F393033

General Info

Members Datasets Scaffolds Average Seq Length
296 170 592 318

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100103104|Ga0070671_1001031042
Length 336
Sequence MRWPPRRCSSSVVMGSLQMGETLRVGTRSSELALRQARLVQAALLERGVESELVTYKTLGDKRLDEPLSAIGAKGLFTKELEVDLRKGKTDLAVHSLKDLPTDSPPGLLVAAVLEREDPRDALVLNRDIMGQSFDDLPRGSRVGTSSLRRRAQLLALRPDLDVAELRGNVPTRLKKVDEGRVHAAILAAAGLHRLGAHQHITCYLDAPQWLPAAGQGAIAIQVREDDARMRAHADALNDAPTMLAVRAERAFLQALEGGCQVPIGALAVPTDGGALLHGMIADVRGSRVVRGTIALDVAEPELSGVRLANQLRGEGATEILEGLRRANHLPAPQPE

Samples

Sample ID Description Type Environment
1 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
115 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
118 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
119 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
120 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
121 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
126 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
127 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
128 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
151 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
152 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
153 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
154 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
155 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
156 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
157 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.36
Rhizosphere 96.28
Stem 0
Stem Tuber 0
Unclassified 9.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070671_100103104 3300005355 Bacteria 2394
2 Ga0070658_10001684 3300005327 Bacteria 18659
3 Ga0070658_10006841 3300005327 Bacteria 9218
4 Ga0070658_10010597 3300005327 Bacteria 7386
5 Ga0070658_10041139 3300005327 Bacteria 3728
6 Ga0070676_10077509 3300005328 Bacteria 2009
7 Ga0070683_100007401 3300005329 Bacteria 9275
8 Ga0070683_100028086 3300005329 Bacteria 5081
9 Ga0070683_100044338 3300005329 Unclassified 4101
10 Ga0070683_100089162 3300005329 Bacteria 2894
11 Ga0070683_100099695 3300005329 Bacteria 2734
12 Ga0070683_100200652 3300005329 Bacteria 1894
13 Ga0070683_100242607 3300005329 Bacteria 1714
14 Ga0070680_100040408 3300005336 Bacteria 3777
15 Ga0070680_100365010 3300005336 Bacteria 1228
16 Ga0068868_100087839 3300005338 Bacteria 2501
17 Ga0070660_100015760 3300005339 Bacteria 5467
18 Ga0070660_100196367 3300005339 Bacteria 1636
19 Ga0070687_100025210 3300005343 Bacteria 2850
20 Ga0070661_100011533 3300005344 Bacteria 6157
21 Ga0070661_100014758 3300005344 Bacteria 5508
22 Ga0070661_100071360 3300005344 Bacteria 2556
23 Ga0070661_100084199 3300005344 Unclassified 2349
24 Ga0070692_10014144 3300005345 Bacteria 3738
25 Ga0070668_100058999 3300005347 Bacteria 2970
26 Ga0070668_100328143 3300005347 Bacteria 1290
27 Ga0070669_100025604 3300005353 Bacteria 4238
28 Ga0070675_100094120 3300005354 Bacteria 2514
29 Ga0070674_100224969 3300005356 Bacteria 1461
30 Ga0070674_100282456 3300005356 Bacteria 1316
31 Ga0070673_100249068 3300005364 Bacteria 1548
32 Ga0070673_100317706 3300005364 Bacteria 1375
33 Ga0070688_100005628 3300005365 Bacteria 6612
34 Ga0070659_100009796 3300005366 Bacteria 7042
35 Ga0070659_100057310 3300005366 Bacteria 3072
36 Ga0070659_100281864 3300005366 Bacteria 1383
37 Ga0070703_10038093 3300005406 Bacteria 1485
38 Ga0070714_100014385 3300005435 Bacteria 6357
39 Ga0070714_100042820 3300005435 Bacteria 3826
40 Ga0070713_100012772 3300005436 Bacteria 6173
41 Ga0070694_100166430 3300005444 Bacteria 1621
42 Ga0070708_100021726 3300005445 Bacteria 5433
43 Ga0070708_100162032 3300005445 Bacteria 2084
44 Ga0070662_100025961 3300005457 Bacteria 4051
45 Ga0070662_100253756 3300005457 Bacteria 1415
46 Ga0070681_10000910 3300005458 Bacteria 24995
47 Ga0070681_10015910 3300005458 Bacteria 7501
48 Ga0070681_10038428 3300005458 Bacteria 4799
49 Ga0070681_10048655 3300005458 Bacteria 4236
50 Ga0070681_10059726 3300005458 Bacteria 3792
51 Ga0070681_10369957 3300005458 Bacteria 1344
52 Ga0068867_100005836 3300005459 Bacteria 8733
53 Ga0068867_100200858 3300005459 Bacteria 1596
54 Ga0070706_100001092 3300005467 Bacteria 29314
55 Ga0070707_100002168 3300005468 Bacteria 18792
56 Ga0070699_100115472 3300005518 Bacteria 2359
57 Ga0070699_100317939 3300005518 Bacteria 1399
58 Ga0070679_100003788 3300005530 Bacteria 13877
59 Ga0070679_100004797 3300005530 Bacteria 12472
60 Ga0070679_100005530 3300005530 Bacteria 11707
61 Ga0070679_100053356 3300005530 Bacteria 4025
62 Ga0070679_100225927 3300005530 Unclassified 1832
63 Ga0070679_100242304 3300005530 Bacteria 1760
64 Ga0070679_100426766 3300005530 Unclassified 1271
65 Ga0070679_100493360 3300005530 Bacteria 1169
66 Ga0070679_100505402 3300005530 Bacteria 1152
67 Ga0070679_100533838 3300005530 Bacteria 1117
68 Ga0070684_100006628 3300005535 Bacteria 8970
69 Ga0070684_100030288 3300005535 Bacteria 4596
70 Ga0070684_100063573 3300005535 Unclassified 3236
71 Ga0070697_100087072 3300005536 Bacteria 2579
72 Ga0070697_100116407 3300005536 Bacteria 2232
73 Ga0068853_100000831 3300005539 Bacteria 21610
74 Ga0068853_100110790 3300005539 Bacteria 2438
75 Ga0068853_100453267 3300005539 Bacteria 1207
76 Ga0070672_100019016 3300005543 Bacteria 4978
77 Ga0070672_100023088 3300005543 Bacteria 4580
78 Ga0070672_100060637 3300005543 Bacteria 2979
79 Ga0070672_100241391 3300005543 Bacteria 1520
80 Ga0070693_100042883 3300005547 Bacteria 2552
81 Ga0070693_100043322 3300005547 Bacteria 2541
82 Ga0070665_100068651 3300005548 Bacteria 3554
83 Ga0070704_100108282 3300005549 Bacteria 2109
84 Ga0068855_100007746 3300005563 Bacteria 12973
85 Ga0068855_100062914 3300005563 Bacteria 4331
86 Ga0068855_100135362 3300005563 Bacteria 2811
87 Ga0068855_100241386 3300005563 Bacteria 2019
88 Ga0070664_100001672 3300005564 Bacteria 17753
89 Ga0070664_100006199 3300005564 Bacteria 9661
90 Ga0070664_100136203 3300005564 Bacteria 2159
91 Ga0068854_100006143 3300005578 Bacteria 7622
92 Ga0070702_100020765 3300005615 Bacteria 3446
93 Ga0068852_100220929 3300005616 Bacteria 1802
94 Ga0068859_100097228 3300005617 Bacteria 2997
95 Ga0068863_100111863 3300005841 Bacteria 2601
96 Ga0070716_100170087 3300006173 Unclassified 1421
97 Ga0075430_100010414 3300006846 Bacteria 7872
98 Ga0075430_100072550 3300006846 Bacteria 2887
99 Ga0075431_100068655 3300006847 Bacteria 3657
100 Ga0075431_100161963 3300006847 Bacteria 2300
101 Ga0075434_100162099 3300006871 Unclassified 2256
102 Ga0075429_100185489 3300006880 Bacteria 1823
103 Ga0068865_100071816 3300006881 Bacteria 2456
104 Ga0097620_100097239 3300006931 Bacteria 2997
105 Ga0111539_10339896 3300009094 Bacteria 1747
106 Ga0105245_10013867 3300009098 Bacteria 7022
107 Ga0105245_10196702 3300009098 Bacteria 1934
108 Ga0105243_10111912 3300009148 Bacteria 2286
109 Ga0105248_10068355 3300009177 Bacteria 3989
110 Ga0105237_10211837 3300009545 Bacteria 1938
111 Ga0105238_10028028 3300009551 Bacteria 5739
112 Ga0105249_10000081 3300009553 Bacteria 137945
113 Ga0099796_10107252 3300010159 Bacteria 1059
114 Ga0157373_10048297 3300013100 Bacteria 3034
115 Ga0157373_10083725 3300013100 Bacteria 2248
116 Ga0157373_10197590 3300013100 Bacteria 1418
117 Ga0157371_10088915 3300013102 Bacteria 2188
118 Ga0157370_10000540 3300013104 Bacteria 47409
119 Ga0157370_10029370 3300013104 Bacteria 5396
120 Ga0157370_10245490 3300013104 Bacteria 1656
121 Ga0157369_10002739 3300013105 Bacteria 21042
122 Ga0157369_10086275 3300013105 Bacteria 3352
123 Ga0157369_10094437 3300013105 Bacteria 3192
124 Ga0157369_10226007 3300013105 Bacteria 1958
125 Ga0157378_10007117 3300013297 Bacteria 9768
126 Ga0157378_10027127 3300013297 Bacteria 5053
127 Ga0157378_10102218 3300013297 Bacteria 2618
128 Ga0157378_10160701 3300013297 Bacteria 2101
129 Ga0163162_10096149 3300013306 Unclassified 3050
130 Ga0157372_10001743 3300013307 Bacteria 23591
131 Ga0157372_10002145 3300013307 Bacteria 21444
132 Ga0157372_10007923 3300013307 Bacteria 11293
133 Ga0157372_10073740 3300013307 Bacteria 3848
134 Ga0157372_10185550 3300013307 Bacteria 2408
135 Ga0157375_10165516 3300013308 Bacteria 2356
136 Ga0157375_10326269 3300013308 Bacteria 1700
137 Ga0182008_10035420 3300014497 Bacteria 2500
138 Ga0157376_10098350 3300014969 Bacteria 2551
139 Ga0213876_10055292 3300021384 Unclassified 2096
140 Ga0207682_10003084 3300025893 Bacteria 7302
141 Ga0207643_10027760 3300025908 Bacteria 3141
142 Ga0207705_10002651 3300025909 Bacteria 13705
143 Ga0207705_10005180 3300025909 Bacteria 9776
144 Ga0207684_10000022 3300025910 Bacteria 337007
145 Ga0207707_10029128 3300025912 Bacteria 4826
146 Ga0207707_10050370 3300025912 Bacteria 3628
147 Ga0207707_10052885 3300025912 Unclassified 3535
148 Ga0207695_10009902 3300025913 Bacteria 11713
149 Ga0207657_10002151 3300025919 Bacteria 21361
150 Ga0207657_10052359 3300025919 Bacteria 3543
151 Ga0207649_10073123 3300025920 Bacteria 2195
152 Ga0207649_10083418 3300025920 Bacteria 2075
153 Ga0207649_10235192 3300025920 Bacteria 1312
154 Ga0207652_10014000 3300025921 Bacteria 6494
155 Ga0207652_10033855 3300025921 Bacteria 4303
156 Ga0207652_10251705 3300025921 Bacteria 1593
157 Ga0207646_10306754 3300025922 Bacteria 1434
158 Ga0207681_10013611 3300025923 Bacteria 5037
159 Ga0207687_10011107 3300025927 Bacteria 5887
160 Ga0207700_10113849 3300025928 Bacteria 2182
161 Ga0207664_10147655 3300025929 Unclassified 1995
162 Ga0207644_10118751 3300025931 Bacteria 2010
163 Ga0207690_10007736 3300025932 Bacteria 6377
164 Ga0207690_10036145 3300025932 Bacteria 3196
165 Ga0207706_10016610 3300025933 Bacteria 6643
166 Ga0207706_10156651 3300025933 Bacteria 2003
167 Ga0207709_10089531 3300025935 Bacteria 2007
168 Ga0207669_10011782 3300025937 Bacteria 4272
169 Ga0207704_10185427 3300025938 Bacteria 1508
170 Ga0207691_10015328 3300025940 Bacteria 7291
171 Ga0207691_10016949 3300025940 Bacteria 6913
172 Ga0207691_10098687 3300025940 Bacteria 2609
173 Ga0207711_10503601 3300025941 Unclassified 1129
174 Ga0207661_10043939 3300025944 Bacteria 3528
175 Ga0207661_10065663 3300025944 Bacteria 2946
176 Ga0207661_10131749 3300025944 Bacteria 2142
177 Ga0207661_10151827 3300025944 Bacteria 2003
178 Ga0207661_10345972 3300025944 Bacteria 1340
179 Ga0207679_10013224 3300025945 Bacteria 5407
180 Ga0207679_10125476 3300025945 Bacteria 2050
181 Ga0207667_10039129 3300025949 Bacteria 5056
182 Ga0207667_10134668 3300025949 Bacteria 2544
183 Ga0207667_10216678 3300025949 Unclassified 1962
184 Ga0207667_10294352 3300025949 Bacteria 1658
185 Ga0207651_10272599 3300025960 Bacteria 1394
186 Ga0207712_10000087 3300025961 Bacteria 106680
187 Ga0207668_10336727 3300025972 Bacteria 1257
188 Ga0207640_10041786 3300025981 Bacteria 2919
189 Ga0207658_10125290 3300025986 Bacteria 2055
190 Ga0207658_10262686 3300025986 Bacteria 1472
191 Ga0207677_10056444 3300026023 Bacteria 2691
192 Ga0207639_10009564 3300026041 Bacteria 6691
193 Ga0207678_10013392 3300026067 Bacteria 7198
194 Ga0207708_10005090 3300026075 Bacteria 9698
195 Ga0207708_10214228 3300026075 Bacteria 1541
196 Ga0207641_10078146 3300026088 Bacteria 2866
197 Ga0207648_10018268 3300026089 Bacteria 6352
198 Ga0207648_10045356 3300026089 Bacteria 3856
199 Ga0207674_10054962 3300026116 Bacteria 4051
200 Ga0207674_10063406 3300026116 Bacteria 3731
201 Ga0207675_100698492 3300026118 Bacteria 1023
202 Ga0207698_10009908 3300026142 Bacteria 6096
203 Ga0207698_10172825 3300026142 Bacteria 1905
204 Ga0207698_10363188 3300026142 Bacteria 1372
205 Ga0209998_10000749 3300027717 Bacteria 8532
206 Ga0307408_100007647 3300031548 Bacteria 7147
207 Ga0307408_100007866 3300031548 Bacteria 7048
208 Ga0307408_100163346 3300031548 Bacteria 1771
209 Ga0307405_10008916 3300031731 Bacteria 5115
210 Ga0307405_10012922 3300031731 Unclassified 4440
211 Ga0307413_10010068 3300031824 Bacteria 4561
212 Ga0307413_10027781 3300031824 Bacteria 3141
213 Ga0307413_10103604 3300031824 Bacteria 1887
214 Ga0307413_10138321 3300031824 Unclassified 1679
215 Ga0307406_10033709 3300031901 Unclassified 3136
216 Ga0307406_10127827 3300031901 Bacteria 1778
217 Ga0307406_10236109 3300031901 Bacteria 1368
218 Ga0307407_10034407 3300031903 Bacteria 2773
219 Ga0307412_10003888 3300031911 Bacteria 8312
220 Ga0307412_10052529 3300031911 Bacteria 2699
221 Ga0307409_100018466 3300031995 Unclassified 4690
222 Ga0307409_100048688 3300031995 Bacteria 3227
223 Ga0307409_100056675 3300031995 Unclassified 3032
224 Ga0307409_100098214 3300031995 Bacteria 2421
225 Ga0307409_100109177 3300031995 Bacteria 2316
226 Ga0307416_100012696 3300032002 Bacteria 5688
227 Ga0307416_100066894 3300032002 Bacteria 2961
228 Ga0307416_100089932 3300032002 Bacteria 2631
229 Ga0307416_100302953 3300032002 Bacteria 1590
230 Ga0307414_10023508 3300032004 Bacteria 3910
231 Ga0307414_10080993 3300032004 Bacteria 2376
232 Ga0307414_10082500 3300032004 Bacteria 2357
233 Ga0307411_10000515 3300032005 Bacteria 13602
234 Ga0307411_10008989 3300032005 Bacteria 5219
235 Ga0307411_10125178 3300032005 Unclassified 1868
236 Ga0373956_0011078 3300035119 Bacteria 3712
237 Ga0373957_0022392 3300035120 Bacteria 2252
238 Ga0436365_0170435 3300039437 Bacteria 3809
239 Ga0436365_0931492 3300039437 Bacteria 11326
240 Ga0436365_0998873 3300039437 Unclassified 2560
241 Ga0466967_0066240 3300045976 Bacteria 3218
242 Ga0495628_0089130 3300046516 Bacteria 2390
243 Ga0495628_0167744 3300046516 Bacteria 1666
244 Ga0495587_0001658 3300046536 Bacteria 14860
245 Ga0495621_0059171 3300046539 Bacteria 1388
246 Ga0495645_0000127 3300046543 Bacteria 51432
247 Ga0495623_0002198 3300046679 Bacteria 12998
248 Ga0495675_0192303 3300047444 Bacteria 1245
249 Ga0495684_0130526 3300047471 Bacteria 1888
250 Ga0495602_0107496 3300048088 Bacteria 2274
251 Ga0495602_0130441 3300048088 Bacteria 2006
252 Ga0495615_0013272 3300048090 Bacteria 1718
253 Ga0496100_0012599 3300048903 Bacteria 4852
254 Ga0496108_0276892 3300048911 Bacteria 1461
255 Ga0496111_0171914 3300048914 Bacteria 1610
256 Ga0496112_0192076 3300048915 Bacteria 2003
257 Ga0496113_0202103 3300048916 Bacteria 1579
258 Ga0496114_0047792 3300048917 Bacteria 3559
259 Ga0496115_0001640 3300048918 Bacteria 16089
260 Ga0501298_015886 3300049521 Bacteria 1360
261 Ga0501033_0009285 3300049570 Bacteria 7577
262 Ga0501036_0008351 3300049572 Bacteria 8486
263 Ga0501036_0040188 3300049572 Bacteria 3956
264 Ga0501039_0284332 3300049575 Bacteria 1300
265 Ga0501040_0024579 3300049576 Bacteria 4044
266 Ga0501042_0017016 3300049578 Bacteria 5006
267 Ga0501043_0049669 3300049579 Bacteria 3298
268 Ga0501047_0013067 3300049581 Bacteria 7864
269 Ga0501047_0014525 3300049581 Bacteria 7490
270 Ga0501048_0035302 3300049582 Bacteria 3600
271 Ga0501070_0165923 3300049586 Bacteria 1820
272 Ga0501072_0030414 3300049588 Bacteria 4223
273 Ga0501075_0069343 3300049591 Bacteria 2664
274 Ga0501076_0140302 3300049592 Bacteria 1963
275 Ga0501202_007913 3300049652 Unclassified 1929
276 Ga0501216_003147 3300049660 Unclassified 2389
277 Ga0501227_013588 3300049665 Unclassified 1795
278 Ga0501249_020618 3300049679 Unclassified 1434
279 Ga0501225_0002401 3300049705 Bacteria 5783
280 Ga0501079_0128144 3300049741 Bacteria 1974
281 Ga0501080_0232097 3300049742 Unclassified 1686
282 Ga0501035_0130105 3300049822 Bacteria 2195
283 Ga0501035_0160651 3300049822 Bacteria 1945
284 Ga0501035_0270280 3300049822 Bacteria 1439
285 Ga0501044_0029585 3300049823 Bacteria 5774
286 Ga0501045_0052026 3300049824 Bacteria 2989
287 Ga0501045_0072643 3300049824 Bacteria 2533
288 Ga0501212_001050 3300049851 Unclassified 2997
289 nmdc:mga09592_149144_c1 3300050508 Bacteria 2017
290 nmdc:mga0qj67_197437_c1 3300050509 Bacteria 1635
291 nmdc:mga06r32_107504_c1 3300050510 Bacteria 2742
292 nmdc:mga06r32_216124_c1 3300050510 Bacteria 1905
293 nmdc:mga0n895_30781_c1 3300050512 Bacteria 5132
294 Ga0495601_0280146 3300053077 Unclassified 1087
295 Ga0501082_0134772 3300060353 Bacteria 2143
296 Ga0530510_0034939 3300061734 Bacteria 3622
297 Ga0070671_100103104
298 Ga0070658_10001684
299 Ga0070658_10006841
300 Ga0070658_10010597
301 Ga0070658_10041139
302 Ga0070676_10077509
303 Ga0070683_100007401
304 Ga0070683_100028086
305 Ga0070683_100044338
306 Ga0070683_100089162
307 Ga0070683_100099695
308 Ga0070683_100200652
309 Ga0070683_100242607
310 Ga0070680_100040408
311 Ga0070680_100365010
312 Ga0068868_100087839
313 Ga0070660_100015760
314 Ga0070660_100196367
315 Ga0070687_100025210
316 Ga0070661_100011533
317 Ga0070661_100014758
318 Ga0070661_100071360
319 Ga0070661_100084199
320 Ga0070692_10014144
321 Ga0070668_100058999
322 Ga0070668_100328143
323 Ga0070669_100025604
324 Ga0070675_100094120
325 Ga0070674_100224969
326 Ga0070674_100282456
327 Ga0070673_100249068
328 Ga0070673_100317706
329 Ga0070688_100005628
330 Ga0070659_100009796
331 Ga0070659_100057310
332 Ga0070659_100281864
333 Ga0070703_10038093
334 Ga0070714_100014385
335 Ga0070714_100042820
336 Ga0070713_100012772
337 Ga0070694_100166430
338 Ga0070708_100021726
339 Ga0070708_100162032
340 Ga0070662_100025961
341 Ga0070662_100253756
342 Ga0070681_10000910
343 Ga0070681_10015910
344 Ga0070681_10038428
345 Ga0070681_10048655
346 Ga0070681_10059726
347 Ga0070681_10369957
348 Ga0068867_100005836
349 Ga0068867_100200858
350 Ga0070706_100001092
351 Ga0070707_100002168
352 Ga0070699_100115472
353 Ga0070699_100317939
354 Ga0070679_100003788
355 Ga0070679_100004797
356 Ga0070679_100005530
357 Ga0070679_100053356
358 Ga0070679_100225927
359 Ga0070679_100242304
360 Ga0070679_100426766
361 Ga0070679_100493360
362 Ga0070679_100505402
363 Ga0070679_100533838
364 Ga0070684_100006628
365 Ga0070684_100030288
366 Ga0070684_100063573
367 Ga0070697_100087072
368 Ga0070697_100116407
369 Ga0068853_100000831
370 Ga0068853_100110790
371 Ga0068853_100453267
372 Ga0070672_100019016
373 Ga0070672_100023088
374 Ga0070672_100060637
375 Ga0070672_100241391
376 Ga0070693_100042883
377 Ga0070693_100043322
378 Ga0070665_100068651
379 Ga0070704_100108282
380 Ga0068855_100007746
381 Ga0068855_100062914
382 Ga0068855_100135362
383 Ga0068855_100241386
384 Ga0070664_100001672
385 Ga0070664_100006199
386 Ga0070664_100136203
387 Ga0068854_100006143
388 Ga0070702_100020765
389 Ga0068852_100220929
390 Ga0068859_100097228
391 Ga0068863_100111863
392 Ga0070716_100170087
393 Ga0075430_100010414
394 Ga0075430_100072550
395 Ga0075431_100068655
396 Ga0075431_100161963
397 Ga0075434_100162099
398 Ga0075429_100185489
399 Ga0068865_100071816
400 Ga0097620_100097239
401 Ga0111539_10339896
402 Ga0105245_10013867
403 Ga0105245_10196702
404 Ga0105243_10111912
405 Ga0105248_10068355
406 Ga0105237_10211837
407 Ga0105238_10028028
408 Ga0105249_10000081
409 Ga0099796_10107252
410 Ga0157373_10048297
411 Ga0157373_10083725
412 Ga0157373_10197590
413 Ga0157371_10088915
414 Ga0157370_10000540
415 Ga0157370_10029370
416 Ga0157370_10245490
417 Ga0157369_10002739
418 Ga0157369_10086275
419 Ga0157369_10094437
420 Ga0157369_10226007
421 Ga0157378_10007117
422 Ga0157378_10027127
423 Ga0157378_10102218
424 Ga0157378_10160701
425 Ga0163162_10096149
426 Ga0157372_10001743
427 Ga0157372_10002145
428 Ga0157372_10007923
429 Ga0157372_10073740
430 Ga0157372_10185550
431 Ga0157375_10165516
432 Ga0157375_10326269
433 Ga0182008_10035420
434 Ga0157376_10098350
435 Ga0213876_10055292
436 Ga0207682_10003084
437 Ga0207643_10027760
438 Ga0207705_10002651
439 Ga0207705_10005180
440 Ga0207684_10000022
441 Ga0207707_10029128
442 Ga0207707_10050370
443 Ga0207707_10052885
444 Ga0207695_10009902
445 Ga0207657_10002151
446 Ga0207657_10052359
447 Ga0207649_10073123
448 Ga0207649_10083418
449 Ga0207649_10235192
450 Ga0207652_10014000
451 Ga0207652_10033855
452 Ga0207652_10251705
453 Ga0207646_10306754
454 Ga0207681_10013611
455 Ga0207687_10011107
456 Ga0207700_10113849
457 Ga0207664_10147655
458 Ga0207644_10118751
459 Ga0207690_10007736
460 Ga0207690_10036145
461 Ga0207706_10016610
462 Ga0207706_10156651
463 Ga0207709_10089531
464 Ga0207669_10011782
465 Ga0207704_10185427
466 Ga0207691_10015328
467 Ga0207691_10016949
468 Ga0207691_10098687
469 Ga0207711_10503601
470 Ga0207661_10043939
471 Ga0207661_10065663
472 Ga0207661_10131749
473 Ga0207661_10151827
474 Ga0207661_10345972
475 Ga0207679_10013224
476 Ga0207679_10125476
477 Ga0207667_10039129
478 Ga0207667_10134668
479 Ga0207667_10216678
480 Ga0207667_10294352
481 Ga0207651_10272599
482 Ga0207712_10000087
483 Ga0207668_10336727
484 Ga0207640_10041786
485 Ga0207658_10125290
486 Ga0207658_10262686
487 Ga0207677_10056444
488 Ga0207639_10009564
489 Ga0207678_10013392
490 Ga0207708_10005090
491 Ga0207708_10214228
492 Ga0207641_10078146
493 Ga0207648_10018268
494 Ga0207648_10045356
495 Ga0207674_10054962
496 Ga0207674_10063406
497 Ga0207675_100698492
498 Ga0207698_10009908
499 Ga0207698_10172825
500 Ga0207698_10363188
501 Ga0209998_10000749
502 Ga0307408_100007647
503 Ga0307408_100007866
504 Ga0307408_100163346
505 Ga0307405_10008916
506 Ga0307405_10012922
507 Ga0307413_10010068
508 Ga0307413_10027781
509 Ga0307413_10103604
510 Ga0307413_10138321
511 Ga0307406_10033709
512 Ga0307406_10127827
513 Ga0307406_10236109
514 Ga0307407_10034407
515 Ga0307412_10003888
516 Ga0307412_10052529
517 Ga0307409_100018466
518 Ga0307409_100048688
519 Ga0307409_100056675
520 Ga0307409_100098214
521 Ga0307409_100109177
522 Ga0307416_100012696
523 Ga0307416_100066894
524 Ga0307416_100089932
525 Ga0307416_100302953
526 Ga0307414_10023508
527 Ga0307414_10080993
528 Ga0307414_10082500
529 Ga0307411_10000515
530 Ga0307411_10008989
531 Ga0307411_10125178
532 Ga0373956_0011078
533 Ga0373957_0022392
534 Ga0436365_0170435
535 Ga0436365_0931492
536 Ga0436365_0998873
537 Ga0466967_0066240
538 Ga0495628_0089130
539 Ga0495628_0167744
540 Ga0495587_0001658
541 Ga0495621_0059171
542 Ga0495645_0000127
543 Ga0495623_0002198
544 Ga0495675_0192303
545 Ga0495684_0130526
546 Ga0495602_0107496
547 Ga0495602_0130441
548 Ga0495615_0013272
549 Ga0496100_0012599
550 Ga0496108_0276892
551 Ga0496111_0171914
552 Ga0496112_0192076
553 Ga0496113_0202103
554 Ga0496114_0047792
555 Ga0496115_0001640
556 Ga0501298_015886
557 Ga0501033_0009285
558 Ga0501036_0008351
559 Ga0501036_0040188
560 Ga0501039_0284332
561 Ga0501040_0024579
562 Ga0501042_0017016
563 Ga0501043_0049669
564 Ga0501047_0013067
565 Ga0501047_0014525
566 Ga0501048_0035302
567 Ga0501070_0165923
568 Ga0501072_0030414
569 Ga0501075_0069343
570 Ga0501076_0140302
571 Ga0501202_007913
572 Ga0501216_003147
573 Ga0501227_013588
574 Ga0501249_020618
575 Ga0501225_0002401
576 Ga0501079_0128144
577 Ga0501080_0232097
578 Ga0501035_0130105
579 Ga0501035_0160651
580 Ga0501035_0270280
581 Ga0501044_0029585
582 Ga0501045_0052026
583 Ga0501045_0072643
584 Ga0501212_001050
585 nmdc:mga09592_149144_c1
586 nmdc:mga0qj67_197437_c1
587 nmdc:mga06r32_107504_c1
588 nmdc:mga06r32_216124_c1
589 nmdc:mga0n895_30781_c1
590 Ga0495601_0280146
591 Ga0501082_0134772
592 Ga0530510_0034939

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01379

Porphobil_deam

Porphobilinogen deaminase, dipyromethane cofactor binding domain

23

232

0.97

PF03900

Porphobil_deamC

Porphobilinogen deaminase, C-terminal domain

243

314

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ypn-assembly1.cif.gz_A hydroxymethylbilane synthase 0.9645 6 311
1ypn-assembly1.cif.gz_A reduced form hydroxymethylbilane synthase (k59q mutant) crystal structure after 2 hours in a flow cell determined by time-resolved laue diffraction 0.9642 6 310
5h6o-assembly1.cif.gz_A porphobilinogen deaminase from vibrio cholerae 0.9639 7 307
1pda-assembly1.cif.gz_A structure of porphobilinogen deaminase reveals a flexible multidomain polymerase with a single catalytic site 0.9628 6 311
1ah5-assembly1.cif.gz_A reduced form selenomethionine-labelled hydroxymethylbilane synthase determined by mad 0.9602 6 311
ID Description Score Start End Superfamily
1ah5A02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9771 101 203 3.40.190.10
1ah5A02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9676 101 203 3.40.190.10
4htgA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9669 102 203 3.40.190.10
5h6oA03 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain 0.9546 225 307 3.30.160.40
af_O34090_221_303_3.30.160.40 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain 0.9535 226 309 3.30.160.40
ID Description Score Start End GO Terms
AF-A0A7W1EQ56-F1-model_v4 Hydroxymethylbilane synthase (EC 2.5.1.61) 0.9852 4 171 GO:0004418
GO:0005737
GO:0006783
AF-A0A838NPS6-F1-model_v4 Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) 0.9849 8 312 GO:0004418
GO:0005737
GO:0006782
AF-A0A377TL07-F1-model_v4 Hydroxymethylbilane synthase (EC 2.5.1.61) 0.983 98 237 GO:0004418
GO:0005737
GO:0006782
AF-A0A2V9CPE1-F1-model_v4 Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) 0.9808 6 249 GO:0004418
GO:0005737
GO:0006782
AF-A0A353PDS2-F1-model_v4 Hydroxymethylbilane synthase (EC 2.5.1.61) 0.9801 81 244 GO:0004418
GO:0005737
GO:0006782

Map