F392685

General Info

Members Datasets Scaffolds Average Seq Length
295 186 590 478

Family's Representative Sequence

Representative Sequence 3300025933|Ga0207706_10024352|Ga0207706_100243525
Length 550
Sequence MTTFASHLVQEALERAGLLVEVRGRLPGQLTGITDDSRQVTPGALFVAVRGTARDGHDFLAAIADRAGATIVEDASRTNLPSFVVRDARRAAPIAAAAAYGEPGAKLRLVGVTGTNGKTTTVGILRHLLDEDRAGRSASIGTLGVLVGSEGTAQQGGGGLTTPGPIELQRVLRALVDAGVTSVAMEVSSHSLDQRRVDGLEFAAAVFTNLTRDHLDYHGTMEAYVAAKARLIDYLAPEGAAVVNADDDAWKVLARVPRQVHFSLVGHDADMCASDVRYTPRGSEWTLEAGGAASAVRLPLVGDFNVANALGAAAAAWALGLSVDVIAQRLSTLPQVPGRLERVYERPTVLRDYAHTPDALERALLAVRPFAERRLIVVFGCGGDRDRGKRPVMGGIAERLADLAIVTSDNPRTEDPDRIIDDIEAGMHGANHERITDRHDAIALMSFMTEDCVFEASGGPEICGMRYVGRDAVRAGYAEVWSTFPDAHWNNARHFVEGERGVSEWTFTGTRTDGSRVEVNGCDLFTFREGKIAVKNSYRKNRPPLPAQSG

Samples

Sample ID Description Type Environment
1 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
3 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
78 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
126 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
127 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
128 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
129 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
130 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
131 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
132 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
133 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
134 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
135 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
136 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
137 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
138 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
139 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
140 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
141 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
142 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
143 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
144 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
145 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
146 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
152 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
153 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
159 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
166 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
178 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
181 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
182 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
183 2718217752 Candidatus Xiphinematobacter sp. Idaho Grape Isolate Unclassified
184 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
185 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
186 2965119406 Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.63
Metatranscriptomes 0
Isolates 2.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.37
Nodule 0.68
Rhizoplane 5.08
Rhizosphere 89.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207706_10024352 3300025933 Bacteria 5427
2 Ga0055526_1003506 3300003771 Bacteria 9921
3 Ga0055528_1001199 3300003790 Bacteria 16717
4 Ga0070658_10023004 3300005327 Bacteria 5003
5 Ga0070676_10000654 3300005328 Bacteria 16862
6 Ga0070683_100009132 3300005329 Bacteria 8463
7 Ga0070683_100028895 3300005329 Bacteria 5015
8 Ga0070683_100029534 3300005329 Bacteria 4964
9 Ga0070683_100033171 3300005329 Bacteria 4706
10 Ga0070690_100043479 3300005330 Bacteria 2849
11 Ga0070670_100015138 3300005331 Bacteria 6619
12 Ga0070670_100016832 3300005331 Bacteria 6274
13 Ga0068869_100004132 3300005334 Bacteria 9003
14 Ga0068869_100013935 3300005334 Bacteria 5361
15 Ga0068868_100042515 3300005338 Bacteria 3547
16 Ga0070661_100002291 3300005344 Bacteria 13146
17 Ga0070661_100034880 3300005344 Bacteria 3651
18 Ga0070668_100005628 3300005347 Bacteria 9290
19 Ga0070669_100007561 3300005353 Bacteria 7781
20 Ga0070669_100024790 3300005353 Bacteria 4304
21 Ga0070675_100011176 3300005354 Bacteria 7025
22 Ga0070675_100111848 3300005354 Bacteria 2312
23 Ga0070671_100000523 3300005355 Bacteria 26929
24 Ga0070674_100000268 3300005356 Bacteria 25694
25 Ga0070674_100009839 3300005356 Bacteria 5749
26 Ga0070673_100023282 3300005364 Bacteria 4524
27 Ga0070673_100061991 3300005364 Bacteria 2969
28 Ga0070688_100025838 3300005365 Bacteria 3481
29 Ga0070659_100045343 3300005366 Bacteria 3444
30 Ga0070705_100001084 3300005440 Bacteria 15117
31 Ga0070705_100001902 3300005440 Bacteria 10729
32 Ga0070708_100014216 3300005445 Bacteria 6541
33 Ga0070663_100031142 3300005455 Bacteria 3664
34 Ga0070678_100003283 3300005456 Bacteria 8991
35 Ga0070662_100000244 3300005457 Bacteria 32101
36 Ga0070662_100001142 3300005457 Bacteria 16271
37 Ga0070681_10002790 3300005458 Bacteria 16132
38 Ga0068867_100001001 3300005459 Bacteria 19280
39 Ga0068867_100081820 3300005459 Bacteria 2435
40 Ga0070707_100000487 3300005468 Bacteria 39284
41 Ga0070707_100067962 3300005468 Bacteria 3429
42 Ga0070698_100003375 3300005471 Bacteria 17573
43 Ga0070698_100055515 3300005471 Bacteria 4016
44 Ga0070684_100010924 3300005535 Bacteria 7215
45 Ga0070697_100023283 3300005536 Bacteria 4926
46 Ga0070672_100024641 3300005543 Bacteria 4450
47 Ga0070672_100044702 3300005543 Bacteria 3422
48 Ga0070695_100006603 3300005545 Bacteria 6855
49 Ga0070695_100031489 3300005545 Bacteria 3310
50 Ga0070696_100024056 3300005546 Bacteria 4141
51 Ga0070696_100036900 3300005546 Bacteria 3372
52 Ga0070665_100050995 3300005548 Bacteria 4152
53 Ga0070665_100073457 3300005548 Bacteria 3426
54 Ga0070704_100052753 3300005549 Bacteria 2871
55 Ga0070664_100003056 3300005564 Bacteria 13531
56 Ga0070664_100024339 3300005564 Bacteria 5007
57 Ga0068857_100002829 3300005577 Bacteria 14265
58 Ga0068857_100021291 3300005577 Bacteria 5708
59 Ga0068857_100058882 3300005577 Bacteria 3411
60 Ga0068854_100137055 3300005578 Bacteria 1874
61 Ga0070702_100005726 3300005615 Bacteria 5818
62 Ga0068852_100024115 3300005616 Bacteria 4911
63 Ga0068852_100084360 3300005616 Bacteria 2827
64 Ga0068864_100001335 3300005618 Bacteria 20527
65 Ga0068864_100048499 3300005618 Bacteria 3651
66 Ga0068866_10000139 3300005718 Bacteria 32527
67 Ga0068861_100002627 3300005719 Bacteria 11743
68 Ga0068861_100002776 3300005719 Bacteria 11493
69 Ga0068861_100072222 3300005719 Bacteria 2677
70 Ga0068858_100016717 3300005842 Bacteria 6889
71 Ga0068860_100168929 3300005843 Bacteria 2112
72 Ga0068862_100000428 3300005844 Bacteria 45697
73 Ga0081455_10000028 3300005937 Bacteria 155778
74 Ga0081455_10001275 3300005937 Bacteria 31421
75 Ga0070712_100124609 3300006175 Bacteria 1944
76 Ga0097621_100012908 3300006237 Bacteria 6209
77 Ga0075428_100028309 3300006844 Bacteria 6197
78 Ga0075430_100001257 3300006846 Bacteria 20433
79 Ga0075430_100003872 3300006846 Bacteria 12603
80 Ga0075430_100021645 3300006846 Bacteria 5464
81 Ga0075430_100024621 3300006846 Bacteria 5121
82 Ga0075431_100001858 3300006847 Bacteria 20004
83 Ga0075431_100008393 3300006847 Bacteria 10338
84 Ga0075431_100024036 3300006847 Bacteria 6240
85 Ga0075431_100144875 3300006847 Bacteria 2448
86 Ga0075433_10081957 3300006852 Bacteria 2845
87 Ga0075434_100021655 3300006871 Bacteria 6251
88 Ga0075434_100032123 3300006871 Bacteria 5176
89 Ga0075434_100071573 3300006871 Bacteria 3459
90 Ga0075434_100148775 3300006871 Bacteria 2361
91 Ga0075429_100038096 3300006880 Bacteria 4185
92 Ga0075429_100063270 3300006880 Bacteria 3224
93 Ga0105240_10084406 3300009093 Bacteria 3894
94 Ga0111539_10014790 3300009094 Bacteria 9733
95 Ga0111539_10033007 3300009094 Bacteria 6285
96 Ga0105245_10056534 3300009098 Bacteria 3527
97 Ga0105245_10070343 3300009098 Bacteria 3175
98 Ga0114129_10017700 3300009147 Bacteria 10146
99 Ga0114129_10018923 3300009147 Bacteria 9813
100 Ga0105243_10014400 3300009148 Bacteria 5987
101 Ga0105241_10022851 3300009174 Bacteria 4635
102 Ga0105242_10003599 3300009176 Bacteria 12052
103 Ga0105248_10006813 3300009177 Bacteria 12524
104 Ga0105248_10022651 3300009177 Bacteria 6972
105 Ga0105248_10025169 3300009177 Bacteria 6615
106 Ga0105248_10062000 3300009177 Bacteria 4199
107 Ga0105249_10001389 3300009553 Bacteria 21193
108 Ga0105249_10009463 3300009553 Bacteria 8532
109 Ga0105249_10018670 3300009553 Bacteria 6175
110 Ga0105249_10055604 3300009553 Bacteria 3621
111 Ga0105249_10088082 3300009553 Bacteria 2899
112 Ga0105239_10011403 3300010375 Bacteria 9914
113 Ga0105239_10014177 3300010375 Bacteria 8844
114 Ga0105239_10062940 3300010375 Bacteria 4072
115 Ga0157371_10002384 3300013102 Bacteria 17978
116 Ga0157370_10069680 3300013104 Bacteria 3321
117 Ga0157369_10012517 3300013105 Bacteria 9624
118 Ga0157369_10014860 3300013105 Bacteria 8787
119 Ga0163162_10002928 3300013306 Bacteria 16284
120 Ga0157372_10005362 3300013307 Bacteria 13623
121 Ga0157372_10009902 3300013307 Bacteria 10139
122 Ga0157372_10241333 3300013307 Bacteria 2097
123 Ga0157375_10190418 3300013308 Bacteria 2206
124 Ga0163163_10044622 3300014325 Bacteria 4349
125 Ga0157380_10012805 3300014326 Bacteria 6094
126 Ga0157380_10025355 3300014326 Bacteria 4497
127 Ga0157377_10002699 3300014745 Bacteria 7889
128 Ga0157377_10006764 3300014745 Bacteria 5492
129 Ga0157379_10031196 3300014968 Bacteria 4747
130 Ga0163161_10081152 3300017792 Bacteria 2388
131 Ga0213871_10002591 3300021441 Bacteria 3346
132 Ga0209673_1000117 3300025273 Bacteria 172081
133 Ga0209564_1001780 3300025295 Bacteria 19956
134 Ga0209256_1005804 3300025299 Bacteria 6883
135 Ga0207697_10001428 3300025315 Bacteria 13066
136 Ga0207653_10013445 3300025885 Bacteria 2563
137 Ga0207642_10000910 3300025899 Bacteria 9275
138 Ga0207642_10011530 3300025899 Bacteria 3158
139 Ga0207688_10020938 3300025901 Bacteria 3570
140 Ga0207645_10000567 3300025907 Bacteria 30604
141 Ga0207645_10001391 3300025907 Bacteria 19860
142 Ga0207643_10003803 3300025908 Bacteria 8115
143 Ga0207705_10027603 3300025909 Bacteria 4048
144 Ga0207654_10026149 3300025911 Bacteria 3157
145 Ga0207707_10014047 3300025912 Bacteria 6980
146 Ga0207695_10005414 3300025913 Bacteria 16939
147 Ga0207695_10071163 3300025913 Bacteria 3552
148 Ga0207693_10114794 3300025915 Bacteria 2114
149 Ga0207662_10000481 3300025918 Bacteria 17893
150 Ga0207657_10007521 3300025919 Bacteria 11165
151 Ga0207657_10026425 3300025919 Bacteria 5337
152 Ga0207649_10003143 3300025920 Bacteria 9055
153 Ga0207649_10026729 3300025920 Bacteria 3379
154 Ga0207649_10030899 3300025920 Bacteria 3177
155 Ga0207652_10007581 3300025921 Bacteria 8739
156 Ga0207652_10080084 3300025921 Bacteria 2855
157 Ga0207646_10058137 3300025922 Bacteria 3454
158 Ga0207681_10003354 3300025923 Bacteria 10028
159 Ga0207681_10031751 3300025923 Bacteria 3451
160 Ga0207650_10112670 3300025925 Bacteria 2108
161 Ga0207659_10026206 3300025926 Bacteria 3931
162 Ga0207659_10111425 3300025926 Bacteria 2081
163 Ga0207687_10169908 3300025927 Bacteria 1681
164 Ga0207644_10020048 3300025931 Bacteria 4543
165 Ga0207644_10025920 3300025931 Bacteria 4035
166 Ga0207706_10000154 3300025933 Bacteria 75674
167 Ga0207706_10000155 3300025933 Bacteria 75598
168 Ga0207686_10000088 3300025934 Bacteria 76743
169 Ga0207709_10033311 3300025935 Bacteria 3024
170 Ga0207670_10053232 3300025936 Bacteria 2726
171 Ga0207669_10000211 3300025937 Bacteria 26610
172 Ga0207691_10000920 3300025940 Bacteria 29189
173 Ga0207691_10001119 3300025940 Bacteria 26656
174 Ga0207711_10003338 3300025941 Bacteria 13912
175 Ga0207689_10000444 3300025942 Bacteria 38917
176 Ga0207689_10007255 3300025942 Bacteria 9733
177 Ga0207661_10021459 3300025944 Bacteria 4838
178 Ga0207679_10000781 3300025945 Bacteria 20836
179 Ga0207679_10001796 3300025945 Bacteria 13355
180 Ga0207679_10004081 3300025945 Bacteria 9061
181 Ga0207679_10038148 3300025945 Bacteria 3421
182 Ga0207712_10001110 3300025961 Bacteria 18801
183 Ga0207712_10001813 3300025961 Bacteria 14114
184 Ga0207712_10055948 3300025961 Bacteria 2778
185 Ga0207712_10185353 3300025961 Bacteria 1638
186 Ga0207668_10074924 3300025972 Bacteria 2431
187 Ga0207703_10047011 3300026035 Bacteria 3478
188 Ga0207678_10027953 3300026067 Bacteria 4924
189 Ga0207702_10143029 3300026078 Bacteria 2167
190 Ga0207648_10000096 3300026089 Bacteria 83916
191 Ga0207648_10059868 3300026089 Bacteria 3321
192 Ga0207676_10037850 3300026095 Bacteria 3679
193 Ga0207674_10001710 3300026116 Bacteria 28102
194 Ga0207674_10001733 3300026116 Bacteria 27874
195 Ga0207674_10004615 3300026116 Bacteria 16531
196 Ga0207674_10024069 3300026116 Bacteria 6513
197 Ga0207675_100000074 3300026118 Bacteria 76792
198 Ga0207675_100016155 3300026118 Bacteria 6972
199 Ga0207675_100052351 3300026118 Bacteria 3810
200 Ga0207675_100103374 3300026118 Bacteria 2685
201 Ga0207683_10059903 3300026121 Bacteria 3345
202 Ga0207698_10011599 3300026142 Bacteria 5722
203 Ga0207698_10040781 3300026142 Bacteria 3454
204 Ga0268266_10101814 3300028379 Bacteria 2533
205 Ga0268265_10001038 3300028380 Bacteria 25037
206 Ga0268265_10032232 3300028380 Bacteria 3794
207 Ga0268265_10049916 3300028380 Bacteria 3150
208 Ga0268264_10200444 3300028381 Bacteria 1826
209 Ga0265332_10022292 3300031238 Bacteria 2795
210 Ga0265339_10002404 3300031249 Bacteria 13421
211 Ga0307408_100003433 3300031548 Bacteria 10850
212 Ga0307408_100015542 3300031548 Bacteria 5069
213 Ga0265314_10020949 3300031711 Bacteria 5040
214 Ga0316576_10075812 3300031727 Bacteria 2488
215 Ga0307413_10046640 3300031824 Bacteria 2578
216 Ga0307406_10001519 3300031901 Bacteria 12812
217 Ga0307406_10041374 3300031901 Bacteria 2871
218 Ga0307407_10004932 3300031903 Bacteria 5734
219 Ga0307409_100018129 3300031995 Bacteria 4718
220 Ga0307416_100049600 3300032002 Bacteria 3339
221 Ga0307414_10002072 3300032004 Bacteria 10416
222 Ga0307411_10082099 3300032005 Bacteria 2222
223 Ga0373955_0058907 3300035172 Bacteria 2114
224 Ga0373931_0013451 3300035691 Bacteria 3985
225 Ga0373931_0051898 3300035691 Bacteria 2185
226 Ga0373937_0156590 3300036401 Bacteria 2135
227 Ga0436360_0949586 3300039438 Bacteria 14614
228 Ga0451577_0000001 3300042876 Bacteria 2461803
229 Ga0453683_0080961 3300044673 Bacteria 2034
230 Ga0453683_0190000 3300044673 Bacteria 1303
231 Ga0466967_0063862 3300045976 Bacteria 3273
232 Ga0495582_0030624 3300046473 Bacteria 2955
233 Ga0495643_0000704 3300046522 Bacteria 38406
234 Ga0495658_0008710 3300046683 Bacteria 5038
235 Ga0496102_0002510 3300048905 Bacteria 15657
236 Ga0496104_0005811 3300048907 Bacteria 10805
237 Ga0496105_0014348 3300048908 Bacteria 6306
238 Ga0496106_0006975 3300048909 Bacteria 8349
239 Ga0496108_0009684 3300048911 Bacteria 7808
240 Ga0496108_0129190 3300048911 Bacteria 2171
241 Ga0496109_0006068 3300048912 Bacteria 10153
242 Ga0496109_0013740 3300048912 Bacteria 7035
243 Ga0496109_0026680 3300048912 Bacteria 5154
244 Ga0496110_0003489 3300048913 Bacteria 12061
245 Ga0496111_0013800 3300048914 Bacteria 5507
246 Ga0496112_0003007 3300048915 Bacteria 13792
247 Ga0496112_0004824 3300048915 Bacteria 11514
248 Ga0496112_0161902 3300048915 Bacteria 2204
249 Ga0496115_0001566 3300048918 Bacteria 16449
250 Ga0496118_0032090 3300048921 Bacteria 4337
251 Ga0496123_0000306 3300048926 Bacteria 95266
252 Ga0496126_0065658 3300048929 Bacteria 3247
253 Ga0501034_0101183 3300049571 Bacteria 2876
254 Ga0501040_0025842 3300049576 Bacteria 3950
255 Ga0501042_0014610 3300049578 Bacteria 5363
256 Ga0501043_0020861 3300049579 Bacteria 5139
257 Ga0501043_0110116 3300049579 Bacteria 2162
258 Ga0501047_0000495 3300049581 Bacteria 42674
259 Ga0501047_0014505 3300049581 Bacteria 7494
260 Ga0501074_0053677 3300049590 Bacteria 2907
261 Ga0501075_0013985 3300049591 Bacteria 5744
262 Ga0501079_0015772 3300049741 Bacteria 5773
263 Ga0501080_0064280 3300049742 Bacteria 3414
264 Ga0501035_0006434 3300049822 Bacteria 11033
265 Ga0501035_0031351 3300049822 Bacteria 4842
266 Ga0501044_0028626 3300049823 Bacteria 5880
267 Ga0501044_0132166 3300049823 Bacteria 2489
268 nmdc:mga05p37_1102_c1 3300050507 Bacteria 31019
269 nmdc:mga05p37_17555_c2 3300050507 Bacteria 5066
270 nmdc:mga05p37_28133_c1 3300050507 Bacteria 6851
271 nmdc:mga09592_55572_c1 3300050508 Bacteria 3345
272 nmdc:mga09592_92588_c1 3300050508 Bacteria 2584
273 nmdc:mga0qj67_14797_c1 3300050509 Bacteria 5899
274 nmdc:mga0qj67_3406_c1 3300050509 Bacteria 11474
275 nmdc:mga06r32_16286_c1 3300050510 Bacteria 6771
276 nmdc:mga06r32_196332_c1 3300050510 Bacteria 2005
277 nmdc:mga06r32_31090_c1 3300050510 Bacteria 5012
278 nmdc:mga08y16_139359_c1 3300050511 Bacteria 2522
279 nmdc:mga08y16_25660_c1 3300050511 Bacteria 6218
280 nmdc:mga0n895_192205_c1 3300050512 Bacteria 2072
281 nmdc:mga0n895_23954_c1 3300050512 Bacteria 5746
282 nmdc:mga0n895_309985_c1 3300050512 Bacteria 1600
283 nmdc:mga0n895_70512_c1 3300050512 Bacteria 3464
284 nmdc:mga0a205_3449_c1 3300050515 Bacteria 14114
285 nmdc:mga0a205_78301_c2 3300050515 Bacteria 2861
286 nmdc:mga0a205_8028_c1 3300050515 Bacteria 9593
287 Ga0500628_000349 3300053129 Bacteria 8798
288 Ga0500568_0000093 3300053139 Bacteria 83403
289 2513612755 2513237090 Bacteria 7096802
290 2523106900 2522572158 Bacteria 6514390
291 2599103503 2597490356 Bacteria 7030811
292 2718716401 2718217752 Bacteria 915884
293 2846953390 2846952575 Bacteria 6587527
294 2848858864 2848858292 Bacteria 7391279
295 2965125774 2965119406 Bacteria 6956431
296 Ga0207706_10024352
297 Ga0055526_1003506
298 Ga0055528_1001199
299 Ga0070658_10023004
300 Ga0070676_10000654
301 Ga0070683_100009132
302 Ga0070683_100028895
303 Ga0070683_100029534
304 Ga0070683_100033171
305 Ga0070690_100043479
306 Ga0070670_100015138
307 Ga0070670_100016832
308 Ga0068869_100004132
309 Ga0068869_100013935
310 Ga0068868_100042515
311 Ga0070661_100002291
312 Ga0070661_100034880
313 Ga0070668_100005628
314 Ga0070669_100007561
315 Ga0070669_100024790
316 Ga0070675_100011176
317 Ga0070675_100111848
318 Ga0070671_100000523
319 Ga0070674_100000268
320 Ga0070674_100009839
321 Ga0070673_100023282
322 Ga0070673_100061991
323 Ga0070688_100025838
324 Ga0070659_100045343
325 Ga0070705_100001084
326 Ga0070705_100001902
327 Ga0070708_100014216
328 Ga0070663_100031142
329 Ga0070678_100003283
330 Ga0070662_100000244
331 Ga0070662_100001142
332 Ga0070681_10002790
333 Ga0068867_100001001
334 Ga0068867_100081820
335 Ga0070707_100000487
336 Ga0070707_100067962
337 Ga0070698_100003375
338 Ga0070698_100055515
339 Ga0070684_100010924
340 Ga0070697_100023283
341 Ga0070672_100024641
342 Ga0070672_100044702
343 Ga0070695_100006603
344 Ga0070695_100031489
345 Ga0070696_100024056
346 Ga0070696_100036900
347 Ga0070665_100050995
348 Ga0070665_100073457
349 Ga0070704_100052753
350 Ga0070664_100003056
351 Ga0070664_100024339
352 Ga0068857_100002829
353 Ga0068857_100021291
354 Ga0068857_100058882
355 Ga0068854_100137055
356 Ga0070702_100005726
357 Ga0068852_100024115
358 Ga0068852_100084360
359 Ga0068864_100001335
360 Ga0068864_100048499
361 Ga0068866_10000139
362 Ga0068861_100002627
363 Ga0068861_100002776
364 Ga0068861_100072222
365 Ga0068858_100016717
366 Ga0068860_100168929
367 Ga0068862_100000428
368 Ga0081455_10000028
369 Ga0081455_10001275
370 Ga0070712_100124609
371 Ga0097621_100012908
372 Ga0075428_100028309
373 Ga0075430_100001257
374 Ga0075430_100003872
375 Ga0075430_100021645
376 Ga0075430_100024621
377 Ga0075431_100001858
378 Ga0075431_100008393
379 Ga0075431_100024036
380 Ga0075431_100144875
381 Ga0075433_10081957
382 Ga0075434_100021655
383 Ga0075434_100032123
384 Ga0075434_100071573
385 Ga0075434_100148775
386 Ga0075429_100038096
387 Ga0075429_100063270
388 Ga0105240_10084406
389 Ga0111539_10014790
390 Ga0111539_10033007
391 Ga0105245_10056534
392 Ga0105245_10070343
393 Ga0114129_10017700
394 Ga0114129_10018923
395 Ga0105243_10014400
396 Ga0105241_10022851
397 Ga0105242_10003599
398 Ga0105248_10006813
399 Ga0105248_10022651
400 Ga0105248_10025169
401 Ga0105248_10062000
402 Ga0105249_10001389
403 Ga0105249_10009463
404 Ga0105249_10018670
405 Ga0105249_10055604
406 Ga0105249_10088082
407 Ga0105239_10011403
408 Ga0105239_10014177
409 Ga0105239_10062940
410 Ga0157371_10002384
411 Ga0157370_10069680
412 Ga0157369_10012517
413 Ga0157369_10014860
414 Ga0163162_10002928
415 Ga0157372_10005362
416 Ga0157372_10009902
417 Ga0157372_10241333
418 Ga0157375_10190418
419 Ga0163163_10044622
420 Ga0157380_10012805
421 Ga0157380_10025355
422 Ga0157377_10002699
423 Ga0157377_10006764
424 Ga0157379_10031196
425 Ga0163161_10081152
426 Ga0213871_10002591
427 Ga0209673_1000117
428 Ga0209564_1001780
429 Ga0209256_1005804
430 Ga0207697_10001428
431 Ga0207653_10013445
432 Ga0207642_10000910
433 Ga0207642_10011530
434 Ga0207688_10020938
435 Ga0207645_10000567
436 Ga0207645_10001391
437 Ga0207643_10003803
438 Ga0207705_10027603
439 Ga0207654_10026149
440 Ga0207707_10014047
441 Ga0207695_10005414
442 Ga0207695_10071163
443 Ga0207693_10114794
444 Ga0207662_10000481
445 Ga0207657_10007521
446 Ga0207657_10026425
447 Ga0207649_10003143
448 Ga0207649_10026729
449 Ga0207649_10030899
450 Ga0207652_10007581
451 Ga0207652_10080084
452 Ga0207646_10058137
453 Ga0207681_10003354
454 Ga0207681_10031751
455 Ga0207650_10112670
456 Ga0207659_10026206
457 Ga0207659_10111425
458 Ga0207687_10169908
459 Ga0207644_10020048
460 Ga0207644_10025920
461 Ga0207706_10000154
462 Ga0207706_10000155
463 Ga0207686_10000088
464 Ga0207709_10033311
465 Ga0207670_10053232
466 Ga0207669_10000211
467 Ga0207691_10000920
468 Ga0207691_10001119
469 Ga0207711_10003338
470 Ga0207689_10000444
471 Ga0207689_10007255
472 Ga0207661_10021459
473 Ga0207679_10000781
474 Ga0207679_10001796
475 Ga0207679_10004081
476 Ga0207679_10038148
477 Ga0207712_10001110
478 Ga0207712_10001813
479 Ga0207712_10055948
480 Ga0207712_10185353
481 Ga0207668_10074924
482 Ga0207703_10047011
483 Ga0207678_10027953
484 Ga0207702_10143029
485 Ga0207648_10000096
486 Ga0207648_10059868
487 Ga0207676_10037850
488 Ga0207674_10001710
489 Ga0207674_10001733
490 Ga0207674_10004615
491 Ga0207674_10024069
492 Ga0207675_100000074
493 Ga0207675_100016155
494 Ga0207675_100052351
495 Ga0207675_100103374
496 Ga0207683_10059903
497 Ga0207698_10011599
498 Ga0207698_10040781
499 Ga0268266_10101814
500 Ga0268265_10001038
501 Ga0268265_10032232
502 Ga0268265_10049916
503 Ga0268264_10200444
504 Ga0265332_10022292
505 Ga0265339_10002404
506 Ga0307408_100003433
507 Ga0307408_100015542
508 Ga0265314_10020949
509 Ga0316576_10075812
510 Ga0307413_10046640
511 Ga0307406_10001519
512 Ga0307406_10041374
513 Ga0307407_10004932
514 Ga0307409_100018129
515 Ga0307416_100049600
516 Ga0307414_10002072
517 Ga0307411_10082099
518 Ga0373955_0058907
519 Ga0373931_0013451
520 Ga0373931_0051898
521 Ga0373937_0156590
522 Ga0436360_0949586
523 Ga0451577_0000001
524 Ga0453683_0080961
525 Ga0453683_0190000
526 Ga0466967_0063862
527 Ga0495582_0030624
528 Ga0495643_0000704
529 Ga0495658_0008710
530 Ga0496102_0002510
531 Ga0496104_0005811
532 Ga0496105_0014348
533 Ga0496106_0006975
534 Ga0496108_0009684
535 Ga0496108_0129190
536 Ga0496109_0006068
537 Ga0496109_0013740
538 Ga0496109_0026680
539 Ga0496110_0003489
540 Ga0496111_0013800
541 Ga0496112_0003007
542 Ga0496112_0004824
543 Ga0496112_0161902
544 Ga0496115_0001566
545 Ga0496118_0032090
546 Ga0496123_0000306
547 Ga0496126_0065658
548 Ga0501034_0101183
549 Ga0501040_0025842
550 Ga0501042_0014610
551 Ga0501043_0020861
552 Ga0501043_0110116
553 Ga0501047_0000495
554 Ga0501047_0014505
555 Ga0501074_0053677
556 Ga0501075_0013985
557 Ga0501079_0015772
558 Ga0501080_0064280
559 Ga0501035_0006434
560 Ga0501035_0031351
561 Ga0501044_0028626
562 Ga0501044_0132166
563 nmdc:mga05p37_1102_c1
564 nmdc:mga05p37_17555_c2
565 nmdc:mga05p37_28133_c1
566 nmdc:mga09592_55572_c1
567 nmdc:mga09592_92588_c1
568 nmdc:mga0qj67_14797_c1
569 nmdc:mga0qj67_3406_c1
570 nmdc:mga06r32_16286_c1
571 nmdc:mga06r32_196332_c1
572 nmdc:mga06r32_31090_c1
573 nmdc:mga08y16_139359_c1
574 nmdc:mga08y16_25660_c1
575 nmdc:mga0n895_192205_c1
576 nmdc:mga0n895_23954_c1
577 nmdc:mga0n895_309985_c1
578 nmdc:mga0n895_70512_c1
579 nmdc:mga0a205_3449_c1
580 nmdc:mga0a205_78301_c2
581 nmdc:mga0a205_8028_c1
582 Ga0500628_000349
583 Ga0500568_0000093
584 2513612755
585 2523106900
586 2599103503
587 2718716401
588 2846953390
589 2848858864
590 2965125774

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12680

SnoaL_2

SnoaL-like domain

432

535

0.96

PF08245

Mur_ligase_M

Mur ligase middle domain

112

316

0.92

PF07366

SnoaL

SnoaL-like polyketide cyclase

430

543

0.91

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

338

457

0.9

PF01225

Mur_ligase

Mur ligase family, catalytic domain

29

108

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bub-assembly1.cif.gz_A crystal structure of mure ligase from thermotoga maritima in complex with adp 0.883 1 485
4bub-assembly1.cif.gz_A crystal structure of mure ligase from thermotoga maritima in complex with adp 0.8812 1 485
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.8788 23 482
2wtz-assembly1.cif.gz_A mure ligase of mycobacterium tuberculosis 0.8787 1 481
2xja-assembly1.cif.gz_A structure of mure from m.tuberculosis with dipeptide and adp 0.8742 1 483
ID Description Score Start End Superfamily
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.944 335 472 3.90.190.20
4c12A03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9423 344 482 3.90.190.20
4qf5B01 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;MurE/MurF, N-terminal domain 0.9414 27 83 3.40.1390.10
4c13A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9413 104 334 3.40.1190.10
4c13A01 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;MurE/MurF, N-terminal domain 0.9409 23 99 3.40.1390.10
ID Description Score Start End GO Terms
AF-A0A5R2MWL7-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9972 110 220 GO:0005524
GO:0009058
GO:0016881
AF-A0A1S6XQZ1-F1-model_v4 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (EC 6.3.2.13) 0.9961 87 485 GO:0005524
GO:0005737
GO:0008360
GO:0008765
GO:0009252
GO:0051301
GO:0071555
AF-A0A3S1Q2K8-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9955 110 270 GO:0005524
GO:0009058
GO:0016881
AF-A0A7X6IRJ0-F1-model_v4 deleted 0.9931 102 207
AF-A0A2N7SDX7-F1-model_v4 deleted 0.9889 73 283

Map