F391830

General Info

Members Datasets Scaffolds Average Seq Length
293 223 586 443

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006425503|3006426742
Length 502
Sequence PSSTSPIPPVPPVPPASAVPPAPHTAAPGAATSGTATSGTAAPGAPGPRGPGDPAAPPPPPRAFDPGAEAARATAAILHDTLHGPHRGVVVDSPPGAGKSTLVVRAARELAAAGHRLMVVAQTNAQVDDLVDRLATADPELPVGRLHSSDPSPYDPVLDGHPSVRKSAKIAELAESAVVLSTAAKWAHVRNTEPWPHAIVDEAYQMRSDALLAVAGLFERALFVGDPGQLDPFAVVGAEQWAGLSYDPSASAVSTLLAHHPDLPQHRLPVSWRLPASAAPLVSEAFYPYTPFRSGTGPGDRRLSFTAPADGSPVDRVLDEAAAAGWGLLELPARHTPRTDPEAVAALALVVRRLLDRGGVTADERQEGAPLTARRIAVGTAHRDQAAAVREALAALGVEGVAVDTANRLQGREFDVTVVLHPLSGRPDATAFHLETGRLCVLASRHRHACVVVCRAGVTELLDGHPSTEPVQLGVTVKFPDGWEANHAVLTHLGRHRVTWEV

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
5 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
6 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
7 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
8 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
9 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
10 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
11 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
12 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
13 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
14 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
15 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
16 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
17 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
18 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
19 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
20 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
28 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
29 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
30 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
31 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
32 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
33 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
34 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
35 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
36 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
37 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
38 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
39 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
40 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
41 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
42 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
43 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
44 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
45 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
46 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
47 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
48 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
53 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
54 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
55 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
58 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
59 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
60 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
61 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
62 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
63 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
64 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
65 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
66 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
67 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
68 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
69 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
70 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
71 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
72 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
73 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
74 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
75 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
76 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
79 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
82 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
83 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
84 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
85 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
86 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
87 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
88 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
89 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
90 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
91 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
92 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
93 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
94 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
95 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
96 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
97 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
98 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
99 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
100 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
101 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
102 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
103 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
104 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
105 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
106 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
113 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
127 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
137 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
141 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
142 2508501039 Frankia saprophytica CN3 Isolate Nodule
143 2517572101 Frankia sp. DC12 Isolate Nodule
144 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
145 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
146 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
147 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
148 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
149 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
150 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
151 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
152 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
153 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
154 2643221647 Streptomyces sp. Root369 Isolate Unclassified
155 2643221670 Streptomyces sp. Root431 Isolate Unclassified
156 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
157 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
158 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
159 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
160 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
161 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
162 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
163 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
164 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
165 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
166 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
167 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
168 2808606448 Streptomyces sp. 193411 Isolate Unclassified
169 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
170 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
171 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
172 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
173 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
174 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
175 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
176 2862574272 Streptomyces sp. AcE210 Isolate Nodule
177 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
178 2867369537 Streptomyces sp. Z26 Isolate Unclassified
179 2867475112 Streptomyces sp. TM32 Isolate Unclassified
180 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
181 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
182 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
183 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
184 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
185 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
186 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
187 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
188 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
189 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
190 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
191 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
192 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
193 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
194 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
195 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
196 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
197 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
198 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
199 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
200 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
201 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
202 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
203 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
204 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
205 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
206 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
207 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
208 8002775197 Frankia nepalensis CN7 Isolate Nodule
209 8002784119 Frankia sp. AgB1.9 Isolate Nodule
210 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
211 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
212 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
213 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
214 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
215 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
216 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
217 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
218 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
219 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
220 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
221 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
222 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
223 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.99
Metatranscriptomes 0.68
Isolates 28.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.39
Nodule 2.05
Rhizoplane 0.68
Rhizosphere 74.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10038729 3300003322 Bacteria 3208
2 JGI25160J50197_1020641 3300003354 Bacteria 1981
3 JGI25160J50197_1022730 3300003354 Bacteria 1830
4 Ga0006562J51391_1053633 3300003578 Bacteria 5840
5 Ga0006562J51391_1053634 3300003578 Bacteria 4920
6 Ga0070711_100086869 3300005439 Bacteria 2244
7 Ga0068853_100017921 3300005539 Bacteria 5852
8 Ga0068856_100048775 3300005614 Bacteria 4174
9 Ga0068859_100037826 3300005617 Bacteria 4843
10 Ga0068863_100000648 3300005841 Bacteria 35309
11 Ga0068858_100009162 3300005842 Bacteria 9462
12 Ga0097620_100037827 3300006931 Bacteria 4843
13 Ga0105251_10010199 3300009011 Bacteria 5471
14 Ga0105245_10168935 3300009098 Bacteria 2081
15 Ga0105248_10000039 3300009177 Bacteria 179700
16 Ga0157372_10243700 3300013307 Bacteria 2086
17 Ga0182008_10002988 3300014497 Bacteria 10409
18 Ga0182007_10003775 3300015262 Bacteria 7055
19 Ga0182005_1009270 3300015265 Bacteria 2868
20 Ga0183367_1006 3300015688 Bacteria 648044
21 Ga0207426_1002143 3300025302 Bacteria 13468
22 Ga0207426_1003031 3300025302 Bacteria 9718
23 Ga0207426_1012179 3300025302 Bacteria 3242
24 Ga0207699_10031615 3300025906 Bacteria 2974
25 Ga0207650_10246366 3300025925 Bacteria 1445
26 Ga0207711_10000151 3300025941 Bacteria 74004
27 Ga0207667_10272933 3300025949 Bacteria 1729
28 Ga0207703_10171932 3300026035 Bacteria 1906
29 Ga0207639_10014960 3300026041 Bacteria 5467
30 Ga0207641_10017942 3300026088 Bacteria 5797
31 Ga0307517_10007767 3300028786 Bacteria 15553
32 Ga0307517_10081535 3300028786 Bacteria 2756
33 Ga0307515_10002392 3300028794 Bacteria 40929
34 Ga0268256_1006529 3300030500 Bacteria 4318
35 Ga0307511_10003393 3300030521 Bacteria 16373
36 Ga0307512_10002125 3300030522 Bacteria 26015
37 Ga0307512_10094598 3300030522 Bacteria 2061
38 Ga0307509_10019616 3300031507 Bacteria 7702
39 Ga0307509_10037317 3300031507 Bacteria 5313
40 Ga0307508_10003430 3300031616 Bacteria 16033
41 Ga0307508_10006789 3300031616 Bacteria 10713
42 Ga0307508_10048902 3300031616 Bacteria 3766
43 Ga0307514_10061092 3300031649 Bacteria 2871
44 Ga0307516_10025259 3300031730 Bacteria 6050
45 Ga0307516_10085245 3300031730 Bacteria 2997
46 Ga0307516_10174917 3300031730 Bacteria 1884
47 Ga0307518_10052985 3300031838 Bacteria 2948
48 Ga0307507_10022888 3300033179 Bacteria 6882
49 Ga0307507_10093851 3300033179 Bacteria 2554
50 Ga0307510_10029313 3300033180 Bacteria 6266
51 Ga0307510_10047456 3300033180 Bacteria 4600
52 Ga0395898_0231520 3300037466 Bacteria 1762
53 Ga0439436_0000659 3300041404 Bacteria 9206
54 Ga0439439_0006878 3300041406 Bacteria 2640
55 Ga0439433_0004550 3300041999 Bacteria 2987
56 Ga0439433_0008007 3300041999 Bacteria 2287
57 Ga0439449_0000445 3300042007 Bacteria 15371
58 Ga0439457_001579 3300042014 Bacteria 6812
59 Ga0439462_0000543 3300042015 Bacteria 7466
60 Ga0439462_0014690 3300042015 Bacteria 2014
61 Ga0466969_0009663 3300044656 Bacteria 5114
62 Ga0466969_0011501 3300044656 Bacteria 4685
63 Ga0466972_0003873 3300044658 Bacteria 7449
64 Ga0466965_0015983 3300044683 Bacteria 3566
65 Ga0466965_0025769 3300044683 Bacteria 2848
66 Ga0466965_0036012 3300044683 Bacteria 2427
67 Ga0466966_0006246 3300044684 Bacteria 7881
68 Ga0466966_0007580 3300044684 Bacteria 7191
69 Ga0466961_0001498 3300044693 Bacteria 14489
70 Ga0466961_0039591 3300044693 Bacteria 3022
71 Ga0466963_0000522 3300044694 Bacteria 17993
72 Ga0466963_0001178 3300044694 Bacteria 13732
73 Ga0466971_0001322 3300044719 Bacteria 10363
74 Ga0466971_0030100 3300044719 Bacteria 2429
75 Ga0466971_0039482 3300044719 Bacteria 2118
76 Ga0466970_0003479 3300044765 Bacteria 7675
77 Ga0466957_0008360 3300044842 Bacteria 5885
78 Ga0466960_0018337 3300044901 Bacteria 3065
79 Ga0466959_0013795 3300045049 Bacteria 5867
80 Ga0466959_0026660 3300045049 Bacteria 4283
81 Ga0466958_0020778 3300045836 Bacteria 3831
82 Ga0495592_0003075 3300046454 Bacteria 11902
83 Ga0495603_0009524 3300046455 Bacteria 5868
84 Ga0495629_0003311 3300046459 Bacteria 12172
85 Ga0495629_0010777 3300046459 Bacteria 6649
86 Ga0495629_0023883 3300046459 Bacteria 4354
87 Ga0495629_0036919 3300046459 Bacteria 3446
88 Ga0495629_0068410 3300046459 Bacteria 2478
89 Ga0495629_0153120 3300046459 Bacteria 1602
90 Ga0495638_0018328 3300046460 Bacteria 4651
91 Ga0495651_0001366 3300046462 Bacteria 18879
92 Ga0495651_0093836 3300046462 Bacteria 2246
93 Ga0495662_0012565 3300046476 Bacteria 4130
94 Ga0495662_0052089 3300046476 Bacteria 1976
95 Ga0495664_0039626 3300046477 Bacteria 2784
96 Ga0495594_0000495 3300046499 Bacteria 20094
97 Ga0495594_0025963 3300046499 Bacteria 3150
98 Ga0495594_0059912 3300046499 Bacteria 2106
99 Ga0495583_0013922 3300046506 Bacteria 4458
100 Ga0495606_0030421 3300046507 Bacteria 3772
101 Ga0495610_0017093 3300046512 Bacteria 4147
102 Ga0495618_0003994 3300046514 Bacteria 9096
103 Ga0495620_0007567 3300046515 Bacteria 5890
104 Ga0495628_0017735 3300046516 Bacteria 5913
105 Ga0495630_0085102 3300046517 Bacteria 2387
106 Ga0495631_0006654 3300046518 Bacteria 5942
107 Ga0495632_0022272 3300046519 Bacteria 3398
108 Ga0495648_0046216 3300046524 Bacteria 2700
109 Ga0495652_0036256 3300046529 Bacteria 4290
110 Ga0495640_0023485 3300046533 Bacteria 4491
111 Ga0495640_0043482 3300046533 Bacteria 3128
112 Ga0495640_0083791 3300046533 Bacteria 2115
113 Ga0495587_0009885 3300046536 Bacteria 6090
114 Ga0495609_0047067 3300046538 Bacteria 1930
115 Ga0495645_0011020 3300046543 Bacteria 6353
116 Ga0495622_0012909 3300046557 Bacteria 3874
117 Ga0495622_0032860 3300046557 Bacteria 2422
118 Ga0495633_0007062 3300046558 Bacteria 6536
119 Ga0495667_0100435 3300046559 Bacteria 1872
120 Ga0495634_0001721 3300046642 Bacteria 18959
121 Ga0495625_0165913 3300046660 Bacteria 1476
122 Ga0495635_0004309 3300046663 Bacteria 9854
123 Ga0495635_0149881 3300046663 Bacteria 1587
124 Ga0495588_0002745 3300046674 Bacteria 7552
125 Ga0495588_0019929 3300046674 Bacteria 3291
126 Ga0495657_0001931 3300046675 Bacteria 17665
127 Ga0495657_0008183 3300046675 Bacteria 8013
128 Ga0495646_0001686 3300046680 Bacteria 13221
129 Ga0495658_0060511 3300046683 Bacteria 2172
130 Ga0495613_0006490 3300046689 Bacteria 8738
131 Ga0495613_0011832 3300046689 Bacteria 6483
132 Ga0495649_0011137 3300046694 Bacteria 5291
133 Ga0495589_0008055 3300046794 Bacteria 5511
134 Ga0495581_0018038 3300047315 Bacteria 4099
135 Ga0495581_0034379 3300047315 Bacteria 2933
136 Ga0495604_0004186 3300047317 Bacteria 11438
137 Ga0495604_0038885 3300047317 Bacteria 3742
138 Ga0495636_0011222 3300047318 Bacteria 3545
139 Ga0495674_0068524 3300047319 Bacteria 3071
140 Ga0495674_0090453 3300047319 Bacteria 2615
141 Ga0495676_0021624 3300047321 Bacteria 5612
142 Ga0495676_0023827 3300047321 Bacteria 5304
143 Ga0495683_0019999 3300047323 Bacteria 3455
144 Ga0495687_019461 3300047443 Bacteria 3331
145 Ga0495675_0007856 3300047444 Bacteria 6590
146 Ga0495675_0018228 3300047444 Bacteria 4455
147 Ga0495675_0034251 3300047444 Bacteria 3242
148 Ga0495685_006061 3300047447 Bacteria 3953
149 Ga0495685_011501 3300047447 Bacteria 2987
150 Ga0495681_0000354 3300047470 Bacteria 35817
151 Ga0495593_0003781 3300047673 Bacteria 9039
152 Ga0495614_0010218 3300048089 Bacteria 4140
153 Ga0495614_0024367 3300048089 Bacteria 2612
154 Ga0495626_0008906 3300048091 Bacteria 5450
155 Ga0496109_0100741 3300048912 Bacteria 2680
156 Ga0496116_0000174 3300048919 Bacteria 129255
157 Ga0496117_0020393 3300048920 Bacteria 5404
158 Ga0496118_0003646 3300048921 Bacteria 19128
159 Ga0496118_0032104 3300048921 Bacteria 4336
160 Ga0496119_0006195 3300048922 Bacteria 11186
161 Ga0496121_0014016 3300048924 Bacteria 8558
162 Ga0495678_015347 3300049459 Bacteria 3528
163 Ga0501031_0009073 3300049568 Bacteria 6466
164 Ga0501033_0001126 3300049570 Bacteria 24221
165 Ga0501033_0002148 3300049570 Bacteria 17061
166 Ga0501033_0025198 3300049570 Bacteria 4481
167 Ga0501033_0041518 3300049570 Bacteria 3432
168 Ga0501033_0123609 3300049570 Bacteria 1876
169 Ga0501034_0001336 3300049571 Bacteria 33314
170 Ga0501034_0099764 3300049571 Bacteria 2898
171 Ga0501036_0000215 3300049572 Bacteria 38553
172 Ga0501036_0022181 3300049572 Bacteria 5341
173 Ga0501037_0001797 3300049573 Bacteria 15585
174 Ga0501037_0006527 3300049573 Bacteria 8536
175 Ga0501037_0041073 3300049573 Bacteria 3402
176 Ga0501037_0054983 3300049573 Bacteria 2911
177 Ga0501037_0103703 3300049573 Bacteria 2051
178 Ga0501038_0011470 3300049574 Bacteria 8085
179 Ga0501038_0041571 3300049574 Bacteria 4008
180 Ga0501038_0042573 3300049574 Bacteria 3955
181 Ga0501039_0029426 3300049575 Bacteria 4231
182 Ga0501041_0001751 3300049577 Bacteria 12172
183 Ga0501042_0088364 3300049578 Bacteria 2223
184 Ga0501043_0027807 3300049579 Bacteria 4439
185 Ga0501043_0044867 3300049579 Bacteria 3476
186 Ga0501046_0013671 3300049580 Bacteria 6863
187 Ga0501047_0000217 3300049581 Bacteria 69120
188 Ga0501047_0011300 3300049581 Bacteria 8452
189 Ga0501067_0084798 3300049583 Bacteria 1757
190 Ga0501068_0005290 3300049584 Bacteria 7051
191 Ga0501070_0001722 3300049586 Bacteria 19349
192 Ga0501071_0030818 3300049587 Bacteria 3795
193 Ga0501074_0000779 3300049590 Bacteria 20132
194 Ga0501074_0026652 3300049590 Bacteria 4190
195 Ga0501077_0016323 3300049593 Bacteria 4680
196 Ga0501083_0001134 3300049744 Bacteria 17865
197 Ga0501035_0000861 3300049822 Bacteria 32362
198 Ga0501035_0074079 3300049822 Bacteria 3012
199 Ga0501035_0110330 3300049822 Bacteria 2411
200 Ga0501044_0002961 3300049823 Bacteria 19311
201 Ga0501044_0005467 3300049823 Bacteria 14109
202 Ga0501044_0005648 3300049823 Bacteria 13876
203 Ga0501044_0067297 3300049823 Bacteria 3650
204 Ga0501045_0146659 3300049824 Bacteria 1755
205 Ga0500641_0034643 3300053096 Bacteria 2011
206 Ga0500560_004082 3300053107 Bacteria 3053
207 Ga0501084_0094331 3300054114 Bacteria 2512
208 Ga0466962_0013541 3300061719 Bacteria 3927
209 Ga0466962_0017398 3300061719 Bacteria 3460
210 Ga0530510_0118689 3300061734 Bacteria 1941
211 3006426742 3006425503 Bacteria 6491253
212 2508673781 2508501039 Bacteria 9978592
213 2517764240 2517572101 Bacteria 6884336
214 2547407029 2547132111 Bacteria 8013147
215 2554258374 2554235005 Bacteria 6457341
216 2585299953 2582581312 Bacteria 7308206
217 2585311543 2582581313 Bacteria 10042643
218 2585315839 2582581314 Bacteria 11452267
219 2616697587 2616644814 Bacteria 11555299
220 2623588177 2622736626 Bacteria 7181580
221 2643944499 2643221587 Bacteria 7586415
222 2644013417 2643221601 Bacteria 7493239
223 2644179403 2643221631 Bacteria 8168043
224 2644264638 2643221647 Bacteria 10741251
225 2644385575 2643221670 Bacteria 6497041
226 2644431397 2643221677 Bacteria 7584031
227 2644436614 2643221678 Bacteria 9540101
228 2676492123 2675903060 Bacteria 10051191
229 2686538816 2684623035 Bacteria 8032739
230 2689994243 2687453743 Bacteria 8361025
231 2784588069 2784132148 Bacteria 8627943
232 2785368842 2784746768 Bacteria 10036182
233 2786670028 2786546132 Bacteria 10419719
234 2793982109 2791355406 Bacteria 11364898
235 2804847620 2802429296 Bacteria 7227771
236 2808841506 2808606359 Bacteria 9866990
237 2808920066 2808606375 Bacteria 9466072
238 2809231669 2808606448 Bacteria 8656184
239 2812358741 2811994879 Bacteria 9313447
240 2819742681 2818991472 Bacteria 10089953
241 2852641968 2852635781 Bacteria 8251373
242 2862184706 2862178590 Bacteria 8583590
243 2862287871 2862281513 Bacteria 9621493
244 2862296953 2862290372 Bacteria 7471434
245 2862511508 2862507626 Bacteria 9425308
246 2862579787 2862574272 Bacteria 10567477
247 2867352961 2867346516 Bacteria 7608576
248 2867371419 2867369537 Bacteria 6501581
249 2867475375 2867475112 Bacteria 6909112
250 2869066141 2869061728 Bacteria 7112407
251 2873156304 2873151551 Bacteria 8625867
252 2877681674 2877676314 Bacteria 9512378
253 2884698261 2884693830 Bacteria 11273186
254 2895436895 2895427314 Bacteria 13147766
255 2895450852 2895442618 Bacteria 11027144
256 2895890182 2895880812 Bacteria 11255272
257 2918504010 2918501144 Bacteria 8668083
258 2919473494 2919468124 Bacteria 9133025
259 2935394660 2935390628 Bacteria 7043367
260 2946067137 2946064051 Bacteria 8957905
261 2946075422 2946072368 Bacteria 8999607
262 2947230103 2947224130 Bacteria 9938529
263 2954386818 2954380949 Bacteria 10050426
264 2954676370 2954673503 Bacteria 9685905
265 2954687798 2954682443 Bacteria 9862841
266 2954697635 2954691527 Bacteria 10720516
267 2954704580 2954701450 Bacteria 10834262
268 2954716776 2954711539 Bacteria 10867210
269 2954726723 2954721474 Bacteria 10456478
270 2954735072 2954731030 Bacteria 10243860
271 2954745646 2954740390 Bacteria 10229294
272 2954764620 2954759201 Bacteria 9358192
273 2990060719 2990059506 Bacteria 9321252
274 2990089920 2990088156 Bacteria 6657676
275 2995471314 2995463766 Bacteria 8577691
276 2997456728 2997451912 Bacteria 8492419
277 3006321700 3006321560 Bacteria 8247479
278 8002778893 8002775197 Bacteria 10728764
279 8002784157 8002784119 Bacteria 9788632
280 8008579349 8008574985 Bacteria 7815457
281 8023631069 8023623736 Bacteria 8593882
282 8025417323 8025413630 Bacteria 7014048
283 8025482874 8025478263 Bacteria 8209203
284 8025533228 8025530807 Bacteria 8495698
285 8047898659 8047893842 Bacteria 11723082
286 8048136025 8048127548 Bacteria 11053136
287 8048360260 8048356638 Bacteria 11044339
288 8048375621 8048369669 Bacteria 11666822
289 8048382584 8048379754 Bacteria 11877923
290 8054162840 8054160619 Bacteria 7783213
291 8056451433 8056447290 Bacteria 7680491
292 8056667811 8056667051 Bacteria 6953971
293 8056830278 8056829672 Bacteria 9045328
294 rootL2_10038729
295 JGI25160J50197_1020641
296 JGI25160J50197_1022730
297 Ga0006562J51391_1053633
298 Ga0006562J51391_1053634
299 Ga0070711_100086869
300 Ga0068853_100017921
301 Ga0068856_100048775
302 Ga0068859_100037826
303 Ga0068863_100000648
304 Ga0068858_100009162
305 Ga0097620_100037827
306 Ga0105251_10010199
307 Ga0105245_10168935
308 Ga0105248_10000039
309 Ga0157372_10243700
310 Ga0182008_10002988
311 Ga0182007_10003775
312 Ga0182005_1009270
313 Ga0183367_1006
314 Ga0207426_1002143
315 Ga0207426_1003031
316 Ga0207426_1012179
317 Ga0207699_10031615
318 Ga0207650_10246366
319 Ga0207711_10000151
320 Ga0207667_10272933
321 Ga0207703_10171932
322 Ga0207639_10014960
323 Ga0207641_10017942
324 Ga0307517_10007767
325 Ga0307517_10081535
326 Ga0307515_10002392
327 Ga0268256_1006529
328 Ga0307511_10003393
329 Ga0307512_10002125
330 Ga0307512_10094598
331 Ga0307509_10019616
332 Ga0307509_10037317
333 Ga0307508_10003430
334 Ga0307508_10006789
335 Ga0307508_10048902
336 Ga0307514_10061092
337 Ga0307516_10025259
338 Ga0307516_10085245
339 Ga0307516_10174917
340 Ga0307518_10052985
341 Ga0307507_10022888
342 Ga0307507_10093851
343 Ga0307510_10029313
344 Ga0307510_10047456
345 Ga0395898_0231520
346 Ga0439436_0000659
347 Ga0439439_0006878
348 Ga0439433_0004550
349 Ga0439433_0008007
350 Ga0439449_0000445
351 Ga0439457_001579
352 Ga0439462_0000543
353 Ga0439462_0014690
354 Ga0466969_0009663
355 Ga0466969_0011501
356 Ga0466972_0003873
357 Ga0466965_0015983
358 Ga0466965_0025769
359 Ga0466965_0036012
360 Ga0466966_0006246
361 Ga0466966_0007580
362 Ga0466961_0001498
363 Ga0466961_0039591
364 Ga0466963_0000522
365 Ga0466963_0001178
366 Ga0466971_0001322
367 Ga0466971_0030100
368 Ga0466971_0039482
369 Ga0466970_0003479
370 Ga0466957_0008360
371 Ga0466960_0018337
372 Ga0466959_0013795
373 Ga0466959_0026660
374 Ga0466958_0020778
375 Ga0495592_0003075
376 Ga0495603_0009524
377 Ga0495629_0003311
378 Ga0495629_0010777
379 Ga0495629_0023883
380 Ga0495629_0036919
381 Ga0495629_0068410
382 Ga0495629_0153120
383 Ga0495638_0018328
384 Ga0495651_0001366
385 Ga0495651_0093836
386 Ga0495662_0012565
387 Ga0495662_0052089
388 Ga0495664_0039626
389 Ga0495594_0000495
390 Ga0495594_0025963
391 Ga0495594_0059912
392 Ga0495583_0013922
393 Ga0495606_0030421
394 Ga0495610_0017093
395 Ga0495618_0003994
396 Ga0495620_0007567
397 Ga0495628_0017735
398 Ga0495630_0085102
399 Ga0495631_0006654
400 Ga0495632_0022272
401 Ga0495648_0046216
402 Ga0495652_0036256
403 Ga0495640_0023485
404 Ga0495640_0043482
405 Ga0495640_0083791
406 Ga0495587_0009885
407 Ga0495609_0047067
408 Ga0495645_0011020
409 Ga0495622_0012909
410 Ga0495622_0032860
411 Ga0495633_0007062
412 Ga0495667_0100435
413 Ga0495634_0001721
414 Ga0495625_0165913
415 Ga0495635_0004309
416 Ga0495635_0149881
417 Ga0495588_0002745
418 Ga0495588_0019929
419 Ga0495657_0001931
420 Ga0495657_0008183
421 Ga0495646_0001686
422 Ga0495658_0060511
423 Ga0495613_0006490
424 Ga0495613_0011832
425 Ga0495649_0011137
426 Ga0495589_0008055
427 Ga0495581_0018038
428 Ga0495581_0034379
429 Ga0495604_0004186
430 Ga0495604_0038885
431 Ga0495636_0011222
432 Ga0495674_0068524
433 Ga0495674_0090453
434 Ga0495676_0021624
435 Ga0495676_0023827
436 Ga0495683_0019999
437 Ga0495687_019461
438 Ga0495675_0007856
439 Ga0495675_0018228
440 Ga0495675_0034251
441 Ga0495685_006061
442 Ga0495685_011501
443 Ga0495681_0000354
444 Ga0495593_0003781
445 Ga0495614_0010218
446 Ga0495614_0024367
447 Ga0495626_0008906
448 Ga0496109_0100741
449 Ga0496116_0000174
450 Ga0496117_0020393
451 Ga0496118_0003646
452 Ga0496118_0032104
453 Ga0496119_0006195
454 Ga0496121_0014016
455 Ga0495678_015347
456 Ga0501031_0009073
457 Ga0501033_0001126
458 Ga0501033_0002148
459 Ga0501033_0025198
460 Ga0501033_0041518
461 Ga0501033_0123609
462 Ga0501034_0001336
463 Ga0501034_0099764
464 Ga0501036_0000215
465 Ga0501036_0022181
466 Ga0501037_0001797
467 Ga0501037_0006527
468 Ga0501037_0041073
469 Ga0501037_0054983
470 Ga0501037_0103703
471 Ga0501038_0011470
472 Ga0501038_0041571
473 Ga0501038_0042573
474 Ga0501039_0029426
475 Ga0501041_0001751
476 Ga0501042_0088364
477 Ga0501043_0027807
478 Ga0501043_0044867
479 Ga0501046_0013671
480 Ga0501047_0000217
481 Ga0501047_0011300
482 Ga0501067_0084798
483 Ga0501068_0005290
484 Ga0501070_0001722
485 Ga0501071_0030818
486 Ga0501074_0000779
487 Ga0501074_0026652
488 Ga0501077_0016323
489 Ga0501083_0001134
490 Ga0501035_0000861
491 Ga0501035_0074079
492 Ga0501035_0110330
493 Ga0501044_0002961
494 Ga0501044_0005467
495 Ga0501044_0005648
496 Ga0501044_0067297
497 Ga0501045_0146659
498 Ga0500641_0034643
499 Ga0500560_004082
500 Ga0501084_0094331
501 Ga0466962_0013541
502 Ga0466962_0017398
503 Ga0530510_0118689
504 3006426742
505 2508673781
506 2517764240
507 2547407029
508 2554258374
509 2585299953
510 2585311543
511 2585315839
512 2616697587
513 2623588177
514 2643944499
515 2644013417
516 2644179403
517 2644264638
518 2644385575
519 2644431397
520 2644436614
521 2676492123
522 2686538816
523 2689994243
524 2784588069
525 2785368842
526 2786670028
527 2793982109
528 2804847620
529 2808841506
530 2808920066
531 2809231669
532 2812358741
533 2819742681
534 2852641968
535 2862184706
536 2862287871
537 2862296953
538 2862511508
539 2862579787
540 2867352961
541 2867371419
542 2867475375
543 2869066141
544 2873156304
545 2877681674
546 2884698261
547 2895436895
548 2895450852
549 2895890182
550 2918504010
551 2919473494
552 2935394660
553 2946067137
554 2946075422
555 2947230103
556 2954386818
557 2954676370
558 2954687798
559 2954697635
560 2954704580
561 2954716776
562 2954726723
563 2954735072
564 2954745646
565 2954764620
566 2990060719
567 2990089920
568 2995471314
569 2997456728
570 3006321700
571 8002778893
572 8002784157
573 8008579349
574 8023631069
575 8025417323
576 8025482874
577 8025533228
578 8047898659
579 8048136025
580 8048360260
581 8048375621
582 8048382584
583 8054162840
584 8056451433
585 8056667811
586 8056830278

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13087

AAA_12

AAA domain

335

457

0.85

PF13086

AAA_11

AAA domain

70

159

0.81

PF13604

AAA_30

AAA domain

71

243

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fz4-assembly1.cif.gz_A crystal structure of the n-terminal half of archaeoglobus fulgidus xpb 0.7376 9 128
4db2-assembly1.cif.gz_C mss116p dead-box helicase domain 2 bound to an rna duplex 0.6869 30 124
7nio-assembly1.cif.gz_E crystal structure of the sars-cov-2 helicase apo form 0.6645 1 396
5jxt-assembly1.cif.gz_C crystal structure of mtiswi bound with histone h4 tail 0.66 40 126
2gjk-assembly1.cif.gz_A structural and functional insights into the human upf1 helicase core 0.6588 10 396
ID Description Score Start End Superfamily
af_A0A0R0JI10_1_123_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7526 311 384 3.40.50.300
af_Q9U3F2_856_1067_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7417 202 433 3.40.50.300
4b3gB03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7403 202 430 3.40.50.300
af_Q9U3F2_856_1067_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7386 202 433 3.40.50.300
af_O50466_942_1122_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7382 202 400 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6G3WTQ4-F1-model_v4 Helicase 0.9401 260 433 GO:0004386
AF-A0A6G3WTQ4-F1-model_v4 Helicase 0.9349 260 433 GO:0004386
AF-A0A6G2UH03-F1-model_v4 Helicase 0.9327 264 433 GO:0004386
AF-A0A6G2UH03-F1-model_v4 Helicase 0.9275 264 433 GO:0004386
AF-A0A2N5XIH9-F1-model_v4 Helicase 0.9247 270 433 GO:0004386

Map