F390135

General Info

Members Datasets Scaffolds Average Seq Length
291 198 240 288

Family's Representative Sequence

Representative Sequence 3300003775|Ga0055524_1000003|Ga0055524_1000003150
Length 338
Sequence MSSTASASLLPQCSADVSPTPRAVLRTVIASATADAAGSPFAAPAMHLHVPARLTALAQRTGGRGATPGAAITPATEGKDKAHKNASRWWGLLLPLAALAAAELAVRSGALPASQLPPPSAVAETIADLARNGLAQHISASTLRVLAGFGAGAVLAIALGAAVGLSRRLSALLDPAFQALRAIPSLAWVPLLLLWLGIDEAPKIVLIAIGAFFPVYMGVASGIRDVDRKLIEVGRLYRLNGIQLARRVLLPASLPAILTGLRNGLSLAWMFMVAAELIAASKGLGYLLSDGRETSRADIVIAAIVLLAILGKISDGIMHRAETRLLHWRDSYGSGAAR

Samples

Sample ID Description Type Environment
1 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
2 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
3 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
4 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
5 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
6 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
7 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
8 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
9 2519103095 Burkholderia sp. KJ006 Isolate Nodule
10 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
11 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
12 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
13 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
14 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
15 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
16 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
17 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
18 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
19 2738541357 Duganella sp. GV053 Isolate Unclassified
20 2738543003 Duganella sp. GV066 Isolate Unclassified
21 2738543026 Duganella sp. GV089 Isolate Unclassified
22 2738543029 Duganella sp. GV039 Isolate Unclassified
23 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
24 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
25 2818991450 Burkholderia sp. 604 Isolate Unclassified
26 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
27 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
28 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
29 2857558681 Duganella sp. R-74565 Isolate Unclassified
30 2857564685 Duganella sp. R-74599 Isolate Unclassified
31 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
32 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
33 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
34 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
35 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
36 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
37 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
38 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
39 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
40 2904564687 Burkholderia sp. 571 Isolate Unclassified
41 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
42 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
43 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
44 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
45 2928170801 Burkholderia sp. 572 Isolate Unclassified
46 2928503688 Paraburkholderia terricola 1263 Isolate Rhizosphere
47 2928536128 Burkholderia sola 565 Isolate Unclassified
48 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
49 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
50 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
51 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
52 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
53 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
54 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
55 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
56 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
57 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
58 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
59 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
60 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
61 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
62 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
63 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
64 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
67 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
70 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
71 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
75 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
80 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
94 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
95 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
99 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
106 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
107 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
108 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
116 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
122 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
126 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
127 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
134 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
137 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
142 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
145 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
146 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
147 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
148 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
149 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
152 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
155 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
156 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
157 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
158 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
159 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
160 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
161 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
162 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
163 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
164 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
165 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
166 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
167 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
168 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
169 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
170 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
171 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
172 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
173 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
174 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
175 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
176 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
177 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
178 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
179 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
180 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
181 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
182 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
183 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
184 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
185 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
186 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
187 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
188 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
189 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
190 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
191 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
192 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
193 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
194 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
195 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
196 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
197 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
198 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.47
Metatranscriptomes 0
Isolates 17.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.12
Nodule 3.78
Rhizoplane 5.84
Rhizosphere 53.61
Stem 0
Stem Tuber 0
Unclassified 21.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10051970 3300003187 Bacteria 1382
2 JGI25153J46596_10038697 3300003215 Bacteria 1499
3 rootH1_10041360 3300003316 Bacteria 3203
4 rootH1_10061689 3300003316 Bacteria 3536
5 rootH2_10049823 3300003320 Bacteria 11006
6 rootH2_10113953 3300003320 Bacteria 2473
7 rootL2_10007027 3300003322 Bacteria 10464
8 rootL2_10098931 3300003322 Bacteria 4474
9 rootL2_10267543 3300003322 Bacteria 1835
10 rootH1_10264875 3300003323 Bacteria 1738
11 JGI25160J50197_1000062 3300003354 Bacteria 116417
12 Ga0055532_1000290 3300003758 Bacteria 31802
13 Ga0055535_1000559 3300003761 Bacteria 31802
14 Ga0055542_1000579 3300003762 Bacteria 31802
15 Ga0055529_1000550 3300003763 Bacteria 31802
16 Ga0055526_1048619 3300003771 Bacteria 986
17 Ga0055537_1014404 3300003773 Bacteria 1437
18 Ga0055537_1017519 3300003773 Bacteria 1175
19 Ga0055524_1000003 3300003775 Bacteria 399748
20 Ga0055524_1000861 3300003775 Bacteria 19849
21 Ga0055528_1003552 3300003790 Bacteria 7779
22 Ga0055530_10000262 3300003791 Bacteria 47466
23 Ga0065165_1000308 3300005262 Bacteria 80273
24 Ga0068855_100041389 3300005563 Bacteria 5461
25 Ga0099826_10000002 3300006948 Bacteria 1125830
26 Ga0105251_10003007 3300009011 Bacteria 12579
27 Ga0163162_10001400 3300013306 Bacteria 22443
28 Ga0182007_10000344 3300015262 Bacteria 29578
29 Ga0182007_10005688 3300015262 Bacteria 5436
30 Ga0183361_10007 3300016635 Bacteria 339575
31 Ga0209672_100044 3300025228 Bacteria 270292
32 Ga0209147_100039 3300025229 Bacteria 311101
33 Ga0209258_100062 3300025242 Bacteria 311101
34 Ga0207425_1000478 3300025245 Bacteria 25429
35 Ga0209148_1000075 3300025254 Bacteria 311101
36 Ga0209565_1001338 3300025263 Bacteria 11213
37 Ga0209565_1005458 3300025263 Bacteria 3694
38 Ga0209565_1025789 3300025263 Bacteria 1185
39 Ga0209455_1000067 3300025272 Bacteria 311101
40 Ga0209673_1000044 3300025273 Bacteria 290647
41 Ga0209130_1019146 3300025284 Bacteria 1594
42 Ga0209025_1002042 3300025294 Bacteria 23019
43 Ga0209564_1000109 3300025295 Bacteria 212912
44 Ga0209564_1004832 3300025295 Bacteria 8021
45 Ga0209564_1009143 3300025295 Bacteria 4765
46 Ga0209564_1020436 3300025295 Bacteria 2424
47 Ga0209758_1000213 3300025297 Bacteria 126745
48 Ga0209758_1000745 3300025297 Bacteria 47375
49 Ga0209050_1000074 3300025298 Bacteria 289334
50 Ga0209256_1000007 3300025299 Bacteria 1136599
51 Ga0209256_1001600 3300025299 Bacteria 22175
52 Ga0207426_1000004 3300025302 Bacteria 1047900
53 Ga0207713_1000252 3300025735 Bacteria 67447
54 Ga0207647_10088441 3300025904 Bacteria 1850
55 Ga0207695_10000457 3300025913 Bacteria 88990
56 Ga0207695_10004091 3300025913 Bacteria 20044
57 Ga0207665_10182269 3300025939 Bacteria 1521
58 Ga0207667_10029547 3300025949 Bacteria 5943
59 Ga0207698_10002874 3300026142 Bacteria 10300
60 Ga0209371_1001316 3300027312 Bacteria 17373
61 Ga0209282_1000001 3300027666 Bacteria 2450367
62 Ga0307515_10003606 3300028794 Bacteria 32510
63 Ga0307515_10010406 3300028794 Bacteria 17822
64 Ga0268256_1000811 3300030500 Bacteria 22366
65 Ga0265331_10000850 3300031250 Bacteria 24826
66 Ga0265327_10001272 3300031251 Bacteria 33201
67 Ga0307513_10075721 3300031456 Bacteria 3493
68 Ga0307513_10155328 3300031456 Bacteria 2189
69 Ga0307509_10080294 3300031507 Bacteria 3374
70 Ga0307408_100000126 3300031548 Bacteria 84345
71 Ga0307408_100046541 3300031548 Bacteria 3103
72 Ga0307405_10214406 3300031731 Bacteria 1408
73 Ga0395905_0000020 3300037471 Bacteria 337672
74 Ga0451789_1245637 3300041443 Bacteria 1104
75 Ga0466957_0121103 3300044842 Bacteria 1668
76 Ga0495617_000013 3300046452 Bacteria 290031
77 Ga0495617_000556 3300046452 Bacteria 19192
78 Ga0495592_0034055 3300046454 Bacteria 3841
79 Ga0495603_0083164 3300046455 Bacteria 1875
80 Ga0495603_0106963 3300046455 Bacteria 1632
81 Ga0495591_001822 3300046458 Bacteria 12608
82 Ga0495629_0003737 3300046459 Bacteria 11470
83 Ga0495651_0043609 3300046462 Bacteria 3479
84 Ga0495653_0000025 3300046463 Bacteria 160471
85 Ga0495653_0000158 3300046463 Bacteria 56295
86 Ga0495653_0001203 3300046463 Bacteria 20092
87 Ga0495653_0060913 3300046463 Bacteria 2857
88 Ga0495653_0194465 3300046463 Bacteria 1381
89 Ga0495650_0000208 3300046471 Bacteria 127362
90 Ga0495580_0000082 3300046472 Bacteria 61156
91 Ga0495582_0011743 3300046473 Bacteria 4827
92 Ga0495605_0073803 3300046474 Bacteria 1606
93 Ga0495639_0054572 3300046475 Bacteria 1822
94 Ga0495664_0000272 3300046477 Bacteria 24681
95 Ga0495664_0116018 3300046477 Bacteria 1618
96 Ga0495585_0001149 3300046492 Bacteria 21610
97 Ga0495606_0000137 3300046507 Bacteria 124670
98 Ga0495608_0000473 3300046511 Bacteria 27881
99 Ga0495610_0000012 3300046512 Bacteria 517442
100 Ga0495610_0001952 3300046512 Bacteria 17737
101 Ga0495610_0002129 3300046512 Bacteria 16840
102 Ga0495610_0035392 3300046512 Bacteria 2564
103 Ga0495618_0000716 3300046514 Bacteria 23141
104 Ga0495628_0000084 3300046516 Bacteria 73340
105 Ga0495628_0004898 3300046516 Bacteria 11781
106 Ga0495628_0071914 3300046516 Bacteria 2695
107 Ga0495630_0009164 3300046517 Bacteria 7117
108 Ga0495630_0088515 3300046517 Bacteria 2338
109 Ga0495630_0104849 3300046517 Bacteria 2140
110 Ga0495643_0000194 3300046522 Bacteria 96362
111 Ga0495648_0011310 3300046524 Bacteria 6733
112 Ga0495648_0017664 3300046524 Bacteria 5088
113 Ga0495648_0038381 3300046524 Bacteria 3064
114 Ga0495666_0001209 3300046526 Bacteria 12470
115 Ga0495666_0003307 3300046526 Bacteria 8142
116 Ga0495652_0000753 3300046529 Bacteria 37287
117 Ga0495654_0000076 3300046530 Bacteria 113516
118 Ga0495665_0000202 3300046531 Bacteria 30521
119 Ga0495665_0001369 3300046531 Bacteria 13033
120 Ga0495640_0002557 3300046533 Bacteria 14627
121 Ga0495586_0126985 3300046535 Bacteria 1427
122 Ga0495621_0038889 3300046539 Bacteria 1661
123 Ga0495597_0000214 3300046542 Bacteria 52996
124 Ga0495645_0018000 3300046543 Bacteria 5070
125 Ga0495622_0001492 3300046557 Bacteria 11721
126 Ga0495633_0002801 3300046558 Bacteria 12057
127 Ga0495633_0022721 3300046558 Bacteria 3116
128 Ga0495668_0000083 3300046616 Bacteria 153471
129 Ga0495668_0001098 3300046616 Bacteria 28008
130 Ga0495634_0067869 3300046642 Bacteria 2357
131 Ga0495634_0092840 3300046642 Bacteria 1958
132 Ga0495625_0002741 3300046660 Bacteria 18654
133 Ga0495625_0017612 3300046660 Bacteria 5590
134 Ga0495635_0006134 3300046663 Bacteria 8383
135 Ga0495635_0008498 3300046663 Bacteria 7173
136 Ga0495635_0045325 3300046663 Bacteria 3035
137 Ga0495661_0038372 3300046665 Bacteria 2984
138 Ga0495599_0155188 3300046678 Bacteria 1416
139 Ga0495599_0252054 3300046678 Bacteria 1074
140 Ga0495623_0000513 3300046679 Bacteria 25631
141 Ga0495623_0001634 3300046679 Bacteria 15075
142 Ga0495623_0023333 3300046679 Bacteria 3993
143 Ga0495669_0201527 3300046684 Bacteria 951
144 Ga0495624_0000116 3300046690 Bacteria 55828
145 Ga0495624_0000190 3300046690 Bacteria 46541
146 Ga0495624_0000860 3300046690 Bacteria 24093
147 Ga0495624_0007300 3300046690 Bacteria 7765
148 Ga0495624_0025636 3300046690 Bacteria 3870
149 Ga0495671_0000724 3300046692 Bacteria 23825
150 Ga0495671_0035074 3300046692 Bacteria 2549
151 Ga0495671_0039023 3300046692 Bacteria 2399
152 Ga0495649_0004339 3300046694 Bacteria 9295
153 Ga0495589_0002114 3300046794 Bacteria 11215
154 Ga0495600_0027491 3300046809 Bacteria 3675
155 Ga0495581_0019943 3300047315 Bacteria 3893
156 Ga0495604_0001572 3300047317 Bacteria 18799
157 Ga0495604_0002375 3300047317 Bacteria 15092
158 Ga0495604_0008190 3300047317 Bacteria 8269
159 Ga0495604_0092485 3300047317 Bacteria 2240
160 Ga0495604_0125375 3300047317 Bacteria 1852
161 Ga0495674_0000053 3300047319 Bacteria 76346
162 Ga0495674_0000273 3300047319 Bacteria 44151
163 Ga0495674_0002593 3300047319 Bacteria 17597
164 Ga0495674_0083489 3300047319 Bacteria 2738
165 Ga0495672_0000022 3300047320 Bacteria 420632
166 Ga0495672_0000170 3300047320 Bacteria 94669
167 Ga0495676_0010842 3300047321 Bacteria 8243
168 Ga0495680_0002459 3300047322 Bacteria 18960
169 Ga0495680_0007470 3300047322 Bacteria 10016
170 Ga0495680_0021738 3300047322 Bacteria 5365
171 Ga0495680_0030624 3300047322 Bacteria 4392
172 Ga0495683_0001310 3300047323 Bacteria 16705
173 Ga0495683_0005076 3300047323 Bacteria 7364
174 Ga0495687_000069 3300047443 Bacteria 159852
175 Ga0495675_0002685 3300047444 Bacteria 10654
176 Ga0495675_0037174 3300047444 Bacteria 3101
177 Ga0495675_0192755 3300047444 Bacteria 1243
178 Ga0495679_003811 3300047446 Bacteria 7139
179 Ga0495679_003829 3300047446 Bacteria 7121
180 Ga0495673_0000015 3300047469 Bacteria 598766
181 Ga0495673_0000044 3300047469 Bacteria 283033
182 Ga0495686_0000012 3300047472 Bacteria 508428
183 Ga0495686_0002711 3300047472 Bacteria 16211
184 Ga0495686_0049847 3300047472 Bacteria 2633
185 Ga0495593_0000004 3300047673 Bacteria 112755
186 Ga0495593_0004106 3300047673 Bacteria 8658
187 Ga0495593_0060305 3300047673 Bacteria 1986
188 Ga0495602_0000061 3300048088 Bacteria 105566
189 Ga0495602_0002516 3300048088 Bacteria 18676
190 Ga0495602_0004436 3300048088 Bacteria 14655
191 Ga0495614_0001054 3300048089 Bacteria 11781
192 Ga0495614_0008782 3300048089 Bacteria 4487
193 Ga0495615_0060163 3300048090 Bacteria 1000
194 Ga0496100_0105291 3300048903 Bacteria 1950
195 Ga0496101_0000045 3300048904 Bacteria 157340
196 Ga0496101_0095786 3300048904 Bacteria 2214
197 Ga0496102_0000223 3300048905 Bacteria 75090
198 Ga0496102_0018094 3300048905 Bacteria 6186
199 Ga0496103_0000832 3300048906 Bacteria 22663
200 Ga0496104_0020383 3300048907 Bacteria 6078
201 Ga0496105_0129786 3300048908 Bacteria 2078
202 Ga0496107_0296319 3300048910 Bacteria 1204
203 Ga0496108_0041090 3300048911 Bacteria 3859
204 Ga0496110_0111590 3300048913 Bacteria 2458
205 Ga0496111_0079187 3300048914 Bacteria 2397
206 Ga0496116_0009438 3300048919 Bacteria 8310
207 Ga0496116_0110809 3300048919 Bacteria 1614
208 Ga0496117_0000293 3300048920 Bacteria 89946
209 Ga0496117_0003637 3300048920 Bacteria 17753
210 Ga0496117_0075124 3300048920 Bacteria 2247
211 Ga0496117_0122374 3300048920 Bacteria 1596
212 Ga0496118_0000302 3300048921 Bacteria 85602
213 Ga0496118_0000671 3300048921 Bacteria 55606
214 Ga0496118_0001076 3300048921 Bacteria 42618
215 Ga0496118_0106008 3300048921 Bacteria 1882
216 Ga0496119_0077949 3300048922 Bacteria 1918
217 Ga0496120_0076819 3300048923 Bacteria 1819
218 Ga0496121_0001083 3300048924 Bacteria 48097
219 Ga0496121_0033353 3300048924 Bacteria 4660
220 Ga0496121_0054552 3300048924 Bacteria 3338
221 Ga0496121_0072604 3300048924 Bacteria 2762
222 Ga0496122_0001689 3300048925 Bacteria 34233
223 Ga0496122_0010720 3300048925 Bacteria 9402
224 Ga0496122_0250174 3300048925 Bacteria 992
225 Ga0496123_0000145 3300048926 Bacteria 144475
226 Ga0496125_0046977 3300048928 Bacteria 3616
227 Ga0496126_0018975 3300048929 Bacteria 6792
228 Ga0496126_0105476 3300048929 Bacteria 2461
229 Ga0496126_0108287 3300048929 Bacteria 2423
230 Ga0495678_000602 3300049459 Bacteria 33862
231 Ga0495678_062472 3300049459 Bacteria 1394
232 Ga0495682_0008252 3300049460 Bacteria 4112
233 Ga0501269_000222 3300049766 Bacteria 16636
234 nmdc:mga0k408_24843_c1 3300050493 Bacteria 3389
235 Ga0500651_0166574 3300053093 Bacteria 1316
236 Ga0500593_000200 3300053117 Bacteria 24380
237 Ga0500618_000044 3300053125 Bacteria 110159
238 Ga0500618_020817 3300053125 Bacteria 1604
239 Ga0500586_000205 3300053145 Bacteria 11512
240 Ga0500586_000206 3300053145 Bacteria 11510

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031456 Ga0307513_10155328 Ga0307513_101553282 255
2 3300047469 Ga0495673_0000015 Ga0495673_0000015_338018_338959 259
3 iso_pu_bacteria 2585428062 2587759044 259
4 3300046475 Ga0495639_0054572 Ga0495639_0054572_693_1517 260
5 3300046539 Ga0495621_0038889 Ga0495621_0038889_527_1351 260
6 3300048090 Ga0495615_0060163 Ga0495615_0060163_148_972 260
7 3300048910 Ga0496107_0296319 Ga0496107_0296319_115_936 260
8 3300048911 Ga0496108_0041090 Ga0496108_0041090_77_898 260
9 3300048913 Ga0496110_0111590 Ga0496110_0111590_1248_2069 260
10 3300048914 Ga0496111_0079187 Ga0496111_0079187_197_1018 260
11 3300053125 Ga0500618_000044 Ga0500618_000044_52787_53749 261
12 3300013306 Ga0163162_10001400 Ga0163162_1000140020 262
13 3300025297 Ga0209758_1000213 Ga0209758_100021329 262
14 3300031250 Ga0265331_10000850 Ga0265331_1000085019 262
15 3300031251 Ga0265327_10001272 Ga0265327_1000127223 262
16 3300047472 Ga0495686_0000012 Ga0495686_0000012_149001_149828 262
17 3300049460 Ga0495682_0008252 Ga0495682_0008252_323_1153 262
18 3300028794 Ga0307515_10003606 Ga0307515_1000360619 263
19 3300028794 Ga0307515_10010406 Ga0307515_1001040616 263
20 3300031456 Ga0307513_10075721 Ga0307513_100757214 263
21 3300031507 Ga0307509_10080294 Ga0307509_100802941 263
22 3300041443 Ga0451789_1245637 Ga0451789_1245637_137_982 263
23 3300046660 Ga0495625_0002741 Ga0495625_0002741_14244_15092 263
24 3300050493 nmdc:mga0k408_24843_c1 nmdc:mga0k408_24843_c1_941_1786 263
25 3300053093 Ga0500651_0166574 Ga0500651_0166574_380_1228 263
26 3300027312 Ga0209371_1001316 Ga0209371_10013163 265
27 3300030500 Ga0268256_1000811 Ga0268256_100081114 265
28 3300053117 Ga0500593_000200 Ga0500593_000200_4402_5244 265
29 iso_pu_bacteria 2842324504 2842327349 266
30 iso_pu_bacteria 2842348783 2842352044 266
31 3300046455 Ga0495603_0083164 Ga0495603_0083164_300_1190 267
32 3300046463 Ga0495653_0001203 Ga0495653_0001203_14001_14891 267
33 3300046514 Ga0495618_0000716 Ga0495618_0000716_20026_20916 267
34 3300046516 Ga0495628_0004898 Ga0495628_0004898_7668_8558 267
35 3300046517 Ga0495630_0009164 Ga0495630_0009164_187_1077 267
36 3300046526 Ga0495666_0003307 Ga0495666_0003307_6068_6958 267
37 3300046531 Ga0495665_0000202 Ga0495665_0000202_23470_24360 267
38 3300046663 Ga0495635_0045325 Ga0495635_0045325_1876_2766 267
39 3300046679 Ga0495623_0001634 Ga0495623_0001634_8246_9136 267
40 3300046690 Ga0495624_0000116 Ga0495624_0000116_40938_41828 267
41 3300047315 Ga0495581_0019943 Ga0495581_0019943_2267_3157 267
42 3300047317 Ga0495604_0002375 Ga0495604_0002375_1593_2483 267
43 3300047319 Ga0495674_0000273 Ga0495674_0000273_15929_16819 267
44 3300047322 Ga0495680_0007470 Ga0495680_0007470_6061_6951 267
45 3300047444 Ga0495675_0192755 Ga0495675_0192755_171_1061 267
46 3300047673 Ga0495593_0004106 Ga0495593_0004106_5838_6728 267
47 3300048088 Ga0495602_0002516 Ga0495602_0002516_2692_3582 267
48 3300048089 Ga0495614_0008782 Ga0495614_0008782_2790_3680 267
49 iso_pu_bacteria 2900634093 2900642592 267
50 3300053125 Ga0500618_020817 Ga0500618_020817_612_1568 268
51 iso_pu_bacteria 2515154122 2515682194 268
52 iso_pu_bacteria 2562617112 2563058206 268
53 iso_pu_bacteria 2711768613 2713480803 268
54 iso_pu_bacteria 2885270888 2885274370 268
55 iso_pu_bacteria 2902682994 2902690831 268
56 iso_pu_bacteria 2919527303 2919534089 268
57 3300003322 rootL2_10267543 rootL2_102675432 269
58 3300048924 Ga0496121_0072604 Ga0496121_0072604_580_1563 269
59 iso_pu_bacteria 2643221554 2643790763 269
60 3300003316 rootH1_10061689 rootH1_100616894 270
61 3300025913 Ga0207695_10000457 Ga0207695_1000045771 270
62 3300031548 Ga0307408_100046541 Ga0307408_1000465412 270
63 3300031731 Ga0307405_10214406 Ga0307405_102144061 270
64 3300046463 Ga0495653_0000158 Ga0495653_0000158_29296_30150 270
65 3300046477 Ga0495664_0000272 Ga0495664_0000272_6820_7674 270
66 3300046516 Ga0495628_0000084 Ga0495628_0000084_60620_61474 270
67 3300046517 Ga0495630_0104849 Ga0495630_0104849_346_1200 270
68 3300046529 Ga0495652_0000753 Ga0495652_0000753_23676_24530 270
69 3300046535 Ga0495586_0126985 Ga0495586_0126985_512_1366 270
70 3300046543 Ga0495645_0018000 Ga0495645_0018000_1869_2723 270
71 3300046663 Ga0495635_0008498 Ga0495635_0008498_6238_7092 270
72 3300046678 Ga0495599_0252054 Ga0495599_0252054_76_930 270
73 3300046679 Ga0495623_0000513 Ga0495623_0000513_4138_4992 270
74 3300046690 Ga0495624_0000190 Ga0495624_0000190_19468_20322 270
75 3300047317 Ga0495604_0001572 Ga0495604_0001572_16625_17479 270
76 3300047319 Ga0495674_0000053 Ga0495674_0000053_24128_24982 270
77 3300047322 Ga0495680_0002459 Ga0495680_0002459_2382_3236 270
78 3300047443 Ga0495687_000069 Ga0495687_000069_107919_108770 270
79 3300047673 Ga0495593_0000004 Ga0495593_0000004_70700_71554 270
80 3300048088 Ga0495602_0000061 Ga0495602_0000061_29504_30358 270
81 3300048929 Ga0496126_0018975 Ga0496126_0018975_5731_6579 270
82 3300048929 Ga0496126_0108287 Ga0496126_0108287_757_1605 270
83 iso_pu_bacteria 2599185239 2599738977 270
84 iso_pu_bacteria 2599185240 2599745226 270
85 iso_pu_bacteria 2599185355 2600206593 270
86 iso_pu_bacteria 2675903129 2676743045 270
87 iso_pu_bacteria 2857357740 2857367028 270
88 iso_pu_bacteria 2870068957 2870076283 270
89 iso_pu_bacteria 2884811622 2884811977 270
90 iso_pu_bacteria 2884836552 2884838918 270
91 iso_pu_bacteria 2884852848 2884855210 270
92 iso_pu_bacteria 2896154374 2896156121 270
93 iso_pu_bacteria 2928170801 2928175979 270
94 iso_pu_bacteria 8020945358 8020949852 270
95 iso_pu_bacteria 8021120328 8021125979 270
96 iso_pu_bacteria 8039098773 8039103840 270
97 3300003316 rootH1_10041360 rootH1_100413603 271
98 3300003320 rootH2_10049823 rootH2_100498235 271
99 3300003322 rootL2_10098931 rootL2_100989316 271
100 3300003354 JGI25160J50197_1000062 JGI25160J50197_10000626 271
101 3300003758 Ga0055532_1000290 Ga0055532_100029015 271
102 3300003761 Ga0055535_1000559 Ga0055535_100055915 271
103 3300003762 Ga0055542_1000579 Ga0055542_100057915 271
104 3300003763 Ga0055529_1000550 Ga0055529_100055015 271
105 3300003771 Ga0055526_1048619 Ga0055526_10486191 271
106 3300003790 Ga0055528_1003552 Ga0055528_10035527 271
107 3300005262 Ga0065165_1000308 Ga0065165_100030876 271
108 3300009011 Ga0105251_10003007 Ga0105251_1000300711 271
109 3300015262 Ga0182007_10000344 Ga0182007_1000034415 271
110 3300015262 Ga0182007_10005688 Ga0182007_100056882 271
111 3300016635 Ga0183361_10007 Ga0183361_10007169 271
112 3300025228 Ga0209672_100044 Ga0209672_100044152 271
113 3300025229 Ga0209147_100039 Ga0209147_100039152 271
114 3300025242 Ga0209258_100062 Ga0209258_100062152 271
115 3300025254 Ga0209148_1000075 Ga0209148_1000075152 271
116 3300025263 Ga0209565_1005458 Ga0209565_10054583 271
117 3300025272 Ga0209455_1000067 Ga0209455_1000067152 271
118 3300025273 Ga0209673_1000044 Ga0209673_1000044255 271
119 3300025284 Ga0209130_1019146 Ga0209130_10191462 271
120 3300025295 Ga0209564_1004832 Ga0209564_10048323 271
121 3300025295 Ga0209564_1009143 Ga0209564_10091434 271
122 3300025302 Ga0207426_1000004 Ga0207426_1000004346 271
123 3300025735 Ga0207713_1000252 Ga0207713_100025259 271
124 3300025904 Ga0207647_10088441 Ga0207647_100884413 271
125 3300037471 Ga0395905_0000020 Ga0395905_0000020_26866_27720 271
126 3300044842 Ga0466957_0121103 Ga0466957_0121103_664_1530 271
127 3300046454 Ga0495592_0034055 Ga0495592_0034055_1390_2253 271
128 3300046455 Ga0495603_0106963 Ga0495603_0106963_197_1060 271
129 3300046458 Ga0495591_001822 Ga0495591_001822_10440_11303 271
130 3300046459 Ga0495629_0003737 Ga0495629_0003737_3544_4407 271
131 3300046462 Ga0495651_0043609 Ga0495651_0043609_332_1195 271
132 3300046463 Ga0495653_0060913 Ga0495653_0060913_1238_2104 271
133 3300046463 Ga0495653_0194465 Ga0495653_0194465_360_1223 271
134 3300046472 Ga0495580_0000082 Ga0495580_0000082_51501_52367 271
135 3300046473 Ga0495582_0011743 Ga0495582_0011743_3074_3937 271
136 3300046474 Ga0495605_0073803 Ga0495605_0073803_206_1072 271
137 3300046477 Ga0495664_0116018 Ga0495664_0116018_621_1484 271
138 3300046511 Ga0495608_0000473 Ga0495608_0000473_2089_2952 271
139 3300046516 Ga0495628_0071914 Ga0495628_0071914_230_1096 271
140 3300046517 Ga0495630_0088515 Ga0495630_0088515_1222_2088 271
141 3300046524 Ga0495648_0017664 Ga0495648_0017664_4119_4982 271
142 3300046526 Ga0495666_0001209 Ga0495666_0001209_11247_12110 271
143 3300046531 Ga0495665_0001369 Ga0495665_0001369_10125_10988 271
144 3300046533 Ga0495640_0002557 Ga0495640_0002557_11771_12634 271
145 3300046557 Ga0495622_0001492 Ga0495622_0001492_8282_9145 271
146 3300046642 Ga0495634_0067869 Ga0495634_0067869_233_1096 271
147 3300046642 Ga0495634_0092840 Ga0495634_0092840_1022_1888 271
148 3300046663 Ga0495635_0006134 Ga0495635_0006134_2126_2989 271
149 3300046665 Ga0495661_0038372 Ga0495661_0038372_24_887 271
150 3300046678 Ga0495599_0155188 Ga0495599_0155188_18_884 271
151 3300046679 Ga0495623_0023333 Ga0495623_0023333_2096_2959 271
152 3300046684 Ga0495669_0201527 Ga0495669_0201527_22_885 271
153 3300046690 Ga0495624_0000860 Ga0495624_0000860_9035_9901 271
154 3300046690 Ga0495624_0007300 Ga0495624_0007300_3333_4196 271
155 3300046690 Ga0495624_0025636 Ga0495624_0025636_2278_3141 271
156 3300046692 Ga0495671_0000724 Ga0495671_0000724_13811_14812 271
157 3300046692 Ga0495671_0039023 Ga0495671_0039023_823_1686 271
158 3300046694 Ga0495649_0004339 Ga0495649_0004339_1149_2030 271
159 3300046794 Ga0495589_0002114 Ga0495589_0002114_2415_3278 271
160 3300046809 Ga0495600_0027491 Ga0495600_0027491_1706_2569 271
161 3300047317 Ga0495604_0008190 Ga0495604_0008190_1168_2031 271
162 3300047317 Ga0495604_0092485 Ga0495604_0092485_134_1000 271
163 3300047317 Ga0495604_0125375 Ga0495604_0125375_629_1492 271
164 3300047319 Ga0495674_0002593 Ga0495674_0002593_11282_12145 271
165 3300047319 Ga0495674_0083489 Ga0495674_0083489_1757_2620 271
166 3300047321 Ga0495676_0010842 Ga0495676_0010842_6385_7248 271
167 3300047322 Ga0495680_0021738 Ga0495680_0021738_3200_4066 271
168 3300047322 Ga0495680_0030624 Ga0495680_0030624_1108_1971 271
169 3300047323 Ga0495683_0001310 Ga0495683_0001310_14875_15738 271
170 3300047444 Ga0495675_0002685 Ga0495675_0002685_9221_10084 271
171 3300047444 Ga0495675_0037174 Ga0495675_0037174_1202_2068 271
172 3300047446 Ga0495679_003829 Ga0495679_003829_3094_3957 271
173 3300047472 Ga0495686_0049847 Ga0495686_0049847_872_1831 271
174 3300047673 Ga0495593_0060305 Ga0495593_0060305_763_1626 271
175 3300048088 Ga0495602_0004436 Ga0495602_0004436_4184_5047 271
176 3300048089 Ga0495614_0001054 Ga0495614_0001054_8988_9851 271
177 3300048903 Ga0496100_0105291 Ga0496100_0105291_457_1323 271
178 3300048904 Ga0496101_0000045 Ga0496101_0000045_78060_78926 271
179 3300048904 Ga0496101_0095786 Ga0496101_0095786_642_1508 271
180 3300048905 Ga0496102_0000223 Ga0496102_0000223_66965_67831 271
181 3300048905 Ga0496102_0018094 Ga0496102_0018094_2252_3115 271
182 3300048906 Ga0496103_0000832 Ga0496103_0000832_14893_15759 271
183 3300048907 Ga0496104_0020383 Ga0496104_0020383_342_1208 271
184 3300048908 Ga0496105_0129786 Ga0496105_0129786_1064_1930 271
185 3300048919 Ga0496116_0110809 Ga0496116_0110809_109_975 271
186 3300048920 Ga0496117_0000293 Ga0496117_0000293_78491_79357 271
187 3300048920 Ga0496117_0003637 Ga0496117_0003637_2089_2952 271
188 3300048920 Ga0496117_0122374 Ga0496117_0122374_353_1243 271
189 3300048921 Ga0496118_0000302 Ga0496118_0000302_6794_7660 271
190 3300048921 Ga0496118_0000671 Ga0496118_0000671_2157_3020 271
191 3300048921 Ga0496118_0001076 Ga0496118_0001076_22598_23488 271
192 3300048922 Ga0496119_0077949 Ga0496119_0077949_109_975 271
193 3300048923 Ga0496120_0076819 Ga0496120_0076819_185_1051 271
194 3300048924 Ga0496121_0001083 Ga0496121_0001083_9359_10225 271
195 3300048924 Ga0496121_0033353 Ga0496121_0033353_580_1446 271
196 3300048925 Ga0496122_0250174 Ga0496122_0250174_18_899 271
197 3300048929 Ga0496126_0105476 Ga0496126_0105476_1137_2003 271
198 3300049766 Ga0501269_000222 Ga0501269_000222_5352_6227 271
199 3300053145 Ga0500586_000206 Ga0500586_000206_1898_2884 271
200 iso_pu_bacteria 2501025501 2501070041 271
201 iso_pu_bacteria 2501025504 2501407573 271
202 iso_pu_bacteria 2510917014 2511097441 271
203 iso_pu_bacteria 2510917015 2511105606 271
204 iso_pu_bacteria 2513237082 2513556748 271
205 iso_pu_bacteria 2513237083 2513564033 271
206 iso_pu_bacteria 2818991450 2819622860 271
207 iso_pu_bacteria 2863421361 2863422919 271
208 iso_pu_bacteria 2904564687 2904566493 271
209 iso_pu_bacteria 2904571731 2904573538 271
210 iso_pu_bacteria 2928108538 2928113373 271
211 iso_pu_bacteria 2928135762 2928140532 271
212 iso_pu_bacteria 2928503688 2928507382 271
213 iso_pu_bacteria 2928536128 2928539622 271
214 iso_pu_bacteria 8003955200 8003960030 271
215 3300046452 Ga0495617_000013 Ga0495617_000013_85658_86626 272
216 3300046660 Ga0495625_0017612 Ga0495625_0017612_4077_4922 272
217 3300047446 Ga0495679_003811 Ga0495679_003811_1927_2892 272
218 3300047469 Ga0495673_0000044 Ga0495673_0000044_196395_197390 272
219 3300003322 rootL2_10007027 rootL2_100070277 273
220 3300025939 Ga0207665_10182269 Ga0207665_101822692 273
221 3300047320 Ga0495672_0000022 Ga0495672_0000022_137805_138680 273
222 3300005563 Ga0068855_100041389 Ga0068855_1000413896 274
223 3300025949 Ga0207667_10029547 Ga0207667_100295474 274
224 3300046524 Ga0495648_0038381 Ga0495648_0038381_970_2106 274
225 3300047323 Ga0495683_0005076 Ga0495683_0005076_3044_4021 274
226 iso_pu_bacteria 2515154123 2515689092 274
227 iso_pu_bacteria 2519103095 2519462868 274
228 iso_pu_bacteria 2582581311 2585291667 274
229 iso_pu_bacteria 2808606390 2809002892 274
230 iso_pu_bacteria 2808606391 2809010170 274
231 iso_pu_bacteria 2857558681 2857560220 274
232 3300046558 Ga0495633_0002801 Ga0495633_0002801_2730_3644 275
233 3300047472 Ga0495686_0002711 Ga0495686_0002711_5535_6413 275
234 iso_pu_bacteria 2738541357 2739151979 275
235 iso_pu_bacteria 2738543003 2739194000 275
236 iso_pu_bacteria 2738543026 2739320375 275
237 iso_pu_bacteria 2738543029 2739338717 275
238 3300003775 Ga0055524_1000003 Ga0055524_1000003150 276
239 3300006948 Ga0099826_10000002 Ga0099826_10000002597 276
240 3300025295 Ga0209564_1020436 Ga0209564_10204362 276
241 3300025299 Ga0209256_1000007 Ga0209256_1000007214 276
242 3300027666 Ga0209282_1000001 Ga0209282_1000001556 276
243 3300046542 Ga0495597_0000214 Ga0495597_0000214_13626_14576 276
244 3300025913 Ga0207695_10004091 Ga0207695_100040914 277
245 3300026142 Ga0207698_10002874 Ga0207698_100028748 277
246 3300046512 Ga0495610_0001952 Ga0495610_0001952_13681_14661 277
247 3300046512 Ga0495610_0002129 Ga0495610_0002129_9145_10071 277
248 3300046512 Ga0495610_0035392 Ga0495610_0035392_665_1576 277
249 3300046522 Ga0495643_0000194 Ga0495643_0000194_66420_67394 277
250 3300047320 Ga0495672_0000170 Ga0495672_0000170_28881_29855 277
251 3300048919 Ga0496116_0009438 Ga0496116_0009438_4871_5743 277
252 3300048920 Ga0496117_0075124 Ga0496117_0075124_1271_2143 277
253 3300048921 Ga0496118_0106008 Ga0496118_0106008_400_1272 277
254 3300048924 Ga0496121_0054552 Ga0496121_0054552_1433_2305 277
255 3300048925 Ga0496122_0001689 Ga0496122_0001689_18459_19331 277
256 3300048926 Ga0496123_0000145 Ga0496123_0000145_98540_99412 277
257 3300048928 Ga0496125_0046977 Ga0496125_0046977_1114_1986 277
258 3300049459 Ga0495678_000602 Ga0495678_000602_25535_26509 277
259 3300053145 Ga0500586_000205 Ga0500586_000205_693_1604 277
260 3300003323 rootH1_10264875 rootH1_102648752 278
261 3300003773 Ga0055537_1014404 Ga0055537_10144042 278
262 3300003773 Ga0055537_1017519 Ga0055537_10175192 278
263 3300003775 Ga0055524_1000861 Ga0055524_100086116 278
264 3300003791 Ga0055530_10000262 Ga0055530_1000026237 278
265 3300025263 Ga0209565_1001338 Ga0209565_100133812 278
266 3300025263 Ga0209565_1025789 Ga0209565_10257892 278
267 3300025295 Ga0209564_1000109 Ga0209564_1000109161 278
268 3300025298 Ga0209050_1000074 Ga0209050_1000074160 278
269 3300025299 Ga0209256_1001600 Ga0209256_100160010 278
270 3300031548 Ga0307408_100000126 Ga0307408_10000012644 278
271 3300046452 Ga0495617_000556 Ga0495617_000556_2618_3487 278
272 3300046471 Ga0495650_0000208 Ga0495650_0000208_55584_56543 279
273 3300046492 Ga0495585_0001149 Ga0495585_0001149_16182_17147 279
274 3300046512 Ga0495610_0000012 Ga0495610_0000012_13162_14040 279
275 3300046524 Ga0495648_0011310 Ga0495648_0011310_2409_3380 279
276 3300046692 Ga0495671_0035074 Ga0495671_0035074_647_1606 279
277 3300048925 Ga0496122_0010720 Ga0496122_0010720_4186_5151 279
278 3300046463 Ga0495653_0000025 Ga0495653_0000025_65172_66095 280
279 3300046507 Ga0495606_0000137 Ga0495606_0000137_61014_61937 280
280 3300049459 Ga0495678_062472 Ga0495678_062472_378_1301 280
281 iso_pu_bacteria 2857564685 2857566608 280
282 3300003187 JGI25151J46595_10051970 JGI25151J46595_100519701 282
283 3300003215 JGI25153J46596_10038697 JGI25153J46596_100386972 282
284 3300003320 rootH2_10113953 rootH2_101139532 282
285 3300025245 Ga0207425_1000478 Ga0207425_10004786 282
286 3300025294 Ga0209025_1002042 Ga0209025_10020425 282
287 3300025297 Ga0209758_1000745 Ga0209758_100074525 282
288 3300046530 Ga0495654_0000076 Ga0495654_0000076_22539_23492 282
289 3300046558 Ga0495633_0022721 Ga0495633_0022721_1375_2229 282
290 3300046616 Ga0495668_0000083 Ga0495668_0000083_92602_93456 282
291 3300046616 Ga0495668_0001098 Ga0495668_0001098_17002_17865 282

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

151

327

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.7589 90 270
8ja7-assembly1.cif.gz_B cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.6868 93 218
4ymu-assembly1.cif.gz_C crystal structure of an amino acid abc transporter complex with arginines and atps 0.6863 72 273
7ahh-assembly1.cif.gz_B opua inhibited inward-facing, sbd docked 0.672 39 267
4ymu-assembly1.cif.gz_C crystal structure of an amino acid abc transporter complex with arginines and atps 0.6522 72 273
ID Description Score Start End Superfamily
af_P75851_53_247_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8721 80 271 1.10.3720.10
af_P75851_53_247_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8552 80 271 1.10.3720.10
af_Q47539_71_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8495 88 273 1.10.3720.10
af_Q2FVG9_10_202_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8462 90 272 1.10.3720.10
af_Q57856_64_258_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8425 90 272 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A1I6KA35-F1-model_v4 Sulfonate transport system permease protein 0.8915 38 279 GO:0005886
GO:0010438
GO:0055085
AF-A0A370H2H5-F1-model_v4 NitT/TauT family transport system permease protein 0.891 32 278 GO:0005886
GO:0055085
AF-A0A358AAT1-F1-model_v4 ABC transporter permease 0.8859 33 277 GO:0005886
GO:0055085
AF-A0A0S1Y9M4-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.8854 35 280 GO:0005886
GO:0055085
AF-A0A7W0CHI2-F1-model_v4 NitT/TauT family transport system permease protein 0.8851 35 272 GO:0005886
GO:0055085

Feature Viewer

pLDDT pTM Quality
74.42 0.66 Medium
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Predicted Structure (AlphaFold2)

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