F391932

General Info

Members Datasets Scaffolds Average Seq Length
294 200 272 345

Family's Representative Sequence

Representative Sequence 3300005366|Ga0070659_100025615|Ga0070659_1000256153
Length 393
Sequence MTSVMGRFVKLFLSMDRFMACLIAVVVTASLLPARGWAASWTDVLAKLAIALLFFLHGARLSRAAIIQGAGNWRLHAATLGSTYILFPAAGLAIVWLVGGTVNPLLLSGLLYLTLLPSTVQSSIAFTAMARGNVAAAVCSASLSNLAGIILTPMLVGLVMKVSGSAGVSASHSIGTIALQLLLPFLAGHLLRPLIGGFIDRNKAILLPVDRGSILLVVYSAFSAAVINGIWTRVGWLDLLTLLALSAVMLGVVMGVNLLVARLAHLPREDAIVLLFCGSKKSLVSGVPMAGALFPPAHVGLIVLPLMIFHQLQLFVCAALAARFGRQAEQDDALAADRSDVGTSRVPRTEGEIVNAAATLGFRVPDACMPGIVANLAVLDGHAETLRGSSAGR

Samples

Sample ID Description Type Environment
1 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
2 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
3 2643221647 Streptomyces sp. Root369 Isolate Unclassified
4 2643221658 Variovorax sp. Root411 Isolate Unclassified
5 2643221672 Variovorax sp. Root434 Isolate Unclassified
6 2738541277 Variovorax sp. GV051 Isolate Unclassified
7 2738541307 Variovorax sp. GV008 Isolate Unclassified
8 2738543019 Variovorax sp. GV040 Isolate Unclassified
9 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
10 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
11 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
12 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
13 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
14 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
15 2896184354 Aurantiacibacter suaedae GH3-15 Isolate Rhizosphere
16 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
17 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
18 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
19 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
20 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
21 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
22 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
23 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
24 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
27 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
28 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
29 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
30 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
31 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
32 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
33 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
34 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
35 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
36 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
37 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
38 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
39 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
40 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
55 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
68 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
69 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
70 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
74 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
79 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
110 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
114 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
115 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
116 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
117 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
118 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
119 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
120 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
121 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
122 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
123 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
124 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
125 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
126 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
130 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
133 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
134 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
135 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
136 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
137 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
138 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
139 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
140 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
141 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
142 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
143 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
146 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
147 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
148 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
149 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
150 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
151 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
152 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
153 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
154 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
155 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
156 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
157 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
163 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
164 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
165 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
168 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
169 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
170 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
171 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
172 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
179 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
180 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
181 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
182 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
183 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
184 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
185 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
186 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
187 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
188 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
189 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
190 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
191 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
192 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
193 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
194 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
195 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
196 8011350971 Pseudomonas sp. 30_B Isolate Rhizosphere
197 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
198 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
199 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere
200 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.52
Metatranscriptomes 0
Isolates 7.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.31
Nodule 0.34
Rhizoplane 2.38
Rhizosphere 67.69
Stem 0
Stem Tuber 0
Unclassified 14.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24749J21850_1000001 3300002076 Bacteria 67089
2 JGI24751J29686_10000086 3300002459 Bacteria 52241
3 JGI25164J39214_1003927 3300002772 Bacteria 1783
4 JGI25165J46597_1000038 3300003214 Bacteria 283664
5 JGI25153J46596_10000005 3300003215 Bacteria 492839
6 rootH2_10004658 3300003320 Bacteria 42523
7 rootH2_10021803 3300003320 Bacteria 4247
8 rootH1_10080270 3300003323 Bacteria 5565
9 Ga0055526_1001417 3300003771 Bacteria 17061
10 Ga0055537_1000723 3300003773 Bacteria 17061
11 Ga0055524_1000393 3300003775 Bacteria 37606
12 Ga0055534_1000673 3300003784 Bacteria 17061
13 Ga0055528_1001159 3300003790 Bacteria 17061
14 Ga0065704_10081887 3300005289 Bacteria 3687
15 Ga0065707_10084403 3300005295 Bacteria 7235
16 Ga0070670_100000003 3300005331 Bacteria 529510
17 Ga0070670_100107166 3300005331 Bacteria 2408
18 Ga0070666_10008732 3300005335 Bacteria 6299
19 Ga0070666_10096862 3300005335 Bacteria 2031
20 Ga0070689_100058363 3300005340 Bacteria 2997
21 Ga0070668_100000003 3300005347 Bacteria 195738
22 Ga0070668_100008702 3300005347 Bacteria 7538
23 Ga0070668_100049710 3300005347 Bacteria 3226
24 Ga0070669_100000084 3300005353 Bacteria 91046
25 Ga0070669_100000393 3300005353 Bacteria 33445
26 Ga0070671_100000061 3300005355 Bacteria 73646
27 Ga0070659_100025615 3300005366 Bacteria 4532
28 Ga0070667_100000035 3300005367 Bacteria 173461
29 Ga0070667_100000174 3300005367 Bacteria 79730
30 Ga0070667_100000453 3300005367 Bacteria 42432
31 Ga0070713_100054291 3300005436 Bacteria 3324
32 Ga0070662_100020516 3300005457 Bacteria 4500
33 Ga0070672_100012860 3300005543 Bacteria 5896
34 Ga0070672_100290657 3300005543 Bacteria 1384
35 Ga0070665_100000150 3300005548 Bacteria 127885
36 Ga0068855_100000029 3300005563 Bacteria 171278
37 Ga0068857_100032196 3300005577 Bacteria 4636
38 Ga0068857_100086378 3300005577 Bacteria 2805
39 Ga0068852_100136330 3300005616 Bacteria 2267
40 Ga0068859_100002830 3300005617 Bacteria 17598
41 Ga0068859_100251682 3300005617 Bacteria 1857
42 Ga0068864_100000005 3300005618 Bacteria 400840
43 Ga0068861_100031699 3300005719 Bacteria 3885
44 Ga0068861_100032263 3300005719 Bacteria 3854
45 Ga0068863_100001506 3300005841 Bacteria 23038
46 Ga0068863_100008711 3300005841 Bacteria 9911
47 Ga0068858_100001677 3300005842 Bacteria 22643
48 Ga0068860_100000106 3300005843 Bacteria 133556
49 Ga0068860_100000125 3300005843 Bacteria 123363
50 Ga0068862_100000001 3300005844 Bacteria 523031
51 Ga0068862_100002586 3300005844 Bacteria 15984
52 Ga0075366_10006177 3300006195 Bacteria 6538
53 Ga0075366_10016458 3300006195 Bacteria 4251
54 Ga0075370_10017118 3300006353 Bacteria 3912
55 Ga0075370_10043603 3300006353 Bacteria 2535
56 Ga0075370_10047506 3300006353 Bacteria 2431
57 Ga0097620_100002830 3300006931 Bacteria 17598
58 Ga0097620_100251672 3300006931 Bacteria 1857
59 Ga0105251_10000694 3300009011 Bacteria 31101
60 Ga0105240_10000434 3300009093 Bacteria 77370
61 Ga0105240_10001295 3300009093 Bacteria 43234
62 Ga0105240_10103477 3300009093 Bacteria 3459
63 Ga0105247_10029903 3300009101 Bacteria 3302
64 Ga0105248_10000222 3300009177 Bacteria 65122
65 Ga0105248_10008755 3300009177 Bacteria 11112
66 Ga0105248_10016340 3300009177 Bacteria 8168
67 Ga0105237_10068900 3300009545 Bacteria 3532
68 Ga0105237_10140303 3300009545 Bacteria 2411
69 Ga0105238_10060863 3300009551 Bacteria 3779
70 Ga0105249_10117042 3300009553 Bacteria 2527
71 Ga0105249_10119471 3300009553 Bacteria 2503
72 Ga0105249_10219298 3300009553 Bacteria 1871
73 Ga0105239_10000354 3300010375 Bacteria 67059
74 Ga0163163_10108951 3300014325 Bacteria 2797
75 Ga0157380_10001122 3300014326 Bacteria 17262
76 Ga0157380_10250739 3300014326 Bacteria 1602
77 Ga0182008_10002747 3300014497 Bacteria 10914
78 Ga0182006_1010947 3300015261 Bacteria 4012
79 Ga0182005_1001727 3300015265 Bacteria 8437
80 Ga0183367_1001 3300015688 Bacteria 1225545
81 Ga0163161_10005336 3300017792 Bacteria 8939
82 Ga0163161_10054707 3300017792 Bacteria 2897
83 Ga0207427_100642 3300025231 Bacteria 16938
84 Ga0209233_1000042 3300025261 Bacteria 510519
85 Ga0209565_1000001 3300025263 Bacteria 2950419
86 Ga0209673_1000001 3300025273 Bacteria 3176258
87 Ga0209675_1000001 3300025291 Bacteria 2950293
88 Ga0209564_1000001 3300025295 Bacteria 3176258
89 Ga0209758_1000001 3300025297 Bacteria 1981790
90 Ga0209256_1000006 3300025299 Bacteria 1250310
91 Ga0209257_1016442 3300025304 Bacteria 2993
92 Ga0207713_1001943 3300025735 Bacteria 15628
93 Ga0207680_10034798 3300025903 Bacteria 2885
94 Ga0207680_10128525 3300025903 Bacteria 1667
95 Ga0207647_10088782 3300025904 Bacteria 1846
96 Ga0207645_10109805 3300025907 Bacteria 1785
97 Ga0207695_10000414 3300025913 Bacteria 95039
98 Ga0207695_10000520 3300025913 Bacteria 81547
99 Ga0207695_10098211 3300025913 Bacteria 2928
100 Ga0207671_10061684 3300025914 Bacteria 2782
101 Ga0207657_10030560 3300025919 Bacteria 4888
102 Ga0207681_10000005 3300025923 Bacteria 555724
103 Ga0207681_10000062 3300025923 Bacteria 99856
104 Ga0207681_10014691 3300025923 Bacteria 4874
105 Ga0207650_10000004 3300025925 Bacteria 743372
106 Ga0207650_10034409 3300025925 Bacteria 3674
107 Ga0207650_10065688 3300025925 Bacteria 2719
108 Ga0207644_10000069 3300025931 Bacteria 75201
109 Ga0207644_10001703 3300025931 Bacteria 14193
110 Ga0207690_10149251 3300025932 Bacteria 1732
111 Ga0207706_10075481 3300025933 Bacteria 2964
112 Ga0207691_10018196 3300025940 Bacteria 6656
113 Ga0207691_10311617 3300025940 Bacteria 1350
114 Ga0207711_10000199 3300025941 Bacteria 64399
115 Ga0207711_10001097 3300025941 Bacteria 25808
116 Ga0207667_10000035 3300025949 Bacteria 301056
117 Ga0207667_10025414 3300025949 Bacteria 6481
118 Ga0207712_10071074 3300025961 Bacteria 2502
119 Ga0207712_10100010 3300025961 Bacteria 2154
120 Ga0207668_10000006 3300025972 Bacteria 191468
121 Ga0207668_10007436 3300025972 Bacteria 6513
122 Ga0207658_10000136 3300025986 Bacteria 77275
123 Ga0207658_10000620 3300025986 Bacteria 31373
124 Ga0207658_10002546 3300025986 Bacteria 13253
125 Ga0207658_10005337 3300025986 Bacteria 8836
126 Ga0207703_10018876 3300026035 Bacteria 5387
127 Ga0207641_10000956 3300026088 Bacteria 29693
128 Ga0207641_10012553 3300026088 Bacteria 6944
129 Ga0207641_10013254 3300026088 Bacteria 6760
130 Ga0207676_10000006 3300026095 Bacteria 681936
131 Ga0207674_10086369 3300026116 Bacteria 3132
132 Ga0207674_10146105 3300026116 Bacteria 2323
133 Ga0207675_100000349 3300026118 Bacteria 44097
134 Ga0207675_100085358 3300026118 Bacteria 2963
135 Ga0207683_10144282 3300026121 Bacteria 2146
136 Ga0268266_10000124 3300028379 Bacteria 153051
137 Ga0268265_10000001 3300028380 Bacteria 1230727
138 Ga0268265_10001622 3300028380 Bacteria 18537
139 Ga0268264_10000076 3300028381 Bacteria 255518
140 Ga0268264_10000166 3300028381 Bacteria 146960
141 Ga0265338_10083406 3300028800 Bacteria 2673
142 Ga0307508_10030240 3300031616 Bacteria 4895
143 Ga0265314_10156892 3300031711 Bacteria 1389
144 Ga0307412_10028288 3300031911 Bacteria 3505
145 Ga0436364_1385478 3300037853 Bacteria 81069
146 Ga0436360_0201152 3300039438 Bacteria 3147
147 Ga0439447_003417 3300041407 Bacteria 5645
148 Ga0451793_1510994 3300041452 Bacteria 1781
149 Ga0451800_1680692 3300041459 Bacteria 8075
150 Ga0450903_001735 3300042138 Bacteria 4009
151 Ga0466969_0061461 3300044656 Bacteria 1824
152 Ga0466973_0126580 3300044659 Bacteria 2087
153 Ga0466970_0014411 3300044765 Bacteria 4059
154 Ga0495651_0000666 3300046462 Bacteria 26661
155 Ga0495662_0031799 3300046476 Bacteria 2549
156 Ga0495584_0000318 3300046491 Bacteria 33609
157 Ga0495584_0010461 3300046491 Bacteria 4766
158 Ga0495585_0001782 3300046492 Bacteria 16363
159 Ga0495596_0004812 3300046500 Bacteria 6494
160 Ga0495583_0000121 3300046506 Bacteria 132793
161 Ga0495583_0025440 3300046506 Bacteria 2957
162 Ga0495606_0049633 3300046507 Bacteria 2750
163 Ga0495606_0079352 3300046507 Bacteria 2044
164 Ga0495610_0000699 3300046512 Bacteria 32261
165 Ga0495616_0001670 3300046513 Bacteria 15162
166 Ga0495620_0004118 3300046515 Bacteria 8250
167 Ga0495628_0059877 3300046516 Bacteria 2988
168 Ga0495628_0139136 3300046516 Bacteria 1853
169 Ga0495631_0008933 3300046518 Bacteria 5026
170 Ga0495631_0065050 3300046518 Bacteria 1578
171 Ga0495632_0000001 3300046519 Bacteria 873295
172 Ga0495637_0000065 3300046520 Bacteria 89961
173 Ga0495643_0000006 3300046522 Bacteria 419524
174 Ga0495643_0000093 3300046522 Bacteria 152412
175 Ga0495643_0013550 3300046522 Bacteria 4874
176 Ga0495663_0000001 3300046525 Bacteria 595264
177 Ga0495663_0058986 3300046525 Bacteria 1203
178 Ga0495652_0022093 3300046529 Bacteria 5650
179 Ga0495640_0008687 3300046533 Bacteria 7961
180 Ga0495609_0008238 3300046538 Bacteria 5117
181 Ga0495645_0093745 3300046543 Bacteria 2142
182 Ga0495633_0000053 3300046558 Bacteria 152374
183 Ga0495633_0004208 3300046558 Bacteria 9221
184 Ga0495633_0023935 3300046558 Bacteria 3021
185 Ga0495656_0001165 3300046615 Bacteria 8546
186 Ga0495668_0001956 3300046616 Bacteria 18252
187 Ga0495625_0021243 3300046660 Bacteria 5001
188 Ga0495625_0036697 3300046660 Bacteria 3600
189 Ga0495625_0044416 3300046660 Bacteria 3217
190 Ga0495625_0100954 3300046660 Bacteria 1982
191 Ga0495625_0115031 3300046660 Bacteria 1836
192 Ga0495625_0192978 3300046660 Bacteria 1348
193 Ga0495661_0031912 3300046665 Bacteria 3335
194 Ga0495613_0004722 3300046689 Bacteria 10223
195 Ga0495613_0007842 3300046689 Bacteria 7940
196 Ga0495670_0000102 3300046691 Bacteria 37428
197 Ga0495670_0016109 3300046691 Bacteria 3676
198 Ga0495670_0044677 3300046691 Bacteria 2212
199 Ga0495671_0000008 3300046692 Bacteria 419524
200 Ga0495671_0023444 3300046692 Bacteria 3224
201 Ga0495671_0038594 3300046692 Bacteria 2413
202 Ga0495600_0017570 3300046809 Bacteria 4552
203 Ga0495581_0037909 3300047315 Bacteria 2789
204 Ga0495604_0160765 3300047317 Bacteria 1587
205 Ga0495683_0000041 3300047323 Bacteria 137557
206 Ga0495687_024269 3300047443 Bacteria 2883
207 Ga0495685_002678 3300047447 Bacteria 5613
208 Ga0495681_0002435 3300047470 Bacteria 13285
209 Ga0495686_0008109 3300047472 Bacteria 7767
210 Ga0496101_0010288 3300048904 Bacteria 6177
211 Ga0496106_0034318 3300048909 Bacteria 3789
212 Ga0496109_0017242 3300048912 Bacteria 6328
213 Ga0496110_0180778 3300048913 Bacteria 1915
214 Ga0496115_0091957 3300048918 Bacteria 2480
215 Ga0496117_0035225 3300048920 Bacteria 3759
216 Ga0496117_0070233 3300048920 Bacteria 2354
217 Ga0496118_0009252 3300048921 Bacteria 10000
218 Ga0496118_0015155 3300048921 Bacteria 7157
219 Ga0496118_0017983 3300048921 Bacteria 6404
220 Ga0496118_0062059 3300048921 Bacteria 2762
221 Ga0496119_0002015 3300048922 Bacteria 22992
222 Ga0496119_0014591 3300048922 Bacteria 6129
223 Ga0496120_0000505 3300048923 Bacteria 60875
224 Ga0496120_0002370 3300048923 Bacteria 19236
225 Ga0496121_0000550 3300048924 Bacteria 70775
226 Ga0496121_0011285 3300048924 Bacteria 9951
227 Ga0496121_0112233 3300048924 Bacteria 2077
228 Ga0496121_0126707 3300048924 Bacteria 1918
229 Ga0496122_0001086 3300048925 Bacteria 47240
230 Ga0496122_0004006 3300048925 Bacteria 18770
231 Ga0496122_0076484 3300048925 Bacteria 2355
232 Ga0496123_0000804 3300048926 Bacteria 50773
233 Ga0496123_0021786 3300048926 Bacteria 4967
234 Ga0496123_0109853 3300048926 Bacteria 1579
235 Ga0496124_0000728 3300048927 Bacteria 53915
236 Ga0496124_0025183 3300048927 Bacteria 5393
237 Ga0496125_0009857 3300048928 Bacteria 9719
238 Ga0496125_0222418 3300048928 Bacteria 1215
239 Ga0496126_0013046 3300048929 Bacteria 8479
240 Ga0496126_0015816 3300048929 Bacteria 7578
241 Ga0496126_0040175 3300048929 Bacteria 4338
242 Ga0501043_0003857 3300049579 Bacteria 12322
243 Ga0501043_0018527 3300049579 Bacteria 5462
244 Ga0501046_0155882 3300049580 Bacteria 1720
245 Ga0501047_0000342 3300049581 Bacteria 53140
246 Ga0501047_0001086 3300049581 Bacteria 27130
247 Ga0501048_0279451 3300049582 Bacteria 1187
248 Ga0501035_0180390 3300049822 Bacteria 1819
249 Ga0501044_0127773 3300049823 Bacteria 2538
250 nmdc:mga0k408_37577_c1 3300050493 Bacteria 2780
251 nmdc:mga0k408_66043_c1 3300050493 Bacteria 2107
252 nmdc:mga07m45_5241_c4 3300050496 Bacteria 3481
253 Ga0500643_006629 3300053087 Bacteria 4809
254 Ga0500660_066466 3300053100 Bacteria 1711
255 Ga0500556_0000408 3300053104 Bacteria 31362
256 Ga0500556_0000508 3300053104 Bacteria 26748
257 Ga0500597_001218 3300053120 Bacteria 6331
258 Ga0500607_000395 3300053121 Bacteria 41884
259 Ga0500618_002749 3300053125 Bacteria 6405
260 Ga0500642_0000001 3300053130 Bacteria 1468402
261 Ga0500559_0001954 3300053136 Bacteria 11155
262 Ga0500600_0073854 3300053149 Bacteria 1863
263 Ga0500604_0055589 3300053151 Bacteria 1231
264 Ga0500622_0028367 3300053156 Bacteria 2947
265 Ga0500624_000008 3300053157 Bacteria 181801
266 Ga0500634_0000323 3300053161 Bacteria 15206
267 Ga0500637_0000037 3300053178 Bacteria 47475
268 Ga0500637_0008644 3300053178 Bacteria 5149
269 Ga0500625_026227 3300053729 Bacteria 2760
270 Ga0500645_000428 3300053730 Bacteria 29069
271 Ga0500645_005139 3300053730 Bacteria 4882
272 Ga0500645_007984 3300053730 Bacteria 3647

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0180390 Ga0501035_0180390_684_1730 289
2 3300053149 Ga0500600_0073854 Ga0500600_0073854_870_1808 292
3 3300015688 Ga0183367_1001 Ga0183367_1001640 298
4 3300009093 Ga0105240_10001295 Ga0105240_1000129521 300
5 3300025913 Ga0207695_10000414 Ga0207695_1000041410 300
6 3300042138 Ga0450903_001735 Ga0450903_001735_156_1193 302
7 3300003320 rootH2_10004658 rootH2_1000465835 303
8 3300005577 Ga0068857_100032196 Ga0068857_1000321964 303
9 3300009093 Ga0105240_10000434 Ga0105240_1000043451 303
10 3300010375 Ga0105239_10000354 Ga0105239_1000035451 303
11 3300025913 Ga0207695_10000520 Ga0207695_1000052049 303
12 3300039438 Ga0436360_0201152 Ga0436360_0201152_554_1660 303
13 3300048912 Ga0496109_0017242 Ga0496109_0017242_4502_5581 303
14 3300048922 Ga0496119_0014591 Ga0496119_0014591_3589_4581 303
15 3300048923 Ga0496120_0002370 Ga0496120_0002370_9510_10502 303
16 3300048924 Ga0496121_0126707 Ga0496121_0126707_109_1101 303
17 3300048929 Ga0496126_0015816 Ga0496126_0015816_2854_3846 303
18 3300046476 Ga0495662_0031799 Ga0495662_0031799_1135_2148 305
19 3300046516 Ga0495628_0059877 Ga0495628_0059877_511_1524 305
20 3300046533 Ga0495640_0008687 Ga0495640_0008687_6176_7189 305
21 3300046689 Ga0495613_0007842 Ga0495613_0007842_5288_6301 305
22 3300047317 Ga0495604_0160765 Ga0495604_0160765_545_1558 305
23 3300025914 Ga0207671_10061684 Ga0207671_100616843 306
24 3300025949 Ga0207667_10025414 Ga0207667_100254143 306
25 3300005543 Ga0070672_100290657 Ga0070672_1002906572 307
26 3300014326 Ga0157380_10250739 Ga0157380_102507392 307
27 3300015265 Ga0182005_1001727 Ga0182005_10017273 307
28 3300025940 Ga0207691_10311617 Ga0207691_103116172 307
29 3300046491 Ga0495584_0000318 Ga0495584_0000318_15411_16406 307
30 3300046492 Ga0495585_0001782 Ga0495585_0001782_14332_15327 307
31 3300046500 Ga0495596_0004812 Ga0495596_0004812_2725_3720 307
32 3300046506 Ga0495583_0000121 Ga0495583_0000121_73251_74288 307
33 3300046507 Ga0495606_0049633 Ga0495606_0049633_801_1793 307
34 3300046513 Ga0495616_0001670 Ga0495616_0001670_11089_12084 307
35 3300046518 Ga0495631_0065050 Ga0495631_0065050_545_1537 307
36 3300046525 Ga0495663_0058986 Ga0495663_0058986_135_1127 307
37 3300046538 Ga0495609_0008238 Ga0495609_0008238_2550_3545 307
38 3300046615 Ga0495656_0001165 Ga0495656_0001165_870_1862 307
39 3300046691 Ga0495670_0000102 Ga0495670_0000102_30133_31128 307
40 3300046691 Ga0495670_0044677 Ga0495670_0044677_86_1078 307
41 3300046692 Ga0495671_0023444 Ga0495671_0023444_2101_3093 307
42 3300047323 Ga0495683_0000041 Ga0495683_0000041_74616_75611 307
43 3300048920 Ga0496117_0035225 Ga0496117_0035225_34_1038 307
44 3300048920 Ga0496117_0070233 Ga0496117_0070233_124_1116 307
45 3300048921 Ga0496118_0009252 Ga0496118_0009252_8959_9963 307
46 3300048921 Ga0496118_0015155 Ga0496118_0015155_6088_7080 307
47 3300048922 Ga0496119_0002015 Ga0496119_0002015_21955_22959 307
48 3300048923 Ga0496120_0000505 Ga0496120_0000505_21955_22959 307
49 3300048929 Ga0496126_0013046 Ga0496126_0013046_48_1040 307
50 3300003771 Ga0055526_1001417 Ga0055526_100141713 308
51 3300003773 Ga0055537_1000723 Ga0055537_10007235 308
52 3300003775 Ga0055524_1000393 Ga0055524_10003935 308
53 3300003784 Ga0055534_1000673 Ga0055534_100067313 308
54 3300003790 Ga0055528_1001159 Ga0055528_10011595 308
55 3300025263 Ga0209565_1000001 Ga0209565_100000133 308
56 3300025273 Ga0209673_1000001 Ga0209673_100000133 308
57 3300025291 Ga0209675_1000001 Ga0209675_10000012499 308
58 3300025295 Ga0209564_1000001 Ga0209564_10000012661 308
59 3300025299 Ga0209256_1000006 Ga0209256_10000061097 308
60 3300041459 Ga0451800_1680692 Ga0451800_1680692_4986_6089 308
61 3300046507 Ga0495606_0079352 Ga0495606_0079352_916_1911 308
62 3300046518 Ga0495631_0008933 Ga0495631_0008933_1389_2384 308
63 3300046660 Ga0495625_0021243 Ga0495625_0021243_2734_3729 308
64 3300046665 Ga0495661_0031912 Ga0495661_0031912_2103_3098 308
65 3300046691 Ga0495670_0016109 Ga0495670_0016109_475_1470 308
66 3300046692 Ga0495671_0038594 Ga0495671_0038594_29_1024 308
67 3300048918 Ga0496115_0091957 Ga0496115_0091957_670_1632 308
68 3300048921 Ga0496118_0017983 Ga0496118_0017983_3156_4175 308
69 iso_pu_bacteria 2896184354 2896187387 308
70 iso_pu_bacteria 8021622325 8021625892 308
71 iso_pu_bacteria 8021626552 8021628040 308
72 iso_pu_bacteria 8021648035 8021648951 308
73 3300037853 Ga0436364_1385478 Ga0436364_1385478_4603_5655 309
74 3300046506 Ga0495583_0025440 Ga0495583_0025440_1140_2153 309
75 3300046515 Ga0495620_0004118 Ga0495620_0004118_6691_7704 309
76 3300046522 Ga0495643_0013550 Ga0495643_0013550_2491_3504 309
77 3300046660 Ga0495625_0192978 Ga0495625_0192978_146_1159 309
78 3300046689 Ga0495613_0004722 Ga0495613_0004722_4825_5838 309
79 3300047443 Ga0495687_024269 Ga0495687_024269_569_1582 309
80 3300028800 Ga0265338_10083406 Ga0265338_100834062 310
81 iso_pu_bacteria 2848297114 2848297845 310
82 3300003323 rootH1_10080270 rootH1_100802705 311
83 3300048909 Ga0496106_0034318 Ga0496106_0034318_330_1334 311
84 3300048924 Ga0496121_0000550 Ga0496121_0000550_58943_59947 311
85 3300006195 Ga0075366_10016458 Ga0075366_100164581 312
86 3300009177 Ga0105248_10008755 Ga0105248_100087554 312
87 3300046616 Ga0495668_0001956 Ga0495668_0001956_3454_4476 312
88 3300050493 nmdc:mga0k408_37577_c1 nmdc:mga0k408_37577_c1_146_1132 312
89 iso_pu_bacteria 8011350971 8011354129 312
90 3300006353 Ga0075370_10017118 Ga0075370_100171182 313
91 3300048925 Ga0496122_0001086 Ga0496122_0001086_35011_36003 313
92 3300048926 Ga0496123_0000804 Ga0496123_0000804_14779_15771 313
93 3300050496 nmdc:mga07m45_5241_c4 nmdc:mga07m45_5241_c4_408_1409 313
94 3300053121 Ga0500607_000395 Ga0500607_000395_21746_22747 313
95 3300053136 Ga0500559_0001954 Ga0500559_0001954_5718_6719 313
96 3300053151 Ga0500604_0055589 Ga0500604_0055589_72_1073 313
97 3300053178 Ga0500637_0008644 Ga0500637_0008644_2826_3827 313
98 3300053730 Ga0500645_007984 Ga0500645_007984_1965_2960 313
99 3300005436 Ga0070713_100054291 Ga0070713_1000542914 314
100 3300006195 Ga0075366_10006177 Ga0075366_100061777 314
101 3300009545 Ga0105237_10068900 Ga0105237_100689003 314
102 3300009551 Ga0105238_10060863 Ga0105238_100608633 314
103 3300046512 Ga0495610_0000699 Ga0495610_0000699_14998_16023 314
104 3300046522 Ga0495643_0000093 Ga0495643_0000093_138987_140012 314
105 3300046558 Ga0495633_0023935 Ga0495633_0023935_2018_3010 314
106 3300050493 nmdc:mga0k408_66043_c1 nmdc:mga0k408_66043_c1_511_1503 314
107 3300053161 Ga0500634_0000323 Ga0500634_0000323_14121_15113 314
108 iso_pu_bacteria 2511231221 2512035918 314
109 iso_pu_bacteria 2897803580 2897807185 314
110 iso_pu_bacteria 8054002106 8054002624 314
111 3300046462 Ga0495651_0000666 Ga0495651_0000666_4630_5691 315
112 3300046516 Ga0495628_0139136 Ga0495628_0139136_600_1661 315
113 3300046529 Ga0495652_0022093 Ga0495652_0022093_1142_2203 315
114 3300046543 Ga0495645_0093745 Ga0495645_0093745_1066_2127 315
115 3300046809 Ga0495600_0017570 Ga0495600_0017570_1748_2809 315
116 3300053730 Ga0500645_005139 Ga0500645_005139_3591_4589 315
117 iso_pu_bacteria 2643221658 2644324404 315
118 iso_pu_bacteria 2643221672 2644396252 315
119 3300002772 JGI25164J39214_1003927 JGI25164J39214_10039272 316
120 3300005340 Ga0070689_100058363 Ga0070689_1000583631 316
121 3300005577 Ga0068857_100086378 Ga0068857_1000863782 316
122 3300009093 Ga0105240_10103477 Ga0105240_101034774 316
123 3300025231 Ga0207427_100642 Ga0207427_1006429 316
124 3300025913 Ga0207695_10098211 Ga0207695_100982114 316
125 3300026116 Ga0207674_10146105 Ga0207674_101461053 316
126 3300031911 Ga0307412_10028288 Ga0307412_100282882 316
127 3300048904 Ga0496101_0010288 Ga0496101_0010288_1469_2461 316
128 iso_pu_bacteria 2945984333 2945990760 316
129 3300009545 Ga0105237_10140303 Ga0105237_101403032 317
130 3300014497 Ga0182008_10002747 Ga0182008_100027477 317
131 3300015261 Ga0182006_1010947 Ga0182006_10109472 317
132 3300026121 Ga0207683_10144282 Ga0207683_101442822 317
133 3300041407 Ga0439447_003417 Ga0439447_003417_1793_2872 317
134 3300047315 Ga0495581_0037909 Ga0495581_0037909_524_1534 317
135 3300005335 Ga0070666_10008732 Ga0070666_100087322 318
136 3300005347 Ga0070668_100000003 Ga0070668_10000000342 318
137 3300005355 Ga0070671_100000061 Ga0070671_10000006172 318
138 3300005367 Ga0070667_100000035 Ga0070667_10000003560 318
139 3300005719 Ga0068861_100032263 Ga0068861_1000322633 318
140 3300005842 Ga0068858_100001677 Ga0068858_10000167718 318
141 3300005843 Ga0068860_100000106 Ga0068860_10000010677 318
142 3300005844 Ga0068862_100002586 Ga0068862_1000025863 318
143 3300009553 Ga0105249_10119471 Ga0105249_101194712 318
144 3300025923 Ga0207681_10014691 Ga0207681_100146912 318
145 3300025925 Ga0207650_10034409 Ga0207650_100344095 318
146 3300025931 Ga0207644_10000069 Ga0207644_100000696 318
147 3300025961 Ga0207712_10100010 Ga0207712_101000102 318
148 3300025972 Ga0207668_10000006 Ga0207668_1000000637 318
149 3300025986 Ga0207658_10000136 Ga0207658_1000013663 318
150 3300026035 Ga0207703_10018876 Ga0207703_100188762 318
151 3300026088 Ga0207641_10012553 Ga0207641_100125536 318
152 3300026118 Ga0207675_100085358 Ga0207675_1000853583 318
153 3300028380 Ga0268265_10001622 Ga0268265_1000162218 318
154 3300028381 Ga0268264_10000076 Ga0268264_10000076203 318
155 3300031616 Ga0307508_10030240 Ga0307508_100302402 318
156 3300044659 Ga0466973_0126580 Ga0466973_0126580_901_1893 318
157 3300003320 rootH2_10021803 rootH2_100218034 319
158 3300031711 Ga0265314_10156892 Ga0265314_101568922 319
159 3300044656 Ga0466969_0061461 Ga0466969_0061461_325_1395 319
160 3300044765 Ga0466970_0014411 Ga0466970_0014411_2624_3694 319
161 3300049579 Ga0501043_0018527 Ga0501043_0018527_2924_3919 319
162 3300049580 Ga0501046_0155882 Ga0501046_0155882_143_1138 319
163 3300049581 Ga0501047_0000342 Ga0501047_0000342_37309_38304 319
164 3300049582 Ga0501048_0279451 Ga0501048_0279451_42_1037 319
165 iso_pu_bacteria 2894023352 2894024175 319
166 3300049579 Ga0501043_0003857 Ga0501043_0003857_304_1308 320
167 3300049581 Ga0501047_0001086 Ga0501047_0001086_23005_24009 320
168 3300049823 Ga0501044_0127773 Ga0501044_0127773_372_1376 320
169 3300053156 Ga0500622_0028367 Ga0500622_0028367_1075_2088 320
170 3300005616 Ga0068852_100136330 Ga0068852_1001363301 321
171 3300026116 Ga0207674_10086369 Ga0207674_100863693 321
172 3300048928 Ga0496125_0222418 Ga0496125_0222418_181_1188 321
173 iso_pu_bacteria 2582581305 2585261265 321
174 3300017792 Ga0163161_10005336 Ga0163161_100053364 322
175 3300025903 Ga0207680_10034798 Ga0207680_100347981 322
176 3300053100 Ga0500660_066466 Ga0500660_066466_484_1491 322
177 3300053729 Ga0500625_026227 Ga0500625_026227_118_1137 322
178 iso_pu_bacteria 2738541307 2738880260 322
179 3300003214 JGI25165J46597_1000038 JGI25165J46597_1000038180 323
180 3300006353 Ga0075370_10043603 Ga0075370_100436032 323
181 3300006353 Ga0075370_10047506 Ga0075370_100475062 323
182 3300025261 Ga0209233_1000042 Ga0209233_1000042300 323
183 3300025304 Ga0209257_1016442 Ga0209257_10164425 323
184 3300046660 Ga0495625_0100954 Ga0495625_0100954_140_1156 323
185 3300053087 Ga0500643_006629 Ga0500643_006629_2256_3272 323
186 3300053104 Ga0500556_0000508 Ga0500556_0000508_261_1277 323
187 3300053730 Ga0500645_000428 Ga0500645_000428_16361_17377 323
188 3300048925 Ga0496122_0076484 Ga0496122_0076484_1237_2253 324
189 iso_pu_bacteria 2643221647 2644261870 324
190 iso_pu_bacteria 2738541277 2738720321 324
191 iso_pu_bacteria 2738543019 2739279520 324
192 3300053125 Ga0500618_002749 Ga0500618_002749_1487_2503 325
193 3300041452 Ga0451793_1510994 Ga0451793_1510994_138_1169 327
194 3300046660 Ga0495625_0115031 Ga0495625_0115031_62_1111 328
195 3300047447 Ga0495685_002678 Ga0495685_002678_305_1354 328
196 3300003215 JGI25153J46596_10000005 JGI25153J46596_10000005400 333
197 3300025297 Ga0209758_1000001 Ga0209758_1000001400 333
198 3300025919 Ga0207657_10030560 Ga0207657_100305603 335
199 3300048913 Ga0496110_0180778 Ga0496110_0180778_731_1834 346
200 3300025932 Ga0207690_10149251 Ga0207690_101492512 349
201 3300005457 Ga0070662_100020516 Ga0070662_1000205164 350
202 3300025904 Ga0207647_10088782 Ga0207647_100887822 350
203 3300025933 Ga0207706_10075481 Ga0207706_100754812 350
204 3300009553 Ga0105249_10117042 Ga0105249_101170422 356
205 3300025961 Ga0207712_10071074 Ga0207712_100710742 356
206 3300048924 Ga0496121_0112233 Ga0496121_0112233_413_1546 356
207 3300048925 Ga0496122_0004006 Ga0496122_0004006_13925_15058 356
208 3300048926 Ga0496123_0021786 Ga0496123_0021786_921_2054 356
209 3300048927 Ga0496124_0025183 Ga0496124_0025183_2894_4027 356
210 3300048928 Ga0496125_0009857 Ga0496125_0009857_6113_7246 356
211 3300048929 Ga0496126_0040175 Ga0496126_0040175_2469_3602 356
212 iso_pu_bacteria 2808606401 2809063894 360
213 iso_pu_bacteria 2808606404 2809079862 360
214 iso_pu_bacteria 2808606405 2809084227 360
215 iso_pu_bacteria 2880518877 2880523419 360
216 3300046660 Ga0495625_0036697 Ga0495625_0036697_1250_2452 362
217 3300053104 Ga0500556_0000408 Ga0500556_0000408_8486_9688 362
218 3300053130 Ga0500642_0000001 Ga0500642_0000001_472810_474012 362
219 3300005289 Ga0065704_10081887 Ga0065704_100818874 363
220 3300005331 Ga0070670_100107166 Ga0070670_1001071662 363
221 3300005347 Ga0070668_100008702 Ga0070668_1000087024 363
222 3300005353 Ga0070669_100000393 Ga0070669_10000039333 363
223 3300005548 Ga0070665_100000150 Ga0070665_10000015097 363
224 3300005841 Ga0068863_100008711 Ga0068863_1000087114 363
225 3300009011 Ga0105251_10000694 Ga0105251_1000069418 363
226 3300009101 Ga0105247_10029903 Ga0105247_100299032 363
227 3300009177 Ga0105248_10016340 Ga0105248_100163402 363
228 3300009553 Ga0105249_10219298 Ga0105249_102192981 363
229 3300025735 Ga0207713_1001943 Ga0207713_10019433 363
230 3300025923 Ga0207681_10000062 Ga0207681_1000006259 363
231 3300025925 Ga0207650_10065688 Ga0207650_100656882 363
232 3300025931 Ga0207644_10001703 Ga0207644_100017033 363
233 3300025941 Ga0207711_10001097 Ga0207711_100010972 363
234 3300025986 Ga0207658_10002546 Ga0207658_1000254618 363
235 3300026088 Ga0207641_10013254 Ga0207641_100132543 363
236 3300028379 Ga0268266_10000124 Ga0268266_1000012415 363
237 3300048921 Ga0496118_0062059 Ga0496118_0062059_1071_2201 363
238 3300048924 Ga0496121_0011285 Ga0496121_0011285_4320_5450 363
239 3300048926 Ga0496123_0109853 Ga0496123_0109853_211_1341 363
240 3300053120 Ga0500597_001218 Ga0500597_001218_2277_3428 363
241 3300053157 Ga0500624_000008 Ga0500624_000008_103695_104846 363
242 3300053178 Ga0500637_0000037 Ga0500637_0000037_26858_28009 363
243 3300048927 Ga0496124_0000728 Ga0496124_0000728_16757_17893 364
244 3300005335 Ga0070666_10096862 Ga0070666_100968622 366
245 3300005367 Ga0070667_100000174 Ga0070667_10000017434 366
246 3300005617 Ga0068859_100251682 Ga0068859_1002516822 366
247 3300005841 Ga0068863_100001506 Ga0068863_10000150619 366
248 3300005843 Ga0068860_100000125 Ga0068860_10000012546 366
249 3300006931 Ga0097620_100251672 Ga0097620_1002516722 366
250 3300025903 Ga0207680_10128525 Ga0207680_101285252 366
251 3300025986 Ga0207658_10005337 Ga0207658_100053377 366
252 3300026088 Ga0207641_10000956 Ga0207641_1000095616 366
253 3300028381 Ga0268264_10000166 Ga0268264_1000016667 366
254 3300046491 Ga0495584_0010461 Ga0495584_0010461_2268_3416 367
255 3300046519 Ga0495632_0000001 Ga0495632_0000001_571137_572285 367
256 3300046520 Ga0495637_0000065 Ga0495637_0000065_18186_19334 367
257 3300046522 Ga0495643_0000006 Ga0495643_0000006_262299_263447 367
258 3300046525 Ga0495663_0000001 Ga0495663_0000001_301011_302159 367
259 3300046558 Ga0495633_0000053 Ga0495633_0000053_122786_123934 367
260 3300046558 Ga0495633_0004208 Ga0495633_0004208_5544_6692 367
261 3300046660 Ga0495625_0044416 Ga0495625_0044416_469_1617 367
262 3300046692 Ga0495671_0000008 Ga0495671_0000008_262299_263447 367
263 3300047470 Ga0495681_0002435 Ga0495681_0002435_7698_8846 367
264 3300047472 Ga0495686_0008109 Ga0495686_0008109_1517_2665 367
265 3300005563 Ga0068855_100000029 Ga0068855_10000002963 369
266 3300025949 Ga0207667_10000035 Ga0207667_10000035160 369
267 3300005366 Ga0070659_100025615 Ga0070659_1000256153 374
268 3300005543 Ga0070672_100012860 Ga0070672_1000128602 374
269 3300025907 Ga0207645_10109805 Ga0207645_101098051 374
270 3300025940 Ga0207691_10018196 Ga0207691_100181965 374
271 3300002076 JGI24749J21850_1000001 JGI24749J21850_100000139 375
272 3300002459 JGI24751J29686_10000086 JGI24751J29686_1000008611 375
273 3300005295 Ga0065707_10084403 Ga0065707_100844032 375
274 3300005331 Ga0070670_100000003 Ga0070670_100000003183 375
275 3300005347 Ga0070668_100049710 Ga0070668_1000497103 375
276 3300005353 Ga0070669_100000084 Ga0070669_10000008477 375
277 3300005367 Ga0070667_100000453 Ga0070667_10000045321 375
278 3300005617 Ga0068859_100002830 Ga0068859_10000283013 375
279 3300005618 Ga0068864_100000005 Ga0068864_10000000547 375
280 3300005719 Ga0068861_100031699 Ga0068861_1000316992 375
281 3300005844 Ga0068862_100000001 Ga0068862_100000001406 375
282 3300006931 Ga0097620_100002830 Ga0097620_10000283013 375
283 3300009177 Ga0105248_10000222 Ga0105248_1000022243 375
284 3300014325 Ga0163163_10108951 Ga0163163_101089512 375
285 3300014326 Ga0157380_10001122 Ga0157380_1000112213 375
286 3300017792 Ga0163161_10054707 Ga0163161_100547071 375
287 3300025923 Ga0207681_10000005 Ga0207681_10000005549 375
288 3300025925 Ga0207650_10000004 Ga0207650_10000004180 375
289 3300025941 Ga0207711_10000199 Ga0207711_1000019914 375
290 3300025972 Ga0207668_10007436 Ga0207668_100074364 375
291 3300025986 Ga0207658_10000620 Ga0207658_1000062023 375
292 3300026095 Ga0207676_10000006 Ga0207676_10000006530 375
293 3300026118 Ga0207675_100000349 Ga0207675_1000003498 375
294 3300028380 Ga0268265_10000001 Ga0268265_10000001630 375

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13593

SBF_like

SBF-like CPA transporter family (DUF4137)

16

326

0.98

PF01758

SBF

Sodium Bile acid symporter family

47

261

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cyg-assembly2.cif.gz_B crystal structure of a cysteine-pair mutant (y113c-p190c) of a bacterial bile acid transporter before disulfide bond formation 0.8625 14 309
4n7w-assembly1.cif.gz_A crystal structure of the sodium bile acid symporter from yersinia frederiksenii 0.8596 14 309
7cyk-assembly2.cif.gz_B crystal structure of a second cysteine-pair mutant (v110c-i197c) of a bacterial bile acid transporter before disulfide bond formation 0.8458 12 306
7cyg-assembly2.cif.gz_B crystal structure of a cysteine-pair mutant (y113c-p190c) of a bacterial bile acid transporter before disulfide bond formation 0.8358 14 309
3zuy-assembly1.cif.gz_A crystal structure of a bacterial homologue of the bile acid sodium symporter asbt. 0.8328 14 311
ID Description Score Start End Superfamily
af_Q05131_20_384_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8733 14 308 1.20.1530.20
af_P39836_5_322_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8607 12 314 1.20.1530.20
4n7wA00 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8596 14 309 1.20.1530.20
af_Q5PT50_1_323_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8453 1 308 1.20.1530.20
af_Q1EBV7_88_396_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.835 14 309 1.20.1530.20
ID Description Score Start End GO Terms
AF-A0A1Y3C706-F1-model_v4 Bile acid:sodium symporter 0.9596 12 310 GO:0005886
AF-N9JMN3-F1-model_v4 Bile acid:sodium symporter 0.958 12 312 GO:0005886
AF-A0A1L6KLJ1-F1-model_v4 deleted 0.9545 9 313
AF-C0VGB1-F1-model_v4 Bile acid:sodium symporter 0.9531 64 313 GO:0005886
AF-A0A1B8QHH1-F1-model_v4 Bile acid:sodium symporter 0.9517 11 311 GO:0005886

Feature Viewer

pLDDT pTM Quality
70.92 0.63 Medium
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Predicted Structure (AlphaFold2)

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