATHNPEFTMLEAYEAYGDYVTMRTLARDLIVAAATAAYGSPVARRAGQEHDLGGEWAVVTVHEAISNALGEKIDVDTPLERLRELARCAKVPVDPAWGVGALVLEMYEHLVESVTVAPTFYTDFPTEVSPLTRAHRLEPRLAERWDLVAFGMELGTAYTELIDPVEQRRRLTAQSLLAAGGDPEAMELDEDFLHTLEYAMPPTGGLGMGIDRLVMLLTGRTIRETVPFPLVRPS

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
50 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
73 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
77 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
78 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
79 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
80 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
83 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
84 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
85 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
86 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
87 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
88 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
91 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
92 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
99 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
100 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
105 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
106 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
107 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
108 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
109 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
118 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
119 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
129 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
132 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
133 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
134 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
141 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
142 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
143 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
144 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
145 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
155 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
158 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
159 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
174 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
175 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
178 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
179 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
180 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
181 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
182 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
183 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
184 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
185 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
186 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
187 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
188 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
189 2643221549 Agromyces sp. Root1464 Isolate Unclassified
190 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
191 2643221616 Leifsonia sp. Root227 Isolate Unclassified
192 2643221619 Agromyces sp. Root81 Isolate Unclassified
193 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
194 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
195 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
196 2808606372 Agromyces sp. 23-23 Isolate Unclassified
197 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
198 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
199 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
200 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
201 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
202 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
203 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
204 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
205 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
206 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
207 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
208 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
209 2928153084 Leifsonia sp. 563 Isolate Unclassified
210 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
211 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
212 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
213 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.2
Metatranscriptomes 1.35
Isolates 8.45

Biome Distribution

Category Percentage (%)
Aerial Root 0.34
Bulb 0
Endosphere 6.08
Nodule 0
Rhizoplane 9.46
Rhizosphere 77.03
Stem 0
Stem Tuber 0.34
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10058041 3300009147 Bacteria 5414
2 JGI24739J22299_10025679 3300001989 Bacteria 2072
3 JGI24735J21928_10000610 3300002067 Bacteria 12586
4 JGI25162J39368_1006729 3300002737 Bacteria 1921
5 JGI25164J39214_1000186 3300002772 Bacteria 54746
6 JGI25165J46597_1000055 3300003214 Bacteria 224187
7 Ga0006562J51391_1011799 3300003578 Bacteria 14267
8 Ga0006562J51391_1011801 3300003578 Bacteria 10580
9 Ga0055527_1000032 3300003760 Bacteria 153292
10 Ga0055542_1000164 3300003762 Bacteria 83529
11 Ga0055529_1000499 3300003763 Bacteria 35503
12 Ga0070658_10102734 3300005327 Bacteria 2364
13 Ga0070683_100211604 3300005329 Bacteria 1842
14 Ga0068869_100095951 3300005334 Bacteria 2238
15 Ga0070680_100030524 3300005336 Bacteria 4330
16 Ga0070682_100042483 3300005337 Bacteria 2806
17 Ga0070675_100156488 3300005354 Bacteria 1957
18 Ga0070709_10000303 3300005434 Bacteria 31301
19 Ga0070714_100001285 3300005435 Bacteria 18158
20 Ga0070713_100000735 3300005436 Bacteria 20988
21 Ga0070710_10000888 3300005437 Bacteria 14296
22 Ga0070706_100026784 3300005467 Bacteria 5303
23 Ga0070684_100095660 3300005535 Bacteria 2647
24 Ga0068855_100011631 3300005563 Bacteria 10634
25 Ga0068851_10000027 3300005834 Bacteria 118586
26 Ga0068870_10019382 3300005840 Bacteria 3300
27 Ga0081539_10000202 3300005985 Bacteria 138350
28 Ga0070717_10016812 3300006028 Bacteria 5678
29 Ga0070716_100000094 3300006173 Bacteria 34515
30 Ga0070712_100001346 3300006175 Bacteria 14913
31 Ga0105244_10069317 3300009036 Bacteria 1761
32 Ga0105240_10014697 3300009093 Bacteria 10678
33 Ga0105243_10075076 3300009148 Bacteria 2743
34 Ga0105248_10314529 3300009177 Bacteria 1764
35 Ga0105237_10004619 3300009545 Bacteria 15868
36 Ga0105238_10014508 3300009551 Bacteria 7968
37 Ga0105238_10172617 3300009551 Bacteria 2138
38 Ga0157373_10094731 3300013100 Bacteria 2102
39 Ga0157370_10002927 3300013104 Bacteria 20330
40 Ga0157369_10002953 3300013105 Bacteria 20328
41 Ga0157372_10076397 3300013307 Bacteria 3781
42 Ga0157375_10116992 3300013308 Bacteria 2771
43 Ga0163163_10148360 3300014325 Bacteria 2389
44 Ga0157380_10020970 3300014326 Bacteria 4895
45 Ga0163161_10101714 3300017792 Bacteria 2140
46 Ga0206351_10805781 3300020077 Bacteria 2880
47 Ga0206353_10297534 3300020082 Bacteria 3798
48 Ga0209672_100006 3300025228 Bacteria 1004497
49 Ga0209147_100227 3300025229 Bacteria 55956
50 Ga0207427_100054 3300025231 Bacteria 216315
51 Ga0209437_101292 3300025233 Bacteria 6740
52 Ga0209258_105772 3300025242 Bacteria 2038
53 Ga0209677_101566 3300025253 Bacteria 9714
54 Ga0209148_1000152 3300025254 Bacteria 153782
55 Ga0209233_1000001 3300025261 Bacteria 2992747
56 Ga0209455_1000134 3300025272 Bacteria 153783
57 Ga0207656_10000001 3300025321 Bacteria 1323684
58 Ga0207692_10000198 3300025898 Bacteria 20008
59 Ga0207647_10046329 3300025904 Bacteria 2710
60 Ga0207695_10032935 3300025913 Bacteria 5664
61 Ga0207671_10000001 3300025914 Bacteria 1318881
62 Ga0207693_10002890 3300025915 Bacteria 14857
63 Ga0207663_10000594 3300025916 Bacteria 16009
64 Ga0207646_10116861 3300025922 Bacteria 2395
65 Ga0207700_10000435 3300025928 Bacteria 24632
66 Ga0207664_10000408 3300025929 Bacteria 30794
67 Ga0207665_10001156 3300025939 Bacteria 17728
68 Ga0207711_10222301 3300025941 Bacteria 1727
69 Ga0207661_10093309 3300025944 Bacteria 2512
70 Ga0207667_10074902 3300025949 Bacteria 3515
71 Ga0207667_10144889 3300025949 Bacteria 2445
72 Ga0207703_10239135 3300026035 Bacteria 1632
73 Ga0207675_100041147 3300026118 Bacteria 4315
74 Ga0207698_10003430 3300026142 Bacteria 9541
75 Ga0207698_10082433 3300026142 Bacteria 2600
76 Ga0307511_10027535 3300030521 Bacteria 5191
77 Ga0265320_10043521 3300031240 Bacteria 2219
78 Ga0265325_10005624 3300031241 Bacteria 7716
79 Ga0265340_10009475 3300031247 Bacteria 5224
80 Ga0265340_10010029 3300031247 Bacteria 5073
81 Ga0265339_10009659 3300031249 Bacteria 6042
82 Ga0265331_10050442 3300031250 Bacteria 1996
83 Ga0265313_10033908 3300031595 Bacteria 2588
84 Ga0307508_10018027 3300031616 Bacteria 6416
85 Ga0265342_10052839 3300031712 Bacteria 2420
86 Ga0316576_10000647 3300031727 Bacteria 16856
87 Ga0316578_10029730 3300031728 Bacteria 3102
88 Ga0316577_10004364 3300031733 Bacteria 7296
89 Ga0316583_10005046 3300032133 Bacteria 4727
90 Ga0316585_10006126 3300032137 Bacteria 3427
91 Ga0307507_10000013 3300033179 Bacteria 242708
92 Ga0373951_0000190 3300035091 Bacteria 22296
93 Ga0373956_0000445 3300035119 Bacteria 16853
94 Ga0373937_0026538 3300036401 Bacteria 5233
95 Ga0316582_0022409 3300036647 Bacteria 3749
96 Ga0316584_0000620 3300036712 Bacteria 19243
97 Ga0373925_0003487 3300037068 Bacteria 12153
98 Ga0395899_0001849 3300037312 Bacteria 17519
99 Ga0395899_0071498 3300037312 Bacteria 2539
100 Ga0395900_0045741 3300037418 Bacteria 4508
101 Ga0395900_0127771 3300037418 Bacteria 2606
102 Ga0395898_0000100 3300037466 Bacteria 226446
103 Ga0316581_0001952 3300037588 Bacteria 4826
104 Ga0395901_0058803 3300038443 Bacteria 3998
105 Ga0451789_0220082 3300041443 Bacteria 1974
106 Ga0451791_0695516 3300041451 Bacteria 2781
107 Ga0451791_0844518 3300041451 Bacteria 2617
108 Ga0451853_1954099 3300041512 Bacteria 2827
109 Ga0466969_0002814 3300044656 Bacteria 9295
110 Ga0466969_0007288 3300044656 Bacteria 5882
111 Ga0466966_0003546 3300044684 Bacteria 10302
112 Ga0466966_0008561 3300044684 Bacteria 6771
113 Ga0466966_0010668 3300044684 Bacteria 6108
114 Ga0466966_0048021 3300044684 Bacteria 2720
115 Ga0466966_0100894 3300044684 Bacteria 1785
116 Ga0466961_0004779 3300044693 Bacteria 8528
117 Ga0466961_0005004 3300044693 Bacteria 8332
118 Ga0466961_0014735 3300044693 Bacteria 5024
119 Ga0466961_0017291 3300044693 Bacteria 4630
120 Ga0466961_0022466 3300044693 Bacteria 4058
121 Ga0466961_0033058 3300044693 Bacteria 3324
122 Ga0466961_0058139 3300044693 Bacteria 2460
123 Ga0466963_0022530 3300044694 Bacteria 3989
124 Ga0466963_0023614 3300044694 Bacteria 3908
125 Ga0466963_0025793 3300044694 Bacteria 3752
126 Ga0466963_0036773 3300044694 Bacteria 3194
127 Ga0466963_0038507 3300044694 Bacteria 3127
128 Ga0466963_0049041 3300044694 Bacteria 2791
129 Ga0466963_0070169 3300044694 Bacteria 2356
130 Ga0466963_0077086 3300044694 Bacteria 2252
131 Ga0466971_0000616 3300044719 Bacteria 14158
132 Ga0466971_0003789 3300044719 Bacteria 6472
133 Ga0466971_0068330 3300044719 Bacteria 1611
134 Ga0466968_0009323 3300044735 Bacteria 3776
135 Ga0466970_0031626 3300044765 Bacteria 2795
136 Ga0466970_0057687 3300044765 Bacteria 2077
137 Ga0466957_0035428 3300044842 Bacteria 2995
138 Ga0466960_0068021 3300044901 Bacteria 1766
139 Ga0466959_0005919 3300045049 Bacteria 8423
140 Ga0466959_0015179 3300045049 Bacteria 5610
141 Ga0466959_0019259 3300045049 Bacteria 5018
142 Ga0466959_0044664 3300045049 Bacteria 3264
143 Ga0466959_0046547 3300045049 Bacteria 3191
144 Ga0466959_0084381 3300045049 Bacteria 2286
145 Ga0466958_0005052 3300045836 Bacteria 7047
146 Ga0466958_0013356 3300045836 Bacteria 4674
147 Ga0466958_0024210 3300045836 Bacteria 3572
148 Ga0466958_0032249 3300045836 Bacteria 3116
149 Ga0466967_0003456 3300045976 Bacteria 10311
150 Ga0466967_0015665 3300045976 Bacteria 5952
151 Ga0466967_0020668 3300045976 Bacteria 5328
152 Ga0466967_0031920 3300045976 Bacteria 4441
153 Ga0466967_0333902 3300045976 Bacteria 1464
154 Ga0495592_0005781 3300046454 Bacteria 9161
155 Ga0495592_0039506 3300046454 Bacteria 3544
156 Ga0495651_0000079 3300046462 Bacteria 71581
157 Ga0495651_0004436 3300046462 Bacteria 10751
158 Ga0495651_0004944 3300046462 Bacteria 10184
159 Ga0495653_0017183 3300046463 Bacteria 5883
160 Ga0495580_0001834 3300046472 Bacteria 18676
161 Ga0495662_0007112 3300046476 Bacteria 5552
162 Ga0495608_0002058 3300046511 Bacteria 14476
163 Ga0495608_0002438 3300046511 Bacteria 13369
164 Ga0495618_0008390 3300046514 Bacteria 6254
165 Ga0495618_0062558 3300046514 Bacteria 2362
166 Ga0495628_0002467 3300046516 Bacteria 16679
167 Ga0495630_0025104 3300046517 Bacteria 4405
168 Ga0495666_0002972 3300046526 Bacteria 8500
169 Ga0495652_0001359 3300046529 Bacteria 27221
170 Ga0495652_0003252 3300046529 Bacteria 16193
171 Ga0495652_0096455 3300046529 Bacteria 2407
172 Ga0495665_0002983 3300046531 Bacteria 9143
173 Ga0495640_0017337 3300046533 Bacteria 5369
174 Ga0495586_0008027 3300046535 Bacteria 5631
175 Ga0495587_0016215 3300046536 Bacteria 4637
176 Ga0495645_0011599 3300046543 Bacteria 6206
177 Ga0495667_0046621 3300046559 Bacteria 2865
178 Ga0495635_0005369 3300046663 Bacteria 8919
179 Ga0495635_0007580 3300046663 Bacteria 7572
180 Ga0495635_0074117 3300046663 Bacteria 2331
181 Ga0495588_0037202 3300046674 Bacteria 2472
182 Ga0495657_0001524 3300046675 Bacteria 19942
183 Ga0495657_0002372 3300046675 Bacteria 15858
184 Ga0495623_0027833 3300046679 Bacteria 3639
185 Ga0495623_0090033 3300046679 Bacteria 1884
186 Ga0495646_0002571 3300046680 Bacteria 11156
187 Ga0495613_0001630 3300046689 Bacteria 17074
188 Ga0495600_0004981 3300046809 Bacteria 7980
189 Ga0495600_0041815 3300046809 Bacteria 2987
190 Ga0495604_0001576 3300047317 Bacteria 18784
191 Ga0495604_0005182 3300047317 Bacteria 10324
192 Ga0495604_0010009 3300047317 Bacteria 7506
193 Ga0495674_0008641 3300047319 Bacteria 9683
194 Ga0495674_0087974 3300047319 Bacteria 2657
195 Ga0495680_0009249 3300047322 Bacteria 8878
196 Ga0495675_0014834 3300047444 Bacteria 4927
197 Ga0495684_0023198 3300047471 Bacteria 4770
198 Ga0495593_0026760 3300047673 Bacteria 3181
199 Ga0495602_0098379 3300048088 Bacteria 2407
200 Ga0495626_0002786 3300048091 Bacteria 11726
201 Ga0496101_0099858 3300048904 Bacteria 2170
202 Ga0496102_0073552 3300048905 Bacteria 3141
203 Ga0496102_0120583 3300048905 Bacteria 2449
204 Ga0496104_0028957 3300048907 Bacteria 5136
205 Ga0496104_0060916 3300048907 Bacteria 3576
206 Ga0496104_0136816 3300048907 Bacteria 2354
207 Ga0496104_0277890 3300048907 Bacteria 1588
208 Ga0496104_0327226 3300048907 Bacteria 1446
209 Ga0496105_0053110 3300048908 Bacteria 3346
210 Ga0496107_0110907 3300048910 Bacteria 2016
211 Ga0496108_0029493 3300048911 Bacteria 4544
212 Ga0496108_0044894 3300048911 Bacteria 3690
213 Ga0496108_0177099 3300048911 Bacteria 1846
214 Ga0496109_0027392 3300048912 Bacteria 5087
215 Ga0496110_0077218 3300048913 Bacteria 2962
216 Ga0496110_0172906 3300048913 Bacteria 1960
217 Ga0496112_0042956 3300048915 Bacteria 4424
218 Ga0496113_0093596 3300048916 Bacteria 2320
219 Ga0496114_0016122 3300048917 Bacteria 6013
220 Ga0496114_0073511 3300048917 Bacteria 2877
221 Ga0496114_0077072 3300048917 Bacteria 2810
222 Ga0496114_0103396 3300048917 Bacteria 2435
223 Ga0496114_0225401 3300048917 Bacteria 1646
224 Ga0496115_0032011 3300048918 Bacteria 4148
225 Ga0496115_0124992 3300048918 Bacteria 2118
226 Ga0496117_0007057 3300048920 Bacteria 11111
227 Ga0496118_0001658 3300048921 Bacteria 32704
228 Ga0496124_0000090 3300048927 Bacteria 192095
229 Ga0496126_0191315 3300048929 Bacteria 1733
230 Ga0501031_0094786 3300049568 Bacteria 1947
231 Ga0501031_0100046 3300049568 Bacteria 1892
232 Ga0501032_0010124 3300049569 Bacteria 6805
233 Ga0501032_0066412 3300049569 Bacteria 2410
234 Ga0501033_0000727 3300049570 Bacteria 30225
235 Ga0501033_0003904 3300049570 Bacteria 12121
236 Ga0501033_0046090 3300049570 Bacteria 3242
237 Ga0501036_0000506 3300049572 Bacteria 27913
238 Ga0501036_0005666 3300049572 Bacteria 10134
239 Ga0501037_0009755 3300049573 Bacteria 7050
240 Ga0501038_0147194 3300049574 Bacteria 1922
241 Ga0501040_0031196 3300049576 Bacteria 3599
242 Ga0501041_0011819 3300049577 Bacteria 5166
243 Ga0501042_0040458 3300049578 Bacteria 3314
244 Ga0501046_0038491 3300049580 Bacteria 3838
245 Ga0501046_0050582 3300049580 Bacteria 3282
246 Ga0501047_0000213 3300049581 Bacteria 69459
247 Ga0501047_0082236 3300049581 Bacteria 3095
248 Ga0501047_0115830 3300049581 Bacteria 2562
249 Ga0501048_0018385 3300049582 Bacteria 5141
250 Ga0501048_0029974 3300049582 Bacteria 3941
251 Ga0501070_0000034 3300049586 Bacteria 128605
252 Ga0501075_0129777 3300049591 Bacteria 1920
253 Ga0501035_0018140 3300049822 Bacteria 6484
254 Ga0501035_0040320 3300049822 Bacteria 4221
255 Ga0501044_0033337 3300049823 Bacteria 5413
256 Ga0501045_0036592 3300049824 Bacteria 3565
257 nmdc:mga0sz30_36203_c2 3300050516 Bacteria 1621
258 Ga0495601_0004500 3300053077 Bacteria 8056
259 Ga0495612_0010632 3300053078 Bacteria 3720
260 Ga0495612_0046793 3300053078 Bacteria 1772
261 Ga0495595_0008291 3300053084 Bacteria 4266
262 Ga0495619_0065099 3300053085 Bacteria 2431
263 Ga0495619_0101052 3300053085 Bacteria 1963
264 Ga0500643_006317 3300053087 Bacteria 4967
265 Ga0500573_0000052 3300053140 Bacteria 94687
266 Ga0501084_0019307 3300054114 Bacteria 5679
267 Ga0501082_0088860 3300060353 Bacteria 2667
268 Ga0466962_0000100 3300061719 Bacteria 34830
269 Ga0466962_0006131 3300061719 Bacteria 5778
270 Ga0466962_0045984 3300061719 Bacteria 2086
271 Ga0530510_0003495 3300061734 Bacteria 10800
272 2643768705 2643221549 Bacteria 4042819
273 2644014691 2643221601 Bacteria 7493239
274 2644098058 2643221616 Bacteria 4066575
275 2644112111 2643221619 Bacteria 4158469
276 2644176127 2643221631 Bacteria 8168043
277 2676474531 2675903058 Bacteria 6822861
278 2723643254 2721755702 Bacteria 4373124
279 2808900910 2808606372 Bacteria 4649509
280 2819742100 2818991472 Bacteria 10089953
281 2827632995 2827628540 Bacteria 6858585
282 2837274902 2837268691 Bacteria 7850704
283 2844843484 2844841374 Bacteria 3917147
284 2862993723 2862993130 Bacteria 3860849
285 2868095249 2868088558 Bacteria 7609351
286 2870625611 2870622029 Bacteria 3643329
287 2884766624 2884763398 Bacteria 4091164
288 2919046151 2919042368 Bacteria 3905917
289 2919055491 2919055335 Bacteria 3875751
290 2919445476 2919443155 Bacteria 4072969
291 2928108125 2928104781 Bacteria 3877447
292 2928153645 2928153084 Bacteria 4020257
293 2935411996 2935409751 Bacteria 4179611
294 2939660723 2939657138 Bacteria 3740283
295 2984552414 2984551494 Bacteria 3877562
296 2995468007 2995463766 Bacteria 8577691
297 Ga0114129_10058041
298 JGI24739J22299_10025679
299 JGI24735J21928_10000610
300 JGI25162J39368_1006729
301 JGI25164J39214_1000186
302 JGI25165J46597_1000055
303 Ga0006562J51391_1011799
304 Ga0006562J51391_1011801
305 Ga0055527_1000032
306 Ga0055542_1000164
307 Ga0055529_1000499
308 Ga0070658_10102734
309 Ga0070683_100211604
310 Ga0068869_100095951
311 Ga0070680_100030524
312 Ga0070682_100042483
313 Ga0070675_100156488
314 Ga0070709_10000303
315 Ga0070714_100001285
316 Ga0070713_100000735
317 Ga0070710_10000888
318 Ga0070706_100026784
319 Ga0070684_100095660
320 Ga0068855_100011631
321 Ga0068851_10000027
322 Ga0068870_10019382
323 Ga0081539_10000202
324 Ga0070717_10016812
325 Ga0070716_100000094
326 Ga0070712_100001346
327 Ga0105244_10069317
328 Ga0105240_10014697
329 Ga0105243_10075076
330 Ga0105248_10314529
331 Ga0105237_10004619
332 Ga0105238_10014508
333 Ga0105238_10172617
334 Ga0157373_10094731
335 Ga0157370_10002927
336 Ga0157369_10002953
337 Ga0157372_10076397
338 Ga0157375_10116992
339 Ga0163163_10148360
340 Ga0157380_10020970
341 Ga0163161_10101714
342 Ga0206351_10805781
343 Ga0206353_10297534
344 Ga0209672_100006
345 Ga0209147_100227
346 Ga0207427_100054
347 Ga0209437_101292
348 Ga0209258_105772
349 Ga0209677_101566
350 Ga0209148_1000152
351 Ga0209233_1000001
352 Ga0209455_1000134
353 Ga0207656_10000001
354 Ga0207692_10000198
355 Ga0207647_10046329
356 Ga0207695_10032935
357 Ga0207671_10000001
358 Ga0207693_10002890
359 Ga0207663_10000594
360 Ga0207646_10116861
361 Ga0207700_10000435
362 Ga0207664_10000408
363 Ga0207665_10001156
364 Ga0207711_10222301
365 Ga0207661_10093309
366 Ga0207667_10074902
367 Ga0207667_10144889
368 Ga0207703_10239135
369 Ga0207675_100041147
370 Ga0207698_10003430
371 Ga0207698_10082433
372 Ga0307511_10027535
373 Ga0265320_10043521
374 Ga0265325_10005624
375 Ga0265340_10009475
376 Ga0265340_10010029
377 Ga0265339_10009659
378 Ga0265331_10050442
379 Ga0265313_10033908
380 Ga0307508_10018027
381 Ga0265342_10052839
382 Ga0316576_10000647
383 Ga0316578_10029730
384 Ga0316577_10004364
385 Ga0316583_10005046
386 Ga0316585_10006126
387 Ga0307507_10000013
388 Ga0373951_0000190
389 Ga0373956_0000445
390 Ga0373937_0026538
391 Ga0316582_0022409
392 Ga0316584_0000620
393 Ga0373925_0003487
394 Ga0395899_0001849
395 Ga0395899_0071498
396 Ga0395900_0045741
397 Ga0395900_0127771
398 Ga0395898_0000100
399 Ga0316581_0001952
400 Ga0395901_0058803
401 Ga0451789_0220082
402 Ga0451791_0695516
403 Ga0451791_0844518
404 Ga0451853_1954099
405 Ga0466969_0002814
406 Ga0466969_0007288
407 Ga0466966_0003546
408 Ga0466966_0008561
409 Ga0466966_0010668
410 Ga0466966_0048021
411 Ga0466966_0100894
412 Ga0466961_0004779
413 Ga0466961_0005004
414 Ga0466961_0014735
415 Ga0466961_0017291
416 Ga0466961_0022466
417 Ga0466961_0033058
418 Ga0466961_0058139
419 Ga0466963_0022530
420 Ga0466963_0023614
421 Ga0466963_0025793
422 Ga0466963_0036773
423 Ga0466963_0038507
424 Ga0466963_0049041
425 Ga0466963_0070169
426 Ga0466963_0077086
427 Ga0466971_0000616
428 Ga0466971_0003789
429 Ga0466971_0068330
430 Ga0466968_0009323
431 Ga0466970_0031626
432 Ga0466970_0057687
433 Ga0466957_0035428
434 Ga0466960_0068021
435 Ga0466959_0005919
436 Ga0466959_0015179
437 Ga0466959_0019259
438 Ga0466959_0044664
439 Ga0466959_0046547
440 Ga0466959_0084381
441 Ga0466958_0005052
442 Ga0466958_0013356
443 Ga0466958_0024210
444 Ga0466958_0032249
445 Ga0466967_0003456
446 Ga0466967_0015665
447 Ga0466967_0020668
448 Ga0466967_0031920
449 Ga0466967_0333902
450 Ga0495592_0005781
451 Ga0495592_0039506
452 Ga0495651_0000079
453 Ga0495651_0004436
454 Ga0495651_0004944
455 Ga0495653_0017183
456 Ga0495580_0001834
457 Ga0495662_0007112
458 Ga0495608_0002058
459 Ga0495608_0002438
460 Ga0495618_0008390
461 Ga0495618_0062558
462 Ga0495628_0002467
463 Ga0495630_0025104
464 Ga0495666_0002972
465 Ga0495652_0001359
466 Ga0495652_0003252
467 Ga0495652_0096455
468 Ga0495665_0002983
469 Ga0495640_0017337
470 Ga0495586_0008027
471 Ga0495587_0016215
472 Ga0495645_0011599
473 Ga0495667_0046621
474 Ga0495635_0005369
475 Ga0495635_0007580
476 Ga0495635_0074117
477 Ga0495588_0037202
478 Ga0495657_0001524
479 Ga0495657_0002372
480 Ga0495623_0027833
481 Ga0495623_0090033
482 Ga0495646_0002571
483 Ga0495613_0001630
484 Ga0495600_0004981
485 Ga0495600_0041815
486 Ga0495604_0001576
487 Ga0495604_0005182
488 Ga0495604_0010009
489 Ga0495674_0008641
490 Ga0495674_0087974
491 Ga0495680_0009249
492 Ga0495675_0014834
493 Ga0495684_0023198
494 Ga0495593_0026760
495 Ga0495602_0098379
496 Ga0495626_0002786
497 Ga0496101_0099858
498 Ga0496102_0073552
499 Ga0496102_0120583
500 Ga0496104_0028957
501 Ga0496104_0060916
502 Ga0496104_0136816
503 Ga0496104_0277890
504 Ga0496104_0327226
505 Ga0496105_0053110
506 Ga0496107_0110907
507 Ga0496108_0029493
508 Ga0496108_0044894
509 Ga0496108_0177099
510 Ga0496109_0027392
511 Ga0496110_0077218
512 Ga0496110_0172906
513 Ga0496112_0042956
514 Ga0496113_0093596
515 Ga0496114_0016122
516 Ga0496114_0073511
517 Ga0496114_0077072
518 Ga0496114_0103396
519 Ga0496114_0225401
520 Ga0496115_0032011
521 Ga0496115_0124992
522 Ga0496117_0007057
523 Ga0496118_0001658
524 Ga0496124_0000090
525 Ga0496126_0191315
526 Ga0501031_0094786
527 Ga0501031_0100046
528 Ga0501032_0010124
529 Ga0501032_0066412
530 Ga0501033_0000727
531 Ga0501033_0003904
532 Ga0501033_0046090
533 Ga0501036_0000506
534 Ga0501036_0005666
535 Ga0501037_0009755
536 Ga0501038_0147194
537 Ga0501040_0031196
538 Ga0501041_0011819
539 Ga0501042_0040458
540 Ga0501046_0038491
541 Ga0501046_0050582
542 Ga0501047_0000213
543 Ga0501047_0082236
544 Ga0501047_0115830
545 Ga0501048_0018385
546 Ga0501048_0029974
547 Ga0501070_0000034
548 Ga0501075_0129777
549 Ga0501035_0018140
550 Ga0501035_0040320
551 Ga0501044_0033337
552 Ga0501045_0036592
553 nmdc:mga0sz30_36203_c2
554 Ga0495601_0004500
555 Ga0495612_0010632
556 Ga0495612_0046793
557 Ga0495595_0008291
558 Ga0495619_0065099
559 Ga0495619_0101052
560 Ga0500643_006317
561 Ga0500573_0000052
562 Ga0501084_0019307
563 Ga0501082_0088860
564 Ga0466962_0000100
565 Ga0466962_0006131
566 Ga0466962_0045984
567 Ga0530510_0003495
568 2643768705
569 2644014691
570 2644098058
571 2644112111
572 2644176127
573 2676474531
574 2723643254
575 2808900910
576 2819742100
577 2827632995
578 2837274902
579 2844843484
580 2862993723
581 2868095249
582 2870625611
583 2884766624
584 2919046151
585 2919055491
586 2919445476
587 2928108125
588 2928153645
589 2935411996
590 2939660723
591 2984552414
592 2995468007

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

122

196

0.98

PF00152

tRNA-synt_2

tRNA synthetases class II (D, K and N)

212

550

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qhn-assembly1.cif.gz_A-2 crystal structure of lysyl-trna synthetase from mycobacterium tuberculosis complexed with l-lysine and an inhibitor 0.9386 16 499
7qi8-assembly1.cif.gz_A-2 crystal structure of lysyl-trna synthetase from mycobacterium tuberculosis complexed with l-lysine and inhibitor 0.9364 16 499
7qhn-assembly1.cif.gz_A-2 crystal structure of lysyl-trna synthetase from mycobacterium tuberculosis complexed with l-lysine and an inhibitor 0.9346 16 499
7qi8-assembly1.cif.gz_A-2 crystal structure of lysyl-trna synthetase from mycobacterium tuberculosis complexed with l-lysine and inhibitor 0.9325 16 499
7qh8-assembly1.cif.gz_A-2 crystal structure of lysyl-trna synthetase from mycobacterium tuberculosis complexed with l-lysine 0.9316 15 500
ID Description Score Start End Superfamily
6aqhD01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9811 15 156 2.40.50.140
6aqhD01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9406 15 156 2.40.50.140
af_Q9LJE2_81_222_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9365 14 156 2.40.50.140
af_Q9LJE2_81_222_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9237 14 156 2.40.50.140
4up8A01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9182 13 160 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A2S9FML7-F1-model_v4 Lysine--tRNA ligase 0.984 17 156 GO:0000049
GO:0000166
GO:0004824
GO:0005829
GO:0006430
AF-U6S819-F1-model_v4 deleted 0.9733 15 178
AF-A0A3E2CIZ8-F1-model_v4 deleted 0.9727 15 154
AF-A0A2S9FML7-F1-model_v4 Lysine--tRNA ligase 0.9699 17 156 GO:0000049
GO:0000166
GO:0004824
GO:0005829
GO:0006430
AF-A0A2S8LPZ9-F1-model_v4 deleted 0.9532 235 396

Map