F392400

General Info

Members Datasets Scaffolds Average Seq Length
294 221 205 674

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2902682994|2902689921
Length 711
Sequence VAMKVCADHLRRDAFLYVRQSSLRQVFENTESTKRQYALRDRAVALGWPMERVHVIDSDLGISGAQSQDRDGFQHLVTEVAMGHAGIVLGLEVSRLARNNADWHRLIELAALSHTLILDEDGIYDPAHFNDRLLLGLKGTMSEAELHILKSRLQGGILNKARRGELEMPLPIGLTYTVNGRVVLDPDRQIQGTVRLLFDTFRETGSACAVVRRLRGQKILFPRRVRRGIGKGDVLWSAIDHSRVLQILHNPRYAGAFAYGRTRTAYNARLKTVQLRVQQSDWQVLIPDAHEGYISWAEYERNQTALAHNASGFSPGLRGRMPRHGSALLQGRMLCGRCGARMRVHYEPLHGRLQPYYVCNEAVVREAGKHCQWVRGAPVDEAISALLLQTVAPAAIEVALAVQQEIAQRVEQAAALRESQLQRARYEAELARRRYLKVDPENRLVADALEADWNARLRQLDTLQRDHERQREADRTLLDEPARRRIMALASDFPRVWNDEHTSAVERKRMLGLLIEDVTLIVGQQVDVHVRWRGGRTQSLAVERPQPMSRVRKTRPEVVSLIDELLETSTDRQIAARLNELDHRNWRGESFTMKKVILIRQTYALKSRFDRLGSVAVRPTLKLGSEFLSCAMKKTKTPRTTLAPGLAKVLKRLHYPLEVILLCVRWYVAYSLSLRNLAEMMDERGIAVDHSTVHRWVIKLLPLFERRFRKH

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 2508501050 Microvirga lupini Lut6 Isolate Nodule
3 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
4 2516143018 Ensifer sp. BR816 Isolate Nodule
5 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
6 2551306089 Sinorhizobium meliloti 1A42 Isolate Nodule
7 2551306092 Sinorhizobium meliloti AK75 Isolate Nodule
8 2643221557 Ensifer sp. Root558 Isolate Unclassified
9 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
10 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
11 2643221698 Ensifer sp. Root142 Isolate Unclassified
12 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
13 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
14 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
15 2916000859 Sinorhizobium meliloti USDA1562 Isolate Nodule
16 2916028427 Sinorhizobium meliloti USDA1613 Isolate Nodule
17 2916055098 Sinorhizobium meliloti USDA1770 Isolate Nodule
18 2916068649 Sinorhizobium meliloti USDA1220 Isolate Nodule
19 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
20 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
21 2921263974 Sinorhizobium meliloti USDA1107 Isolate Nodule
22 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
23 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
24 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
25 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
26 2924172951 Sinorhizobium meliloti USDA1626 Isolate Nodule
27 2924179722 Sinorhizobium meliloti USDA1280 Isolate Nodule
28 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
29 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
30 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
31 2937042894 Sinorhizobium meliloti USDA1687 Isolate Nodule
32 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
33 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
34 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
35 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
36 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
37 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
38 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
39 2957478035 Sinorhizobium meliloti USDA1171 Isolate Nodule
40 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
41 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
42 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
43 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
44 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
45 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
46 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
47 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
48 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
49 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
50 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
51 2967748971 Sinorhizobium meliloti USDA1024A Isolate Nodule
52 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
53 2967775926 Sinorhizobium meliloti USDA1678 Isolate Nodule
54 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
55 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
56 2970095765 Sinorhizobium meliloti USDA1225 Isolate Nodule
57 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
58 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
59 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
60 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
61 2970184632 Sinorhizobium meliloti USDA1593 Isolate Nodule
62 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
63 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
64 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
65 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
66 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
67 3300002126 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 Metagenome Rhizosphere
68 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
69 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
70 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
71 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
72 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
73 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
74 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
75 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
76 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
77 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
78 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
79 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
80 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
81 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
82 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
83 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
84 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
85 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
86 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
87 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
88 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
89 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
90 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
91 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
92 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
93 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
94 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
95 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
96 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
97 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
98 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
99 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
100 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
101 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
102 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
103 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
104 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
105 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
106 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
107 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
108 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
109 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
110 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
111 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
112 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
113 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
114 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
115 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
116 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
117 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
118 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
119 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
120 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
121 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
122 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
123 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
124 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
125 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
126 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
127 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
128 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
156 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
157 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
158 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
159 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
161 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
162 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
163 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
164 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
165 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
166 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
167 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
168 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
169 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
170 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
171 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
172 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
173 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
174 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
175 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
176 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
177 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
178 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
179 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
180 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
181 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
182 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
183 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
184 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
185 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
186 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
187 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
188 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
189 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
190 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
191 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
192 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
193 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
194 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
195 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
196 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
197 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
198 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
199 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
200 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
201 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
202 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
203 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
204 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
205 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
206 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
207 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
208 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
209 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
210 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
211 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
212 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
213 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
214 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
215 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
216 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
217 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
218 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
219 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule
220 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
221 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 69.39
Metatranscriptomes 0.34
Isolates 30.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.7
Nodule 30.27
Rhizoplane 0.34
Rhizosphere 64.29
Stem 0
Stem Tuber 0
Unclassified 3.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_9596187 2162886012 Plasmid 3230
2 JGI24739J22299_10002333 3300001989 Bacteria 7310
3 JGI24035J26624_1000896 3300002126 Plasmid 2822
4 JGI24742J22300_10001925 3300002244 Plasmid 3302
5 Ga0065712_10073616 3300005290 Bacteria 4332
6 Ga0070676_10019645 3300005328 Bacteria 3763
7 Ga0070670_100053948 3300005331 Bacteria 3451
8 Ga0070677_10004510 3300005333 Bacteria 4550
9 Ga0070666_10016092 3300005335 Bacteria 4780
10 Ga0068868_100021673 3300005338 Bacteria 4840
11 Ga0070668_100017217 3300005347 Bacteria 5409
12 Ga0070669_100012116 3300005353 Bacteria 6119
13 Ga0070675_100039241 3300005354 Bacteria 3863
14 Ga0070671_100043098 3300005355 Bacteria 3751
15 Ga0070674_100024598 3300005356 Bacteria 3911
16 Ga0070688_100013319 3300005365 Bacteria 4632
17 Ga0070667_100026487 3300005367 Bacteria 4823
18 Ga0070703_10012033 3300005406 Bacteria 2449
19 Ga0070714_100056655 3300005435 Bacteria 3353
20 Ga0070711_100053463 3300005439 Bacteria 2783
21 Ga0070708_100027435 3300005445 Bacteria 4886
22 Ga0070678_100048967 3300005456 Bacteria 3047
23 Ga0070685_10023371 3300005466 Bacteria 3385
24 Ga0070706_100032468 3300005467 Plasmid 4815
25 Ga0070698_100075836 3300005471 Bacteria 3366
26 Ga0070699_100017342 3300005518 Bacteria 6183
27 Ga0070697_100028747 3300005536 Bacteria 4453
28 Ga0070672_100040597 3300005543 Bacteria 3571
29 Ga0070665_100048735 3300005548 Bacteria 4253
30 Ga0070665_100163566 3300005548 Bacteria 2228
31 Ga0068855_100028938 3300005563 Bacteria 6628
32 Ga0068854_100043338 3300005578 Bacteria 3189
33 Ga0068852_100124330 3300005616 Bacteria 2366
34 Ga0068864_100025800 3300005618 Bacteria 4953
35 Ga0068866_10008917 3300005718 Bacteria 4244
36 Ga0068861_100052548 3300005719 Bacteria 3097
37 Ga0068863_100040722 3300005841 Bacteria 4417
38 Ga0070717_10021076 3300006028 Bacteria 5134
39 Ga0070717_10037459 3300006028 Bacteria 3938
40 Ga0075366_10013239 3300006195 Bacteria 4691
41 Ga0097621_100043956 3300006237 Plasmid 3603
42 Ga0097621_100045265 3300006237 Bacteria 3553
43 Ga0068871_100038832 3300006358 Plasmid 3805
44 Ga0068871_100042186 3300006358 Bacteria 3661
45 Ga0075428_100048138 3300006844 Bacteria 4680
46 Ga0075428_100075672 3300006844 Bacteria 3676
47 Ga0075428_100081516 3300006844 Bacteria 3531
48 Ga0075430_100122270 3300006846 Bacteria 2170
49 Ga0075433_10031372 3300006852 Bacteria 4542
50 Ga0075433_10040966 3300006852 Bacteria 4012
51 Ga0075433_10050222 3300006852 Bacteria 3630
52 Ga0075434_100027638 3300006871 Bacteria 5571
53 Ga0075434_100052083 3300006871 Bacteria 4067
54 Ga0075434_100066615 3300006871 Bacteria 3587
55 Ga0075434_100070496 3300006871 Bacteria 3486
56 Ga0075429_100013298 3300006880 Bacteria 7138
57 Ga0075429_100042000 3300006880 Bacteria 3980
58 Ga0068865_100020617 3300006881 Bacteria 4276
59 Ga0099826_10037952 3300006948 Bacteria 3390
60 Ga0075435_100007652 3300007076 Bacteria 7715
61 Ga0075435_100029196 3300007076 Bacteria 4328
62 Ga0075435_100087041 3300007076 Unclassified 2573
63 Ga0105240_10004925 3300009093 Bacteria 20074
64 Ga0111539_10009226 3300009094 Bacteria 12466
65 Ga0114129_10065688 3300009147 Bacteria 5062
66 Ga0114129_10121303 3300009147 Bacteria 3597
67 Ga0114129_10241461 3300009147 Unclassified 2428
68 Ga0105248_10071901 3300009177 Plasmid 3887
69 Ga0105248_10189210 3300009177 Bacteria 2319
70 Ga0105237_10001941 3300009545 Bacteria 26341
71 Ga0105237_10069214 3300009545 Bacteria 3524
72 Ga0105238_10005942 3300009551 Bacteria 12097
73 Ga0105239_10001859 3300010375 Bacteria 27609
74 Ga0105239_10080826 3300010375 Bacteria 3576
75 Ga0157370_10024127 3300013104 Bacteria 6028
76 Ga0157369_10052581 3300013105 Bacteria 4407
77 Ga0157369_10138068 3300013105 Bacteria 2580
78 Ga0163162_10021245 3300013306 Bacteria 6388
79 Ga0163162_10051373 3300013306 Bacteria 4137
80 Ga0157375_10042312 3300013308 Bacteria 4409
81 Ga0157380_10026048 3300014326 Bacteria 4439
82 Ga0163161_10011107 3300017792 Bacteria 6239
83 Ga0213874_10000721 3300021377 Bacteria 6689
84 Ga0209673_1011137 3300025273 Bacteria 3730
85 Ga0209676_1011508 3300025292 Bacteria 3560
86 Ga0209051_1015228 3300025303 Bacteria 3549
87 Ga0209257_1013879 3300025304 Bacteria 3526
88 Ga0207697_10009175 3300025315 Bacteria 4281
89 Ga0207656_10018113 3300025321 Bacteria 2767
90 Ga0207682_10007592 3300025893 Bacteria 4319
91 Ga0207642_10009641 3300025899 Bacteria 3368
92 Ga0207688_10049881 3300025901 Bacteria 2341
93 Ga0207645_10016755 3300025907 Bacteria 4845
94 Ga0207684_10006985 3300025910 Bacteria 10212
95 Ga0207684_10027861 3300025910 Plasmid 4812
96 Ga0207695_10004165 3300025913 Bacteria 19861
97 Ga0207671_10001532 3300025914 Bacteria 26501
98 Ga0207671_10038883 3300025914 Bacteria 3525
99 Ga0207663_10049515 3300025916 Bacteria 2606
100 Ga0207681_10006522 3300025923 Bacteria 7160
101 Ga0207650_10024432 3300025925 Bacteria 4295
102 Ga0207659_10010460 3300025926 Bacteria 5832
103 Ga0207644_10034100 3300025931 Bacteria 3561
104 Ga0207704_10024670 3300025938 Bacteria 3266
105 Ga0207691_10063880 3300025940 Bacteria 3337
106 Ga0207667_10074003 3300025949 Bacteria 3539
107 Ga0207668_10012587 3300025972 Bacteria 5184
108 Ga0207677_10036148 3300026023 Bacteria 3216
109 Ga0207641_10047668 3300026088 Bacteria 3614
110 Ga0207641_10070469 3300026088 Bacteria 3004
111 Ga0207648_10036438 3300026089 Bacteria 4333
112 Ga0207676_10052107 3300026095 Bacteria 3197
113 Ga0207675_100048286 3300026118 Bacteria 3973
114 Ga0207683_10035557 3300026121 Bacteria 4333
115 Ga0207698_10090677 3300026142 Bacteria 2500
116 Ga0209281_1005812 3300027111 Bacteria 3329
117 Ga0209281_1006331 3300027111 Bacteria 3108
118 Ga0209282_1029803 3300027666 Bacteria 3364
119 Ga0207428_10030096 3300027907 Bacteria 4490
120 Ga0207428_10039442 3300027907 Bacteria 3835
121 Ga0268266_10044346 3300028379 Bacteria 3802
122 Ga0265762_1005178 3300030760 Bacteria 2335
123 Ga0316575_10016066 3300031665 Bacteria 2827
124 Ga0316576_10058431 3300031727 Bacteria 2821
125 Ga0316578_10023233 3300031728 Bacteria 3468
126 Ga0315913_1031504 3300033430 Bacteria 3668
127 Ga0315915_1029034 3300033464 Bacteria 3617
128 Ga0373943_0041554 3300035170 Bacteria 2224
129 Ga0373955_0029221 3300035172 Bacteria 2865
130 Ga0316574_0024283 3300035398 Bacteria 3626
131 Ga0373935_0018126 3300035692 Bacteria 4279
132 Ga0373935_0029044 3300035692 Bacteria 3420
133 Ga0373937_0012225 3300036401 Bacteria 7539
134 Ga0373937_0061794 3300036401 Bacteria 3443
135 Ga0373937_0104236 3300036401 Bacteria 2635
136 Ga0316584_0039644 3300036712 Plasmid 3506
137 Ga0316584_0044258 3300036712 Bacteria 3320
138 Ga0316584_0059741 3300036712 Bacteria 2855
139 Ga0373925_0069721 3300037068 Bacteria 2656
140 Ga0395898_0005998 3300037466 Bacteria 13047
141 Ga0395898_0016436 3300037466 Bacteria 7571
142 Ga0395905_0121511 3300037471 Unclassified 2455
143 Ga0395905_0153725 3300037471 Bacteria 2164
144 Ga0436364_0573198 3300037853 Bacteria 2341
145 Ga0395901_0067418 3300038443 Bacteria 3727
146 Ga0436365_1909174 3300039437 Bacteria 4843
147 Ga0436360_1179998 3300039438 Plasmid 3137
148 Ga0436363_0354999 3300039450 Unclassified 4382
149 Ga0436363_1495851 3300039450 Bacteria 7678
150 Ga0436362_0501110 3300039453 Bacteria 2379
151 Ga0466961_0028439 3300044693 Bacteria 3594
152 Ga0495651_0023975 3300046462 Bacteria 4747
153 Ga0495653_0080765 3300046463 Bacteria 2404
154 Ga0495664_0013399 3300046477 Bacteria 4649
155 Ga0495585_0004568 3300046492 Bacteria 8953
156 Ga0495608_0030185 3300046511 Bacteria 3673
157 Ga0495628_0034929 3300046516 Bacteria 4041
158 Ga0495628_0038678 3300046516 Bacteria 3817
159 Ga0495630_0050344 3300046517 Plasmid 3118
160 Ga0495644_0012370 3300046523 Bacteria 3281
161 Ga0495652_0042185 3300046529 Bacteria 3935
162 Ga0495665_0050048 3300046531 Bacteria 2215
163 Ga0495656_0006118 3300046615 Bacteria 4201
164 Ga0495656_0008764 3300046615 Bacteria 3622
165 Ga0495659_0006232 3300046664 Bacteria 3770
166 Ga0495658_0031420 3300046683 Bacteria 2892
167 Ga0495613_0035300 3300046689 Bacteria 3711
168 Ga0495624_0066006 3300046690 Bacteria 2259
169 Ga0495600_0044247 3300046809 Bacteria 2905
170 Ga0495604_0032725 3300047317 Bacteria 4119
171 Ga0495674_0042946 3300047319 Bacteria 4028
172 Ga0495674_0113623 3300047319 Bacteria 2293
173 Ga0495672_0036040 3300047320 Bacteria 3041
174 Ga0495680_0039444 3300047322 Bacteria 3768
175 Ga0495675_0041631 3300047444 Bacteria 2927
176 Ga0495677_0001530 3300047445 Bacteria 9304
177 Ga0495602_0047421 3300048088 Bacteria 3871
178 Ga0496102_0037896 3300048905 Bacteria 4349
179 nmdc:mga05p37_109169_c1 3300050507 Bacteria 3404
180 nmdc:mga05p37_13815_c1 3300050507 Bacteria 9673
181 nmdc:mga05p37_171637_c1 3300050507 Plasmid 2645
182 nmdc:mga05p37_51756_c1 3300050507 Bacteria 5050
183 nmdc:mga09592_27924_c1 3300050508 Bacteria 4685
184 nmdc:mga09592_36959_c1 3300050508 Bacteria 4093
185 nmdc:mga0qj67_111179_c1 3300050509 Bacteria 2212
186 nmdc:mga0qj67_43100_c1 3300050509 Bacteria 3554
187 nmdc:mga06r32_62490_c1 3300050510 Bacteria 3588
188 nmdc:mga06r32_68926_c1 3300050510 Bacteria 3418
189 nmdc:mga08y16_15663_c1 3300050511 Bacteria 7972
190 nmdc:mga0n895_150974_c1 3300050512 Bacteria 2354
191 nmdc:mga0n895_16083_c1 3300050512 Bacteria 6856
192 nmdc:mga0n895_64805_c1 3300050512 Bacteria 3615
193 nmdc:mga0n895_75410_c1 3300050512 Plasmid 3353
194 nmdc:mga0rr50_11417_c1 3300050513 Bacteria 5688
195 nmdc:mga0rr50_20172_c1 3300050513 Bacteria 4517
196 nmdc:mga0rr50_50572_c1 3300050513 Plasmid 3080
197 nmdc:mga08x19_17818_c1 3300050514 Bacteria 4348
198 nmdc:mga0a205_56893_c1 3300050515 Bacteria 3776
199 nmdc:mga0a205_6516_c1 3300050515 Bacteria 10557
200 nmdc:mga0a205_66550_c1 3300050515 Bacteria 3482
201 nmdc:mga0a205_93112_c1 3300050515 Bacteria 2912
202 Ga0495601_0018738 3300053077 Bacteria 4213
203 Ga0495601_0026042 3300053077 Bacteria 3609
204 Ga0495612_0013157 3300053078 Bacteria 3332
205 Ga0530510_0035716 3300061734 Bacteria 3582

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006844 Ga0075428_100075672 Ga0075428_1000756724 502
2 3300047320 Ga0495672_0036040 Ga0495672_0036040_1153_2889 553
3 iso_pu_bacteria 2921296804 2921304006 553
4 iso_pu_bacteria 8003999396 8004005569 554
5 iso_pu_bacteria 8003999396 8004006383 554
6 3300005518 Ga0070699_100017342 Ga0070699_1000173426 561
7 3300025910 Ga0207684_10006985 Ga0207684_1000698512 561
8 iso_pu_bacteria 2970054988 2970055567 574
9 3300005406 Ga0070703_10012033 Ga0070703_100120331 576
10 3300046516 Ga0495628_0038678 Ga0495628_0038678_177_2066 577
11 iso_pu_bacteria 2915980308 2915980871 577
12 iso_pu_bacteria 2960680706 2960681458 577
13 3300037471 Ga0395905_0153725 Ga0395905_0153725_55_2013 584
14 3300046511 Ga0495608_0030185 Ga0495608_0030185_1037_2866 584
15 3300046516 Ga0495628_0034929 Ga0495628_0034929_1751_3580 584
16 3300046531 Ga0495665_0050048 Ga0495665_0050048_106_1935 584
17 3300046690 Ga0495624_0066006 Ga0495624_0066006_254_2083 584
18 3300047319 Ga0495674_0113623 Ga0495674_0113623_414_2243 584
19 3300047444 Ga0495675_0041631 Ga0495675_0041631_276_2105 584
20 3300048088 Ga0495602_0047421 Ga0495602_0047421_1517_3346 584
21 3300039450 Ga0436363_1495851 Ga0436363_1495851_792_2723 603
22 3300039453 Ga0436362_0501110 Ga0436362_0501110_351_2282 603
23 3300036712 Ga0316584_0044258 Ga0316584_0044258_128_2185 612
24 3300061734 Ga0530510_0035716 Ga0530510_0035716_1627_3564 612
25 3300039450 Ga0436363_0354999 Ga0436363_0354999_445_2475 615
26 3300035692 Ga0373935_0029044 Ga0373935_0029044_56_1999 616
27 3300047319 Ga0495674_0042946 Ga0495674_0042946_665_2608 616
28 3300053077 Ga0495601_0018738 Ga0495601_0018738_866_2809 616
29 3300053078 Ga0495612_0013157 Ga0495612_0013157_78_2021 616
30 3300050513 nmdc:mga0rr50_50572_c1 nmdc:mga0rr50_50572_c1_36_2126 620
31 3300025273 Ga0209673_1011137 Ga0209673_10111372 625
32 3300025292 Ga0209676_1011508 Ga0209676_10115084 625
33 3300025304 Ga0209257_1013879 Ga0209257_10138792 625
34 3300027111 Ga0209281_1006331 Ga0209281_10063314 625
35 3300033430 Ga0315913_1031504 Ga0315913_10315045 625
36 3300033464 Ga0315915_1029034 Ga0315915_10290342 625
37 3300021377 Ga0213874_10000721 Ga0213874_100007214 629
38 3300005467 Ga0070706_100032468 Ga0070706_1000324682 630
39 3300025910 Ga0207684_10027861 Ga0207684_100278612 630
40 3300006237 Ga0097621_100043956 Ga0097621_1000439561 632
41 3300006358 Ga0068871_100038832 Ga0068871_1000388324 632
42 3300009177 Ga0105248_10071901 Ga0105248_100719011 632
43 iso_pu_bacteria 8055301274 8055309168 632
44 3300005548 Ga0070665_100163566 Ga0070665_1001635661 633
45 3300028379 Ga0268266_10044346 Ga0268266_100443466 633
46 3300013105 Ga0157369_10138068 Ga0157369_101380682 634
47 3300009177 Ga0105248_10189210 Ga0105248_101892101 636
48 3300005471 Ga0070698_100075836 Ga0070698_1000758361 638
49 3300009545 Ga0105237_10069214 Ga0105237_100692145 639
50 3300010375 Ga0105239_10080826 Ga0105239_100808262 639
51 3300025914 Ga0207671_10038883 Ga0207671_100388832 639
52 3300037853 Ga0436364_0573198 Ga0436364_0573198_126_2216 640
53 3300006948 Ga0099826_10037952 Ga0099826_100379521 641
54 3300027666 Ga0209282_1029803 Ga0209282_10298034 641
55 3300031728 Ga0316578_10023233 Ga0316578_100232334 641
56 3300035172 Ga0373955_0029221 Ga0373955_0029221_761_2842 641
57 3300036401 Ga0373937_0061794 Ga0373937_0061794_104_2185 641
58 3300037068 Ga0373925_0069721 Ga0373925_0069721_109_2190 641
59 3300046462 Ga0495651_0023975 Ga0495651_0023975_1212_3302 641
60 3300046683 Ga0495658_0031420 Ga0495658_0031420_794_2875 641
61 3300046689 Ga0495613_0035300 Ga0495613_0035300_924_3005 641
62 3300046809 Ga0495600_0044247 Ga0495600_0044247_456_2537 641
63 3300047322 Ga0495680_0039444 Ga0495680_0039444_813_2894 641
64 3300005445 Ga0070708_100027435 Ga0070708_1000274352 642
65 3300005536 Ga0070697_100028747 Ga0070697_1000287473 642
66 3300006028 Ga0070717_10037459 Ga0070717_100374594 642
67 3300006195 Ga0075366_10013239 Ga0075366_100132395 642
68 3300007076 Ga0075435_100087041 Ga0075435_1000870412 642
69 3300025303 Ga0209051_1015228 Ga0209051_10152285 642
70 3300036401 Ga0373937_0104236 Ga0373937_0104236_532_2622 646
71 3300044693 Ga0466961_0028439 Ga0466961_0028439_1359_3443 647
72 iso_pu_bacteria 2902682994 2902689921 649
73 3300048905 Ga0496102_0037896 Ga0496102_0037896_1533_3614 655
74 3300006852 Ga0075433_10031372 Ga0075433_100313725 656
75 3300006871 Ga0075434_100066615 Ga0075434_1000666152 656
76 3300009147 Ga0114129_10065688 Ga0114129_100656882 656
77 3300046615 Ga0495656_0008764 Ga0495656_0008764_159_2243 656
78 3300050507 nmdc:mga05p37_13815_c1 nmdc:mga05p37_13815_c1_6302_8389 656
79 3300050512 nmdc:mga0n895_75410_c1 nmdc:mga0n895_75410_c1_135_2222 656
80 3300050515 nmdc:mga0a205_6516_c1 nmdc:mga0a205_6516_c1_108_2195 656
81 3300046517 Ga0495630_0050344 Ga0495630_0050344_85_2166 658
82 3300026118 Ga0207675_100048286 Ga0207675_1000482863 660
83 3300009094 Ga0111539_10009226 Ga0111539_1000922614 661
84 3300013306 Ga0163162_10021245 Ga0163162_100212452 661
85 3300026088 Ga0207641_10047668 Ga0207641_100476685 661
86 3300037471 Ga0395905_0121511 Ga0395905_0121511_317_2398 661
87 3300039438 Ga0436360_1179998 Ga0436360_1179998_595_2679 661
88 3300036401 Ga0373937_0012225 Ga0373937_0012225_2044_4113 662
89 3300053077 Ga0495601_0026042 Ga0495601_0026042_155_2224 662
90 3300050509 nmdc:mga0qj67_43100_c1 nmdc:mga0qj67_43100_c1_110_2179 663
91 3300050510 nmdc:mga06r32_62490_c1 nmdc:mga06r32_62490_c1_1388_3457 663
92 3300009093 Ga0105240_10004925 Ga0105240_1000492514 664
93 3300009545 Ga0105237_10001941 Ga0105237_1000194112 664
94 3300009551 Ga0105238_10005942 Ga0105238_1000594213 664
95 3300010375 Ga0105239_10001859 Ga0105239_1000185912 664
96 3300025913 Ga0207695_10004165 Ga0207695_1000416514 664
97 3300025914 Ga0207671_10001532 Ga0207671_1000153213 664
98 3300035170 Ga0373943_0041554 Ga0373943_0041554_43_2130 664
99 3300035692 Ga0373935_0018126 Ga0373935_0018126_903_2990 664
100 iso_pu_bacteria 2643221603 2644029378 664
101 iso_pu_bacteria 2990703756 2990710696 664
102 3300046477 Ga0495664_0013399 Ga0495664_0013399_76_2148 665
103 iso_pu_bacteria 2508501050 2508731354 665
104 iso_pu_bacteria 2512875026 2512974493 665
105 iso_pu_bacteria 2512875026 2512974587 665
106 iso_pu_bacteria 2512875026 2512975387 665
107 iso_pu_bacteria 2516143018 2516210063 665
108 iso_pu_bacteria 2517487022 2517567795 665
109 iso_pu_bacteria 2551306089 2551712010 665
110 iso_pu_bacteria 2551306089 2551714594 665
111 iso_pu_bacteria 2551306092 2551732963 665
112 iso_pu_bacteria 2643221557 2643805072 665
113 iso_pu_bacteria 2643221644 2644248157 665
114 iso_pu_bacteria 2643221698 2644543542 665
115 iso_pu_bacteria 2915993759 2915995778 665
116 iso_pu_bacteria 2916000859 2916002121 665
117 iso_pu_bacteria 2916000859 2916003121 665
118 iso_pu_bacteria 2916028427 2916030053 665
119 iso_pu_bacteria 2916055098 2916055611 665
120 iso_pu_bacteria 2916068649 2916076208 665
121 iso_pu_bacteria 2921237296 2921240032 665
122 iso_pu_bacteria 2921244191 2921245601 665
123 iso_pu_bacteria 2921263974 2921268910 665
124 iso_pu_bacteria 2921282425 2921285574 665
125 iso_pu_bacteria 2924144063 2924144890 665
126 iso_pu_bacteria 2924150972 2924153279 665
127 iso_pu_bacteria 2924172951 2924175232 665
128 iso_pu_bacteria 2924179722 2924180060 665
129 iso_pu_bacteria 2924200457 2924201359 665
130 iso_pu_bacteria 2937016420 2937016948 665
131 iso_pu_bacteria 2937036028 2937042151 665
132 iso_pu_bacteria 2937042894 2937046294 665
133 iso_pu_bacteria 2937056579 2937058070 665
134 iso_pu_bacteria 2937056579 2937059709 665
135 iso_pu_bacteria 2937084907 2937088980 665
136 iso_pu_bacteria 2937091812 2937095287 665
137 iso_pu_bacteria 2937106411 2937109707 665
138 iso_pu_bacteria 2957450854 2957456274 665
139 iso_pu_bacteria 2957457609 2957459514 665
140 iso_pu_bacteria 2957464669 2957465509 665
141 iso_pu_bacteria 2957478035 2957478735 665
142 iso_pu_bacteria 2957484790 2957487050 665
143 iso_pu_bacteria 2957498199 2957500526 665
144 iso_pu_bacteria 2960584000 2960589584 665
145 iso_pu_bacteria 2960637947 2960641552 665
146 iso_pu_bacteria 2964607997 2964609603 665
147 iso_pu_bacteria 2964607997 2964611577 665
148 iso_pu_bacteria 2964621998 2964624805 665
149 iso_pu_bacteria 2964656573 2964658246 665
150 iso_pu_bacteria 2964685014 2964686093 665
151 iso_pu_bacteria 2964719344 2964723100 665
152 iso_pu_bacteria 2967671571 2967674224 665
153 iso_pu_bacteria 2967748971 2967752665 665
154 iso_pu_bacteria 2967769361 2967773471 665
155 iso_pu_bacteria 2967775926 2967779518 665
156 iso_pu_bacteria 2970026789 2970028158 665
157 iso_pu_bacteria 2970095765 2970097748 665
158 iso_pu_bacteria 2970095765 2970097925 665
159 iso_pu_bacteria 2970156795 2970160021 665
160 iso_pu_bacteria 2970164137 2970168709 665
161 iso_pu_bacteria 2970170962 2970172982 665
162 iso_pu_bacteria 2970177841 2970179497 665
163 iso_pu_bacteria 2970184632 2970187030 665
164 iso_pu_bacteria 2977530762 2977532200 665
165 iso_pu_bacteria 2977537788 2977538652 665
166 iso_pu_bacteria 2977558990 2977561313 665
167 iso_pu_bacteria 643692032 643692018 665
168 iso_pu_bacteria 643692032 643692260 665
169 iso_pu_bacteria 643692032 643821965 665
170 iso_pu_bacteria 643692032 643822025 665
171 iso_pu_bacteria 643692032 643822790 665
172 iso_pu_bacteria 643692032 643822853 665
173 iso_pu_bacteria 643692032 643823365 665
174 iso_pu_bacteria 643692032 643823535 665
175 iso_pu_bacteria 643692032 643825801 665
176 iso_pu_bacteria 643692032 643826443 665
177 iso_pu_bacteria 8003992118 8003998415 665
178 iso_pu_bacteria 8003992118 8003999035 665
179 iso_pu_bacteria 8003992118 8003999292 665
180 iso_pu_bacteria 8003992118 8003999339 665
181 iso_pu_bacteria 8003999396 8004005943 665
182 3300001989 JGI24739J22299_10002333 JGI24739J22299_100023335 668
183 3300006844 Ga0075428_100048138 Ga0075428_1000481383 668
184 3300006871 Ga0075434_100052083 Ga0075434_1000520834 668
185 3300006880 Ga0075429_100013298 Ga0075429_1000132987 668
186 3300007076 Ga0075435_100007652 Ga0075435_1000076527 668
187 3300009147 Ga0114129_10241461 Ga0114129_102414611 668
188 3300027907 Ga0207428_10039442 Ga0207428_100394422 668
189 3300046463 Ga0495653_0080765 Ga0495653_0080765_51_2132 668
190 3300046529 Ga0495652_0042185 Ga0495652_0042185_1638_3719 668
191 3300046615 Ga0495656_0006118 Ga0495656_0006118_1281_3362 668
192 3300047317 Ga0495604_0032725 Ga0495604_0032725_388_2469 668
193 3300050507 nmdc:mga05p37_171637_c1 nmdc:mga05p37_171637_c1_496_2586 668
194 3300050508 nmdc:mga09592_36959_c1 nmdc:mga09592_36959_c1_1885_3975 668
195 3300050512 nmdc:mga0n895_16083_c1 nmdc:mga0n895_16083_c1_734_2824 668
196 3300050513 nmdc:mga0rr50_11417_c1 nmdc:mga0rr50_11417_c1_1424_3514 668
197 3300050514 nmdc:mga08x19_17818_c1 nmdc:mga08x19_17818_c1_26_2116 668
198 3300050515 nmdc:mga0a205_66550_c1 nmdc:mga0a205_66550_c1_67_2157 668
199 2162886012 MBSR1b_contig_9596187 MBSR1b_0195.00001320 669
200 3300002126 JGI24035J26624_1000896 JGI24035J26624_10008961 669
201 3300002244 JGI24742J22300_10001925 JGI24742J22300_100019251 669
202 3300005290 Ga0065712_10073616 Ga0065712_100736164 669
203 3300005328 Ga0070676_10019645 Ga0070676_100196452 669
204 3300005331 Ga0070670_100053948 Ga0070670_1000539481 669
205 3300005333 Ga0070677_10004510 Ga0070677_100045102 669
206 3300005335 Ga0070666_10016092 Ga0070666_100160922 669
207 3300005338 Ga0068868_100021673 Ga0068868_1000216735 669
208 3300005347 Ga0070668_100017217 Ga0070668_1000172173 669
209 3300005353 Ga0070669_100012116 Ga0070669_1000121165 669
210 3300005354 Ga0070675_100039241 Ga0070675_1000392412 669
211 3300005355 Ga0070671_100043098 Ga0070671_1000430981 669
212 3300005356 Ga0070674_100024598 Ga0070674_1000245985 669
213 3300005365 Ga0070688_100013319 Ga0070688_1000133193 669
214 3300005367 Ga0070667_100026487 Ga0070667_1000264876 669
215 3300005435 Ga0070714_100056655 Ga0070714_1000566551 669
216 3300005439 Ga0070711_100053463 Ga0070711_1000534632 669
217 3300005456 Ga0070678_100048967 Ga0070678_1000489673 669
218 3300005466 Ga0070685_10023371 Ga0070685_100233712 669
219 3300005543 Ga0070672_100040597 Ga0070672_1000405971 669
220 3300005548 Ga0070665_100048735 Ga0070665_1000487354 669
221 3300005563 Ga0068855_100028938 Ga0068855_1000289383 669
222 3300005578 Ga0068854_100043338 Ga0068854_1000433383 669
223 3300005616 Ga0068852_100124330 Ga0068852_1001243302 669
224 3300005618 Ga0068864_100025800 Ga0068864_1000258005 669
225 3300005718 Ga0068866_10008917 Ga0068866_100089175 669
226 3300005719 Ga0068861_100052548 Ga0068861_1000525482 669
227 3300005841 Ga0068863_100040722 Ga0068863_1000407225 669
228 3300006028 Ga0070717_10021076 Ga0070717_100210764 669
229 3300006237 Ga0097621_100045265 Ga0097621_1000452651 669
230 3300006358 Ga0068871_100042186 Ga0068871_1000421864 669
231 3300006844 Ga0075428_100081516 Ga0075428_1000815161 669
232 3300006846 Ga0075430_100122270 Ga0075430_1001222701 669
233 3300006852 Ga0075433_10040966 Ga0075433_100409664 669
234 3300006852 Ga0075433_10050222 Ga0075433_100502225 669
235 3300006871 Ga0075434_100027638 Ga0075434_1000276382 669
236 3300006871 Ga0075434_100070496 Ga0075434_1000704961 669
237 3300006880 Ga0075429_100042000 Ga0075429_1000420005 669
238 3300006881 Ga0068865_100020617 Ga0068865_1000206175 669
239 3300007076 Ga0075435_100029196 Ga0075435_1000291964 669
240 3300009147 Ga0114129_10121303 Ga0114129_101213031 669
241 3300013104 Ga0157370_10024127 Ga0157370_100241274 669
242 3300013105 Ga0157369_10052581 Ga0157369_100525815 669
243 3300013306 Ga0163162_10051373 Ga0163162_100513731 669
244 3300013308 Ga0157375_10042312 Ga0157375_100423125 669
245 3300014326 Ga0157380_10026048 Ga0157380_100260485 669
246 3300017792 Ga0163161_10011107 Ga0163161_100111072 669
247 3300025315 Ga0207697_10009175 Ga0207697_100091753 669
248 3300025321 Ga0207656_10018113 Ga0207656_100181131 669
249 3300025893 Ga0207682_10007592 Ga0207682_100075925 669
250 3300025899 Ga0207642_10009641 Ga0207642_100096411 669
251 3300025901 Ga0207688_10049881 Ga0207688_100498812 669
252 3300025907 Ga0207645_10016755 Ga0207645_100167555 669
253 3300025916 Ga0207663_10049515 Ga0207663_100495152 669
254 3300025923 Ga0207681_10006522 Ga0207681_100065225 669
255 3300025925 Ga0207650_10024432 Ga0207650_100244324 669
256 3300025926 Ga0207659_10010460 Ga0207659_100104602 669
257 3300025931 Ga0207644_10034100 Ga0207644_100341002 669
258 3300025938 Ga0207704_10024670 Ga0207704_100246703 669
259 3300025940 Ga0207691_10063880 Ga0207691_100638802 669
260 3300025949 Ga0207667_10074003 Ga0207667_100740035 669
261 3300025972 Ga0207668_10012587 Ga0207668_100125873 669
262 3300026023 Ga0207677_10036148 Ga0207677_100361481 669
263 3300026088 Ga0207641_10070469 Ga0207641_100704693 669
264 3300026089 Ga0207648_10036438 Ga0207648_100364385 669
265 3300026095 Ga0207676_10052107 Ga0207676_100521074 669
266 3300026121 Ga0207683_10035557 Ga0207683_100355575 669
267 3300026142 Ga0207698_10090677 Ga0207698_100906772 669
268 3300027111 Ga0209281_1005812 Ga0209281_10058124 669
269 3300027907 Ga0207428_10030096 Ga0207428_100300963 669
270 3300030760 Ga0265762_1005178 Ga0265762_10051782 669
271 3300031665 Ga0316575_10016066 Ga0316575_100160663 669
272 3300031727 Ga0316576_10058431 Ga0316576_100584311 669
273 3300035398 Ga0316574_0024283 Ga0316574_0024283_1435_3528 669
274 3300036712 Ga0316584_0039644 Ga0316584_0039644_1389_3482 669
275 3300036712 Ga0316584_0059741 Ga0316584_0059741_654_2747 669
276 3300037466 Ga0395898_0005998 Ga0395898_0005998_4698_6785 669
277 3300037466 Ga0395898_0016436 Ga0395898_0016436_5367_7460 669
278 3300038443 Ga0395901_0067418 Ga0395901_0067418_30_2117 669
279 3300039437 Ga0436365_1909174 Ga0436365_1909174_1767_3860 669
280 3300046492 Ga0495585_0004568 Ga0495585_0004568_2959_5043 669
281 3300046523 Ga0495644_0012370 Ga0495644_0012370_13_2097 669
282 3300046664 Ga0495659_0006232 Ga0495659_0006232_1628_3712 669
283 3300047445 Ga0495677_0001530 Ga0495677_0001530_5090_7174 669
284 3300050507 nmdc:mga05p37_109169_c1 nmdc:mga05p37_109169_c1_1277_3370 669
285 3300050507 nmdc:mga05p37_51756_c1 nmdc:mga05p37_51756_c1_1993_4086 669
286 3300050508 nmdc:mga09592_27924_c1 nmdc:mga09592_27924_c1_996_3089 669
287 3300050509 nmdc:mga0qj67_111179_c1 nmdc:mga0qj67_111179_c1_61_2154 669
288 3300050510 nmdc:mga06r32_68926_c1 nmdc:mga06r32_68926_c1_26_2119 669
289 3300050511 nmdc:mga08y16_15663_c1 nmdc:mga08y16_15663_c1_1286_3379 669
290 3300050512 nmdc:mga0n895_150974_c1 nmdc:mga0n895_150974_c1_27_2120 669
291 3300050512 nmdc:mga0n895_64805_c1 nmdc:mga0n895_64805_c1_1381_3474 669
292 3300050513 nmdc:mga0rr50_20172_c1 nmdc:mga0rr50_20172_c1_1959_4052 669
293 3300050515 nmdc:mga0a205_56893_c1 nmdc:mga0a205_56893_c1_1585_3678 669
294 3300050515 nmdc:mga0a205_93112_c1 nmdc:mga0a205_93112_c1_257_2350 669

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07508

Recombinase

Recombinase

189

309

0.91

PF00239

Resolvase

Resolvase, N terminal domain

14

166

0.88

PF13408

Zn_ribbon_recom

Recombinase zinc beta ribbon domain

328

388

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j2n-assembly1.cif.gz_A crystal structure of mycobacteriophage pukovnik xis 0.8987 595 635
7p8n-assembly1.cif.gz_a tmhydabc- t. maritima hydrogenase with bridge closed 0.8328 493 521
4fer-assembly1.cif.gz_A crystal structure of bacillus subtilis expansin (exlx1) in complex with cellohexaose 0.7743 500 522
8a8o-assembly1.cif.gz_C paps reductase from methanothermococcus thermolithotrophicus refined to 1.45 a 0.7728 496 525
2fja-assembly1.cif.gz_D adenosine 5'-phosphosulfate reductase in complex with substrate 0.7469 495 525
ID Description Score Start End Superfamily
af_A0A1D8PMH3_142_489_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8799 493 524 2.130.10.10
af_Q94CQ0_256_430_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8573 493 521 2.130.10.10
af_O53807_4_54_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8238 596 638 1.10.10.10
af_P76347_734_835_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8226 503 521 2.60.40.10
af_A4I8Y8_92_372_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8175 493 526 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A5M6IIT9-F1-model_v4 Recombinase family protein 0.9494 20 126 GO:0000150
GO:0003677
AF-A0A1S1RSU1-F1-model_v4 deleted 0.9462 159 299
AF-A0A6N7FMB0-F1-model_v4 Recombinase 0.9437 4 92 GO:0000150
GO:0003677
AF-A0A528DH40-F1-model_v4 MerR family transcriptional regulator 0.9424 537 638
AF-A0A4R1NZ54-F1-model_v4 deleted 0.9397 1 121

Feature Viewer

pLDDT pTM Quality
80.34 0.54 Medium
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Predicted Structure (AlphaFold2)

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