F391479

General Info

Members Datasets Scaffolds Average Seq Length
293 149 586 428

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10029512|Ga0105237_100295124
Length 485
Sequence LDSPVWVRTDGEMNSITLLGDTQVFRRLRSDFADLRLRAGIWTALVQIAAWLTGAVLYETGHRFGNWLAVGALAAVAAYGERDHITLRAKITVSISLLPAIFAAVLFGPLAAMVVFGASAVSISIPLPGKICYVGTRALTGALAAGSVAVVSSIAPVGTGRTVAAAGVAALVAEVSDTVFAAVTYWLRGIGSWKDVAGDSLPVIAASVPFYGFAVALLALSYENVSPWTLPLFYVPALGAQRWFLLYQEQRRLAEDLKGANEQLRAANLSFARGLIATLDARDRYTAGHSAAVAIYARDIAERMGMDPVQQELAHLCGLVHDIGKIGLPAGLLEKPGALTLDERREMQRHSEIGEGILANVDTYAEIASIVRHHHERVDGQGYPDGLSGTDIPLLSRIIAVADAYNAMTSDRPYRDAMPSRVARLRLAQAVETQFDTSIVAAFEAILAGVDENYRTAKGPEFALDRRELEDDRSVDETRATVAIA

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
57 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
60 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
61 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
64 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
71 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
82 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
87 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
94 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
95 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
101 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
102 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
127 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
128 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
134 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
135 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
136 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
137 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
145 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.66
Metatranscriptomes 0.34
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.48
Rhizosphere 93.17
Stem 0
Stem Tuber 0
Unclassified 23.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10029512 3300009545 Bacteria 5574
2 Ga0070658_10014379 3300005327 Bacteria 6349
3 Ga0070658_10062757 3300005327 Bacteria 3028
4 Ga0070683_100104899 3300005329 Unclassified 2664
5 Ga0070660_100021414 3300005339 Unclassified 4768
6 Ga0070660_100174581 3300005339 Bacteria 1737
7 Ga0070661_100006643 3300005344 Bacteria 7978
8 Ga0070674_100058929 3300005356 Unclassified 2671
9 Ga0070659_100011436 3300005366 Bacteria 6565
10 Ga0070667_100007552 3300005367 Bacteria 9017
11 Ga0070714_100009735 3300005435 Bacteria 7572
12 Ga0070714_100064304 3300005435 Bacteria 3157
13 Ga0070708_100001830 3300005445 Bacteria 16302
14 Ga0070681_10003807 3300005458 Bacteria 14180
15 Ga0070681_10142751 3300005458 Unclassified 2324
16 Ga0070706_100115546 3300005467 Bacteria 2499
17 Ga0070707_100013045 3300005468 Bacteria 7766
18 Ga0070699_100024483 3300005518 Bacteria 5203
19 Ga0070679_100030416 3300005530 Bacteria 5331
20 Ga0070679_100233517 3300005530 Unclassified 1798
21 Ga0070684_100040211 3300005535 Unclassified 4025
22 Ga0068853_100042940 3300005539 Unclassified 3867
23 Ga0068855_100067390 3300005563 Bacteria 4170
24 Ga0068855_100271228 3300005563 Unclassified 1887
25 Ga0068854_100114411 3300005578 Bacteria 2039
26 Ga0068856_100175299 3300005614 Unclassified 2156
27 Ga0068852_100012386 3300005616 Bacteria 6474
28 Ga0068852_100061171 3300005616 Unclassified 3272
29 Ga0081539_10000952 3300005985 Bacteria 54279
30 Ga0070717_10007419 3300006028 Bacteria 8144
31 Ga0075436_100109560 3300006914 Unclassified 1927
32 Ga0105240_10134764 3300009093 Unclassified 2958
33 Ga0105240_10154646 3300009093 Unclassified 2729
34 Ga0105240_10265553 3300009093 Unclassified 1978
35 Ga0105245_10013367 3300009098 Bacteria 7155
36 Ga0114129_10152941 3300009147 Bacteria 3157
37 Ga0105242_10018476 3300009176 Bacteria 5450
38 Ga0105237_10039347 3300009545 Unclassified 4774
39 Ga0105238_10018967 3300009551 Bacteria 7006
40 Ga0105238_10287625 3300009551 Bacteria 1626
41 Ga0157370_10199930 3300013104 Unclassified 1854
42 Ga0157369_10003208 3300013105 Bacteria 19503
43 Ga0157369_10008209 3300013105 Bacteria 11974
44 Ga0157369_10060422 3300013105 Bacteria 4087
45 Ga0157369_10076056 3300013105 Bacteria 3599
46 Ga0157374_10038859 3300013296 Unclassified 4377
47 Ga0157374_10044272 3300013296 Bacteria 4114
48 Ga0157372_10022786 3300013307 Bacteria 6780
49 Ga0157372_10072644 3300013307 Bacteria 3877
50 Ga0157380_10130828 3300014326 Bacteria 2141
51 Ga0157376_10136433 3300014969 Bacteria 2196
52 Ga0206356_10565704 3300020070 Unclassified 2552
53 Ga0207705_10012239 3300025909 Bacteria 6199
54 Ga0207707_10005906 3300025912 Bacteria 10708
55 Ga0207671_10015253 3300025914 Bacteria 6031
56 Ga0207660_10096822 3300025917 Bacteria 2198
57 Ga0207657_10001082 3300025919 Bacteria 28870
58 Ga0207657_10144528 3300025919 Bacteria 1941
59 Ga0207657_10168942 3300025919 Bacteria 1773
60 Ga0207649_10010644 3300025920 Bacteria 5057
61 Ga0207652_10016059 3300025921 Bacteria 6105
62 Ga0207646_10014982 3300025922 Bacteria 7341
63 Ga0207664_10045888 3300025929 Bacteria 3428
64 Ga0207664_10048280 3300025929 Bacteria 3347
65 Ga0207664_10073574 3300025929 Bacteria 2758
66 Ga0207690_10013538 3300025932 Unclassified 4902
67 Ga0207686_10024614 3300025934 Unclassified 3491
68 Ga0207661_10055274 3300025944 Unclassified 3184
69 Ga0207661_10193164 3300025944 Unclassified 1786
70 Ga0207661_10200708 3300025944 Bacteria 1753
71 Ga0207667_10020454 3300025949 Bacteria 7360
72 Ga0207667_10216795 3300025949 Bacteria 1961
73 Ga0207667_10220332 3300025949 Unclassified 1944
74 Ga0207640_10120507 3300025981 Unclassified 1878
75 Ga0207658_10006260 3300025986 Bacteria 8131
76 Ga0207702_10085311 3300026078 Bacteria 2751
77 Ga0207698_10164128 3300026142 Bacteria 1947
78 Ga0265318_10021416 3300028577 Bacteria 2595
79 Ga0265338_10042787 3300028800 Bacteria 4212
80 Ga0265327_10011259 3300031251 Bacteria 6184
81 Ga0265313_10005928 3300031595 Bacteria 8843
82 Ga0265314_10054072 3300031711 Bacteria 2780
83 Ga0373943_0003680 3300035170 Bacteria 6970
84 Ga0373946_0012879 3300035171 Bacteria 3136
85 Ga0373947_0000543 3300035725 Bacteria 22104
86 Ga0373947_0015487 3300035725 Bacteria 4379
87 Ga0373925_0005530 3300037068 Bacteria 9407
88 Ga0373925_0011803 3300037068 Bacteria 6321
89 Ga0373925_0104742 3300037068 Bacteria 2179
90 Ga0395899_0002944 3300037312 Bacteria 13646
91 Ga0395899_0025175 3300037312 Bacteria 4494
92 Ga0395900_0005769 3300037418 Bacteria 12936
93 Ga0395900_0006201 3300037418 Bacteria 12485
94 Ga0395900_0039755 3300037418 Bacteria 4846
95 Ga0395900_0066889 3300037418 Bacteria 3693
96 Ga0395900_0081924 3300037418 Unclassified 3315
97 Ga0395898_0001723 3300037466 Bacteria 28949
98 Ga0395898_0004490 3300037466 Bacteria 15260
99 Ga0395898_0012490 3300037466 Bacteria 8781
100 Ga0395898_0033176 3300037466 Bacteria 5153
101 Ga0395898_0139223 3300037466 Unclassified 2323
102 Ga0395905_0004843 3300037471 Bacteria 13880
103 Ga0395905_0011695 3300037471 Bacteria 8473
104 Ga0395905_0040529 3300037471 Bacteria 4369
105 Ga0395901_0004491 3300038443 Bacteria 14068
106 Ga0395901_0007841 3300038443 Bacteria 10777
107 Ga0395901_0033000 3300038443 Bacteria 5342
108 Ga0395901_0036896 3300038443 Bacteria 5053
109 Ga0395901_0056167 3300038443 Bacteria 4095
110 Ga0395901_0093485 3300038443 Bacteria 3149
111 Ga0451853_2328617 3300041512 Bacteria 1563
112 Ga0466966_0023109 3300044684 Unclassified 4072
113 Ga0466963_0006699 3300044694 Bacteria 6840
114 Ga0466963_0013693 3300044694 Unclassified 4987
115 Ga0466964_0067528 3300044706 Bacteria 1503
116 Ga0466957_0137769 3300044842 Bacteria 1570
117 Ga0466958_0001696 3300045836 Bacteria 10626
118 Ga0466958_0020277 3300045836 Bacteria 3875
119 Ga0466967_0004161 3300045976 Bacteria 9681
120 Ga0466967_0007042 3300045976 Bacteria 8055
121 Ga0466967_0008994 3300045976 Bacteria 7379
122 Ga0466967_0025104 3300045976 Bacteria 4909
123 Ga0466967_0040284 3300045976 Unclassified 4021
124 Ga0466967_0129615 3300045976 Unclassified 2340
125 Ga0495603_0057475 3300046455 Bacteria 2302
126 Ga0495629_0000349 3300046459 Bacteria 39311
127 Ga0495641_0000494 3300046461 Bacteria 33001
128 Ga0495651_0013192 3300046462 Bacteria 6388
129 Ga0495651_0072602 3300046462 Unclassified 2613
130 Ga0495651_0097558 3300046462 Bacteria 2194
131 Ga0495653_0044678 3300046463 Bacteria 3438
132 Ga0495653_0047468 3300046463 Bacteria 3321
133 Ga0495582_0000253 3300046473 Bacteria 29763
134 Ga0495662_0000205 3300046476 Bacteria 24502
135 Ga0495662_0058940 3300046476 Bacteria 1854
136 Ga0495664_0017773 3300046477 Bacteria 4066
137 Ga0495608_0008795 3300046511 Bacteria 7065
138 Ga0495608_0010183 3300046511 Bacteria 6561
139 Ga0495630_0013466 3300046517 Bacteria 5948
140 Ga0495630_0014385 3300046517 Bacteria 5765
141 Ga0495630_0024912 3300046517 Unclassified 4423
142 Ga0495652_0034538 3300046529 Unclassified 4406
143 Ga0495652_0081527 3300046529 Unclassified 2668
144 Ga0495652_0109429 3300046529 Bacteria 2224
145 Ga0495665_0069590 3300046531 Bacteria 1855
146 Ga0495640_0045641 3300046533 Bacteria 3040
147 Ga0495587_0020090 3300046536 Bacteria 4127
148 Ga0495645_0092105 3300046543 Bacteria 2165
149 Ga0495667_0019419 3300046559 Bacteria 4586
150 Ga0495634_0015116 3300046642 Bacteria 5548
151 Ga0495635_0004590 3300046663 Bacteria 9579
152 Ga0495657_0057851 3300046675 Unclassified 2576
153 Ga0495599_0047198 3300046678 Bacteria 2699
154 Ga0495647_0026709 3300046681 Bacteria 2117
155 Ga0495613_0004661 3300046689 Bacteria 10284
156 Ga0495613_0012006 3300046689 Bacteria 6437
157 Ga0495581_0001609 3300047315 Bacteria 12597
158 Ga0495674_0002594 3300047319 Bacteria 17594
159 Ga0495674_0038617 3300047319 Bacteria 4284
160 Ga0495674_0066809 3300047319 Unclassified 3118
161 Ga0495674_0077086 3300047319 Bacteria 2866
162 Ga0495676_0000940 3300047321 Bacteria 24451
163 Ga0495680_0000259 3300047322 Bacteria 58560
164 Ga0495680_0001381 3300047322 Bacteria 26232
165 Ga0495680_0019981 3300047322 Bacteria 5645
166 Ga0495680_0047264 3300047322 Bacteria 3386
167 Ga0495684_0001081 3300047471 Bacteria 22030
168 Ga0495684_0032162 3300047471 Bacteria 4026
169 Ga0495602_0047768 3300048088 Unclassified 3853
170 Ga0496102_0009119 3300048905 Bacteria 8510
171 Ga0496103_0170766 3300048906 Bacteria 1396
172 Ga0496104_0001006 3300048907 Bacteria 24149
173 Ga0496104_0091023 3300048907 Bacteria 2915
174 Ga0496105_0021743 3300048908 Bacteria 5192
175 Ga0496105_0057746 3300048908 Bacteria 3204
176 Ga0496106_0029854 3300048909 Bacteria 4064
177 Ga0496107_0077893 3300048910 Bacteria 2415
178 Ga0496109_0086109 3300048912 Bacteria 2902
179 Ga0496110_0023663 3300048913 Bacteria 5226
180 Ga0496110_0121437 3300048913 Bacteria 2354
181 Ga0496110_0241743 3300048913 Bacteria 1643
182 Ga0496114_0006013 3300048917 Bacteria 9550
183 Ga0496114_0013114 3300048917 Bacteria 6640
184 Ga0496114_0160915 3300048917 Unclassified 1952
185 Ga0496115_0001532 3300048918 Bacteria 16585
186 Ga0496115_0029151 3300048918 Bacteria 4333
187 Ga0496115_0043859 3300048918 Bacteria 3566
188 Ga0496115_0063063 3300048918 Bacteria 2990
189 Ga0501031_0046551 3300049568 Unclassified 2828
190 Ga0501031_0073623 3300049568 Bacteria 2224
191 Ga0501033_0003943 3300049570 Bacteria 12033
192 Ga0501033_0054762 3300049570 Bacteria 2950
193 Ga0501034_0176612 3300049571 Unclassified 2102
194 Ga0501036_0018523 3300049572 Bacteria 5835
195 Ga0501036_0068000 3300049572 Bacteria 3014
196 Ga0501036_0105695 3300049572 Bacteria 2381
197 Ga0501036_0126057 3300049572 Bacteria 2162
198 Ga0501038_0015354 3300049574 Bacteria 6962
199 Ga0501038_0074785 3300049574 Bacteria 2865
200 Ga0501038_0078230 3300049574 Unclassified 2791
201 Ga0501038_0164117 3300049574 Bacteria 1803
202 Ga0501039_0041508 3300049575 Bacteria 3554
203 Ga0501039_0056208 3300049575 Bacteria 3048
204 Ga0501039_0074207 3300049575 Unclassified 2643
205 Ga0501040_0021626 3300049576 Bacteria 4298
206 Ga0501040_0025537 3300049576 Bacteria 3972
207 Ga0501040_0028059 3300049576 Unclassified 3792
208 Ga0501040_0048981 3300049576 Unclassified 2888
209 Ga0501041_0017719 3300049577 Bacteria 4239
210 Ga0501041_0035023 3300049577 Unclassified 3041
211 Ga0501042_0004364 3300049578 Bacteria 9025
212 Ga0501042_0033216 3300049578 Bacteria 3657
213 Ga0501042_0053088 3300049578 Unclassified 2891
214 Ga0501042_0109337 3300049578 Unclassified 1990
215 Ga0501043_0003946 3300049579 Bacteria 12166
216 Ga0501046_0015024 3300049580 Bacteria 6513
217 Ga0501046_0063339 3300049580 Bacteria 2887
218 Ga0501046_0068225 3300049580 Unclassified 2768
219 Ga0501047_0077686 3300049581 Bacteria 3193
220 Ga0501048_0005712 3300049582 Bacteria 9456
221 Ga0501048_0017633 3300049582 Bacteria 5256
222 Ga0501048_0054113 3300049582 Unclassified 2851
223 Ga0501048_0060960 3300049582 Bacteria 2672
224 Ga0501048_0066281 3300049582 Bacteria 2553
225 Ga0501067_0083715 3300049583 Bacteria 1770
226 Ga0501067_0176438 3300049583 Bacteria 1190
227 Ga0501068_0021200 3300049584 Bacteria 3793
228 Ga0501068_0033432 3300049584 Bacteria 3062
229 Ga0501068_0038383 3300049584 Unclassified 2869
230 Ga0501069_0000488 3300049585 Bacteria 18095
231 Ga0501069_0126352 3300049585 Bacteria 1462
232 Ga0501070_0042978 3300049586 Bacteria 3762
233 Ga0501071_0011827 3300049587 Bacteria 5890
234 Ga0501071_0049475 3300049587 Bacteria 3026
235 Ga0501071_0053170 3300049587 Bacteria 2920
236 Ga0501071_0310989 3300049587 Bacteria 1195
237 Ga0501072_0039931 3300049588 Bacteria 3684
238 Ga0501072_0051981 3300049588 Bacteria 3226
239 Ga0501072_0064087 3300049588 Unclassified 2898
240 Ga0501072_0064128 3300049588 Unclassified 2897
241 Ga0501073_0012632 3300049589 Bacteria 6161
242 Ga0501074_0010424 3300049590 Bacteria 6744
243 Ga0501074_0021815 3300049590 Bacteria 4648
244 Ga0501074_0030105 3300049590 Bacteria 3934
245 Ga0501074_0084695 3300049590 Bacteria 2272
246 Ga0501075_0030931 3300049591 Bacteria 3969
247 Ga0501075_0032186 3300049591 Unclassified 3895
248 Ga0501075_0099729 3300049591 Bacteria 2205
249 Ga0501075_0210260 3300049591 Bacteria 1484
250 Ga0501076_0001586 3300049592 Bacteria 15289
251 Ga0501076_0011342 3300049592 Bacteria 6636
252 Ga0501076_0033623 3300049592 Bacteria 4003
253 Ga0501076_0041611 3300049592 Unclassified 3615
254 Ga0501076_0065642 3300049592 Unclassified 2895
255 Ga0501077_0011287 3300049593 Bacteria 5577
256 Ga0501077_0049668 3300049593 Unclassified 2665
257 Ga0501077_0055527 3300049593 Bacteria 2515
258 Ga0501077_0065015 3300049593 Bacteria 2313
259 Ga0501079_0036341 3300049741 Bacteria 3794
260 Ga0501079_0051105 3300049741 Unclassified 3190
261 Ga0501079_0072179 3300049741 Unclassified 2667
262 Ga0501080_0020930 3300049742 Bacteria 6053
263 Ga0501080_0084190 3300049742 Bacteria 2955
264 Ga0501080_0107749 3300049742 Unclassified 2582
265 Ga0501081_0031481 3300049743 Bacteria 3594
266 Ga0501081_0048865 3300049743 Bacteria 2911
267 Ga0501081_0063420 3300049743 Unclassified 2564
268 Ga0501083_0064571 3300049744 Unclassified 2439
269 Ga0501083_0100723 3300049744 Unclassified 1905
270 Ga0501035_0017685 3300049822 Bacteria 6576
271 Ga0501035_0082241 3300049822 Unclassified 2842
272 Ga0501035_0103214 3300049822 Bacteria 2501
273 Ga0501045_0003506 3300049824 Bacteria 10744
274 Ga0501045_0027853 3300049824 Bacteria 4075
275 Ga0501045_0036905 3300049824 Bacteria 3550
276 Ga0501045_0056548 3300049824 Unclassified 2869
277 nmdc:mga08x19_75402_c1 3300050514 Unclassified 2205
278 Ga0495601_0012979 3300053077 Bacteria 5004
279 Ga0495595_0011747 3300053084 Bacteria 3668
280 Ga0495595_0019476 3300053084 Bacteria 2944
281 Ga0495619_0002215 3300053085 Bacteria 12873
282 Ga0495619_0007701 3300053085 Bacteria 6819
283 Ga0501084_0039111 3300054114 Bacteria 3967
284 Ga0501084_0062620 3300054114 Bacteria 3114
285 Ga0501084_0073630 3300054114 Unclassified 2860
286 Ga0501084_0131425 3300054114 Bacteria 2107
287 Ga0501082_0022577 3300060353 Bacteria 5419
288 Ga0501082_0054564 3300060353 Bacteria 3444
289 Ga0501082_0095049 3300060353 Unclassified 2575
290 Ga0501082_0154366 3300060353 Unclassified 1995
291 Ga0530510_0017616 3300061734 Bacteria 5061
292 Ga0530510_0020706 3300061734 Bacteria 4677
293 Ga0530510_0057065 3300061734 Unclassified 2821
294 Ga0105237_10029512
295 Ga0070658_10014379
296 Ga0070658_10062757
297 Ga0070683_100104899
298 Ga0070660_100021414
299 Ga0070660_100174581
300 Ga0070661_100006643
301 Ga0070674_100058929
302 Ga0070659_100011436
303 Ga0070667_100007552
304 Ga0070714_100009735
305 Ga0070714_100064304
306 Ga0070708_100001830
307 Ga0070681_10003807
308 Ga0070681_10142751
309 Ga0070706_100115546
310 Ga0070707_100013045
311 Ga0070699_100024483
312 Ga0070679_100030416
313 Ga0070679_100233517
314 Ga0070684_100040211
315 Ga0068853_100042940
316 Ga0068855_100067390
317 Ga0068855_100271228
318 Ga0068854_100114411
319 Ga0068856_100175299
320 Ga0068852_100012386
321 Ga0068852_100061171
322 Ga0081539_10000952
323 Ga0070717_10007419
324 Ga0075436_100109560
325 Ga0105240_10134764
326 Ga0105240_10154646
327 Ga0105240_10265553
328 Ga0105245_10013367
329 Ga0114129_10152941
330 Ga0105242_10018476
331 Ga0105237_10039347
332 Ga0105238_10018967
333 Ga0105238_10287625
334 Ga0157370_10199930
335 Ga0157369_10003208
336 Ga0157369_10008209
337 Ga0157369_10060422
338 Ga0157369_10076056
339 Ga0157374_10038859
340 Ga0157374_10044272
341 Ga0157372_10022786
342 Ga0157372_10072644
343 Ga0157380_10130828
344 Ga0157376_10136433
345 Ga0206356_10565704
346 Ga0207705_10012239
347 Ga0207707_10005906
348 Ga0207671_10015253
349 Ga0207660_10096822
350 Ga0207657_10001082
351 Ga0207657_10144528
352 Ga0207657_10168942
353 Ga0207649_10010644
354 Ga0207652_10016059
355 Ga0207646_10014982
356 Ga0207664_10045888
357 Ga0207664_10048280
358 Ga0207664_10073574
359 Ga0207690_10013538
360 Ga0207686_10024614
361 Ga0207661_10055274
362 Ga0207661_10193164
363 Ga0207661_10200708
364 Ga0207667_10020454
365 Ga0207667_10216795
366 Ga0207667_10220332
367 Ga0207640_10120507
368 Ga0207658_10006260
369 Ga0207702_10085311
370 Ga0207698_10164128
371 Ga0265318_10021416
372 Ga0265338_10042787
373 Ga0265327_10011259
374 Ga0265313_10005928
375 Ga0265314_10054072
376 Ga0373943_0003680
377 Ga0373946_0012879
378 Ga0373947_0000543
379 Ga0373947_0015487
380 Ga0373925_0005530
381 Ga0373925_0011803
382 Ga0373925_0104742
383 Ga0395899_0002944
384 Ga0395899_0025175
385 Ga0395900_0005769
386 Ga0395900_0006201
387 Ga0395900_0039755
388 Ga0395900_0066889
389 Ga0395900_0081924
390 Ga0395898_0001723
391 Ga0395898_0004490
392 Ga0395898_0012490
393 Ga0395898_0033176
394 Ga0395898_0139223
395 Ga0395905_0004843
396 Ga0395905_0011695
397 Ga0395905_0040529
398 Ga0395901_0004491
399 Ga0395901_0007841
400 Ga0395901_0033000
401 Ga0395901_0036896
402 Ga0395901_0056167
403 Ga0395901_0093485
404 Ga0451853_2328617
405 Ga0466966_0023109
406 Ga0466963_0006699
407 Ga0466963_0013693
408 Ga0466964_0067528
409 Ga0466957_0137769
410 Ga0466958_0001696
411 Ga0466958_0020277
412 Ga0466967_0004161
413 Ga0466967_0007042
414 Ga0466967_0008994
415 Ga0466967_0025104
416 Ga0466967_0040284
417 Ga0466967_0129615
418 Ga0495603_0057475
419 Ga0495629_0000349
420 Ga0495641_0000494
421 Ga0495651_0013192
422 Ga0495651_0072602
423 Ga0495651_0097558
424 Ga0495653_0044678
425 Ga0495653_0047468
426 Ga0495582_0000253
427 Ga0495662_0000205
428 Ga0495662_0058940
429 Ga0495664_0017773
430 Ga0495608_0008795
431 Ga0495608_0010183
432 Ga0495630_0013466
433 Ga0495630_0014385
434 Ga0495630_0024912
435 Ga0495652_0034538
436 Ga0495652_0081527
437 Ga0495652_0109429
438 Ga0495665_0069590
439 Ga0495640_0045641
440 Ga0495587_0020090
441 Ga0495645_0092105
442 Ga0495667_0019419
443 Ga0495634_0015116
444 Ga0495635_0004590
445 Ga0495657_0057851
446 Ga0495599_0047198
447 Ga0495647_0026709
448 Ga0495613_0004661
449 Ga0495613_0012006
450 Ga0495581_0001609
451 Ga0495674_0002594
452 Ga0495674_0038617
453 Ga0495674_0066809
454 Ga0495674_0077086
455 Ga0495676_0000940
456 Ga0495680_0000259
457 Ga0495680_0001381
458 Ga0495680_0019981
459 Ga0495680_0047264
460 Ga0495684_0001081
461 Ga0495684_0032162
462 Ga0495602_0047768
463 Ga0496102_0009119
464 Ga0496103_0170766
465 Ga0496104_0001006
466 Ga0496104_0091023
467 Ga0496105_0021743
468 Ga0496105_0057746
469 Ga0496106_0029854
470 Ga0496107_0077893
471 Ga0496109_0086109
472 Ga0496110_0023663
473 Ga0496110_0121437
474 Ga0496110_0241743
475 Ga0496114_0006013
476 Ga0496114_0013114
477 Ga0496114_0160915
478 Ga0496115_0001532
479 Ga0496115_0029151
480 Ga0496115_0043859
481 Ga0496115_0063063
482 Ga0501031_0046551
483 Ga0501031_0073623
484 Ga0501033_0003943
485 Ga0501033_0054762
486 Ga0501034_0176612
487 Ga0501036_0018523
488 Ga0501036_0068000
489 Ga0501036_0105695
490 Ga0501036_0126057
491 Ga0501038_0015354
492 Ga0501038_0074785
493 Ga0501038_0078230
494 Ga0501038_0164117
495 Ga0501039_0041508
496 Ga0501039_0056208
497 Ga0501039_0074207
498 Ga0501040_0021626
499 Ga0501040_0025537
500 Ga0501040_0028059
501 Ga0501040_0048981
502 Ga0501041_0017719
503 Ga0501041_0035023
504 Ga0501042_0004364
505 Ga0501042_0033216
506 Ga0501042_0053088
507 Ga0501042_0109337
508 Ga0501043_0003946
509 Ga0501046_0015024
510 Ga0501046_0063339
511 Ga0501046_0068225
512 Ga0501047_0077686
513 Ga0501048_0005712
514 Ga0501048_0017633
515 Ga0501048_0054113
516 Ga0501048_0060960
517 Ga0501048_0066281
518 Ga0501067_0083715
519 Ga0501067_0176438
520 Ga0501068_0021200
521 Ga0501068_0033432
522 Ga0501068_0038383
523 Ga0501069_0000488
524 Ga0501069_0126352
525 Ga0501070_0042978
526 Ga0501071_0011827
527 Ga0501071_0049475
528 Ga0501071_0053170
529 Ga0501071_0310989
530 Ga0501072_0039931
531 Ga0501072_0051981
532 Ga0501072_0064087
533 Ga0501072_0064128
534 Ga0501073_0012632
535 Ga0501074_0010424
536 Ga0501074_0021815
537 Ga0501074_0030105
538 Ga0501074_0084695
539 Ga0501075_0030931
540 Ga0501075_0032186
541 Ga0501075_0099729
542 Ga0501075_0210260
543 Ga0501076_0001586
544 Ga0501076_0011342
545 Ga0501076_0033623
546 Ga0501076_0041611
547 Ga0501076_0065642
548 Ga0501077_0011287
549 Ga0501077_0049668
550 Ga0501077_0055527
551 Ga0501077_0065015
552 Ga0501079_0036341
553 Ga0501079_0051105
554 Ga0501079_0072179
555 Ga0501080_0020930
556 Ga0501080_0084190
557 Ga0501080_0107749
558 Ga0501081_0031481
559 Ga0501081_0048865
560 Ga0501081_0063420
561 Ga0501083_0064571
562 Ga0501083_0100723
563 Ga0501035_0017685
564 Ga0501035_0082241
565 Ga0501035_0103214
566 Ga0501045_0003506
567 Ga0501045_0027853
568 Ga0501045_0036905
569 Ga0501045_0056548
570 nmdc:mga08x19_75402_c1
571 Ga0495601_0012979
572 Ga0495595_0011747
573 Ga0495595_0019476
574 Ga0495619_0002215
575 Ga0495619_0007701
576 Ga0501084_0039111
577 Ga0501084_0062620
578 Ga0501084_0073630
579 Ga0501084_0131425
580 Ga0501082_0022577
581 Ga0501082_0054564
582 Ga0501082_0095049
583 Ga0501082_0154366
584 Ga0530510_0017616
585 Ga0530510_0020706
586 Ga0530510_0057065

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13487

HD_5

HD domain

273

439

0.96

PF01966

HD

HD domain

286

408

0.94

PF08668

HDOD

HDOD domain

266

376

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r8z-assembly1.cif.gz_B crystal structure of pa4781 hd-gyp domain from pseudomonas aeruginosa at 2.2a resolution showing a bi-metallic ni ion center 0.7803 216 403
4r8z-assembly1.cif.gz_B crystal structure of pa4781 hd-gyp domain from pseudomonas aeruginosa at 2.2a resolution showing a bi-metallic ni ion center 0.6848 216 403
4mdz-assembly1.cif.gz_A crystal structure of a hd-gyp domain (a cyclic-di-gmp phosphodiesterase) containing a tri-nuclear metal centre 0.6768 193 403
4s1b-assembly3.cif.gz_A crystal structure of l. monocytogenes phosphodiesterase pgph hd domain in complex with cyclic-di-amp 0.6636 229 407
4s1c-assembly3.cif.gz_A crystal structure of l. monocytogenes phosphodiesterase pgph hd domain 0.6591 230 404
ID Description Score Start End Superfamily
4r8zB00 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.7803 216 403 1.10.3210.10
4me4A02 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.7477 226 403 1.10.3210.10
4me4A02 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.6935 226 403 1.10.3210.10
4r8zB00 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.6848 216 403 1.10.3210.10
af_P25552_305_494_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.6074 227 360 1.10.3210.10
ID Description Score Start End GO Terms
AF-H6LJ69-F1-model_v4 Diguanylate cyclase and metal dependent phosphohydrolase 0.8646 226 400 GO:0006355
GO:0016787
AF-A0A841L6Z0-F1-model_v4 HD-GYP domain-containing protein (C-di-GMP phosphodiesterase class II) 0.8641 215 403
AF-A0A1V5VLE7-F1-model_v4 Cyclic di-GMP phosphodiesterase response regulator RpfG (EC 3.1.4.52) 0.8636 194 403 GO:0000160
GO:0071111
AF-A0A7X7Q5W8-F1-model_v4 HD domain-containing protein 0.8613 213 403 GO:0000160
GO:0006355
GO:0016787
AF-A0A2E1RDA2-F1-model_v4 deleted 0.8604 223 405

Map