F391406

General Info

Members Datasets Scaffolds Average Seq Length
293 201 586 137

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_101401313|Ga0070665_1014013132
Length 162
Sequence VSPYESRTSRCRGRWRTPKLLSPEARMIDVAYIALGSNVGDRHAYLARARAAIGSLSRTLIVGESSIEETAPIGPVAQGPYLNQMVAVETSLTPRELLAELQAIEAREGRVRAERWGPRTLDLDIVRFRDQVVDDADLRVPHPELPNRDFWQRELAELGVIE

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
113 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
114 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
115 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
116 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
121 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
122 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
125 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
126 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
127 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
128 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
129 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
130 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
131 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
132 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
133 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
134 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
137 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
140 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
141 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
142 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
145 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
146 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
151 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
152 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
153 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
164 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
165 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
175 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
176 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
177 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
178 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
179 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
180 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
181 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
182 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
183 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
184 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
185 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
186 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
187 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
188 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
189 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
190 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
191 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
194 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
195 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
196 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
197 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
198 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
199 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
200 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
201 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.66
Metatranscriptomes 0.34
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.07
Rhizosphere 96.25
Stem 0
Stem Tuber 0
Unclassified 16.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_101401313 3300005548 Bacteria 708
2 MBSR1b_contig_11021112 2162886012 Bacteria 1578
3 MBSR1b_contig_7690924 2162886012 Bacteria 2106
4 Ga0070658_10004139 3300005327 Bacteria 11878
5 Ga0070658_10053589 3300005327 Bacteria 3274
6 Ga0070658_10613350 3300005327 Bacteria 943
7 Ga0070683_100015180 3300005329 Bacteria 6761
8 Ga0070670_100042150 3300005331 Bacteria 3923
9 Ga0068869_100215418 3300005334 Bacteria 1520
10 Ga0068869_100550976 3300005334 Bacteria 969
11 Ga0070680_100041950 3300005336 Bacteria 3711
12 Ga0070680_100284617 3300005336 Bacteria 1401
13 Ga0070680_100668286 3300005336 Bacteria 893
14 Ga0070682_100978110 3300005337 Unclassified 701
15 Ga0070660_100155912 3300005339 Bacteria 1838
16 Ga0070660_100564500 3300005339 Bacteria 950
17 Ga0070660_101286573 3300005339 Unclassified 620
18 Ga0070689_100817230 3300005340 Bacteria 820
19 Ga0070691_10092918 3300005341 Bacteria 1490
20 Ga0070687_100007055 3300005343 Bacteria 4650
21 Ga0070687_100024242 3300005343 Bacteria 2894
22 Ga0070661_100351957 3300005344 Unclassified 1156
23 Ga0070661_101126930 3300005344 Unclassified 654
24 Ga0070692_10031414 3300005345 Bacteria 2662
25 Ga0070669_100882699 3300005353 Bacteria 763
26 Ga0070675_100120175 3300005354 Bacteria 2232
27 Ga0070675_100833906 3300005354 Bacteria 843
28 Ga0070675_100910520 3300005354 Bacteria 806
29 Ga0070673_100028459 3300005364 Bacteria 4156
30 Ga0070673_100716939 3300005364 Bacteria 919
31 Ga0070659_100017463 3300005366 Bacteria 5403
32 Ga0070667_100055305 3300005367 Bacteria 3352
33 Ga0070667_100221626 3300005367 Bacteria 1684
34 Ga0070709_10169190 3300005434 Bacteria 1526
35 Ga0070701_10007600 3300005438 Bacteria 4642
36 Ga0070701_11393795 3300005438 Bacteria 504
37 Ga0070694_100066080 3300005444 Bacteria 2480
38 Ga0070694_100120140 3300005444 Bacteria 1884
39 Ga0070708_100628535 3300005445 Bacteria 1012
40 Ga0070663_100003128 3300005455 Bacteria 9480
41 Ga0070663_100882792 3300005455 Unclassified 771
42 Ga0070678_100534461 3300005456 Bacteria 1039
43 Ga0070681_10000544 3300005458 Bacteria 31038
44 Ga0070681_10166175 3300005458 Bacteria 2129
45 Ga0070681_10234116 3300005458 Bacteria 1751
46 Ga0070681_10401982 3300005458 Bacteria 1281
47 Ga0068867_100026201 3300005459 Bacteria 4186
48 Ga0068867_100258165 3300005459 Bacteria 1420
49 Ga0070707_101210535 3300005468 Bacteria 721
50 Ga0070698_100069395 3300005471 Bacteria 3538
51 Ga0070699_100116882 3300005518 Bacteria 2344
52 Ga0070699_101340197 3300005518 Unclassified 656
53 Ga0070679_100000443 3300005530 Bacteria 35227
54 Ga0070679_100029522 3300005530 Bacteria 5411
55 Ga0070679_100069369 3300005530 Bacteria 3516
56 Ga0070679_100273897 3300005530 Bacteria 1641
57 Ga0070679_100555201 3300005530 Unclassified 1092
58 Ga0070679_100956703 3300005530 Unclassified 800
59 Ga0070684_101133159 3300005535 Unclassified 735
60 Ga0070697_100079855 3300005536 Bacteria 2694
61 Ga0068853_100842378 3300005539 Bacteria 879
62 Ga0070672_101092308 3300005543 Unclassified 709
63 Ga0070686_100057334 3300005544 Bacteria 2502
64 Ga0070696_100502461 3300005546 Bacteria 965
65 Ga0070693_100667619 3300005547 Bacteria 758
66 Ga0070665_100230340 3300005548 Unclassified 1853
67 Ga0070704_100004192 3300005549 Bacteria 8320
68 Ga0070704_100274425 3300005549 Bacteria 1394
69 Ga0068855_100079417 3300005563 Unclassified 3805
70 Ga0070664_100998892 3300005564 Unclassified 786
71 Ga0068854_100545808 3300005578 Unclassified 982
72 Ga0068856_100005298 3300005614 Bacteria 12725
73 Ga0068856_100648426 3300005614 Unclassified 1076
74 Ga0070702_100137046 3300005615 Bacteria 1554
75 Ga0068852_100047983 3300005616 Unclassified 3647
76 Ga0068852_100379478 3300005616 Bacteria 1386
77 Ga0068859_100063802 3300005617 Bacteria 3715
78 Ga0068859_100400217 3300005617 Bacteria 1469
79 Ga0068859_100508303 3300005617 Bacteria 1300
80 Ga0068859_100915486 3300005617 Bacteria 961
81 Ga0068861_100137001 3300005719 Bacteria 1993
82 Ga0068860_100423138 3300005843 Unclassified 1320
83 Ga0075428_100048267 3300006844 Bacteria 4673
84 Ga0075431_100194340 3300006847 Bacteria 2078
85 Ga0075433_10185807 3300006852 Bacteria 1849
86 Ga0075429_100016919 3300006880 Bacteria 6309
87 Ga0075436_100015703 3300006914 Bacteria 5184
88 Ga0075436_100051957 3300006914 Bacteria 2828
89 Ga0075436_100566322 3300006914 Unclassified 835
90 Ga0097620_100063803 3300006931 Bacteria 3715
91 Ga0097620_100400203 3300006931 Bacteria 1469
92 Ga0097620_100508296 3300006931 Bacteria 1300
93 Ga0097620_100915554 3300006931 Bacteria 961
94 Ga0105240_10036137 3300009093 Bacteria 6358
95 Ga0105240_10461228 3300009093 Bacteria 1420
96 Ga0111539_10775220 3300009094 Bacteria 1116
97 Ga0105245_10081518 3300009098 Bacteria 2958
98 Ga0105245_11783753 3300009098 Unclassified 668
99 Ga0105247_10369314 3300009101 Bacteria 1014
100 Ga0114129_10001393 3300009147 Bacteria 32561
101 Ga0114129_10143717 3300009147 Bacteria 3269
102 Ga0114129_10526707 3300009147 Bacteria 1540
103 Ga0105241_10269782 3300009174 Bacteria 1449
104 Ga0105242_10169167 3300009176 Bacteria 1919
105 Ga0105242_10604732 3300009176 Bacteria 1060
106 Ga0105248_10462087 3300009177 Bacteria 1431
107 Ga0105248_11346001 3300009177 Bacteria 808
108 Ga0105248_12380569 3300009177 Bacteria 603
109 Ga0105238_10753509 3300009551 Unclassified 988
110 Ga0105249_10043381 3300009553 Bacteria 4090
111 Ga0105249_10200608 3300009553 Bacteria 1952
112 Ga0105239_10022755 3300010375 Bacteria 6909
113 Ga0105246_10020625 3300011119 Bacteria 4229
114 Ga0157373_10727467 3300013100 Unclassified 728
115 Ga0157371_10011395 3300013102 Bacteria 6856
116 Ga0157371_10209363 3300013102 Unclassified 1399
117 Ga0157371_10376592 3300013102 Bacteria 1036
118 Ga0157371_10756227 3300013102 Bacteria 730
119 Ga0157370_10050916 3300013104 Bacteria 3957
120 Ga0157369_10021965 3300013105 Bacteria 7132
121 Ga0157369_10267067 3300013105 Bacteria 1784
122 Ga0157374_10145408 3300013296 Bacteria 2303
123 Ga0157372_10005848 3300013307 Bacteria 13101
124 Ga0157372_10071517 3300013307 Bacteria 3907
125 Ga0157372_10569586 3300013307 Bacteria 1320
126 Ga0157372_10765079 3300013307 Unclassified 1123
127 Ga0157372_11796130 3300013307 Unclassified 705
128 Ga0157375_10154573 3300013308 Bacteria 2432
129 Ga0157375_10398308 3300013308 Bacteria 1543
130 Ga0157376_10401869 3300014969 Unclassified 1325
131 Ga0154015_1427858 3300020610 Bacteria 953
132 Ga0207653_10141839 3300025885 Bacteria 879
133 Ga0207699_10066275 3300025906 Bacteria 2192
134 Ga0207705_10003974 3300025909 Bacteria 11243
135 Ga0207705_10360346 3300025909 Bacteria 1121
136 Ga0207705_10541225 3300025909 Unclassified 905
137 Ga0207654_10192767 3300025911 Bacteria 1337
138 Ga0207707_10003323 3300025912 Bacteria 14288
139 Ga0207707_10010094 3300025912 Bacteria 8194
140 Ga0207707_10524456 3300025912 Bacteria 1008
141 Ga0207695_10002761 3300025913 Bacteria 25587
142 Ga0207660_10082601 3300025917 Unclassified 2364
143 Ga0207660_10156416 3300025917 Bacteria 1755
144 Ga0207660_10367303 3300025917 Bacteria 1155
145 Ga0207660_10579118 3300025917 Unclassified 914
146 Ga0207662_10023959 3300025918 Bacteria 3511
147 Ga0207657_10004320 3300025919 Bacteria 15059
148 Ga0207657_10412295 3300025919 Unclassified 1062
149 Ga0207652_10001738 3300025921 Bacteria 19002
150 Ga0207652_10015812 3300025921 Bacteria 6148
151 Ga0207652_10045693 3300025921 Bacteria 3734
152 Ga0207694_10683762 3300025924 Unclassified 865
153 Ga0207659_10201713 3300025926 Bacteria 1589
154 Ga0207659_10367019 3300025926 Unclassified 1198
155 Ga0207659_10876422 3300025926 Bacteria 772
156 Ga0207664_10647548 3300025929 Bacteria 950
157 Ga0207690_10038446 3300025932 Bacteria 3115
158 Ga0207706_10045348 3300025933 Bacteria 3896
159 Ga0207686_10205727 3300025934 Unclassified 1412
160 Ga0207669_10354558 3300025937 Bacteria 1135
161 Ga0207691_10082235 3300025940 Bacteria 2893
162 Ga0207691_10362765 3300025940 Bacteria 1238
163 Ga0207689_10033942 3300025942 Bacteria 4238
164 Ga0207689_10124751 3300025942 Bacteria 2118
165 Ga0207689_10225438 3300025942 Bacteria 1549
166 Ga0207661_10292382 3300025944 Bacteria 1458
167 Ga0207661_10650045 3300025944 Unclassified 969
168 Ga0207667_10001972 3300025949 Bacteria 25704
169 Ga0207667_10497232 3300025949 Unclassified 1237
170 Ga0207668_10308007 3300025972 Unclassified 1310
171 Ga0207640_10010749 3300025981 Bacteria 5164
172 Ga0207658_10507008 3300025986 Bacteria 1075
173 Ga0207677_10309201 3300026023 Bacteria 1309
174 Ga0207678_10000997 3300026067 Bacteria 25795
175 Ga0207708_10244787 3300026075 Bacteria 1443
176 Ga0207708_10384527 3300026075 Bacteria 1158
177 Ga0207702_10010011 3300026078 Bacteria 7950
178 Ga0207648_10095562 3300026089 Bacteria 2600
179 Ga0207648_10254352 3300026089 Bacteria 1566
180 Ga0207675_100179721 3300026118 Bacteria 2026
181 Ga0207675_101462901 3300026118 Bacteria 704
182 Ga0207683_10123300 3300026121 Bacteria 2328
183 Ga0207698_10034790 3300026142 Bacteria 3677
184 Ga0209968_1096700 3300027526 Bacteria 537
185 Ga0268264_10635616 3300028381 Bacteria 1055
186 Ga0307408_100744280 3300031548 Bacteria 885
187 Ga0307405_10481269 3300031731 Unclassified 991
188 Ga0307413_10888402 3300031824 Bacteria 756
189 Ga0307410_10006828 3300031852 Bacteria 6199
190 Ga0307410_10382374 3300031852 Unclassified 1133
191 Ga0307406_10286066 3300031901 Bacteria 1260
192 Ga0307406_10349218 3300031901 Bacteria 1155
193 Ga0307406_10362641 3300031901 Bacteria 1136
194 Ga0307407_10158207 3300031903 Bacteria 1480
195 Ga0307412_10358183 3300031911 Bacteria 1174
196 Ga0307409_100227713 3300031995 Bacteria 1687
197 Ga0307409_100232647 3300031995 Bacteria 1672
198 Ga0307416_100115426 3300032002 Bacteria 2378
199 Ga0307416_100180808 3300032002 Bacteria 1976
200 Ga0307416_100676551 3300032002 Bacteria 1119
201 Ga0307414_10295338 3300032004 Bacteria 1368
202 Ga0307411_10111042 3300032005 Bacteria 1962
203 Ga0307411_10574988 3300032005 Unclassified 965
204 Ga0307415_100078935 3300032126 Bacteria 2343
205 Ga0307415_100208504 3300032126 Bacteria 1557
206 Ga0373937_0832419 3300036401 Bacteria 871
207 Ga0436365_0475701 3300039437 Bacteria 3673
208 Ga0436365_0971335 3300039437 Unclassified 546
209 Ga0439446_0210328 3300042156 Bacteria 659
210 Ga0439434_0160299 3300042435 Unclassified 747
211 Ga0495603_0096070 3300046455 Bacteria 1731
212 Ga0495629_0276199 3300046459 Bacteria 1154
213 Ga0495651_0115886 3300046462 Bacteria 1975
214 Ga0495662_0449498 3300046476 Bacteria 632
215 Ga0495594_0002309 3300046499 Bacteria 9931
216 Ga0495594_0078574 3300046499 Bacteria 1841
217 Ga0495608_0086433 3300046511 Bacteria 2032
218 Ga0495618_0107344 3300046514 Bacteria 1788
219 Ga0495628_0120736 3300046516 Bacteria 2011
220 Ga0495630_0075332 3300046517 Bacteria 2543
221 Ga0495652_0649723 3300046529 Unclassified 714
222 Ga0495609_0302348 3300046538 Bacteria 651
223 Ga0495621_0014402 3300046539 Bacteria 2502
224 Ga0495645_0588809 3300046543 Unclassified 685
225 Ga0495667_0014636 3300046559 Bacteria 5300
226 Ga0495656_0059867 3300046615 Bacteria 1658
227 Ga0495634_0102018 3300046642 Bacteria 1853
228 Ga0495588_0434036 3300046674 Unclassified 689
229 Ga0495599_0051706 3300046678 Bacteria 2574
230 Ga0495623_0207207 3300046679 Bacteria 1124
231 Ga0495647_0339645 3300046681 Unclassified 682
232 Ga0495658_0090244 3300046683 Bacteria 1814
233 Ga0495674_0118506 3300047319 Bacteria 2238
234 Ga0495676_0819512 3300047321 Unclassified 599
235 Ga0495680_0080466 3300047322 Bacteria 2462
236 Ga0495677_0076188 3300047445 Bacteria 1254
237 Ga0495684_0118862 3300047471 Bacteria 1991
238 Ga0495602_0077501 3300048088 Bacteria 2812
239 Ga0495614_0394563 3300048089 Bacteria 649
240 Ga0496102_0284959 3300048905 Bacteria 1557
241 Ga0496104_0028858 3300048907 Bacteria 5144
242 Ga0496106_0028926 3300048909 Bacteria 4130
243 Ga0496108_0007644 3300048911 Bacteria 8752
244 Ga0496109_0019864 3300048912 Bacteria 5929
245 Ga0496110_0011206 3300048913 Bacteria 7327
246 Ga0496111_0044495 3300048914 Bacteria 3191
247 Ga0496112_0054852 3300048915 Bacteria 3916
248 Ga0496113_0016037 3300048916 Bacteria 5169
249 Ga0501292_053065 3300049515 Bacteria 722
250 Ga0501297_019275 3300049520 Bacteria 843
251 Ga0501032_0229141 3300049569 Bacteria 1208
252 Ga0501033_0006099 3300049570 Bacteria 9454
253 Ga0501034_0026781 3300049571 Bacteria 5866
254 Ga0501036_0594272 3300049572 Bacteria 918
255 Ga0501037_0290071 3300049573 Bacteria 1138
256 Ga0501038_0093932 3300049574 Bacteria 2508
257 Ga0501043_0007990 3300049579 Bacteria 8354
258 Ga0501047_0215059 3300049581 Bacteria 1779
259 Ga0501048_0497898 3300049582 Bacteria 874
260 Ga0501067_0129513 3300049583 Bacteria 1404
261 Ga0501067_0437528 3300049583 Bacteria 730
262 Ga0501068_0901575 3300049584 Unclassified 582
263 Ga0501199_009887 3300049650 Bacteria 1014
264 Ga0501224_015606 3300049664 Bacteria 1126
265 Ga0501233_014756 3300049668 Bacteria 1600
266 Ga0501235_001103 3300049669 Bacteria 5641
267 Ga0501242_001391 3300049674 Bacteria 2413
268 Ga0501243_076286 3300049675 Bacteria 645
269 Ga0501249_008380 3300049679 Bacteria 2146
270 Ga0501253_055686 3300049683 Bacteria 840
271 Ga0501221_002010 3300049704 Unclassified 3390
272 Ga0501225_0083633 3300049705 Bacteria 918
273 Ga0501229_009276 3300049706 Bacteria 1235
274 Ga0501234_004570 3300049707 Bacteria 2177
275 Ga0501268_000102 3300049765 Bacteria 7043
276 Ga0501271_064032 3300049768 Bacteria 521
277 Ga0501279_058959 3300049775 Bacteria 625
278 Ga0501035_0142088 3300049822 Bacteria 2086
279 Ga0501044_0009533 3300049823 Bacteria 10572
280 Ga0501045_0419430 3300049824 Bacteria 996
281 nmdc:mga05p37_103517_c1 3300050507 Bacteria 3504
282 nmdc:mga09592_14685_c1 3300050508 Bacteria 6390
283 nmdc:mga06r32_15620_c1 3300050510 Bacteria 6899
284 nmdc:mga06r32_192844_c1 3300050510 Bacteria 2024
285 nmdc:mga0n895_18589_c1 3300050512 Bacteria 6435
286 nmdc:mga0rr50_299835_c1 3300050513 Bacteria 1344
287 nmdc:mga0rr50_344677_c1 3300050513 Bacteria 1252
288 nmdc:mga0rr50_50321_c1 3300050513 Bacteria 3087
289 nmdc:mga08x19_190402_c1 3300050514 Bacteria 1403
290 nmdc:mga08x19_88168_c1 3300050514 Bacteria 2045
291 nmdc:mga0a205_222350_c1 3300050515 Bacteria 1773
292 Ga0530510_0252309 3300061734 Bacteria 1315
293 Ga0530510_0827137 3300061734 Bacteria 707
294 Ga0070665_101401313
295 MBSR1b_contig_11021112
296 MBSR1b_contig_7690924
297 Ga0070658_10004139
298 Ga0070658_10053589
299 Ga0070658_10613350
300 Ga0070683_100015180
301 Ga0070670_100042150
302 Ga0068869_100215418
303 Ga0068869_100550976
304 Ga0070680_100041950
305 Ga0070680_100284617
306 Ga0070680_100668286
307 Ga0070682_100978110
308 Ga0070660_100155912
309 Ga0070660_100564500
310 Ga0070660_101286573
311 Ga0070689_100817230
312 Ga0070691_10092918
313 Ga0070687_100007055
314 Ga0070687_100024242
315 Ga0070661_100351957
316 Ga0070661_101126930
317 Ga0070692_10031414
318 Ga0070669_100882699
319 Ga0070675_100120175
320 Ga0070675_100833906
321 Ga0070675_100910520
322 Ga0070673_100028459
323 Ga0070673_100716939
324 Ga0070659_100017463
325 Ga0070667_100055305
326 Ga0070667_100221626
327 Ga0070709_10169190
328 Ga0070701_10007600
329 Ga0070701_11393795
330 Ga0070694_100066080
331 Ga0070694_100120140
332 Ga0070708_100628535
333 Ga0070663_100003128
334 Ga0070663_100882792
335 Ga0070678_100534461
336 Ga0070681_10000544
337 Ga0070681_10166175
338 Ga0070681_10234116
339 Ga0070681_10401982
340 Ga0068867_100026201
341 Ga0068867_100258165
342 Ga0070707_101210535
343 Ga0070698_100069395
344 Ga0070699_100116882
345 Ga0070699_101340197
346 Ga0070679_100000443
347 Ga0070679_100029522
348 Ga0070679_100069369
349 Ga0070679_100273897
350 Ga0070679_100555201
351 Ga0070679_100956703
352 Ga0070684_101133159
353 Ga0070697_100079855
354 Ga0068853_100842378
355 Ga0070672_101092308
356 Ga0070686_100057334
357 Ga0070696_100502461
358 Ga0070693_100667619
359 Ga0070665_100230340
360 Ga0070704_100004192
361 Ga0070704_100274425
362 Ga0068855_100079417
363 Ga0070664_100998892
364 Ga0068854_100545808
365 Ga0068856_100005298
366 Ga0068856_100648426
367 Ga0070702_100137046
368 Ga0068852_100047983
369 Ga0068852_100379478
370 Ga0068859_100063802
371 Ga0068859_100400217
372 Ga0068859_100508303
373 Ga0068859_100915486
374 Ga0068861_100137001
375 Ga0068860_100423138
376 Ga0075428_100048267
377 Ga0075431_100194340
378 Ga0075433_10185807
379 Ga0075429_100016919
380 Ga0075436_100015703
381 Ga0075436_100051957
382 Ga0075436_100566322
383 Ga0097620_100063803
384 Ga0097620_100400203
385 Ga0097620_100508296
386 Ga0097620_100915554
387 Ga0105240_10036137
388 Ga0105240_10461228
389 Ga0111539_10775220
390 Ga0105245_10081518
391 Ga0105245_11783753
392 Ga0105247_10369314
393 Ga0114129_10001393
394 Ga0114129_10143717
395 Ga0114129_10526707
396 Ga0105241_10269782
397 Ga0105242_10169167
398 Ga0105242_10604732
399 Ga0105248_10462087
400 Ga0105248_11346001
401 Ga0105248_12380569
402 Ga0105238_10753509
403 Ga0105249_10043381
404 Ga0105249_10200608
405 Ga0105239_10022755
406 Ga0105246_10020625
407 Ga0157373_10727467
408 Ga0157371_10011395
409 Ga0157371_10209363
410 Ga0157371_10376592
411 Ga0157371_10756227
412 Ga0157370_10050916
413 Ga0157369_10021965
414 Ga0157369_10267067
415 Ga0157374_10145408
416 Ga0157372_10005848
417 Ga0157372_10071517
418 Ga0157372_10569586
419 Ga0157372_10765079
420 Ga0157372_11796130
421 Ga0157375_10154573
422 Ga0157375_10398308
423 Ga0157376_10401869
424 Ga0154015_1427858
425 Ga0207653_10141839
426 Ga0207699_10066275
427 Ga0207705_10003974
428 Ga0207705_10360346
429 Ga0207705_10541225
430 Ga0207654_10192767
431 Ga0207707_10003323
432 Ga0207707_10010094
433 Ga0207707_10524456
434 Ga0207695_10002761
435 Ga0207660_10082601
436 Ga0207660_10156416
437 Ga0207660_10367303
438 Ga0207660_10579118
439 Ga0207662_10023959
440 Ga0207657_10004320
441 Ga0207657_10412295
442 Ga0207652_10001738
443 Ga0207652_10015812
444 Ga0207652_10045693
445 Ga0207694_10683762
446 Ga0207659_10201713
447 Ga0207659_10367019
448 Ga0207659_10876422
449 Ga0207664_10647548
450 Ga0207690_10038446
451 Ga0207706_10045348
452 Ga0207686_10205727
453 Ga0207669_10354558
454 Ga0207691_10082235
455 Ga0207691_10362765
456 Ga0207689_10033942
457 Ga0207689_10124751
458 Ga0207689_10225438
459 Ga0207661_10292382
460 Ga0207661_10650045
461 Ga0207667_10001972
462 Ga0207667_10497232
463 Ga0207668_10308007
464 Ga0207640_10010749
465 Ga0207658_10507008
466 Ga0207677_10309201
467 Ga0207678_10000997
468 Ga0207708_10244787
469 Ga0207708_10384527
470 Ga0207702_10010011
471 Ga0207648_10095562
472 Ga0207648_10254352
473 Ga0207675_100179721
474 Ga0207675_101462901
475 Ga0207683_10123300
476 Ga0207698_10034790
477 Ga0209968_1096700
478 Ga0268264_10635616
479 Ga0307408_100744280
480 Ga0307405_10481269
481 Ga0307413_10888402
482 Ga0307410_10006828
483 Ga0307410_10382374
484 Ga0307406_10286066
485 Ga0307406_10349218
486 Ga0307406_10362641
487 Ga0307407_10158207
488 Ga0307412_10358183
489 Ga0307409_100227713
490 Ga0307409_100232647
491 Ga0307416_100115426
492 Ga0307416_100180808
493 Ga0307416_100676551
494 Ga0307414_10295338
495 Ga0307411_10111042
496 Ga0307411_10574988
497 Ga0307415_100078935
498 Ga0307415_100208504
499 Ga0373937_0832419
500 Ga0436365_0475701
501 Ga0436365_0971335
502 Ga0439446_0210328
503 Ga0439434_0160299
504 Ga0495603_0096070
505 Ga0495629_0276199
506 Ga0495651_0115886
507 Ga0495662_0449498
508 Ga0495594_0002309
509 Ga0495594_0078574
510 Ga0495608_0086433
511 Ga0495618_0107344
512 Ga0495628_0120736
513 Ga0495630_0075332
514 Ga0495652_0649723
515 Ga0495609_0302348
516 Ga0495621_0014402
517 Ga0495645_0588809
518 Ga0495667_0014636
519 Ga0495656_0059867
520 Ga0495634_0102018
521 Ga0495588_0434036
522 Ga0495599_0051706
523 Ga0495623_0207207
524 Ga0495647_0339645
525 Ga0495658_0090244
526 Ga0495674_0118506
527 Ga0495676_0819512
528 Ga0495680_0080466
529 Ga0495677_0076188
530 Ga0495684_0118862
531 Ga0495602_0077501
532 Ga0495614_0394563
533 Ga0496102_0284959
534 Ga0496104_0028858
535 Ga0496106_0028926
536 Ga0496108_0007644
537 Ga0496109_0019864
538 Ga0496110_0011206
539 Ga0496111_0044495
540 Ga0496112_0054852
541 Ga0496113_0016037
542 Ga0501292_053065
543 Ga0501297_019275
544 Ga0501032_0229141
545 Ga0501033_0006099
546 Ga0501034_0026781
547 Ga0501036_0594272
548 Ga0501037_0290071
549 Ga0501038_0093932
550 Ga0501043_0007990
551 Ga0501047_0215059
552 Ga0501048_0497898
553 Ga0501067_0129513
554 Ga0501067_0437528
555 Ga0501068_0901575
556 Ga0501199_009887
557 Ga0501224_015606
558 Ga0501233_014756
559 Ga0501235_001103
560 Ga0501242_001391
561 Ga0501243_076286
562 Ga0501249_008380
563 Ga0501253_055686
564 Ga0501221_002010
565 Ga0501225_0083633
566 Ga0501229_009276
567 Ga0501234_004570
568 Ga0501268_000102
569 Ga0501271_064032
570 Ga0501279_058959
571 Ga0501035_0142088
572 Ga0501044_0009533
573 Ga0501045_0419430
574 nmdc:mga05p37_103517_c1
575 nmdc:mga09592_14685_c1
576 nmdc:mga06r32_15620_c1
577 nmdc:mga06r32_192844_c1
578 nmdc:mga0n895_18589_c1
579 nmdc:mga0rr50_299835_c1
580 nmdc:mga0rr50_344677_c1
581 nmdc:mga0rr50_50321_c1
582 nmdc:mga08x19_190402_c1
583 nmdc:mga08x19_88168_c1
584 nmdc:mga0a205_222350_c1
585 Ga0530510_0252309
586 Ga0530510_0827137

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01288

HPPK

7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)

32

160

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4m5j-assembly1.cif.gz_A the identification, analysis and structure-based development of novel inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase 0.9691 7 136
1tmm-assembly1.cif.gz_A crystal structure of ternary complex of e.coli hppk(w89a) with mgampcpp and 6-hydroxymethylpterin 0.9661 8 136
6an4-assembly1.cif.gz_A crystal structure of escherichia coli hppk in complex with bisubstrate analogue inhibitor hp-39 (j1f) 0.9641 8 136
3kuh-assembly1.cif.gz_A crystal structure of e. coli hppk(h115a) in complex with ampcpp and hp 0.9639 8 136
5etl-assembly3.cif.gz_C e. coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase complexed with ampcpp and inhibitor at 1.82 angstrom resolution 0.9619 6 136
ID Description Score Start End Superfamily
af_Q4LB35_295_465_3.30.70.560 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.9714 7 136 3.30.70.560
af_Q54YD9_144_293_3.30.70.560 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.9691 7 129 3.30.70.560
af_Q7X7X0_67_217_3.30.70.560 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.9546 7 136 3.30.70.560
af_A0A1D8PN03_274_470_3.30.70.560 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.9482 6 136 3.30.70.560
3mcmB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.9436 7 139 3.30.70.560
ID Description Score Start End GO Terms
AF-A0A838SXQ6-F1-model_v4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (EC 2.7.6.3) 0.9857 6 138 GO:0003848
GO:0005524
GO:0016301
GO:0046654
GO:0046656
AF-A0A353BHJ3-F1-model_v4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (EC 2.7.6.3) 0.9831 6 117 GO:0003848
GO:0005524
GO:0016301
GO:0046654
GO:0046656
AF-A0A433K2Y0-F1-model_v4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) 0.9826 7 136 GO:0003848
GO:0005524
GO:0016301
GO:0046654
GO:0046656
AF-A0A0S7XUS4-F1-model_v4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) 0.981 4 136 GO:0003848
GO:0005524
GO:0016301
GO:0046654
GO:0046656
AF-A0A1G0NLK3-F1-model_v4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (EC 2.7.6.3) 0.9808 6 137 GO:0003848
GO:0005524
GO:0016301
GO:0046654
GO:0046656

Map