F390591

General Info

Members Datasets Scaffolds Average Seq Length
291 159 576 324

Family's Representative Sequence

Representative Sequence 3300049587|Ga0501071_0247140|Ga0501071_0247140_69_1145
Length 358
Sequence MAGIGANSLGAIQNPGSPSGRLESFPVQGAFSRQPSPERTAGLDRGLWLSLRAIRRQLAAMPHDLFLIRLIHHATRRPFPGERLWTSTQLLNPATVRFLRIRNREGCDIYLWPYAGNQNAGYILLDLDHAPPSVLETMRANGHEPCVVLQTSPGHLQAWIHVSMLPLEPASASALGKHLARIYGGDLASTDWRHLGRLAGFTNQKPQRRTASGYAPWVKVLYARAGLASAAEALLQSLMSLPAATERRSHDAVARHQSDHTVTPPHAAPSNMSAARAVEIYQSWIYQWRITERFTQPDWSIVDLWIARKLLSQGMPAEQVQNVLRLASPQFPRRHTDPNNYLRRTVAYARSFPASATD

Samples

Sample ID Description Type Environment
1 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
49 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
50 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
71 3300031018 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
73 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
74 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
77 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
78 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
79 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
82 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
83 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
84 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
85 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
86 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
87 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
88 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
89 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
90 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
95 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
96 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
97 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
98 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
104 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
105 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
106 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
107 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
110 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
111 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
112 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
115 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
118 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
119 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
122 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
123 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
124 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.31
Metatranscriptomes 0.69
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.69
Rhizosphere 98.63
Stem 0
Stem Tuber 0
Unclassified 23.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501071_0247140 3300049587 Bacteria 1346
2 Ga0070682_100156411 3300005337 Unclassified 1570
3 Ga0070709_10013351 3300005434 Plasmid 4616
4 Ga0070709_10042790 3300005434 Bacteria 2799
5 Ga0070709_10238332 3300005434 Unclassified 1305
6 Ga0070714_100034172 3300005435 Plasmid 4257
7 Ga0070714_100143322 3300005435 Bacteria 2147
8 Ga0070714_100399492 3300005435 Unclassified 1299
9 Ga0070713_100034048 3300005436 Plasmid 4088
10 Ga0070713_100063864 3300005436 Bacteria 3089
11 Ga0070713_100097214 3300005436 Plasmid 2544
12 Ga0070713_100175486 3300005436 Unclassified 1923
13 Ga0070713_100208575 3300005436 Bacteria 1768
14 Ga0070713_100394490 3300005436 Unclassified 1291
15 Ga0070710_10016379 3300005437 Bacteria 3771
16 Ga0070710_10043024 3300005437 Plasmid 2500
17 Ga0070710_10047301 3300005437 Unclassified 2399
18 Ga0070710_10076541 3300005437 Unclassified 1942
19 Ga0070710_10168395 3300005437 Bacteria 1363
20 Ga0070710_10230192 3300005437 Bacteria 1183
21 Ga0070711_100010706 3300005439 Bacteria 5684
22 Ga0070711_100022566 3300005439 Unclassified 4081
23 Ga0070711_100066509 3300005439 Plasmid 2525
24 Ga0070711_100277916 3300005439 Bacteria 1324
25 Ga0070708_100054169 3300005445 Bacteria 3562
26 Ga0070708_100235373 3300005445 Bacteria 1719
27 Ga0070685_10042246 3300005466 Plasmid 2601
28 Ga0070706_100301204 3300005467 Bacteria 1496
29 Ga0070707_100114057 3300005468 Bacteria 2622
30 Ga0070699_100066207 3300005518 Bacteria 3136
31 Ga0070699_100247440 3300005518 Unclassified 1592
32 Ga0070697_100295800 3300005536 Bacteria 1391
33 Ga0070672_100350277 3300005543 Bacteria 1259
34 Ga0070665_100241890 3300005548 Bacteria 1805
35 Ga0070664_100076074 3300005564 Plasmid 2884
36 Ga0068864_100103245 3300005618 Bacteria 2531
37 Ga0068864_100105334 3300005618 Bacteria 2506
38 Ga0068863_100044931 3300005841 Bacteria 4192
39 Ga0068863_100086241 3300005841 Bacteria 2975
40 Ga0068863_100148148 3300005841 Unclassified 2245
41 Ga0068858_100192740 3300005842 Unclassified 1926
42 Ga0068858_100534611 3300005842 Unclassified 1134
43 Ga0068860_100035145 3300005843 Plasmid 4809
44 Ga0070717_10032497 3300006028 Plasmid 4206
45 Ga0070717_10067779 3300006028 Plasmid 2970
46 Ga0070717_10093083 3300006028 Bacteria 2547
47 Ga0070717_10099738 3300006028 Unclassified 2464
48 Ga0070716_100041626 3300006173 Plasmid 2560
49 Ga0070716_100173512 3300006173 Bacteria 1409
50 Ga0070712_100060742 3300006175 Plasmid 2667
51 Ga0097621_100273027 3300006237 Unclassified 1486
52 Ga0075428_100134397 3300006844 Plasmid 2690
53 Ga0075430_100061718 3300006846 Bacteria 3149
54 Ga0075431_100083487 3300006847 Bacteria 3298
55 Ga0075433_10118356 3300006852 Bacteria 2351
56 Ga0075434_100181490 3300006871 Bacteria 2125
57 Ga0075436_100045775 3300006914 Plasmid 3017
58 Ga0075436_100049952 3300006914 Bacteria 2886
59 Ga0075436_100120288 3300006914 Bacteria 1837
60 Ga0075435_100087620 3300007076 Bacteria 2565
61 Ga0075435_100128046 3300007076 Bacteria 2123
62 Ga0105245_10067460 3300009098 Bacteria 3240
63 Ga0105245_10114395 3300009098 Unclassified 2513
64 Ga0105247_10092641 3300009101 Unclassified 1920
65 Ga0105247_10202360 3300009101 Bacteria 1335
66 Ga0114129_10146581 3300009147 Bacteria 3233
67 Ga0105241_10390122 3300009174 Unclassified 1219
68 Ga0105237_10096816 3300009545 Plasmid 2942
69 Ga0105237_10304941 3300009545 Bacteria 1595
70 Ga0105238_10157248 3300009551 Bacteria 2248
71 Ga0105239_10124256 3300010375 Plasmid 2867
72 Ga0105246_10116868 3300011119 Bacteria 1970
73 Ga0157374_10057534 3300013296 Bacteria 3631
74 Ga0157374_10101532 3300013296 Bacteria 2758
75 Ga0157378_10035380 3300013297 Unclassified 4417
76 Ga0157378_10041054 3300013297 Bacteria 4104
77 Ga0163162_10099559 3300013306 Bacteria 2998
78 Ga0163162_10126727 3300013306 Bacteria 2660
79 Ga0163162_10135549 3300013306 Bacteria 2573
80 Ga0157375_10712848 3300013308 Unclassified 1156
81 Ga0163163_10043172 3300014325 Bacteria 4419
82 Ga0163163_10154625 3300014325 Unclassified 2338
83 Ga0157377_10035599 3300014745 Bacteria 2732
84 Ga0157379_10459799 3300014968 Unclassified 1176
85 Ga0157379_10467357 3300014968 Bacteria 1166
86 Ga0157376_10321629 3300014969 Bacteria 1471
87 Ga0213873_10003278 3300021358 Bacteria 2900
88 Ga0228598_1020886 3300024227 Bacteria 1289
89 Ga0207653_10013762 3300025885 Plasmid 2535
90 Ga0207692_10003255 3300025898 Bacteria 6321
91 Ga0207692_10026647 3300025898 Plasmid 2714
92 Ga0207692_10037831 3300025898 Unclassified 2363
93 Ga0207692_10045029 3300025898 Bacteria 2205
94 Ga0207692_10206322 3300025898 Bacteria 1158
95 Ga0207699_10014043 3300025906 Plasmid 4117
96 Ga0207699_10047015 3300025906 Unclassified 2528
97 Ga0207699_10052506 3300025906 Unclassified 2413
98 Ga0207699_10057485 3300025906 Unclassified 2322
99 Ga0207699_10223460 3300025906 Unclassified 1286
100 Ga0207699_10228189 3300025906 Bacteria 1274
101 Ga0207684_10317140 3300025910 Bacteria 1344
102 Ga0207663_10016304 3300025916 Unclassified 4116
103 Ga0207663_10053942 3300025916 Plasmid 2514
104 Ga0207663_10056288 3300025916 Unclassified 2472
105 Ga0207663_10090115 3300025916 Bacteria 2033
106 Ga0207646_10088350 3300025922 Bacteria 2773
107 Ga0207646_10162544 3300025922 Unclassified 2015
108 Ga0207687_10071077 3300025927 Bacteria 2486
109 Ga0207700_10024612 3300025928 Plasmid 4169
110 Ga0207700_10077323 3300025928 Plasmid 2585
111 Ga0207700_10089342 3300025928 Bacteria 2428
112 Ga0207700_10095577 3300025928 Unclassified 2357
113 Ga0207700_10267330 3300025928 Unclassified 1466
114 Ga0207700_10358421 3300025928 Unclassified 1271
115 Ga0207664_10033468 3300025929 Plasmid 3949
116 Ga0207664_10102233 3300025929 Unclassified 2369
117 Ga0207664_10109016 3300025929 Bacteria 2300
118 Ga0207670_10043817 3300025936 Bacteria 2958
119 Ga0207665_10037883 3300025939 Bacteria 3209
120 Ga0207665_10131790 3300025939 Unclassified 1775
121 Ga0207665_10281282 3300025939 Bacteria 1238
122 Ga0207703_10102945 3300026035 Unclassified 2423
123 Ga0207703_10107089 3300026035 Unclassified 2379
124 Ga0207703_10582171 3300026035 Unclassified 1057
125 Ga0207641_10033143 3300026088 Bacteria 4292
126 Ga0207641_10105703 3300026088 Bacteria 2487
127 Ga0207648_10212087 3300026089 Bacteria 1719
128 Ga0207676_10052499 3300026095 Bacteria 3187
129 Ga0207676_10481493 3300026095 Bacteria 1175
130 Ga0268266_10098561 3300028379 Bacteria 2572
131 Ga0268264_10048894 3300028381 Plasmid 3518
132 Ga0265334_10021403 3300028573 Bacteria 2640
133 Ga0265318_10019343 3300028577 Bacteria 2763
134 Ga0265318_10019789 3300028577 Bacteria 2725
135 Ga0265338_10094924 3300028800 Bacteria 2452
136 Ga0265338_10192194 3300028800 Unclassified 1546
137 Ga0265324_10022436 3300029957 Bacteria 2256
138 Ga0265773_1001341 3300031018 Bacteria 1298
139 Ga0265760_10019249 3300031090 Unclassified 1967
140 Ga0265330_10021638 3300031235 Bacteria 2931
141 Ga0265332_10027852 3300031238 Bacteria 2474
142 Ga0265320_10023992 3300031240 Bacteria 3235
143 Ga0265325_10015988 3300031241 Plasmid 4202
144 Ga0265325_10021188 3300031241 Bacteria 3576
145 Ga0265329_10012091 3300031242 Bacteria 3116
146 Ga0265340_10018462 3300031247 Bacteria 3596
147 Ga0265340_10021623 3300031247 Bacteria 3299
148 Ga0265340_10027266 3300031247 Bacteria 2881
149 Ga0265339_10036694 3300031249 Bacteria 2741
150 Ga0265339_10130191 3300031249 Unclassified 1287
151 Ga0265331_10008223 3300031250 Bacteria 5950
152 Ga0265331_10028419 3300031250 Plasmid 2797
153 Ga0265331_10031082 3300031250 Bacteria 2655
154 Ga0265316_10048644 3300031344 Bacteria 3345
155 Ga0265316_10060761 3300031344 Bacteria 2936
156 Ga0265316_10071272 3300031344 Bacteria 2679
157 Ga0265316_10114038 3300031344 Bacteria 2044
158 Ga0265316_10288615 3300031344 Bacteria 1197
159 Ga0265313_10033718 3300031595 Bacteria 2598
160 Ga0265342_10043426 3300031712 Bacteria 2712
161 Ga0265342_10045669 3300031712 Bacteria 2636
162 Ga0373926_0026194 3300035083 Bacteria 2038
163 Ga0373926_0065960 3300035083 Bacteria 1325
164 Ga0373936_0026969 3300035113 Bacteria 2252
165 Ga0373946_0015173 3300035171 Plasmid 2917
166 Ga0373946_0063663 3300035171 Bacteria 1576
167 Ga0373955_0149829 3300035172 Bacteria 1373
168 Ga0373935_0052916 3300035692 Bacteria 2582
169 Ga0373927_0008310 3300035695 Bacteria 6987
170 Ga0373927_0037823 3300035695 Bacteria 3135
171 Ga0373927_0041649 3300035695 Bacteria 2978
172 Ga0373927_0050108 3300035695 Bacteria 2699
173 Ga0373947_0015278 3300035725 Plasmid 4407
174 Ga0373947_0034070 3300035725 Bacteria 3011
175 Ga0373947_0043773 3300035725 Bacteria 2674
176 Ga0373947_0099199 3300035725 Bacteria 1828
177 Ga0373947_0121051 3300035725 Bacteria 1662
178 Ga0373937_0123464 3300036401 Bacteria 2414
179 Ga0373925_0021771 3300037068 Plasmid 4673
180 Ga0373925_0046927 3300037068 Bacteria 3213
181 Ga0373925_0068125 3300037068 Bacteria 2685
182 Ga0373925_0076121 3300037068 Bacteria 2544
183 Ga0373925_0219268 3300037068 Bacteria 1518
184 Ga0436364_1522504 3300037853 Unclassified 1659
185 Ga0242420_001211 3300038996 Bacteria 3370
186 Ga0436360_0228349 3300039438 Bacteria 1083
187 Ga0436360_0532513 3300039438 Unclassified 1352
188 Ga0436361_0744397 3300039447 Bacteria 1926
189 Ga0436361_1206948 3300039447 Bacteria 1885
190 Ga0436363_1192842 3300039450 Bacteria 1001
191 Ga0436362_0898899 3300039453 Bacteria 2057
192 Ga0436362_0912818 3300039453 Bacteria 4351
193 Ga0451576_0158134 3300045051 Unclassified 2364
194 Ga0451576_0197277 3300045051 Unclassified 2103
195 Ga0495603_0207140 3300046455 Bacteria 1133
196 Ga0495580_0010299 3300046472 Bacteria 7291
197 Ga0495580_0025751 3300046472 Bacteria 4297
198 Ga0495580_0062030 3300046472 Bacteria 2623
199 Ga0495580_0236658 3300046472 Unclassified 1252
200 Ga0495582_0010111 3300046473 Bacteria 5197
201 Ga0495582_0043354 3300046473 Bacteria 2478
202 Ga0495582_0101463 3300046473 Unclassified 1611
203 Ga0495639_0027565 3300046475 Bacteria 2515
204 Ga0495639_0104420 3300046475 Unclassified 1340
205 Ga0495662_0012286 3300046476 Bacteria 4181
206 Ga0495664_0052060 3300046477 Bacteria 2431
207 Ga0495594_0023274 3300046499 Bacteria 3318
208 Ga0495618_0069171 3300046514 Bacteria 2244
209 Ga0495630_0077161 3300046517 Bacteria 2511
210 Ga0495666_0052219 3300046526 Bacteria 1962
211 Ga0495665_0042487 3300046531 Bacteria 2419
212 Ga0495640_0050604 3300046533 Bacteria 2861
213 Ga0495586_0024117 3300046535 Unclassified 3249
214 Ga0495645_0074592 3300046543 Bacteria 2442
215 Ga0495667_0060721 3300046559 Bacteria 2479
216 Ga0495634_0062949 3300046642 Bacteria 2462
217 Ga0495635_0049493 3300046663 Bacteria 2896
218 Ga0495657_0196215 3300046675 Bacteria 1232
219 Ga0495646_0056415 3300046680 Bacteria 2355
220 Ga0495647_0017596 3300046681 Bacteria 2531
221 Ga0495658_0042284 3300046683 Bacteria 2543
222 Ga0495658_0050786 3300046683 Bacteria 2347
223 Ga0495613_0201356 3300046689 Bacteria 1404
224 Ga0495613_0213011 3300046689 Unclassified 1358
225 Ga0495624_0047669 3300046690 Bacteria 2722
226 Ga0495581_0045279 3300047315 Bacteria 2544
227 Ga0495581_0050531 3300047315 Bacteria 2401
228 Ga0495604_0166791 3300047317 Bacteria 1552
229 Ga0495674_0086244 3300047319 Bacteria 2688
230 Ga0495675_0056829 3300047444 Bacteria 2481
231 Ga0495684_0062365 3300047471 Bacteria 2835
232 Ga0496112_0201762 3300048915 Bacteria 1948
233 Ga0496112_0324082 3300048915 Bacteria 1485
234 Ga0501031_0256503 3300049568 Bacteria 1136
235 Ga0501033_0101832 3300049570 Unclassified 2095
236 Ga0501036_0025084 3300049572 Bacteria 5028
237 Ga0501038_0094156 3300049574 Unclassified 2504
238 Ga0501039_0102865 3300049575 Unclassified 2229
239 Ga0501039_0273375 3300049575 Unclassified 1328
240 Ga0501039_0359570 3300049575 Bacteria 1144
241 Ga0501040_0033221 3300049576 Bacteria 3494
242 Ga0501040_0060377 3300049576 Plasmid 2605
243 Ga0501040_0358052 3300049576 Bacteria 1046
244 Ga0501041_0048557 3300049577 Plasmid 2585
245 Ga0501042_0071532 3300049578 Unclassified 2481
246 Ga0501042_0114049 3300049578 Bacteria 1946
247 Ga0501046_0070946 3300049580 Unclassified 2707
248 Ga0501046_0109532 3300049580 Bacteria 2111
249 Ga0501048_0064428 3300049582 Plasmid 2592
250 Ga0501070_0201763 3300049586 Bacteria 1633
251 Ga0501071_0076000 3300049587 Unclassified 2452
252 Ga0501072_0035086 3300049588 Bacteria 3931
253 Ga0501074_0184535 3300049590 Bacteria 1488
254 Ga0501074_0217140 3300049590 Bacteria 1362
255 Ga0501075_0052994 3300049591 Unclassified 3050
256 Ga0501075_0103888 3300049591 Bacteria 2159
257 Ga0501075_0132051 3300049591 Unclassified 1902
258 Ga0501076_0066532 3300049592 Unclassified 2876
259 Ga0501076_0342022 3300049592 Unclassified 1228
260 Ga0501076_0347782 3300049592 Unclassified 1217
261 Ga0501077_0055104 3300049593 Unclassified 2524
262 Ga0501079_0080790 3300049741 Unclassified 2513
263 Ga0501081_0044752 3300049743 Plasmid 3039
264 Ga0501081_0184865 3300049743 Bacteria 1508
265 Ga0501035_0247102 3300049822 Bacteria 1516
266 Ga0501045_0060456 3300049824 Plasmid 2777
267 Ga0501045_0074237 3300049824 Bacteria 2504
268 Ga0501045_0368438 3300049824 Unclassified 1069
269 nmdc:mga05p37_136234_c1 3300050507 Bacteria 3011
270 nmdc:mga0qj67_80305_c1 3300050509 Bacteria 2613
271 nmdc:mga06r32_126388_c1 3300050510 Unclassified 2526
272 nmdc:mga0n895_398317_c1 3300050512 Bacteria 1392
273 nmdc:mga0rr50_23914_c1 3300050513 Bacteria 4225
274 nmdc:mga0rr50_47442_c1 3300050513 Bacteria 3169
275 nmdc:mga0rr50_58449_c1 3300050513 Bacteria 2890
276 nmdc:mga08x19_114576_c1 3300050514 Bacteria 1801
277 nmdc:mga08x19_167723_c1 3300050514 Bacteria 1494
278 nmdc:mga08x19_37461_c1 3300050514 Plasmid 3078
279 nmdc:mga08x19_46537_c1 3300050514 Bacteria 2775
280 nmdc:mga0a205_437273_c1 3300050515 Bacteria 1169
281 nmdc:mga0a205_64627_c1 3300050515 Bacteria 3535
282 Ga0495612_0031203 3300053078 Bacteria 2148
283 Ga0501084_0081564 3300054114 Plasmid 2713
284 Ga0501084_0281921 3300054114 Unclassified 1403
285 Ga0501082_0049498 3300060353 Bacteria 3624
286 Ga0501082_0101440 3300060353 Unclassified 2489
287 Ga0530510_0069975 3300061734 Unclassified 2546
288 Ga0530510_0135330 3300061734 Bacteria 1814
289 Ga0501071_0247140
290 Ga0070682_100156411
291 Ga0070709_10013351
292 Ga0070709_10042790
293 Ga0070709_10238332
294 Ga0070714_100034172
295 Ga0070714_100143322
296 Ga0070714_100399492
297 Ga0070713_100034048
298 Ga0070713_100063864
299 Ga0070713_100097214
300 Ga0070713_100175486
301 Ga0070713_100208575
302 Ga0070713_100394490
303 Ga0070710_10016379
304 Ga0070710_10043024
305 Ga0070710_10047301
306 Ga0070710_10076541
307 Ga0070710_10168395
308 Ga0070710_10230192
309 Ga0070711_100010706
310 Ga0070711_100022566
311 Ga0070711_100066509
312 Ga0070711_100277916
313 Ga0070708_100054169
314 Ga0070708_100235373
315 Ga0070685_10042246
316 Ga0070706_100301204
317 Ga0070707_100114057
318 Ga0070699_100066207
319 Ga0070699_100247440
320 Ga0070697_100295800
321 Ga0070672_100350277
322 Ga0070665_100241890
323 Ga0070664_100076074
324 Ga0068864_100103245
325 Ga0068864_100105334
326 Ga0068863_100044931
327 Ga0068863_100086241
328 Ga0068863_100148148
329 Ga0068858_100192740
330 Ga0068858_100534611
331 Ga0068860_100035145
332 Ga0070717_10032497
333 Ga0070717_10067779
334 Ga0070717_10093083
335 Ga0070717_10099738
336 Ga0070716_100041626
337 Ga0070716_100173512
338 Ga0070712_100060742
339 Ga0097621_100273027
340 Ga0075428_100134397
341 Ga0075430_100061718
342 Ga0075431_100083487
343 Ga0075433_10118356
344 Ga0075434_100181490
345 Ga0075436_100045775
346 Ga0075436_100049952
347 Ga0075436_100120288
348 Ga0075435_100087620
349 Ga0075435_100128046
350 Ga0105245_10067460
351 Ga0105245_10114395
352 Ga0105247_10092641
353 Ga0105247_10202360
354 Ga0114129_10146581
355 Ga0105241_10390122
356 Ga0105237_10096816
357 Ga0105237_10304941
358 Ga0105238_10157248
359 Ga0105239_10124256
360 Ga0105246_10116868
361 Ga0157374_10057534
362 Ga0157374_10101532
363 Ga0157378_10035380
364 Ga0157378_10041054
365 Ga0163162_10099559
366 Ga0163162_10126727
367 Ga0163162_10135549
368 Ga0157375_10712848
369 Ga0163163_10043172
370 Ga0163163_10154625
371 Ga0157377_10035599
372 Ga0157379_10459799
373 Ga0157379_10467357
374 Ga0157376_10321629
375 Ga0213873_10003278
376 Ga0228598_1020886
377 Ga0207653_10013762
378 Ga0207692_10003255
379 Ga0207692_10026647
380 Ga0207692_10037831
381 Ga0207692_10045029
382 Ga0207692_10206322
383 Ga0207699_10014043
384 Ga0207699_10047015
385 Ga0207699_10052506
386 Ga0207699_10057485
387 Ga0207699_10223460
388 Ga0207699_10228189
389 Ga0207684_10317140
390 Ga0207663_10016304
391 Ga0207663_10053942
392 Ga0207663_10056288
393 Ga0207663_10090115
394 Ga0207646_10088350
395 Ga0207646_10162544
396 Ga0207687_10071077
397 Ga0207700_10024612
398 Ga0207700_10077323
399 Ga0207700_10089342
400 Ga0207700_10095577
401 Ga0207700_10267330
402 Ga0207700_10358421
403 Ga0207664_10033468
404 Ga0207664_10102233
405 Ga0207664_10109016
406 Ga0207670_10043817
407 Ga0207665_10037883
408 Ga0207665_10131790
409 Ga0207665_10281282
410 Ga0207703_10102945
411 Ga0207703_10107089
412 Ga0207703_10582171
413 Ga0207641_10033143
414 Ga0207641_10105703
415 Ga0207648_10212087
416 Ga0207676_10052499
417 Ga0207676_10481493
418 Ga0268266_10098561
419 Ga0268264_10048894
420 Ga0265334_10021403
421 Ga0265318_10019343
422 Ga0265318_10019789
423 Ga0265338_10094924
424 Ga0265338_10192194
425 Ga0265324_10022436
426 Ga0265773_1001341
427 Ga0265760_10019249
428 Ga0265330_10021638
429 Ga0265332_10027852
430 Ga0265320_10023992
431 Ga0265325_10015988
432 Ga0265325_10021188
433 Ga0265329_10012091
434 Ga0265340_10018462
435 Ga0265340_10021623
436 Ga0265340_10027266
437 Ga0265339_10036694
438 Ga0265339_10130191
439 Ga0265331_10008223
440 Ga0265331_10028419
441 Ga0265331_10031082
442 Ga0265316_10048644
443 Ga0265316_10060761
444 Ga0265316_10071272
445 Ga0265316_10114038
446 Ga0265316_10288615
447 Ga0265313_10033718
448 Ga0265342_10043426
449 Ga0265342_10045669
450 Ga0373926_0026194
451 Ga0373926_0065960
452 Ga0373936_0026969
453 Ga0373946_0015173
454 Ga0373946_0063663
455 Ga0373955_0149829
456 Ga0373935_0052916
457 Ga0373927_0008310
458 Ga0373927_0037823
459 Ga0373927_0041649
460 Ga0373927_0050108
461 Ga0373947_0015278
462 Ga0373947_0034070
463 Ga0373947_0043773
464 Ga0373947_0099199
465 Ga0373947_0121051
466 Ga0373937_0123464
467 Ga0373925_0021771
468 Ga0373925_0046927
469 Ga0373925_0068125
470 Ga0373925_0076121
471 Ga0373925_0219268
472 Ga0436364_1522504
473 Ga0242420_001211
474 Ga0436360_0228349
475 Ga0436360_0532513
476 Ga0436361_0744397
477 Ga0436361_1206948
478 Ga0436363_1192842
479 Ga0436362_0898899
480 Ga0436362_0912818
481 Ga0451576_0158134
482 Ga0451576_0197277
483 Ga0495603_0207140
484 Ga0495580_0010299
485 Ga0495580_0025751
486 Ga0495580_0062030
487 Ga0495580_0236658
488 Ga0495582_0010111
489 Ga0495582_0043354
490 Ga0495582_0101463
491 Ga0495639_0027565
492 Ga0495639_0104420
493 Ga0495662_0012286
494 Ga0495664_0052060
495 Ga0495594_0023274
496 Ga0495618_0069171
497 Ga0495630_0077161
498 Ga0495666_0052219
499 Ga0495665_0042487
500 Ga0495640_0050604
501 Ga0495586_0024117
502 Ga0495645_0074592
503 Ga0495667_0060721
504 Ga0495634_0062949
505 Ga0495635_0049493
506 Ga0495657_0196215
507 Ga0495646_0056415
508 Ga0495647_0017596
509 Ga0495658_0042284
510 Ga0495658_0050786
511 Ga0495613_0201356
512 Ga0495613_0213011
513 Ga0495624_0047669
514 Ga0495581_0045279
515 Ga0495581_0050531
516 Ga0495604_0166791
517 Ga0495674_0086244
518 Ga0495675_0056829
519 Ga0495684_0062365
520 Ga0496112_0201762
521 Ga0496112_0324082
522 Ga0501031_0256503
523 Ga0501033_0101832
524 Ga0501036_0025084
525 Ga0501038_0094156
526 Ga0501039_0102865
527 Ga0501039_0273375
528 Ga0501039_0359570
529 Ga0501040_0033221
530 Ga0501040_0060377
531 Ga0501040_0358052
532 Ga0501041_0048557
533 Ga0501042_0071532
534 Ga0501042_0114049
535 Ga0501046_0070946
536 Ga0501046_0109532
537 Ga0501048_0064428
538 Ga0501070_0201763
539 Ga0501071_0076000
540 Ga0501072_0035086
541 Ga0501074_0184535
542 Ga0501074_0217140
543 Ga0501075_0052994
544 Ga0501075_0103888
545 Ga0501075_0132051
546 Ga0501076_0066532
547 Ga0501076_0342022
548 Ga0501076_0347782
549 Ga0501077_0055104
550 Ga0501079_0080790
551 Ga0501081_0044752
552 Ga0501081_0184865
553 Ga0501035_0247102
554 Ga0501045_0060456
555 Ga0501045_0074237
556 Ga0501045_0368438
557 nmdc:mga05p37_136234_c1
558 nmdc:mga0qj67_80305_c1
559 nmdc:mga06r32_126388_c1
560 nmdc:mga0n895_398317_c1
561 nmdc:mga0rr50_23914_c1
562 nmdc:mga0rr50_47442_c1
563 nmdc:mga0rr50_58449_c1
564 nmdc:mga08x19_114576_c1
565 nmdc:mga08x19_167723_c1
566 nmdc:mga08x19_37461_c1
567 nmdc:mga08x19_46537_c1
568 nmdc:mga0a205_437273_c1
569 nmdc:mga0a205_64627_c1
570 Ga0495612_0031203
571 Ga0501084_0081564
572 Ga0501084_0281921
573 Ga0501082_0049498
574 Ga0501082_0101440
575 Ga0530510_0069975
576 Ga0530510_0135330

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22448

RepB_primase_C

RepB DNA-primase C-terminal helical domain

297

349

0.98

PF16793

RepB_primase

RepB DNA-primase N-terminal domain

94

244

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h25-assembly1.cif.gz_A crystal structure of the catalytic domain of primase repb' in complex with initiator dna 0.9349 9 207
3h25-assembly1.cif.gz_A crystal structure of the catalytic domain of primase repb' in complex with initiator dna 0.9112 9 207
6gvu-assembly1.cif.gz_B nmr structure of the dna-bound helix bundle domain from the functional prn1 primase 0.7115 252 309
3h20-assembly1.cif.gz_A crystal structure of primase repb' 0.6802 9 305
3h20-assembly1.cif.gz_A crystal structure of primase repb' 0.6401 9 305
ID Description Score Start End Superfamily
3h20A01 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;RepB DNA-primase, N-terminal domain 0.9398 9 73 3.30.1490.240
3h20A02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RepB DNA-primase, N-terminal domain 0.9232 80 187 3.30.70.1790
3h20A02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RepB DNA-primase, N-terminal domain 0.898 80 187 3.30.70.1790
3h20A01 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;RepB DNA-primase, N-terminal domain 0.8591 9 73 3.30.1490.240
3h20A04 Mainly Alpha;Orthogonal Bundle;Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1; 0.7539 232 305 1.10.1240.50
ID Description Score Start End GO Terms
AF-A0A2V8UUY6-F1-model_v4 RepB-like DNA primase domain-containing protein 0.9736 1 181
AF-A0A2V8UUY6-F1-model_v4 RepB-like DNA primase domain-containing protein 0.9626 1 181
AF-A0A5X9PBY2-F1-model_v4 DNA primase 0.9457 9 194
AF-A0A7C9BCI2-F1-model_v4 RepB-like DNA primase domain-containing protein 0.9209 8 187
AF-A0A7C9MR62-F1-model_v4 Relaxase/mobilization nuclease domain-containing protein 0.8991 9 224

Map