F392902

General Info

Members Datasets Scaffolds Average Seq Length
295 185 590 447

Family's Representative Sequence

Representative Sequence 3300053157|Ga0500624_001420|Ga0500624_001420_320_1777
Length 485
Sequence MPKHFPGSIPAYVFKITLNNKKITTEYTNYKYEKIINMKRKEFLKTGAIAAASFAILPSGSLFAGSNGKVRLGYIGVGARGMSHISEGCLRDDVEIIAICDTQERSLKICRDYMAQKGKPAAKEYTGGIDAYKGLLDRKDIDAVIIATPWQFHHPQAIDAMKAGKYVGCEVIAGLTVQDHWDIVNTSEKTGMPYMTLENVCYRRDVMAALNMVKQGLFGELVHVEGGYQHNLRNVLFNDGKHYAGGGVEFGPKALSEAQWRTQFNIDRDGDLYPTHGAGPVMHYIDINYGNRFTNLVAFSSKARGLAAYVEELAPGSPNAKINYKNGDVTQTMINCANGETVMLTHDTHLPRPYSLGFRIDGTKGIWMDVNSSLYIENSSKNDKWEPVKAWFEKYDHPLWKKYEKEASGAGHGGMDWFAFNAFIQSVKTKKQTPIDVYDSVTMSVIGPLSTKSLLEGNKPQEFPDFTKGKWKMRKNTFAVDDSGF

Samples

Sample ID Description Type Environment
1 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
62 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
63 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
67 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
70 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
75 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
106 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
107 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
108 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
109 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
112 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
116 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
117 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
118 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
126 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
127 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
128 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
129 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
130 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
131 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
132 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
133 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
134 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
135 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
136 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
137 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
138 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
143 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
144 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
145 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
146 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
152 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
153 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
154 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
155 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
159 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
160 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
161 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
162 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
163 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
164 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
165 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
166 2738541302 Pedobacter sp. CF074 Isolate Unclassified
167 2739367651 Pedobacter sp. OK291 Isolate Unclassified
168 2739367656 Pedobacter sp. CF523 Isolate Unclassified
169 2739367663 Pedobacter sp. YR510 Isolate Unclassified
170 2818991437 Pedobacter terrae 518 Isolate Unclassified
171 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
172 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
173 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
174 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
175 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
176 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
177 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
178 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
179 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
180 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
181 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
182 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
183 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
184 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
185 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.53
Metatranscriptomes 0.34
Isolates 8.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.86
Nodule 0
Rhizoplane 0.68
Rhizosphere 77.97
Stem 0
Stem Tuber 0
Unclassified 0.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500624_001420 3300053157 Bacteria 3927
2 JGI24736J21556_1002511 3300001904 Bacteria 3243
3 JGI24737J22298_10001660 3300001990 Bacteria 7937
4 JGI24735J21928_10000001 3300002067 Bacteria 650042
5 JGI24735J21928_10016502 3300002067 Bacteria 2290
6 JGI25162J39368_1000011 3300002737 Bacteria 379156
7 JGI25162J39368_1002545 3300002737 Bacteria 6958
8 JGI25150J39212_1000005 3300002774 Bacteria 311800
9 JGI25151J46595_10000004 3300003187 Bacteria 494006
10 JGI25165J46597_1000995 3300003214 Bacteria 18835
11 JGI25153J46596_10000004 3300003215 Bacteria 494006
12 rootH2_10001891 3300003320 Bacteria 464318
13 rootL2_10045401 3300003322 Bacteria 4767
14 rootH1_10035299 3300003323 Bacteria 54644
15 rootH1_10122845 3300003323 Bacteria 6312
16 rootH1_10122846 3300003323 Bacteria 2052
17 rootH1_10297653 3300003323 Bacteria 3786
18 Ga0055536_1000052 3300003781 Bacteria 111581
19 Ga0055530_10003907 3300003791 Bacteria 8113
20 Ga0058863_10022887 3300004799 Bacteria 2199
21 Ga0065714_10002200 3300005288 Bacteria 145275
22 Ga0065714_10014072 3300005288 Bacteria 3124
23 Ga0070676_10000149 3300005328 Bacteria 27649
24 Ga0070680_100049907 3300005336 Bacteria 3412
25 Ga0068868_100051188 3300005338 Bacteria 3247
26 Ga0070669_100101834 3300005353 Bacteria 2168
27 Ga0070671_100012591 3300005355 Bacteria 6814
28 Ga0070688_100121694 3300005365 Bacteria 1749
29 Ga0070659_100023255 3300005366 Bacteria 4740
30 Ga0070659_100040291 3300005366 Bacteria 3649
31 Ga0070663_100003009 3300005455 Bacteria 9623
32 Ga0070662_100000030 3300005457 Bacteria 81418
33 Ga0068867_100000502 3300005459 Bacteria 26058
34 Ga0070706_100212350 3300005467 Bacteria 1807
35 Ga0068853_100005410 3300005539 Bacteria 10004
36 Ga0068853_100100553 3300005539 Bacteria 2556
37 Ga0070686_100103852 3300005544 Bacteria 1924
38 Ga0070665_100000083 3300005548 Bacteria 181044
39 Ga0068855_100000280 3300005563 Bacteria 62945
40 Ga0068855_100003703 3300005563 Bacteria 18688
41 Ga0068855_100010476 3300005563 Bacteria 11185
42 Ga0068857_100021891 3300005577 Bacteria 5626
43 Ga0068857_100270317 3300005577 Bacteria 1562
44 Ga0068854_100125908 3300005578 Bacteria 1951
45 Ga0068856_100000204 3300005614 Bacteria 63335
46 Ga0068856_100007156 3300005614 Bacteria 10880
47 Ga0068856_100055918 3300005614 Bacteria 3894
48 Ga0068856_100065063 3300005614 Bacteria 3603
49 Ga0068856_100065193 3300005614 Bacteria 3599
50 Ga0068852_100001330 3300005616 Bacteria 16558
51 Ga0075366_10000197 3300006195 Bacteria 26552
52 Ga0075366_10000769 3300006195 Bacteria 15276
53 Ga0097621_100000093 3300006237 Bacteria 49437
54 Ga0068871_100000114 3300006358 Bacteria 49426
55 Ga0068865_100000334 3300006881 Bacteria 25991
56 Ga0105244_10013709 3300009036 Bacteria 4718
57 Ga0105240_10000104 3300009093 Bacteria 172082
58 Ga0105240_10000294 3300009093 Bacteria 97108
59 Ga0105240_10007294 3300009093 Bacteria 16097
60 Ga0105240_10013685 3300009093 Bacteria 11126
61 Ga0111539_10128135 3300009094 Unclassified 2973
62 Ga0111539_10283949 3300009094 Bacteria 1926
63 Ga0114129_10000054 3300009147 Bacteria 99951
64 Ga0105243_10000109 3300009148 Bacteria 94597
65 Ga0105241_10000611 3300009174 Bacteria 26865
66 Ga0105241_10001882 3300009174 Bacteria 15917
67 Ga0105241_10026266 3300009174 Bacteria 4331
68 Ga0105241_10118850 3300009174 Bacteria 2126
69 Ga0105248_10215708 3300009177 Bacteria 2161
70 Ga0105237_10001761 3300009545 Bacteria 28004
71 Ga0105237_10005553 3300009545 Bacteria 14222
72 Ga0105237_10005824 3300009545 Bacteria 13827
73 Ga0105237_10006402 3300009545 Bacteria 13067
74 Ga0105237_10010367 3300009545 Bacteria 9922
75 Ga0105237_10011005 3300009545 Bacteria 9603
76 Ga0105237_10022275 3300009545 Bacteria 6500
77 Ga0105238_10002537 3300009551 Bacteria 18245
78 Ga0105249_10014714 3300009553 Bacteria 6916
79 Ga0105239_10000006 3300010375 Bacteria 442319
80 Ga0105239_10000256 3300010375 Bacteria 79404
81 Ga0105239_10002457 3300010375 Bacteria 23603
82 Ga0105239_10006083 3300010375 Bacteria 14051
83 Ga0105239_10007148 3300010375 Bacteria 12844
84 Ga0105239_10007769 3300010375 Bacteria 12274
85 Ga0105239_10211104 3300010375 Bacteria 2176
86 Ga0105246_10110453 3300011119 Bacteria 2019
87 Ga0157371_10000129 3300013102 Bacteria 115362
88 Ga0157371_10002388 3300013102 Bacteria 17967
89 Ga0157371_10003393 3300013102 Bacteria 14471
90 Ga0157370_10052224 3300013104 Bacteria 3903
91 Ga0157370_10115387 3300013104 Bacteria 2509
92 Ga0157369_10000071 3300013105 Bacteria 140377
93 Ga0157369_10046334 3300013105 Bacteria 4725
94 Ga0157369_10107228 3300013105 Bacteria 2972
95 Ga0157374_10000203 3300013296 Bacteria 54699
96 Ga0157374_10000839 3300013296 Bacteria 26854
97 Ga0157378_10011356 3300013297 Bacteria 7795
98 Ga0157378_10079716 3300013297 Bacteria 2957
99 Ga0163162_10000467 3300013306 Bacteria 37494
100 Ga0163162_10009186 3300013306 Bacteria 9621
101 Ga0163162_10009969 3300013306 Bacteria 9241
102 Ga0157372_10000009 3300013307 Bacteria 302051
103 Ga0157372_10000735 3300013307 Bacteria 35709
104 Ga0157372_10008836 3300013307 Bacteria 10702
105 Ga0157372_10030088 3300013307 Bacteria 5936
106 Ga0157375_10013033 3300013308 Bacteria 7388
107 Ga0157375_10040367 3300013308 Bacteria 4498
108 Ga0157375_10097862 3300013308 Bacteria 3009
109 Ga0157380_10030936 3300014326 Unclassified 4105
110 Ga0182006_1000489 3300015261 Bacteria 31083
111 Ga0182006_1000602 3300015261 Bacteria 26160
112 Ga0182007_10000006 3300015262 Bacteria 427355
113 Ga0183373_1001 3300015682 Bacteria 1410374
114 Ga0163161_10000288 3300017792 Bacteria 44010
115 Ga0163161_10000477 3300017792 Bacteria 33196
116 Ga0163161_10003610 3300017792 Bacteria 10856
117 Ga0163161_10030316 3300017792 Bacteria 3848
118 Ga0207427_100113 3300025231 Bacteria 107320
119 Ga0209437_100010 3300025233 Bacteria 838447
120 Ga0209437_100017 3300025233 Bacteria 694471
121 Ga0207425_1000008 3300025245 Bacteria 618024
122 Ga0209026_1006518 3300025250 Bacteria 2835
123 Ga0209129_1000040 3300025258 Bacteria 313043
124 Ga0209233_1000017 3300025261 Bacteria 898076
125 Ga0209233_1001338 3300025261 Bacteria 9823
126 Ga0209233_1009572 3300025261 Bacteria 2943
127 Ga0209455_1002087 3300025272 Bacteria 7988
128 Ga0209676_1000090 3300025292 Bacteria 256336
129 Ga0209025_1000020 3300025294 Bacteria 618024
130 Ga0209758_1000022 3300025297 Bacteria 618024
131 Ga0209050_1000091 3300025298 Bacteria 253049
132 Ga0207647_10000247 3300025904 Bacteria 44109
133 Ga0207647_10001849 3300025904 Bacteria 16235
134 Ga0207645_10000505 3300025907 Bacteria 32275
135 Ga0207705_10000132 3300025909 Bacteria 81270
136 Ga0207654_10001732 3300025911 Bacteria 11345
137 Ga0207654_10009145 3300025911 Bacteria 5024
138 Ga0207654_10173859 3300025911 Bacteria 1401
139 Ga0207695_10000048 3300025913 Bacteria 421800
140 Ga0207695_10000142 3300025913 Bacteria 214715
141 Ga0207695_10006881 3300025913 Bacteria 14634
142 Ga0207695_10053963 3300025913 Bacteria 4200
143 Ga0207695_10098173 3300025913 Bacteria 2928
144 Ga0207671_10000300 3300025914 Bacteria 73008
145 Ga0207671_10001892 3300025914 Bacteria 23269
146 Ga0207671_10002578 3300025914 Bacteria 19151
147 Ga0207671_10004306 3300025914 Bacteria 13683
148 Ga0207671_10006243 3300025914 Bacteria 10680
149 Ga0207671_10013640 3300025914 Bacteria 6460
150 Ga0207660_10019711 3300025917 Bacteria 4514
151 Ga0207694_10007154 3300025924 Bacteria 8480
152 Ga0207644_10018667 3300025931 Bacteria 4694
153 Ga0207690_10011146 3300025932 Bacteria 5365
154 Ga0207706_10000129 3300025933 Bacteria 81280
155 Ga0207709_10000072 3300025935 Bacteria 178084
156 Ga0207670_10097762 3300025936 Bacteria 2090
157 Ga0207704_10000074 3300025938 Bacteria 61994
158 Ga0207711_10161107 3300025941 Bacteria 2031
159 Ga0207667_10000349 3300025949 Bacteria 62960
160 Ga0207667_10000621 3300025949 Bacteria 45894
161 Ga0207667_10005676 3300025949 Bacteria 15213
162 Ga0207667_10006836 3300025949 Bacteria 13783
163 Ga0207667_10022130 3300025949 Bacteria 7032
164 Ga0207651_10003131 3300025960 Bacteria 8057
165 Ga0207640_10065535 3300025981 Bacteria 2424
166 Ga0207677_10058394 3300026023 Bacteria 2656
167 Ga0207639_10037904 3300026041 Bacteria 3583
168 Ga0207639_10081307 3300026041 Bacteria 2566
169 Ga0207639_10084479 3300026041 Bacteria 2522
170 Ga0207678_10003776 3300026067 Bacteria 13616
171 Ga0207702_10002255 3300026078 Bacteria 18481
172 Ga0207702_10009624 3300026078 Bacteria 8111
173 Ga0207702_10034609 3300026078 Bacteria 4224
174 Ga0207702_10102072 3300026078 Bacteria 2534
175 Ga0207648_10001028 3300026089 Bacteria 31400
176 Ga0207674_10242609 3300026116 Bacteria 1749
177 Ga0207698_10001597 3300026142 Bacteria 13196
178 Ga0268266_10000095 3300028379 Bacteria 186169
179 Ga0307517_10001156 3300028786 Bacteria 44560
180 Ga0307517_10002592 3300028786 Bacteria 28790
181 Ga0307517_10012121 3300028786 Bacteria 11874
182 Ga0307515_10000114 3300028794 Bacteria 194024
183 Ga0307515_10010404 3300028794 Bacteria 17822
184 Ga0307515_10173047 3300028794 Bacteria 2142
185 Ga0265338_10045382 3300028800 Bacteria 4042
186 Ga0316176_1046024 3300030732 Bacteria 10598
187 Ga0316183_1108470 3300030742 Bacteria 14315
188 Ga0316181_1038863 3300030744 Bacteria 7420
189 Ga0307509_10185254 3300031507 Bacteria 1940
190 Ga0316578_10034136 3300031728 Bacteria 2919
191 Ga0307405_10000012 3300031731 Bacteria 233774
192 Ga0316577_10000186 3300031733 Bacteria 20417
193 Ga0316577_10000341 3300031733 Bacteria 17356
194 Ga0307407_10000038 3300031903 Bacteria 68710
195 Ga0307412_10025921 3300031911 Bacteria 3638
196 Ga0307416_100000007 3300032002 Bacteria 433284
197 Ga0316580_10016851 3300032139 Bacteria 2244
198 Ga0307510_10011931 3300033180 Bacteria 10303
199 Ga0307510_10050403 3300033180 Bacteria 4417
200 Ga0316582_0033130 3300036647 Bacteria 3171
201 Ga0316584_0166361 3300036712 Bacteria 1637
202 Ga0395899_0000002 3300037312 Bacteria 1324310
203 Ga0395899_0000220 3300037312 Bacteria 78900
204 Ga0395899_0000817 3300037312 Bacteria 30278
205 Ga0395900_0000609 3300037418 Bacteria 48753
206 Ga0395900_0026937 3300037418 Bacteria 5883
207 Ga0395898_0027982 3300037466 Bacteria 5653
208 Ga0395905_0006263 3300037471 Bacteria 12008
209 Ga0395905_0014877 3300037471 Bacteria 7423
210 Ga0316581_0009990 3300037588 Bacteria 2621
211 Ga0395901_0065797 3300038443 Bacteria 3775
212 Ga0436361_0027069 3300039447 Bacteria 9468
213 Ga0466966_0031778 3300044684 Bacteria 3423
214 Ga0466961_0023050 3300044693 Bacteria 4004
215 Ga0466959_0083093 3300045049 Bacteria 2307
216 Ga0495650_0000216 3300046471 Bacteria 121086
217 Ga0495650_0036655 3300046471 Bacteria 2143
218 Ga0495585_0000103 3300046492 Bacteria 90447
219 Ga0495585_0000156 3300046492 Bacteria 72941
220 Ga0495583_0013706 3300046506 Bacteria 4503
221 Ga0495606_0000263 3300046507 Bacteria 92794
222 Ga0495606_0059369 3300046507 Bacteria 2454
223 Ga0495606_0103645 3300046507 Bacteria 1727
224 Ga0495610_0001120 3300046512 Bacteria 24436
225 Ga0495610_0005832 3300046512 Bacteria 8654
226 Ga0495616_0002150 3300046513 Bacteria 13182
227 Ga0495637_0041096 3300046520 Bacteria 1986
228 Ga0495644_0020899 3300046523 Bacteria 2497
229 Ga0495648_0009558 3300046524 Bacteria 7485
230 Ga0495652_0088440 3300046529 Bacteria 2539
231 Ga0495633_0000044 3300046558 Bacteria 171185
232 Ga0495633_0023613 3300046558 Bacteria 3045
233 Ga0495668_0000012 3300046616 Bacteria 458817
234 Ga0495625_0000125 3300046660 Bacteria 120726
235 Ga0495625_0001792 3300046660 Bacteria 24676
236 Ga0495625_0002398 3300046660 Bacteria 20329
237 Ga0495625_0021656 3300046660 Bacteria 4945
238 Ga0495625_0032897 3300046660 Bacteria 3839
239 Ga0495661_0000924 3300046665 Bacteria 26810
240 Ga0495661_0008656 3300046665 Bacteria 7032
241 Ga0495649_0000044 3300046694 Bacteria 120721
242 Ga0495649_0090450 3300046694 Bacteria 1632
243 Ga0495660_0007395 3300046810 Bacteria 6449
244 Ga0495687_002598 3300047443 Bacteria 14201
245 Ga0495687_022751 3300047443 Bacteria 3004
246 Ga0495687_034872 3300047443 Bacteria 2268
247 Ga0495681_0081530 3300047470 Bacteria 1443
248 Ga0495686_0000718 3300047472 Bacteria 44415
249 Ga0495686_0038953 3300047472 Bacteria 3039
250 Ga0496102_0042167 3300048905 Bacteria 4135
251 Ga0496123_0036174 3300048926 Bacteria 3506
252 Ga0501048_0133806 3300049582 Bacteria 1751
253 Ga0501067_0031018 3300049583 Bacteria 2966
254 Ga0501067_0073538 3300049583 Bacteria 1894
255 Ga0501249_002574 3300049679 Bacteria 3654
256 nmdc:mga0k408_152_c1 3300050493 Bacteria 35351
257 nmdc:mga0k408_55_c2 3300050493 Bacteria 31438
258 nmdc:mga06z11_12450_c1 3300050494 Bacteria 3700
259 nmdc:mga07m45_21530_c1 3300050496 Bacteria 3511
260 nmdc:mga05p37_11_c1 3300050507 Bacteria 149577
261 nmdc:mga08y16_183161_c1 3300050511 Bacteria 2174
262 nmdc:mga08y16_191963_c1 3300050511 Bacteria 2118
263 nmdc:mga08y16_40246_c1 3300050511 Bacteria 4900
264 nmdc:mga08y16_67993_c1 3300050511 Bacteria 3716
265 Ga0500635_0000741 3300053080 Bacteria 8165
266 Ga0500608_000526 3300053122 Bacteria 14299
267 Ga0500614_007458 3300053123 Bacteria 2307
268 Ga0500618_000001 3300053125 Bacteria 538477
269 Ga0500622_0000017 3300053156 Bacteria 332114
270 Ga0500622_0004587 3300053156 Bacteria 8604
271 Ga0500624_000163 3300053157 Bacteria 27034
272 2586208540 2585427687 Bacteria 5544917
273 2586209147 2585427687 Bacteria 5544917
274 2599477211 2599185184 Bacteria 6430550
275 2722730291 2721755487 Bacteria 6357185
276 2738853049 2738541302 Bacteria 5944758
277 2739586429 2739367651 Bacteria 6359826
278 2739617349 2739367656 Bacteria 5152243
279 2739647062 2739367663 Bacteria 5040914
280 2819549075 2818991437 Bacteria 5805520
281 2842725683 2842722452 Bacteria 6263924
282 2842909630 2842903701 Bacteria 6986368
283 2842914383 2842909656 Bacteria 6185908
284 2849282888 2849281842 Bacteria 6065644
285 2857629494 2857627736 Bacteria 5625397
286 2902050069 2902048731 Bacteria 4976191
287 2904447358 2904445276 Bacteria 5310396
288 2904783922 2904780799 Bacteria 5840761
289 2919181860 2919177583 Bacteria 5641607
290 2919440834 2919437846 Bacteria 6199444
291 2928079126 2928078545 Bacteria 6534839
292 2928148505 2928147474 Bacteria 6512076
293 2932085801 2932082852 Bacteria 6563563
294 2946001204 2945997725 Bacteria 6404843
295 2954018106 2954016120 Bacteria 6446024
296 Ga0500624_001420
297 JGI24736J21556_1002511
298 JGI24737J22298_10001660
299 JGI24735J21928_10000001
300 JGI24735J21928_10016502
301 JGI25162J39368_1000011
302 JGI25162J39368_1002545
303 JGI25150J39212_1000005
304 JGI25151J46595_10000004
305 JGI25165J46597_1000995
306 JGI25153J46596_10000004
307 rootH2_10001891
308 rootL2_10045401
309 rootH1_10035299
310 rootH1_10122845
311 rootH1_10122846
312 rootH1_10297653
313 Ga0055536_1000052
314 Ga0055530_10003907
315 Ga0058863_10022887
316 Ga0065714_10002200
317 Ga0065714_10014072
318 Ga0070676_10000149
319 Ga0070680_100049907
320 Ga0068868_100051188
321 Ga0070669_100101834
322 Ga0070671_100012591
323 Ga0070688_100121694
324 Ga0070659_100023255
325 Ga0070659_100040291
326 Ga0070663_100003009
327 Ga0070662_100000030
328 Ga0068867_100000502
329 Ga0070706_100212350
330 Ga0068853_100005410
331 Ga0068853_100100553
332 Ga0070686_100103852
333 Ga0070665_100000083
334 Ga0068855_100000280
335 Ga0068855_100003703
336 Ga0068855_100010476
337 Ga0068857_100021891
338 Ga0068857_100270317
339 Ga0068854_100125908
340 Ga0068856_100000204
341 Ga0068856_100007156
342 Ga0068856_100055918
343 Ga0068856_100065063
344 Ga0068856_100065193
345 Ga0068852_100001330
346 Ga0075366_10000197
347 Ga0075366_10000769
348 Ga0097621_100000093
349 Ga0068871_100000114
350 Ga0068865_100000334
351 Ga0105244_10013709
352 Ga0105240_10000104
353 Ga0105240_10000294
354 Ga0105240_10007294
355 Ga0105240_10013685
356 Ga0111539_10128135
357 Ga0111539_10283949
358 Ga0114129_10000054
359 Ga0105243_10000109
360 Ga0105241_10000611
361 Ga0105241_10001882
362 Ga0105241_10026266
363 Ga0105241_10118850
364 Ga0105248_10215708
365 Ga0105237_10001761
366 Ga0105237_10005553
367 Ga0105237_10005824
368 Ga0105237_10006402
369 Ga0105237_10010367
370 Ga0105237_10011005
371 Ga0105237_10022275
372 Ga0105238_10002537
373 Ga0105249_10014714
374 Ga0105239_10000006
375 Ga0105239_10000256
376 Ga0105239_10002457
377 Ga0105239_10006083
378 Ga0105239_10007148
379 Ga0105239_10007769
380 Ga0105239_10211104
381 Ga0105246_10110453
382 Ga0157371_10000129
383 Ga0157371_10002388
384 Ga0157371_10003393
385 Ga0157370_10052224
386 Ga0157370_10115387
387 Ga0157369_10000071
388 Ga0157369_10046334
389 Ga0157369_10107228
390 Ga0157374_10000203
391 Ga0157374_10000839
392 Ga0157378_10011356
393 Ga0157378_10079716
394 Ga0163162_10000467
395 Ga0163162_10009186
396 Ga0163162_10009969
397 Ga0157372_10000009
398 Ga0157372_10000735
399 Ga0157372_10008836
400 Ga0157372_10030088
401 Ga0157375_10013033
402 Ga0157375_10040367
403 Ga0157375_10097862
404 Ga0157380_10030936
405 Ga0182006_1000489
406 Ga0182006_1000602
407 Ga0182007_10000006
408 Ga0183373_1001
409 Ga0163161_10000288
410 Ga0163161_10000477
411 Ga0163161_10003610
412 Ga0163161_10030316
413 Ga0207427_100113
414 Ga0209437_100010
415 Ga0209437_100017
416 Ga0207425_1000008
417 Ga0209026_1006518
418 Ga0209129_1000040
419 Ga0209233_1000017
420 Ga0209233_1001338
421 Ga0209233_1009572
422 Ga0209455_1002087
423 Ga0209676_1000090
424 Ga0209025_1000020
425 Ga0209758_1000022
426 Ga0209050_1000091
427 Ga0207647_10000247
428 Ga0207647_10001849
429 Ga0207645_10000505
430 Ga0207705_10000132
431 Ga0207654_10001732
432 Ga0207654_10009145
433 Ga0207654_10173859
434 Ga0207695_10000048
435 Ga0207695_10000142
436 Ga0207695_10006881
437 Ga0207695_10053963
438 Ga0207695_10098173
439 Ga0207671_10000300
440 Ga0207671_10001892
441 Ga0207671_10002578
442 Ga0207671_10004306
443 Ga0207671_10006243
444 Ga0207671_10013640
445 Ga0207660_10019711
446 Ga0207694_10007154
447 Ga0207644_10018667
448 Ga0207690_10011146
449 Ga0207706_10000129
450 Ga0207709_10000072
451 Ga0207670_10097762
452 Ga0207704_10000074
453 Ga0207711_10161107
454 Ga0207667_10000349
455 Ga0207667_10000621
456 Ga0207667_10005676
457 Ga0207667_10006836
458 Ga0207667_10022130
459 Ga0207651_10003131
460 Ga0207640_10065535
461 Ga0207677_10058394
462 Ga0207639_10037904
463 Ga0207639_10081307
464 Ga0207639_10084479
465 Ga0207678_10003776
466 Ga0207702_10002255
467 Ga0207702_10009624
468 Ga0207702_10034609
469 Ga0207702_10102072
470 Ga0207648_10001028
471 Ga0207674_10242609
472 Ga0207698_10001597
473 Ga0268266_10000095
474 Ga0307517_10001156
475 Ga0307517_10002592
476 Ga0307517_10012121
477 Ga0307515_10000114
478 Ga0307515_10010404
479 Ga0307515_10173047
480 Ga0265338_10045382
481 Ga0316176_1046024
482 Ga0316183_1108470
483 Ga0316181_1038863
484 Ga0307509_10185254
485 Ga0316578_10034136
486 Ga0307405_10000012
487 Ga0316577_10000186
488 Ga0316577_10000341
489 Ga0307407_10000038
490 Ga0307412_10025921
491 Ga0307416_100000007
492 Ga0316580_10016851
493 Ga0307510_10011931
494 Ga0307510_10050403
495 Ga0316582_0033130
496 Ga0316584_0166361
497 Ga0395899_0000002
498 Ga0395899_0000220
499 Ga0395899_0000817
500 Ga0395900_0000609
501 Ga0395900_0026937
502 Ga0395898_0027982
503 Ga0395905_0006263
504 Ga0395905_0014877
505 Ga0316581_0009990
506 Ga0395901_0065797
507 Ga0436361_0027069
508 Ga0466966_0031778
509 Ga0466961_0023050
510 Ga0466959_0083093
511 Ga0495650_0000216
512 Ga0495650_0036655
513 Ga0495585_0000103
514 Ga0495585_0000156
515 Ga0495583_0013706
516 Ga0495606_0000263
517 Ga0495606_0059369
518 Ga0495606_0103645
519 Ga0495610_0001120
520 Ga0495610_0005832
521 Ga0495616_0002150
522 Ga0495637_0041096
523 Ga0495644_0020899
524 Ga0495648_0009558
525 Ga0495652_0088440
526 Ga0495633_0000044
527 Ga0495633_0023613
528 Ga0495668_0000012
529 Ga0495625_0000125
530 Ga0495625_0001792
531 Ga0495625_0002398
532 Ga0495625_0021656
533 Ga0495625_0032897
534 Ga0495661_0000924
535 Ga0495661_0008656
536 Ga0495649_0000044
537 Ga0495649_0090450
538 Ga0495660_0007395
539 Ga0495687_002598
540 Ga0495687_022751
541 Ga0495687_034872
542 Ga0495681_0081530
543 Ga0495686_0000718
544 Ga0495686_0038953
545 Ga0496102_0042167
546 Ga0496123_0036174
547 Ga0501048_0133806
548 Ga0501067_0031018
549 Ga0501067_0073538
550 Ga0501249_002574
551 nmdc:mga0k408_152_c1
552 nmdc:mga0k408_55_c2
553 nmdc:mga06z11_12450_c1
554 nmdc:mga07m45_21530_c1
555 nmdc:mga05p37_11_c1
556 nmdc:mga08y16_183161_c1
557 nmdc:mga08y16_191963_c1
558 nmdc:mga08y16_40246_c1
559 nmdc:mga08y16_67993_c1
560 Ga0500635_0000741
561 Ga0500608_000526
562 Ga0500614_007458
563 Ga0500618_000001
564 Ga0500622_0000017
565 Ga0500622_0004587
566 Ga0500624_000163
567 2586208540
568 2586209147
569 2599477211
570 2722730291
571 2738853049
572 2739586429
573 2739617349
574 2739647062
575 2819549075
576 2842725683
577 2842909630
578 2842914383
579 2849282888
580 2857629494
581 2902050069
582 2904447358
583 2904783922
584 2919181860
585 2919440834
586 2928079126
587 2928148505
588 2932085801
589 2946001204
590 2954018106

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21252

Glyco_hydro_109_C

Glycosyl hydrolase 109, C-terminal domain

207

388

0.97

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

70

197

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ixa-assembly1.cif.gz_A a-zyme, n-acetylgalactosaminidase 0.9604 32 446
2ixa-assembly1.cif.gz_A a-zyme, n-acetylgalactosaminidase 0.934 32 446
6t2b-assembly2.cif.gz_D glycoside hydrolase family 109 from akkermansia muciniphila in complex with galnac and nad+. 0.9146 27 440
6t2b-assembly1.cif.gz_C glycoside hydrolase family 109 from akkermansia muciniphila in complex with galnac and nad+. 0.9084 27 440
6t2b-assembly2.cif.gz_D glycoside hydrolase family 109 from akkermansia muciniphila in complex with galnac and nad+. 0.8522 27 440
ID Description Score Start End Superfamily
2ixaA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9251 163 447 3.30.360.10
2ixaA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9111 163 447 3.30.360.10
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8901 32 157 3.40.50.720
2ixbA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8858 32 182 3.40.50.720
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8689 32 157 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A257WA22-F1-model_v4 Acetylgalactosaminidase 0.9342 27 175 GO:0000166
GO:0016787
AF-A0A355KVJ5-F1-model_v4 Glycosyl hydrolase 0.9148 30 332 GO:0000166
GO:0016798
AF-A0A355KVJ5-F1-model_v4 Glycosyl hydrolase 0.9026 30 332 GO:0000166
GO:0016798
AF-A0A553FRG6-F1-model_v4 Acetylgalactosaminidase 0.8943 27 448 GO:0000166
GO:0016798
AF-A0A257WA22-F1-model_v4 Acetylgalactosaminidase 0.8938 27 175 GO:0000166
GO:0016787

Map