F392381

General Info

Members Datasets Scaffolds Average Seq Length
294 149 279 259

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221664|2644358475
Length 292
Sequence SSTGSRRHIAGAAAALALSAAALVAAAPVAMAAETKPVRFILVGDSTMANSSGYGDALCARINRSDTCINLARGGRSSGSFRAEGRWDEVQGLLRGSAAYRATYVLIQFGHNDQPGKPGRSTDLATEFPANMARYAQEVKALGGVPVLVTPLTRRTFKGDTLENNLQPWADVVRKVAAQEGVPLLDLNAKSHAAVQAMGQDEADTLAVVPRPANYMAPAVLPGAAPAAQGAAAGAPAGATAAATEPQGAPKSAFDRTHLGAKGAAYFARMVEDELKAVIPAVAREFRAEGQQ

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2643221556 Massilia sp. Root1485 Isolate Unclassified
3 2643221645 Massilia sp. Root351 Isolate Unclassified
4 2643221664 Massilia sp. Root418 Isolate Unclassified
5 2643221684 Massilia sp. Root133 Isolate Unclassified
6 2738541280 Massilia sp. GV090 Isolate Unclassified
7 2738541300 Massilia sp. GV016 Isolate Unclassified
8 2738543018 Massilia sp. GV045 Isolate Unclassified
9 2738543030 Massilia sp. GV097 Isolate Unclassified
10 2842711865 Duganella sp. R-73148 Isolate Unclassified
11 2857553236 Duganella sp. R-74557 Isolate Unclassified
12 2857558681 Duganella sp. R-74565 Isolate Unclassified
13 2904424332 Duganella sp. 1411 Isolate Rhizosphere
14 2919476304 Duganella sp. 3397 Isolate Unclassified
15 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
16 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
17 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
18 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
19 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
24 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
25 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
31 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
32 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
33 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
34 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
35 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
37 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
38 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
42 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
44 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
54 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
55 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
56 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
60 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
66 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
67 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
72 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
73 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
74 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
75 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
76 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
77 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
78 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
79 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
80 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
83 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
84 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
85 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
86 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
87 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
88 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
89 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
90 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
91 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
92 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
93 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
94 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
95 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
96 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
97 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
98 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
99 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
100 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
101 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
102 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
103 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
104 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
105 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
108 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
109 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
110 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
111 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
112 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
113 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
116 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
125 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
126 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
127 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
131 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
142 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
143 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
144 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
148 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
149 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.9
Metatranscriptomes 0
Isolates 5.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.44
Nodule 1.36
Rhizoplane 2.04
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 7.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1000557 3300002738 Bacteria 18388
2 JGI25151J46595_10019176 3300003187 Bacteria 2913
3 Ga0055525_1000069 3300003759 Bacteria 186286
4 Ga0055526_1000255 3300003771 Bacteria 45019
5 Ga0055524_1000029 3300003775 Bacteria 201332
6 Ga0070660_100021799 3300005339 Bacteria 4728
7 Ga0070660_100066761 3300005339 Bacteria 2801
8 Ga0070661_100077378 3300005344 Bacteria 2452
9 Ga0070659_100009826 3300005366 Bacteria 7035
10 Ga0079104_1006669 3300006946 Bacteria 4316
11 Ga0099826_10000003 3300006948 Bacteria 1067817
12 Ga0105244_10052914 3300009036 Bacteria 2065
13 Ga0105242_10169006 3300009176 Bacteria 1920
14 Ga0105238_10185860 3300009551 Bacteria 2054
15 Ga0157373_10150517 3300013100 Bacteria 1637
16 Ga0157371_10000212 3300013102 Bacteria 84700
17 Ga0182008_10019419 3300014497 Bacteria 3509
18 Ga0182006_1000060 3300015261 Bacteria 161773
19 Ga0182007_10033053 3300015262 Bacteria 1755
20 Ga0182005_1000003 3300015265 Bacteria 683269
21 Ga0213872_10000817 3300021361 Bacteria 22567
22 Ga0213872_10002374 3300021361 Bacteria 11144
23 Ga0213872_10023147 3300021361 Bacteria 2859
24 Ga0213872_10025285 3300021361 Bacteria 2730
25 Ga0209563_100007 3300025230 Bacteria 1579402
26 Ga0207425_1000578 3300025245 Bacteria 21492
27 Ga0209646_1000126 3300025246 Bacteria 132815
28 Ga0209677_106972 3300025253 Bacteria 2530
29 Ga0209148_1000595 3300025254 Bacteria 32632
30 Ga0209565_1002311 3300025263 Bacteria 6981
31 Ga0209025_1001104 3300025294 Bacteria 38839
32 Ga0209564_1000032 3300025295 Bacteria 464041
33 Ga0209564_1010626 3300025295 Bacteria 4215
34 Ga0209758_1000343 3300025297 Bacteria 85198
35 Ga0209256_1000013 3300025299 Bacteria 689442
36 Ga0207655_1037733 3300025728 Bacteria 2123
37 Ga0207705_10100423 3300025909 Bacteria 2128
38 Ga0207657_10006839 3300025919 Bacteria 11766
39 Ga0207657_10101577 3300025919 Bacteria 2386
40 Ga0207649_10054097 3300025920 Bacteria 2497
41 Ga0207694_10328591 3300025924 Bacteria 1263
42 Ga0207690_10004621 3300025932 Bacteria 8138
43 Ga0207706_10166952 3300025933 Bacteria 1934
44 Ga0207679_10044715 3300025945 Bacteria 3197
45 Ga0209281_1004102 3300027111 Bacteria 4482
46 Ga0209282_1000002 3300027666 Bacteria 1067825
47 Ga0307515_10007466 3300028794 Bacteria 21602
48 Ga0316181_1211535 3300030744 Bacteria 2318
49 Ga0307408_100000413 3300031548 Bacteria 38417
50 Ga0265314_10044821 3300031711 Bacteria 3131
51 Ga0307518_10015836 3300031838 Bacteria 5400
52 Ga0395899_0001387 3300037312 Bacteria 20784
53 Ga0395899_0003488 3300037312 Bacteria 12462
54 Ga0395899_0005594 3300037312 Bacteria 9743
55 Ga0395899_0029044 3300037312 Bacteria 4160
56 Ga0395900_0000065 3300037418 Bacteria 196327
57 Ga0395900_0000800 3300037418 Bacteria 41597
58 Ga0395900_0007589 3300037418 Bacteria 11201
59 Ga0395900_0010235 3300037418 Bacteria 9591
60 Ga0395900_0287522 3300037418 Bacteria 1634
61 Ga0395900_0376094 3300037418 Bacteria 1389
62 Ga0395898_0006681 3300037466 Bacteria 12299
63 Ga0395898_0013695 3300037466 Bacteria 8343
64 Ga0395905_0010480 3300037471 Bacteria 9015
65 Ga0395905_0114871 3300037471 Bacteria 2530
66 Ga0395905_0667431 3300037471 Bacteria 942
67 Ga0395901_0000114 3300038443 Bacteria 109241
68 Ga0395901_0106596 3300038443 Bacteria 2941
69 Ga0395901_0474072 3300038443 Bacteria 1277
70 Ga0436361_0104337 3300039447 Bacteria 16181
71 Ga0436361_0205274 3300039447 Bacteria 14018
72 Ga0436361_0940452 3300039447 Bacteria 3893
73 Ga0436361_0941038 3300039447 Bacteria 4830
74 Ga0439450_001473 3300042008 Bacteria 3457
75 Ga0450894_015559 3300042131 Bacteria 1008
76 Ga0466969_0038995 3300044656 Bacteria 2388
77 Ga0466965_0000910 3300044683 Bacteria 11333
78 Ga0466961_0096789 3300044693 Bacteria 1861
79 Ga0466964_0071126 3300044706 Bacteria 1471
80 Ga0466971_0178156 3300044719 Bacteria 999
81 Ga0466968_0044953 3300044735 Bacteria 1873
82 Ga0466970_0222383 3300044765 Bacteria 1054
83 Ga0466959_0080709 3300045049 Bacteria 2344
84 Ga0495627_000016 3300046453 Bacteria 318947
85 Ga0495590_0000058 3300046457 Bacteria 93362
86 Ga0495590_0011198 3300046457 Bacteria 3360
87 Ga0495638_0000229 3300046460 Bacteria 76824
88 Ga0495638_0023228 3300046460 Bacteria 4060
89 Ga0495638_0077786 3300046460 Bacteria 2019
90 Ga0495650_0000146 3300046471 Bacteria 163598
91 Ga0495650_0001164 3300046471 Bacteria 28080
92 Ga0495605_0000056 3300046474 Bacteria 155610
93 Ga0495605_0003343 3300046474 Bacteria 9593
94 Ga0495605_0044318 3300046474 Bacteria 2200
95 Ga0495605_0099937 3300046474 Bacteria 1335
96 Ga0495605_0102562 3300046474 Bacteria 1313
97 Ga0495639_0001926 3300046475 Bacteria 9207
98 Ga0495584_0000461 3300046491 Bacteria 28026
99 Ga0495584_0003109 3300046491 Bacteria 9225
100 Ga0495584_0028914 3300046491 Bacteria 2809
101 Ga0495585_0016896 3300046492 Bacteria 4226
102 Ga0495585_0029563 3300046492 Bacteria 3118
103 Ga0495596_0005476 3300046500 Bacteria 5990
104 Ga0495596_0017797 3300046500 Bacteria 2937
105 Ga0495607_0005085 3300046501 Bacteria 9518
106 Ga0495607_0017672 3300046501 Bacteria 4569
107 Ga0495607_0065339 3300046501 Bacteria 2052
108 Ga0495607_0076545 3300046501 Bacteria 1850
109 Ga0495583_0000063 3300046506 Bacteria 194362
110 Ga0495583_0000309 3300046506 Bacteria 77272
111 Ga0495583_0000346 3300046506 Bacteria 73089
112 Ga0495583_0129493 3300046506 Bacteria 1057
113 Ga0495606_0000366 3300046507 Bacteria 77471
114 Ga0495606_0000442 3300046507 Bacteria 68038
115 Ga0495606_0000542 3300046507 Bacteria 60618
116 Ga0495606_0001727 3300046507 Bacteria 28066
117 Ga0495606_0003428 3300046507 Bacteria 16819
118 Ga0495606_0012810 3300046507 Bacteria 6682
119 Ga0495606_0020494 3300046507 Bacteria 4871
120 Ga0495606_0098693 3300046507 Bacteria 1782
121 Ga0495606_0160815 3300046507 Bacteria 1310
122 Ga0495610_0002472 3300046512 Bacteria 15498
123 Ga0495610_0015901 3300046512 Bacteria 4351
124 Ga0495610_0094695 3300046512 Bacteria 1348
125 Ga0495616_0005673 3300046513 Bacteria 7644
126 Ga0495616_0011964 3300046513 Bacteria 4940
127 Ga0495616_0070693 3300046513 Bacteria 1689
128 Ga0495618_0104675 3300046514 Bacteria 1812
129 Ga0495631_0002395 3300046518 Bacteria 10610
130 Ga0495632_0003302 3300046519 Bacteria 11512
131 Ga0495632_0015369 3300046519 Bacteria 4297
132 Ga0495632_0189325 3300046519 Bacteria 940
133 Ga0495643_0000318 3300046522 Bacteria 66545
134 Ga0495643_0000534 3300046522 Bacteria 47409
135 Ga0495643_0012923 3300046522 Bacteria 5019
136 Ga0495643_0020483 3300046522 Bacteria 3811
137 Ga0495644_0000956 3300046523 Bacteria 11946
138 Ga0495644_0001064 3300046523 Bacteria 11435
139 Ga0495644_0002646 3300046523 Bacteria 7117
140 Ga0495644_0007391 3300046523 Bacteria 4240
141 Ga0495648_0000004 3300046524 Bacteria 373639
142 Ga0495648_0003430 3300046524 Bacteria 13931
143 Ga0495648_0021290 3300046524 Bacteria 4494
144 Ga0495648_0031463 3300046524 Bacteria 3492
145 Ga0495663_0001831 3300046525 Bacteria 6560
146 Ga0495642_0001971 3300046528 Bacteria 8616
147 Ga0495642_0012231 3300046528 Bacteria 3307
148 Ga0495642_0097699 3300046528 Bacteria 1247
149 Ga0495654_0004429 3300046530 Bacteria 8335
150 Ga0495609_0000359 3300046538 Bacteria 39545
151 Ga0495609_0000843 3300046538 Bacteria 22639
152 Ga0495609_0013780 3300046538 Bacteria 3811
153 Ga0495609_0014229 3300046538 Bacteria 3744
154 Ga0495609_0048249 3300046538 Bacteria 1903
155 Ga0495609_0077180 3300046538 Bacteria 1459
156 Ga0495597_0000161 3300046542 Bacteria 59525
157 Ga0495597_0000569 3300046542 Bacteria 30649
158 Ga0495597_0014612 3300046542 Bacteria 3735
159 Ga0495622_0000090 3300046557 Bacteria 81752
160 Ga0495622_0000204 3300046557 Bacteria 47081
161 Ga0495633_0000068 3300046558 Bacteria 136733
162 Ga0495633_0009300 3300046558 Bacteria 5440
163 Ga0495633_0081236 3300046558 Bacteria 1508
164 Ga0495656_0001294 3300046615 Bacteria 8142
165 Ga0495656_0014939 3300046615 Bacteria 2921
166 Ga0495656_0043478 3300046615 Unclassified 1887
167 Ga0495668_0000444 3300046616 Bacteria 53002
168 Ga0495668_0004045 3300046616 Bacteria 10666
169 Ga0495668_0004515 3300046616 Bacteria 9847
170 Ga0495668_0027723 3300046616 Bacteria 3209
171 Ga0495668_0096675 3300046616 Bacteria 1616
172 Ga0495611_0000877 3300046648 Bacteria 16373
173 Ga0495611_0001672 3300046648 Bacteria 10755
174 Ga0495611_0002418 3300046648 Bacteria 8557
175 Ga0495611_0004438 3300046648 Bacteria 6072
176 Ga0495611_0006457 3300046648 Bacteria 4996
177 Ga0495625_0000257 3300046660 Bacteria 82608
178 Ga0495625_0001237 3300046660 Bacteria 32251
179 Ga0495625_0009006 3300046660 Bacteria 8431
180 Ga0495625_0011357 3300046660 Bacteria 7270
181 Ga0495625_0013946 3300046660 Bacteria 6435
182 Ga0495625_0183593 3300046660 Bacteria 1389
183 Ga0495659_0000025 3300046664 Bacteria 69322
184 Ga0495659_0001480 3300046664 Bacteria 7960
185 Ga0495661_0006948 3300046665 Bacteria 7910
186 Ga0495661_0008442 3300046665 Bacteria 7123
187 Ga0495661_0057850 3300046665 Bacteria 2313
188 Ga0495661_0134454 3300046665 Bacteria 1351
189 Ga0495661_0165054 3300046665 Bacteria 1185
190 Ga0495661_0223518 3300046665 Bacteria 974
191 Ga0495588_0000098 3300046674 Bacteria 166999
192 Ga0495669_0082217 3300046684 Bacteria 1479
193 Ga0495670_0003406 3300046691 Bacteria 7813
194 Ga0495670_0008075 3300046691 Bacteria 5175
195 Ga0495670_0022466 3300046691 Bacteria 3114
196 Ga0495671_0000238 3300046692 Bacteria 47528
197 Ga0495649_0002063 3300046694 Bacteria 14462
198 Ga0495649_0054936 3300046694 Bacteria 2153
199 Ga0495649_0284787 3300046694 Bacteria 844
200 Ga0495589_0000054 3300046794 Bacteria 111355
201 Ga0495589_0014067 3300046794 Bacteria 4125
202 Ga0495600_0074687 3300046809 Unclassified 2214
203 Ga0495660_0000055 3300046810 Bacteria 134615
204 Ga0495660_0000657 3300046810 Bacteria 26766
205 Ga0495660_0000946 3300046810 Bacteria 21224
206 Ga0495660_0003163 3300046810 Bacteria 10252
207 Ga0495660_0004765 3300046810 Bacteria 8190
208 Ga0495660_0011428 3300046810 Bacteria 5152
209 Ga0495660_0049483 3300046810 Bacteria 2294
210 Ga0495660_0052091 3300046810 Bacteria 2225
211 Ga0495604_0348621 3300047317 Bacteria 984
212 Ga0495636_0000419 3300047318 Bacteria 15770
213 Ga0495674_0054839 3300047319 Bacteria 3498
214 Ga0495672_0000220 3300047320 Bacteria 81547
215 Ga0495672_0002095 3300047320 Bacteria 18690
216 Ga0495672_0004020 3300047320 Bacteria 12300
217 Ga0495672_0004084 3300047320 Bacteria 12171
218 Ga0495672_0007341 3300047320 Bacteria 8311
219 Ga0495672_0011741 3300047320 Bacteria 6159
220 Ga0495672_0026912 3300047320 Bacteria 3662
221 Ga0495672_0159322 3300047320 Bacteria 1162
222 Ga0495683_0003149 3300047323 Bacteria 9645
223 Ga0495683_0013626 3300047323 Bacteria 4248
224 Ga0495683_0064791 3300047323 Bacteria 1804
225 Ga0495687_000016 3300047443 Bacteria 359237
226 Ga0495687_000929 3300047443 Bacteria 30404
227 Ga0495687_000931 3300047443 Bacteria 30356
228 Ga0495687_001095 3300047443 Bacteria 26494
229 Ga0495687_001936 3300047443 Bacteria 17743
230 Ga0495675_0110652 3300047444 Bacteria 1715
231 Ga0495677_0000243 3300047445 Bacteria 24139
232 Ga0495677_0000479 3300047445 Bacteria 17028
233 Ga0495677_0003914 3300047445 Bacteria 5758
234 Ga0495677_0007230 3300047445 Bacteria 4154
235 Ga0495677_0007457 3300047445 Bacteria 4087
236 Ga0495677_0127383 3300047445 Bacteria 973
237 Ga0495685_002866 3300047447 Bacteria 5445
238 Ga0495685_024622 3300047447 Bacteria 2071
239 Ga0495685_072084 3300047447 Bacteria 1156
240 Ga0495673_0000108 3300047469 Bacteria 168459
241 Ga0495673_0000560 3300047469 Bacteria 37956
242 Ga0495673_0005212 3300047469 Bacteria 7904
243 Ga0495681_0009162 3300047470 Bacteria 6125
244 Ga0495681_0044501 3300047470 Bacteria 2133
245 Ga0495681_0143651 3300047470 Bacteria 1006
246 Ga0495684_0091393 3300047471 Bacteria 2305
247 Ga0495686_0207197 3300047472 Bacteria 1122
248 Ga0495615_0000172 3300048090 Bacteria 16031
249 Ga0495626_0000053 3300048091 Bacteria 155543
250 Ga0495626_0005427 3300048091 Bacteria 7471
251 Ga0495626_0082636 3300048091 Bacteria 1424
252 Ga0495626_0099088 3300048091 Unclassified 1272
253 Ga0496102_0000101 3300048905 Bacteria 123198
254 Ga0496103_0002577 3300048906 Bacteria 11351
255 Ga0496104_0246040 3300048907 Bacteria 1701
256 Ga0496106_0011420 3300048909 Bacteria 6571
257 Ga0496113_0008391 3300048916 Bacteria 6730
258 Ga0496113_0073440 3300048916 Bacteria 2606
259 Ga0496116_0009841 3300048919 Bacteria 8096
260 Ga0496122_0001680 3300048925 Bacteria 34300
261 Ga0496124_0018006 3300048927 Bacteria 6635
262 Ga0496124_0035651 3300048927 Bacteria 4351
263 Ga0496124_0039378 3300048927 Bacteria 4098
264 Ga0496124_0410130 3300048927 Bacteria 937
265 Ga0496125_0204027 3300048928 Bacteria 1291
266 Ga0495678_000001 3300049459 Bacteria 1060340
267 Ga0495678_000189 3300049459 Bacteria 72122
268 Ga0495678_001960 3300049459 Bacteria 14843
269 Ga0495678_003275 3300049459 Bacteria 10115
270 Ga0495678_003563 3300049459 Bacteria 9542
271 Ga0495678_007115 3300049459 Bacteria 5849
272 Ga0495682_0001024 3300049460 Bacteria 16542
273 Ga0495682_0023840 3300049460 Bacteria 2283
274 Ga0501238_004995 3300049671 Bacteria 1671
275 Ga0501269_000370 3300049766 Bacteria 11086
276 Ga0501035_0001376 3300049822 Bacteria 25006
277 Ga0501044_0208576 3300049823 Bacteria 1909
278 Ga0500577_0040767 3300053142 Bacteria 1690
279 Ga0500586_000066 3300053145 Bacteria 18574

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046507 Ga0495606_0012810 Ga0495606_0012810_5977_6645 220
2 3300049460 Ga0495682_0023840 Ga0495682_0023840_1574_2242 220
3 3300046528 Ga0495642_0097699 Ga0495642_0097699_381_1151 230
4 3300046507 Ga0495606_0020494 Ga0495606_0020494_2568_3356 231
5 3300046542 Ga0495597_0014612 Ga0495597_0014612_2055_2843 231
6 3300047447 Ga0495685_072084 Ga0495685_072084_103_837 232
7 3300047469 Ga0495673_0000108 Ga0495673_0000108_133839_134708 232
8 3300014497 Ga0182008_10019419 Ga0182008_100194194 234
9 3300046512 Ga0495610_0015901 Ga0495610_0015901_37_741 234
10 3300048927 Ga0496124_0018006 Ga0496124_0018006_3048_3776 235
11 3300028794 Ga0307515_10007466 Ga0307515_100074662 236
12 3300046460 Ga0495638_0023228 Ga0495638_0023228_1336_2127 236
13 3300049766 Ga0501269_000370 Ga0501269_000370_4540_5256 236
14 3300013102 Ga0157371_10000212 Ga0157371_1000021265 237
15 3300046474 Ga0495605_0099937 Ga0495605_0099937_511_1284 237
16 3300047445 Ga0495677_0000243 Ga0495677_0000243_14513_15301 237
17 3300048091 Ga0495626_0005427 Ga0495626_0005427_3397_4170 237
18 3300046507 Ga0495606_0003428 Ga0495606_0003428_4386_5177 238
19 3300046538 Ga0495609_0013780 Ga0495609_0013780_818_1690 238
20 3300046664 Ga0495659_0000025 Ga0495659_0000025_32845_33714 238
21 3300046692 Ga0495671_0000238 Ga0495671_0000238_14046_14915 238
22 3300047320 Ga0495672_0004020 Ga0495672_0004020_6719_7588 238
23 3300053142 Ga0500577_0040767 Ga0500577_0040767_704_1573 238
24 3300046492 Ga0495585_0029563 Ga0495585_0029563_2012_2830 239
25 3300046507 Ga0495606_0160815 Ga0495606_0160815_28_795 239
26 3300046523 Ga0495644_0000956 Ga0495644_0000956_2012_2830 239
27 3300046615 Ga0495656_0014939 Ga0495656_0014939_1239_2057 239
28 3300046648 Ga0495611_0000877 Ga0495611_0000877_12610_13428 239
29 3300047445 Ga0495677_0003914 Ga0495677_0003914_2954_3772 239
30 3300046507 Ga0495606_0000366 Ga0495606_0000366_28051_28881 240
31 3300046514 Ga0495618_0104675 Ga0495618_0104675_765_1532 240
32 3300046660 Ga0495625_0001237 Ga0495625_0001237_24378_25268 240
33 3300046665 Ga0495661_0223518 Ga0495661_0223518_22_813 240
34 3300046674 Ga0495588_0000098 Ga0495588_0000098_141856_142650 240
35 3300046809 Ga0495600_0074687 Ga0495600_0074687_47_814 240
36 3300046810 Ga0495660_0011428 Ga0495660_0011428_2973_3863 240
37 3300047317 Ga0495604_0348621 Ga0495604_0348621_58_825 240
38 3300047319 Ga0495674_0054839 Ga0495674_0054839_2594_3361 240
39 3300047444 Ga0495675_0110652 Ga0495675_0110652_760_1527 240
40 3300047471 Ga0495684_0091393 Ga0495684_0091393_1054_1821 240
41 3300047472 Ga0495686_0207197 Ga0495686_0207197_85_834 240
42 3300009176 Ga0105242_10169006 Ga0105242_101690062 241
43 3300031838 Ga0307518_10015836 Ga0307518_100158363 241
44 3300044706 Ga0466964_0071126 Ga0466964_0071126_665_1432 241
45 3300046524 Ga0495648_0021290 Ga0495648_0021290_2949_3755 241
46 3300046660 Ga0495625_0183593 Ga0495625_0183593_415_1239 241
47 3300046665 Ga0495661_0008442 Ga0495661_0008442_5733_6539 241
48 3300046694 Ga0495649_0284787 Ga0495649_0284787_19_756 241
49 3300047320 Ga0495672_0004084 Ga0495672_0004084_2447_3271 241
50 3300037418 Ga0395900_0287522 Ga0395900_0287522_579_1358 242
51 3300037471 Ga0395905_0114871 Ga0395905_0114871_1731_2510 242
52 3300044683 Ga0466965_0000910 Ga0466965_0000910_5558_6355 242
53 3300044735 Ga0466968_0044953 Ga0466968_0044953_614_1411 242
54 3300046471 Ga0495650_0000146 Ga0495650_0000146_97823_98566 243
55 3300046507 Ga0495606_0000442 Ga0495606_0000442_27616_28359 243
56 3300046513 Ga0495616_0005673 Ga0495616_0005673_4965_5789 243
57 3300047320 Ga0495672_0026912 Ga0495672_0026912_2447_3271 243
58 3300047323 Ga0495683_0003149 Ga0495683_0003149_533_1357 243
59 3300047469 Ga0495673_0005212 Ga0495673_0005212_3265_4089 243
60 3300013100 Ga0157373_10150517 Ga0157373_101505172 244
61 3300046457 Ga0495590_0011198 Ga0495590_0011198_2510_3334 244
62 3300046474 Ga0495605_0044318 Ga0495605_0044318_533_1357 244
63 3300046506 Ga0495583_0000063 Ga0495583_0000063_183295_184119 244
64 3300046523 Ga0495644_0001064 Ga0495644_0001064_2012_2836 244
65 3300046524 Ga0495648_0003430 Ga0495648_0003430_4928_5752 244
66 3300046538 Ga0495609_0000843 Ga0495609_0000843_14517_15341 244
67 3300046615 Ga0495656_0001294 Ga0495656_0001294_2955_3779 244
68 3300046648 Ga0495611_0001672 Ga0495611_0001672_7935_8759 244
69 3300046664 Ga0495659_0001480 Ga0495659_0001480_4403_5227 244
70 3300046691 Ga0495670_0003406 Ga0495670_0003406_267_1091 244
71 3300047318 Ga0495636_0000419 Ga0495636_0000419_13986_14810 244
72 3300047443 Ga0495687_001095 Ga0495687_001095_7674_8498 244
73 3300047445 Ga0495677_0007457 Ga0495677_0007457_1993_2817 244
74 3300047447 Ga0495685_002866 Ga0495685_002866_4294_5118 244
75 3300049459 Ga0495678_001960 Ga0495678_001960_10707_11531 244
76 3300049460 Ga0495682_0001024 Ga0495682_0001024_9236_10060 244
77 3300044656 Ga0466969_0038995 Ga0466969_0038995_160_951 245
78 3300044765 Ga0466970_0222383 Ga0466970_0222383_199_990 245
79 3300046512 Ga0495610_0002472 Ga0495610_0002472_11338_12135 245
80 3300046522 Ga0495643_0000318 Ga0495643_0000318_24060_24857 245
81 3300046524 Ga0495648_0031463 Ga0495648_0031463_1349_2146 245
82 3300047320 Ga0495672_0011741 Ga0495672_0011741_189_986 245
83 3300047445 Ga0495677_0127383 Ga0495677_0127383_141_938 245
84 3300049459 Ga0495678_000189 Ga0495678_000189_49694_50491 245
85 3300046660 Ga0495625_0009006 Ga0495625_0009006_3467_4252 247
86 3300047470 Ga0495681_0009162 Ga0495681_0009162_13_771 247
87 3300044693 Ga0466961_0096789 Ga0466961_0096789_53_829 248
88 3300046519 Ga0495632_0189325 Ga0495632_0189325_156_908 248
89 3300046557 Ga0495622_0000090 Ga0495622_0000090_27936_28772 248
90 3300044719 Ga0466971_0178156 Ga0466971_0178156_192_947 249
91 3300046474 Ga0495605_0102562 Ga0495605_0102562_437_1210 249
92 3300046491 Ga0495584_0000461 Ga0495584_0000461_16646_17479 249
93 3300046491 Ga0495584_0028914 Ga0495584_0028914_1960_2733 249
94 3300046500 Ga0495596_0017797 Ga0495596_0017797_2034_2807 249
95 3300046501 Ga0495607_0076545 Ga0495607_0076545_555_1373 249
96 3300046519 Ga0495632_0015369 Ga0495632_0015369_2114_2887 249
97 3300046522 Ga0495643_0020483 Ga0495643_0020483_586_1359 249
98 3300046538 Ga0495609_0014229 Ga0495609_0014229_416_1189 249
99 3300046616 Ga0495668_0027723 Ga0495668_0027723_751_1524 249
100 3300046648 Ga0495611_0002418 Ga0495611_0002418_4973_5746 249
101 3300046660 Ga0495625_0013946 Ga0495625_0013946_4339_5112 249
102 3300046665 Ga0495661_0057850 Ga0495661_0057850_575_1393 249
103 3300046665 Ga0495661_0165054 Ga0495661_0165054_358_1131 249
104 3300046810 Ga0495660_0000657 Ga0495660_0000657_24460_25329 249
105 3300047323 Ga0495683_0064791 Ga0495683_0064791_768_1541 249
106 3300047445 Ga0495677_0007230 Ga0495677_0007230_131_904 249
107 3300047447 Ga0495685_024622 Ga0495685_024622_186_959 249
108 3300048091 Ga0495626_0099088 Ga0495626_0099088_307_1080 249
109 3300048916 Ga0496113_0073440 Ga0496113_0073440_785_1591 249
110 iso_pu_bacteria 2510917020 2511121872 249
111 3300025924 Ga0207694_10328591 Ga0207694_103285912 251
112 3300046460 Ga0495638_0077786 Ga0495638_0077786_732_1568 251
113 3300046492 Ga0495585_0016896 Ga0495585_0016896_2401_3234 251
114 3300046501 Ga0495607_0065339 Ga0495607_0065339_758_1591 251
115 3300046513 Ga0495616_0011964 Ga0495616_0011964_3585_4418 251
116 3300046558 Ga0495633_0009300 Ga0495633_0009300_3631_4464 251
117 3300046648 Ga0495611_0006457 Ga0495611_0006457_3237_4070 251
118 3300046691 Ga0495670_0008075 Ga0495670_0008075_1545_2378 251
119 3300048909 Ga0496106_0011420 Ga0496106_0011420_477_1280 251
120 3300005339 Ga0070660_100021799 Ga0070660_1000217992 252
121 3300005344 Ga0070661_100077378 Ga0070661_1000773782 252
122 3300009551 Ga0105238_10185860 Ga0105238_101858602 252
123 3300021361 Ga0213872_10002374 Ga0213872_100023743 252
124 3300025919 Ga0207657_10006839 Ga0207657_1000683911 252
125 3300025920 Ga0207649_10054097 Ga0207649_100540972 252
126 3300025945 Ga0207679_10044715 Ga0207679_100447152 252
127 3300039447 Ga0436361_0205274 Ga0436361_0205274_5468_6280 252
128 3300046500 Ga0495596_0005476 Ga0495596_0005476_5112_5885 252
129 3300046501 Ga0495607_0017672 Ga0495607_0017672_216_989 252
130 3300046506 Ga0495583_0000309 Ga0495583_0000309_67656_68429 252
131 3300046507 Ga0495606_0098693 Ga0495606_0098693_163_936 252
132 3300046518 Ga0495631_0002395 Ga0495631_0002395_4220_4993 252
133 3300046519 Ga0495632_0003302 Ga0495632_0003302_8692_9465 252
134 3300046523 Ga0495644_0002646 Ga0495644_0002646_464_1237 252
135 3300046538 Ga0495609_0077180 Ga0495609_0077180_627_1400 252
136 3300046558 Ga0495633_0081236 Ga0495633_0081236_334_1200 252
137 3300046648 Ga0495611_0004438 Ga0495611_0004438_4530_5303 252
138 3300046684 Ga0495669_0082217 Ga0495669_0082217_637_1410 252
139 3300046794 Ga0495589_0014067 Ga0495589_0014067_2039_2812 252
140 3300046810 Ga0495660_0004765 Ga0495660_0004765_180_953 252
141 3300047320 Ga0495672_0000220 Ga0495672_0000220_59842_60633 252
142 3300048091 Ga0495626_0082636 Ga0495626_0082636_120_893 252
143 3300048905 Ga0496102_0000101 Ga0496102_0000101_100842_101621 252
144 3300048919 Ga0496116_0009841 Ga0496116_0009841_2275_3090 252
145 3300049459 Ga0495678_007115 Ga0495678_007115_540_1313 252
146 3300003775 Ga0055524_1000029 Ga0055524_100002988 253
147 3300006948 Ga0099826_10000003 Ga0099826_10000003511 253
148 3300025263 Ga0209565_1002311 Ga0209565_10023115 253
149 3300025295 Ga0209564_1010626 Ga0209564_10106262 253
150 3300025299 Ga0209256_1000013 Ga0209256_1000013115 253
151 3300027666 Ga0209282_1000002 Ga0209282_1000002487 253
152 3300046694 Ga0495649_0054936 Ga0495649_0054936_1166_1945 253
153 3300046810 Ga0495660_0052091 Ga0495660_0052091_363_1142 253
154 3300048906 Ga0496103_0002577 Ga0496103_0002577_5699_6559 253
155 3300049671 Ga0501238_004995 Ga0501238_004995_713_1498 253
156 3300046506 Ga0495583_0129493 Ga0495583_0129493_235_1011 254
157 3300046512 Ga0495610_0094695 Ga0495610_0094695_104_973 254
158 3300046665 Ga0495661_0134454 Ga0495661_0134454_313_1089 254
159 3300047470 Ga0495681_0044501 Ga0495681_0044501_681_1457 254
160 iso_pu_bacteria 2643221556 2643800631 254
161 iso_pu_bacteria 2643221684 2644470860 254
162 iso_pu_bacteria 8047673197 8047677510 254
163 3300003759 Ga0055525_1000069 Ga0055525_100006931 255
164 3300025230 Ga0209563_100007 Ga0209563_10000733 255
165 3300025253 Ga0209677_106972 Ga0209677_1069722 255
166 3300025909 Ga0207705_10100423 Ga0207705_101004232 255
167 3300025933 Ga0207706_10166952 Ga0207706_101669522 255
168 3300031711 Ga0265314_10044821 Ga0265314_100448211 255
169 3300037312 Ga0395899_0005594 Ga0395899_0005594_3337_4113 255
170 3300037418 Ga0395900_0000800 Ga0395900_0000800_28349_29125 255
171 3300037418 Ga0395900_0376094 Ga0395900_0376094_217_993 255
172 3300037471 Ga0395905_0667431 Ga0395905_0667431_139_915 255
173 3300038443 Ga0395901_0474072 Ga0395901_0474072_38_814 255
174 3300042008 Ga0439450_001473 Ga0439450_001473_393_1211 255
175 3300045049 Ga0466959_0080709 Ga0466959_0080709_1189_1965 255
176 3300046528 Ga0495642_0001971 Ga0495642_0001971_1154_1930 255
177 3300046616 Ga0495668_0096675 Ga0495668_0096675_689_1465 255
178 3300047323 Ga0495683_0013626 Ga0495683_0013626_3328_4116 255
179 3300048907 Ga0496104_0246040 Ga0496104_0246040_33_809 255
180 3300048916 Ga0496113_0008391 Ga0496113_0008391_80_856 255
181 3300048925 Ga0496122_0001680 Ga0496122_0001680_23360_24136 255
182 3300048927 Ga0496124_0035651 Ga0496124_0035651_1353_2195 255
183 3300048927 Ga0496124_0410130 Ga0496124_0410130_37_813 255
184 3300048928 Ga0496125_0204027 Ga0496125_0204027_493_1269 255
185 3300053145 Ga0500586_000066 Ga0500586_000066_2846_3643 255
186 iso_pu_bacteria 2919476304 2919479278 255
187 3300005339 Ga0070660_100066761 Ga0070660_1000667613 256
188 3300005366 Ga0070659_100009826 Ga0070659_1000098265 256
189 3300025254 Ga0209148_1000595 Ga0209148_100059511 256
190 3300025919 Ga0207657_10101577 Ga0207657_101015772 256
191 3300025932 Ga0207690_10004621 Ga0207690_100046215 256
192 3300037312 Ga0395899_0001387 Ga0395899_0001387_12258_13091 256
193 3300037312 Ga0395899_0003488 Ga0395899_0003488_4853_5674 256
194 3300037312 Ga0395899_0029044 Ga0395899_0029044_2655_3488 256
195 3300037418 Ga0395900_0000065 Ga0395900_0000065_145120_145941 256
196 3300037418 Ga0395900_0007589 Ga0395900_0007589_5680_6513 256
197 3300037418 Ga0395900_0010235 Ga0395900_0010235_7579_8400 256
198 3300037466 Ga0395898_0006681 Ga0395898_0006681_279_1100 256
199 3300037466 Ga0395898_0013695 Ga0395898_0013695_5558_6391 256
200 3300037471 Ga0395905_0010480 Ga0395905_0010480_1407_2228 256
201 3300038443 Ga0395901_0000114 Ga0395901_0000114_80809_81630 256
202 3300038443 Ga0395901_0106596 Ga0395901_0106596_1412_2245 256
203 3300042131 Ga0450894_015559 Ga0450894_015559_29_850 256
204 3300046474 Ga0495605_0000056 Ga0495605_0000056_26974_27771 256
205 3300046474 Ga0495605_0003343 Ga0495605_0003343_8393_9172 256
206 3300046491 Ga0495584_0003109 Ga0495584_0003109_4820_5599 256
207 3300046507 Ga0495606_0001727 Ga0495606_0001727_13919_14707 256
208 3300046522 Ga0495643_0012923 Ga0495643_0012923_3065_3862 256
209 3300046525 Ga0495663_0001831 Ga0495663_0001831_5271_6062 256
210 3300046530 Ga0495654_0004429 Ga0495654_0004429_5015_5794 256
211 3300046542 Ga0495597_0000569 Ga0495597_0000569_12281_13060 256
212 3300046615 Ga0495656_0043478 Ga0495656_0043478_482_1273 256
213 3300046616 Ga0495668_0004045 Ga0495668_0004045_4229_5008 256
214 3300046691 Ga0495670_0022466 Ga0495670_0022466_1520_2305 256
215 3300046794 Ga0495589_0000054 Ga0495589_0000054_64315_65112 256
216 3300046810 Ga0495660_0000055 Ga0495660_0000055_127648_128445 256
217 3300047320 Ga0495672_0002095 Ga0495672_0002095_6858_7655 256
218 3300047320 Ga0495672_0007341 Ga0495672_0007341_2509_3288 256
219 3300047320 Ga0495672_0159322 Ga0495672_0159322_51_836 256
220 3300047443 Ga0495687_000929 Ga0495687_000929_27099_27896 256
221 3300047445 Ga0495677_0000479 Ga0495677_0000479_8819_9616 256
222 3300048090 Ga0495615_0000172 Ga0495615_0000172_7760_8551 256
223 3300048091 Ga0495626_0000053 Ga0495626_0000053_27099_27896 256
224 3300049822 Ga0501035_0001376 Ga0501035_0001376_6561_7382 256
225 3300049823 Ga0501044_0208576 Ga0501044_0208576_841_1662 256
226 3300046538 Ga0495609_0000359 Ga0495609_0000359_21537_22352 257
227 3300046810 Ga0495660_0003163 Ga0495660_0003163_995_1810 257
228 iso_pu_bacteria 2904424332 2904429496 257
229 3300003187 JGI25151J46595_10019176 JGI25151J46595_100191762 258
230 3300006946 Ga0079104_1006669 Ga0079104_10066692 258
231 3300015261 Ga0182006_1000060 Ga0182006_100006016 258
232 3300015262 Ga0182007_10033053 Ga0182007_100330532 258
233 3300015265 Ga0182005_1000003 Ga0182005_1000003511 258
234 3300021361 Ga0213872_10025285 Ga0213872_100252852 258
235 3300025245 Ga0207425_1000578 Ga0207425_100057815 258
236 3300025294 Ga0209025_1001104 Ga0209025_10011043 258
237 3300025297 Ga0209758_1000343 Ga0209758_10003433 258
238 3300027111 Ga0209281_1004102 Ga0209281_10041022 258
239 3300031548 Ga0307408_100000413 Ga0307408_10000041319 258
240 3300039447 Ga0436361_0940452 Ga0436361_0940452_2047_2841 258
241 3300046513 Ga0495616_0070693 Ga0495616_0070693_796_1590 258
242 3300046616 Ga0495668_0004515 Ga0495668_0004515_1359_2141 258
243 3300046665 Ga0495661_0006948 Ga0495661_0006948_4544_5338 258
244 3300047443 Ga0495687_000016 Ga0495687_000016_255388_256182 258
245 3300048927 Ga0496124_0039378 Ga0496124_0039378_3117_3899 258
246 iso_pu_bacteria 2842711865 2842713132 258
247 iso_pu_bacteria 2857558681 2857561874 258
248 3300021361 Ga0213872_10000817 Ga0213872_1000081723 259
249 3300021361 Ga0213872_10023147 Ga0213872_100231472 259
250 3300039447 Ga0436361_0104337 Ga0436361_0104337_6655_7455 259
251 3300047469 Ga0495673_0000560 Ga0495673_0000560_17799_18596 259
252 iso_pu_bacteria 2857553236 2857555675 259
253 3300047470 Ga0495681_0143651 Ga0495681_0143651_88_891 260
254 3300049459 Ga0495678_000001 Ga0495678_000001_633229_634062 260
255 3300009036 Ga0105244_10052914 Ga0105244_100529142 261
256 3300025728 Ga0207655_1037733 Ga0207655_10377333 261
257 3300030744 Ga0316181_1211535 Ga0316181_12115352 261
258 3300039447 Ga0436361_0941038 Ga0436361_0941038_3363_4214 261
259 3300046453 Ga0495627_000016 Ga0495627_000016_212359_213174 262
260 3300046523 Ga0495644_0007391 Ga0495644_0007391_1477_2292 262
261 3300046694 Ga0495649_0002063 Ga0495649_0002063_2707_3507 262
262 3300046810 Ga0495660_0000946 Ga0495660_0000946_999_1814 262
263 3300002738 JGI25154J39366_1000557 JGI25154J39366_10005576 263
264 3300003771 Ga0055526_1000255 Ga0055526_100025525 263
265 3300025246 Ga0209646_1000126 Ga0209646_100012680 263
266 3300025295 Ga0209564_1000032 Ga0209564_1000032397 263
267 3300046457 Ga0495590_0000058 Ga0495590_0000058_54677_55483 263
268 3300046460 Ga0495638_0000229 Ga0495638_0000229_48623_49429 263
269 3300046471 Ga0495650_0001164 Ga0495650_0001164_26413_27219 263
270 3300046475 Ga0495639_0001926 Ga0495639_0001926_6900_7706 263
271 3300046501 Ga0495607_0005085 Ga0495607_0005085_6927_7721 263
272 3300046506 Ga0495583_0000346 Ga0495583_0000346_26496_27302 263
273 3300046507 Ga0495606_0000542 Ga0495606_0000542_25666_26460 263
274 3300046522 Ga0495643_0000534 Ga0495643_0000534_28555_29361 263
275 3300046524 Ga0495648_0000004 Ga0495648_0000004_134701_135507 263
276 3300046528 Ga0495642_0012231 Ga0495642_0012231_1187_1993 263
277 3300046538 Ga0495609_0048249 Ga0495609_0048249_15_821 263
278 3300046542 Ga0495597_0000161 Ga0495597_0000161_40091_40897 263
279 3300046557 Ga0495622_0000204 Ga0495622_0000204_18283_19089 263
280 3300046558 Ga0495633_0000068 Ga0495633_0000068_94371_95177 263
281 3300046616 Ga0495668_0000444 Ga0495668_0000444_21137_21943 263
282 3300046660 Ga0495625_0000257 Ga0495625_0000257_35848_36654 263
283 3300046660 Ga0495625_0011357 Ga0495625_0011357_2799_3617 263
284 3300046810 Ga0495660_0049483 Ga0495660_0049483_608_1414 263
285 3300047443 Ga0495687_000931 Ga0495687_000931_29305_30111 263
286 3300047443 Ga0495687_001936 Ga0495687_001936_16693_17499 263
287 3300049459 Ga0495678_003275 Ga0495678_003275_1892_2698 263
288 3300049459 Ga0495678_003563 Ga0495678_003563_8687_9493 263
289 iso_pu_bacteria 2643221645 2644249804 263
290 iso_pu_bacteria 2643221664 2644358475 263
291 iso_pu_bacteria 2738541280 2738739412 263
292 iso_pu_bacteria 2738541300 2738846615 263
293 iso_pu_bacteria 2738543018 2739275862 263
294 iso_pu_bacteria 2738543030 2739344906 263

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00657

Lipase_GDSL

GDSL-like Lipase/Acylhydrolase

40

271

0.82

PF13472

Lipase_GDSL_2

GDSL-like Lipase/Acylhydrolase family

42

216

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c1u-assembly1.cif.gz_A d192n mutant of rhamnogalacturonan acetylesterase 0.7793 29 246
2o14-assembly1.cif.gz_A x-ray crystal structure of protein yxim_bacsu from bacillus subtilis. northeast structural genomics consortium target sr595 0.7787 24 248
1pp4-assembly2.cif.gz_B the crystal structure of rhamnogalacturonan acetylesterase in space group p3121 0.7566 29 259
1pp4-assembly2.cif.gz_B the crystal structure of rhamnogalacturonan acetylesterase in space group p3121 0.726 29 259
6lfc-assembly2.cif.gz_B e. coli thioesterase i mutant dg 0.7223 29 175
ID Description Score Start End Superfamily
3c1uA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7788 29 259 3.40.50.1110
2o14A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7653 29 248 3.40.50.1110
af_A0A0P0XIW7_1_112_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7491 113 186 3.40.50.1110
3c1uA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7473 29 259 3.40.50.1110
2o14A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7373 29 248 3.40.50.1110
ID Description Score Start End GO Terms
AF-A0A4Q6GLH9-F1-model_v4 Rhamnogalacturonan acetylesterase 0.9847 22 258 GO:0052689
AF-A0A6M4GWU2-F1-model_v4 Lysophospholipase L1-like esterase 0.9619 41 261 GO:0030599
GO:0042545
AF-A0A4P6L6D6-F1-model_v4 Rhamnogalacturonan acetylesterase 0.9582 23 258 GO:0052689
AF-A0A135S2T9-F1-model_v4 SGNH hydrolase-type esterase domain-containing protein 0.9548 26 262 GO:0016787
AF-A0A2R7LN04-F1-model_v4 Lysophospholipase 0.9543 23 210 GO:0052689

Feature Viewer

pLDDT pTM Quality
87.59 0.83 High
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Predicted Structure (AlphaFold2)

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