F390091

General Info

Members Datasets Scaffolds Average Seq Length
290 190 580 485

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2863404153|2863412457
Length 578
Sequence ARTNSSSSSRSRTDGSARTGTARGDRARSRGAATGDQGAPSRTAGAGSATGGTAPGRGDAVKNTSGRGDTSKSTAGRGGGARTAKNTSGRADTAKGAQGKGGAVKNGSARGGAAKAGRGRRGGGGRTVAAPTGGEFALPVTVTPALPAVETFAELELPAQVLETLRTEGVTEPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLALLARTAGQRAEPRQPLALVLVPTRELAQQVTDALTPYARALRLRLATVVGGMSLGRQASVLRGGAEVVVATPGRLKDLIDRGDCRLDQVAITVLDEADQMADMGFMPQVTALLDQVRPDGQRLLFSATLDRNVDRLVRDYLHDPVVHSVDPSAGAVTTMDHHVLHIEDDDKHATTTEIAARDGRVIMFLDSKHATDRLVKKLLAVGVRAAALHGGKSQSQRNRALSQFKDGDVTALVATNVAARGIHVDDLDLVVNVDPPGDHKDYLHRGGRTARAGESGTVVTLVLPHQRRDVTRLMAVAGITPTTTRVRSGGVELNRITGAQAPSGVPVVLTPPVTQQPAARPSSASRGRRSRPSAQGRRRAPAKGNGR

Samples

Sample ID Description Type Environment
1 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
4 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
5 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
6 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
7 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
8 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
9 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
10 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
11 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
12 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
13 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
14 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
25 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
26 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
27 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
28 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
29 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
30 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
31 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
32 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
33 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
34 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
35 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
36 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
37 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
38 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
39 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
40 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
41 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
42 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
43 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
44 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
45 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
46 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
47 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
48 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
49 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
50 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
53 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
54 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
55 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
56 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
57 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
58 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
59 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
60 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
61 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
62 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
63 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
64 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
65 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
66 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
67 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
68 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
69 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
70 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
71 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
72 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
75 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
76 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
77 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
78 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
79 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
80 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
83 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
84 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
85 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
86 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
87 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
88 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
89 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
90 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
91 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
92 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
93 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
94 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
95 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
96 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
108 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
109 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
110 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
111 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
112 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
113 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
114 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
115 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
116 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
117 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
118 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
119 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
120 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
121 2643221548 Streptomyces sp. Root55 Isolate Unclassified
122 2643221578 Streptomyces sp. Root63 Isolate Unclassified
123 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
124 2643221647 Streptomyces sp. Root369 Isolate Unclassified
125 2643221670 Streptomyces sp. Root431 Isolate Unclassified
126 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
127 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
128 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
129 2643221714 Streptomyces sp. Root264 Isolate Unclassified
130 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
131 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
132 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
133 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
134 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
135 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
136 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
137 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
138 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
139 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
140 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
141 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
142 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
143 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
144 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
145 2862574272 Streptomyces sp. AcE210 Isolate Nodule
146 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
147 2867428634 Streptomyces sp. RP5T Isolate Unclassified
148 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
149 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
150 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
151 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
152 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
153 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
154 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
155 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
156 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
157 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
158 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
159 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
160 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
161 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
162 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
163 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
164 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
165 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
166 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
167 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
168 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
169 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
170 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
171 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
172 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
173 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
174 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
175 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
176 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
177 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
178 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
179 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
180 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
181 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
182 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
183 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
184 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
185 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
186 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
187 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
188 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
189 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
190 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 58.97
Metatranscriptomes 0.69
Isolates 40.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.76
Nodule 1.38
Rhizoplane 0.34
Rhizosphere 77.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24738J21930_10006216 3300002075 Bacteria 2821
2 JGI25153J46596_10015602 3300003215 Bacteria 3085
3 Ga0068854_100001491 3300005578 Bacteria 14172
4 Ga0068852_100001305 3300005616 Bacteria 16681
5 Ga0075367_10012576 3300006178 Bacteria 4521
6 Ga0099826_10060466 3300006948 Bacteria 2468
7 Ga0105251_10001918 3300009011 Bacteria 17025
8 Ga0105241_10006229 3300009174 Bacteria 8795
9 Ga0105239_10051304 3300010375 Bacteria 4522
10 Ga0105246_10000811 3300011119 Bacteria 17787
11 Ga0105246_10063176 3300011119 Bacteria 2582
12 Ga0182008_10015813 3300014497 Bacteria 3930
13 Ga0182007_10004864 3300015262 Bacteria 6001
14 Ga0209758_1009216 3300025297 Bacteria 6195
15 Ga0207713_1026940 3300025735 Bacteria 2620
16 Ga0207647_10002151 3300025904 Bacteria 15059
17 Ga0207647_10009970 3300025904 Bacteria 6729
18 Ga0207647_10039776 3300025904 Bacteria 2964
19 Ga0207654_10011423 3300025911 Bacteria 4532
20 Ga0207695_10005070 3300025913 Bacteria 17658
21 Ga0207671_10000115 3300025914 Bacteria 123555
22 Ga0207664_10213685 3300025929 Bacteria 1670
23 Ga0207709_10005519 3300025935 Bacteria 7177
24 Ga0207667_10058227 3300025949 Bacteria 4054
25 Ga0207639_10109632 3300026041 Bacteria 2247
26 Ga0207698_10029341 3300026142 Bacteria 3938
27 Ga0307517_10024324 3300028786 Bacteria 7472
28 Ga0307515_10003702 3300028794 Bacteria 32085
29 Ga0307515_10123768 3300028794 Bacteria 2906
30 Ga0307511_10047761 3300030521 Bacteria 3496
31 Ga0307512_10015850 3300030522 Bacteria 6975
32 Ga0307513_10041379 3300031456 Bacteria 5086
33 Ga0307509_10001840 3300031507 Bacteria 35075
34 Ga0307508_10034584 3300031616 Bacteria 4555
35 Ga0307508_10164726 3300031616 Bacteria 1820
36 Ga0307409_100200749 3300031995 Bacteria 1784
37 Ga0395898_0002222 3300037466 Bacteria 23640
38 Ga0395898_0058599 3300037466 Bacteria 3748
39 Ga0439436_0002413 3300041404 Bacteria 5607
40 Ga0439436_0003312 3300041404 Bacteria 4884
41 Ga0439439_0002318 3300041406 Bacteria 4024
42 Ga0439433_0001791 3300041999 Bacteria 4466
43 Ga0439449_0002731 3300042007 Bacteria 6867
44 Ga0439457_000555 3300042014 Bacteria 10918
45 Ga0439457_001793 3300042014 Bacteria 6345
46 Ga0450899_000380 3300042135 Bacteria 4928
47 Ga0466965_0011854 3300044683 Bacteria 4092
48 Ga0466966_0001475 3300044684 Bacteria 15132
49 Ga0466966_0008150 3300044684 Bacteria 6943
50 Ga0466961_0000779 3300044693 Bacteria 19969
51 Ga0466961_0002750 3300044693 Bacteria 10941
52 Ga0466961_0016780 3300044693 Bacteria 4708
53 Ga0466963_0002311 3300044694 Bacteria 10611
54 Ga0466964_0010688 3300044706 Bacteria 3464
55 Ga0466971_0003568 3300044719 Bacteria 6650
56 Ga0466970_0001189 3300044765 Bacteria 12643
57 Ga0466970_0039404 3300044765 Bacteria 2507
58 Ga0466957_0002921 3300044842 Bacteria 9257
59 Ga0466960_0003271 3300044901 Bacteria 6209
60 Ga0466959_0026790 3300045049 Bacteria 4275
61 Ga0466959_0131391 3300045049 Bacteria 1774
62 Ga0466958_0002711 3300045836 Bacteria 8973
63 Ga0495592_0026028 3300046454 Bacteria 4438
64 Ga0495592_0054953 3300046454 Bacteria 2947
65 Ga0495603_0019358 3300046455 Bacteria 4120
66 Ga0495603_0056281 3300046455 Bacteria 2329
67 Ga0495590_0036512 3300046457 Bacteria 1714
68 Ga0495629_0000574 3300046459 Bacteria 29816
69 Ga0495629_0005231 3300046459 Bacteria 9704
70 Ga0495629_0018505 3300046459 Bacteria 4985
71 Ga0495629_0036879 3300046459 Bacteria 3448
72 Ga0495629_0049070 3300046459 Bacteria 2959
73 Ga0495629_0082165 3300046459 Bacteria 2248
74 Ga0495629_0086092 3300046459 Bacteria 2192
75 Ga0495651_0010256 3300046462 Bacteria 7194
76 Ga0495651_0059741 3300046462 Bacteria 2922
77 Ga0495651_0076611 3300046462 Bacteria 2533
78 Ga0495653_0026739 3300046463 Bacteria 4624
79 Ga0495639_0024200 3300046475 Bacteria 2672
80 Ga0495662_0000556 3300046476 Bacteria 17125
81 Ga0495664_0003882 3300046477 Bacteria 8156
82 Ga0495664_0045277 3300046477 Bacteria 2609
83 Ga0495585_0070969 3300046492 Bacteria 1899
84 Ga0495594_0000187 3300046499 Bacteria 30127
85 Ga0495594_0085866 3300046499 Bacteria 1760
86 Ga0495596_0019897 3300046500 Bacteria 2752
87 Ga0495608_0001568 3300046511 Bacteria 16329
88 Ga0495620_0025234 3300046515 Bacteria 2815
89 Ga0495628_0038948 3300046516 Bacteria 3803
90 Ga0495630_0043441 3300046517 Bacteria 3358
91 Ga0495643_0034461 3300046522 Bacteria 2793
92 Ga0495652_0013695 3300046529 Bacteria 7296
93 Ga0495640_0010377 3300046533 Bacteria 7204
94 Ga0495640_0011870 3300046533 Bacteria 6681
95 Ga0495640_0012931 3300046533 Bacteria 6361
96 Ga0495587_0001103 3300046536 Bacteria 17737
97 Ga0495645_0051031 3300046543 Bacteria 3010
98 Ga0495645_0062427 3300046543 Bacteria 2698
99 Ga0495633_0020536 3300046558 Bacteria 3320
100 Ga0495667_0111451 3300046559 Bacteria 1768
101 Ga0495634_0001675 3300046642 Bacteria 19329
102 Ga0495634_0007950 3300046642 Bacteria 7911
103 Ga0495611_0030613 3300046648 Bacteria 2367
104 Ga0495625_0017599 3300046660 Bacteria 5593
105 Ga0495625_0022519 3300046660 Bacteria 4830
106 Ga0495625_0025171 3300046660 Bacteria 4516
107 Ga0495635_0011413 3300046663 Bacteria 6231
108 Ga0495635_0035792 3300046663 Bacteria 3442
109 Ga0495588_0015471 3300046674 Bacteria 3672
110 Ga0495657_0002036 3300046675 Bacteria 17217
111 Ga0495657_0004322 3300046675 Bacteria 11349
112 Ga0495657_0015683 3300046675 Bacteria 5538
113 Ga0495657_0030597 3300046675 Bacteria 3768
114 Ga0495599_0012569 3300046678 Bacteria 5221
115 Ga0495646_0027699 3300046680 Bacteria 3553
116 Ga0495613_0004593 3300046689 Bacteria 10362
117 Ga0495613_0042134 3300046689 Bacteria 3379
118 Ga0495613_0062955 3300046689 Bacteria 2714
119 Ga0495613_0105351 3300046689 Bacteria 2035
120 Ga0495624_0010047 3300046690 Bacteria 6531
121 Ga0495624_0046462 3300046690 Bacteria 2760
122 Ga0495671_0003110 3300046692 Bacteria 10310
123 Ga0495589_0041975 3300046794 Bacteria 2280
124 Ga0495581_0009426 3300047315 Bacteria 5648
125 Ga0495604_0000873 3300047317 Bacteria 25153
126 Ga0495604_0000977 3300047317 Bacteria 23846
127 Ga0495604_0003596 3300047317 Bacteria 12355
128 Ga0495604_0043482 3300047317 Bacteria 3516
129 Ga0495674_0126831 3300047319 Bacteria 2152
130 Ga0495676_0001629 3300047321 Bacteria 19525
131 Ga0495676_0001903 3300047321 Bacteria 18327
132 Ga0495676_0005879 3300047321 Bacteria 11261
133 Ga0495676_0031758 3300047321 Bacteria 4462
134 Ga0495676_0035673 3300047321 Bacteria 4158
135 Ga0495676_0036827 3300047321 Bacteria 4080
136 Ga0495676_0108372 3300047321 Bacteria 2043
137 Ga0495680_0046342 3300047322 Bacteria 3428
138 Ga0495687_009977 3300047443 Bacteria 5251
139 Ga0495675_0013873 3300047444 Bacteria 5093
140 Ga0495685_000599 3300047447 Bacteria 11109
141 Ga0495685_001397 3300047447 Bacteria 7390
142 Ga0495685_003350 3300047447 Bacteria 5105
143 Ga0495685_003760 3300047447 Bacteria 4859
144 Ga0495685_010825 3300047447 Bacteria 3065
145 Ga0495685_028535 3300047447 Bacteria 1919
146 Ga0495681_0002193 3300047470 Bacteria 14122
147 Ga0495593_0010593 3300047673 Bacteria 5318
148 Ga0495593_0018196 3300047673 Bacteria 3951
149 Ga0495593_0058728 3300047673 Bacteria 2017
150 Ga0495614_0000254 3300048089 Bacteria 20846
151 Ga0501306_000512 3300049127 Bacteria 3021
152 Ga0501308_000252 3300049128 Bacteria 3131
153 Ga0501031_0053485 3300049568 Bacteria 2631
154 Ga0501033_0011145 3300049570 Bacteria 6887
155 Ga0501033_0042551 3300049570 Bacteria 3386
156 Ga0501034_0010889 3300049571 Bacteria 9447
157 Ga0501039_0017119 3300049575 Bacteria 5559
158 Ga0501039_0083232 3300049575 Bacteria 2492
159 Ga0501046_0087875 3300049580 Bacteria 2394
160 Ga0501047_0000056 3300049581 Bacteria 143501
161 Ga0501047_0004395 3300049581 Bacteria 13266
162 Ga0501080_0046228 3300049742 Bacteria 4054
163 Ga0501035_0024543 3300049822 Bacteria 5528
164 Ga0501035_0050707 3300049822 Bacteria 3718
165 Ga0501035_0100135 3300049822 Bacteria 2544
166 Ga0501044_0061617 3300049823 Bacteria 3837
167 nmdc:mga06z11_11584_c1 3300050494 Bacteria 3808
168 Ga0495619_0110587 3300053085 Bacteria 1877
169 Ga0500560_002230 3300053107 Bacteria 3651
170 Ga0500560_013383 3300053107 Bacteria 2155
171 Ga0500573_0022255 3300053140 Bacteria 3637
172 Ga0500633_0003151 3300053160 Bacteria 3542
173 Ga0466962_0003229 3300061719 Bacteria 7746
174 2863412457 2863404153 Bacteria 9672205
175 2554255790 2554235005 Bacteria 6457341
176 2554255802 2554235005 Bacteria 6457341
177 2585300497 2582581312 Bacteria 7308206
178 2585305554 2582581313 Bacteria 10042643
179 2585305563 2582581313 Bacteria 10042643
180 2585317559 2582581314 Bacteria 11452267
181 2586059381 2585427649 Bacteria 9053857
182 2616701411 2616644814 Bacteria 11555299
183 2616904415 2616644941 Bacteria 8510691
184 2643760111 2643221548 Bacteria 8053412
185 2643899789 2643221578 Bacteria 9213798
186 2643900359 2643221578 Bacteria 9213798
187 2643902843 2643221578 Bacteria 9213798
188 2644175492 2643221631 Bacteria 8168043
189 2644178962 2643221631 Bacteria 8168043
190 2644263048 2643221647 Bacteria 10741251
191 2644390430 2643221670 Bacteria 6497041
192 2644402121 2643221673 Bacteria 9196637
193 2644404647 2643221673 Bacteria 9196637
194 2644405417 2643221673 Bacteria 9196637
195 2644442865 2643221678 Bacteria 9540101
196 2644460192 2643221682 Bacteria 6743283
197 2644631722 2643221714 Bacteria 9015452
198 2768645982 2767802112 Bacteria 6465194
199 2784591604 2784132148 Bacteria 8627943
200 2785342535 2784746763 Bacteria 9783172
201 2785347019 2784746763 Bacteria 9783172
202 2785370221 2784746768 Bacteria 10036182
203 2785370307 2784746768 Bacteria 10036182
204 2808842697 2808606359 Bacteria 9866990
205 2808842718 2808606359 Bacteria 9866990
206 2808916459 2808606375 Bacteria 9466072
207 2808921181 2808606375 Bacteria 9466072
208 2812354989 2811994879 Bacteria 9313447
209 2812357406 2811994879 Bacteria 9313447
210 2812477722 2811994917 Bacteria 7761064
211 2819698469 2818991463 Bacteria 7948711
212 2852637482 2852635781 Bacteria 8251373
213 2852637520 2852635781 Bacteria 8251373
214 2862182477 2862178590 Bacteria 8583590
215 2862185586 2862178590 Bacteria 8583590
216 2862286350 2862281513 Bacteria 9621493
217 2862295072 2862290372 Bacteria 7471434
218 2862390826 2862382967 Bacteria 10317375
219 2862509414 2862507626 Bacteria 9425308
220 2862511825 2862507626 Bacteria 9425308
221 2862516088 2862507626 Bacteria 9425308
222 2862576569 2862574272 Bacteria 10567477
223 2862707456 2862705112 Bacteria 6563286
224 2867431968 2867428634 Bacteria 9590268
225 2912718997 2912715099 Bacteria 9460473
226 2912724131 2912723979 Bacteria 8557534
227 2912758257 2912757875 Bacteria 7940295
228 2912761045 2912757875 Bacteria 7940295
229 2918504862 2918501144 Bacteria 8668083
230 2919474701 2919468124 Bacteria 9133025
231 2919474877 2919468124 Bacteria 9133025
232 2946048656 2946045630 Bacteria 8527308
233 2946049301 2946045630 Bacteria 8527308
234 2946068455 2946064051 Bacteria 8957905
235 2946068487 2946064051 Bacteria 8957905
236 2946070911 2946064051 Bacteria 8957905
237 2946072507 2946072368 Bacteria 8999607
238 2946073531 2946072368 Bacteria 8999607
239 2946076525 2946072368 Bacteria 8999607
240 2946076538 2946072368 Bacteria 8999607
241 2947228450 2947224130 Bacteria 9938529
242 2954385554 2954380949 Bacteria 10050426
243 2954385564 2954380949 Bacteria 10050426
244 2954385949 2954380949 Bacteria 10050426
245 2954677582 2954673503 Bacteria 9685905
246 2954686565 2954682443 Bacteria 9862841
247 2954686571 2954682443 Bacteria 9862841
248 2954696181 2954691527 Bacteria 10720516
249 2954696190 2954691527 Bacteria 10720516
250 2954696600 2954691527 Bacteria 10720516
251 2954711357 2954701450 Bacteria 10834262
252 2954711364 2954701450 Bacteria 10834262
253 2954715570 2954711539 Bacteria 10867210
254 2954715577 2954711539 Bacteria 10867210
255 2954725507 2954721474 Bacteria 10456478
256 2954725514 2954721474 Bacteria 10456478
257 2954736299 2954731030 Bacteria 10243860
258 2954736306 2954731030 Bacteria 10243860
259 2954744444 2954740390 Bacteria 10229294
260 2954744451 2954740390 Bacteria 10229294
261 2954755146 2954749733 Bacteria 10366972
262 2954755153 2954749733 Bacteria 10366972
263 2954763429 2954759201 Bacteria 9358192
264 2954763436 2954759201 Bacteria 9358192
265 2990066326 2990059506 Bacteria 9321252
266 2995464121 2995463766 Bacteria 8577691
267 3006327014 3006321560 Bacteria 8247479
268 3006399965 3006393351 Bacteria 6615579
269 3006426279 3006425503 Bacteria 6491253
270 3006488714 3006486233 Bacteria 8157040
271 3006493271 3006486233 Bacteria 8157040
272 3006495034 3006493962 Bacteria 8825450
273 8008488536 8008485437 Bacteria 7198341
274 8008565817 8008558824 Bacteria 10610750
275 8008578333 8008574985 Bacteria 7815457
276 8023626924 8023623736 Bacteria 8593882
277 8023628374 8023623736 Bacteria 8593882
278 8023629709 8023623736 Bacteria 8593882
279 8025417937 8025413630 Bacteria 7014048
280 8025525067 8025524527 Bacteria 7197316
281 8047896446 8047893842 Bacteria 11723082
282 8048132307 8048127548 Bacteria 11053136
283 8048362489 8048356638 Bacteria 11044339
284 8048373455 8048369669 Bacteria 11666822
285 8048384787 8048379754 Bacteria 11877923
286 8048414300 8048406513 Bacteria 8936924
287 8056064545 8056060235 Bacteria 7259403
288 8056449497 8056447290 Bacteria 7680491
289 8056667217 8056667051 Bacteria 6953971
290 8056837861 8056829672 Bacteria 9045328
291 JGI24738J21930_10006216
292 JGI25153J46596_10015602
293 Ga0068854_100001491
294 Ga0068852_100001305
295 Ga0075367_10012576
296 Ga0099826_10060466
297 Ga0105251_10001918
298 Ga0105241_10006229
299 Ga0105239_10051304
300 Ga0105246_10000811
301 Ga0105246_10063176
302 Ga0182008_10015813
303 Ga0182007_10004864
304 Ga0209758_1009216
305 Ga0207713_1026940
306 Ga0207647_10002151
307 Ga0207647_10009970
308 Ga0207647_10039776
309 Ga0207654_10011423
310 Ga0207695_10005070
311 Ga0207671_10000115
312 Ga0207664_10213685
313 Ga0207709_10005519
314 Ga0207667_10058227
315 Ga0207639_10109632
316 Ga0207698_10029341
317 Ga0307517_10024324
318 Ga0307515_10003702
319 Ga0307515_10123768
320 Ga0307511_10047761
321 Ga0307512_10015850
322 Ga0307513_10041379
323 Ga0307509_10001840
324 Ga0307508_10034584
325 Ga0307508_10164726
326 Ga0307409_100200749
327 Ga0395898_0002222
328 Ga0395898_0058599
329 Ga0439436_0002413
330 Ga0439436_0003312
331 Ga0439439_0002318
332 Ga0439433_0001791
333 Ga0439449_0002731
334 Ga0439457_000555
335 Ga0439457_001793
336 Ga0450899_000380
337 Ga0466965_0011854
338 Ga0466966_0001475
339 Ga0466966_0008150
340 Ga0466961_0000779
341 Ga0466961_0002750
342 Ga0466961_0016780
343 Ga0466963_0002311
344 Ga0466964_0010688
345 Ga0466971_0003568
346 Ga0466970_0001189
347 Ga0466970_0039404
348 Ga0466957_0002921
349 Ga0466960_0003271
350 Ga0466959_0026790
351 Ga0466959_0131391
352 Ga0466958_0002711
353 Ga0495592_0026028
354 Ga0495592_0054953
355 Ga0495603_0019358
356 Ga0495603_0056281
357 Ga0495590_0036512
358 Ga0495629_0000574
359 Ga0495629_0005231
360 Ga0495629_0018505
361 Ga0495629_0036879
362 Ga0495629_0049070
363 Ga0495629_0082165
364 Ga0495629_0086092
365 Ga0495651_0010256
366 Ga0495651_0059741
367 Ga0495651_0076611
368 Ga0495653_0026739
369 Ga0495639_0024200
370 Ga0495662_0000556
371 Ga0495664_0003882
372 Ga0495664_0045277
373 Ga0495585_0070969
374 Ga0495594_0000187
375 Ga0495594_0085866
376 Ga0495596_0019897
377 Ga0495608_0001568
378 Ga0495620_0025234
379 Ga0495628_0038948
380 Ga0495630_0043441
381 Ga0495643_0034461
382 Ga0495652_0013695
383 Ga0495640_0010377
384 Ga0495640_0011870
385 Ga0495640_0012931
386 Ga0495587_0001103
387 Ga0495645_0051031
388 Ga0495645_0062427
389 Ga0495633_0020536
390 Ga0495667_0111451
391 Ga0495634_0001675
392 Ga0495634_0007950
393 Ga0495611_0030613
394 Ga0495625_0017599
395 Ga0495625_0022519
396 Ga0495625_0025171
397 Ga0495635_0011413
398 Ga0495635_0035792
399 Ga0495588_0015471
400 Ga0495657_0002036
401 Ga0495657_0004322
402 Ga0495657_0015683
403 Ga0495657_0030597
404 Ga0495599_0012569
405 Ga0495646_0027699
406 Ga0495613_0004593
407 Ga0495613_0042134
408 Ga0495613_0062955
409 Ga0495613_0105351
410 Ga0495624_0010047
411 Ga0495624_0046462
412 Ga0495671_0003110
413 Ga0495589_0041975
414 Ga0495581_0009426
415 Ga0495604_0000873
416 Ga0495604_0000977
417 Ga0495604_0003596
418 Ga0495604_0043482
419 Ga0495674_0126831
420 Ga0495676_0001629
421 Ga0495676_0001903
422 Ga0495676_0005879
423 Ga0495676_0031758
424 Ga0495676_0035673
425 Ga0495676_0036827
426 Ga0495676_0108372
427 Ga0495680_0046342
428 Ga0495687_009977
429 Ga0495675_0013873
430 Ga0495685_000599
431 Ga0495685_001397
432 Ga0495685_003350
433 Ga0495685_003760
434 Ga0495685_010825
435 Ga0495685_028535
436 Ga0495681_0002193
437 Ga0495593_0010593
438 Ga0495593_0018196
439 Ga0495593_0058728
440 Ga0495614_0000254
441 Ga0501306_000512
442 Ga0501308_000252
443 Ga0501031_0053485
444 Ga0501033_0011145
445 Ga0501033_0042551
446 Ga0501034_0010889
447 Ga0501039_0017119
448 Ga0501039_0083232
449 Ga0501046_0087875
450 Ga0501047_0000056
451 Ga0501047_0004395
452 Ga0501080_0046228
453 Ga0501035_0024543
454 Ga0501035_0050707
455 Ga0501035_0100135
456 Ga0501044_0061617
457 nmdc:mga06z11_11584_c1
458 Ga0495619_0110587
459 Ga0500560_002230
460 Ga0500560_013383
461 Ga0500573_0022255
462 Ga0500633_0003151
463 Ga0466962_0003229
464 2863412457
465 2554255790
466 2554255802
467 2585300497
468 2585305554
469 2585305563
470 2585317559
471 2586059381
472 2616701411
473 2616904415
474 2643760111
475 2643899789
476 2643900359
477 2643902843
478 2644175492
479 2644178962
480 2644263048
481 2644390430
482 2644402121
483 2644404647
484 2644405417
485 2644442865
486 2644460192
487 2644631722
488 2768645982
489 2784591604
490 2785342535
491 2785347019
492 2785370221
493 2785370307
494 2808842697
495 2808842718
496 2808916459
497 2808921181
498 2812354989
499 2812357406
500 2812477722
501 2819698469
502 2852637482
503 2852637520
504 2862182477
505 2862185586
506 2862286350
507 2862295072
508 2862390826
509 2862509414
510 2862511825
511 2862516088
512 2862576569
513 2862707456
514 2867431968
515 2912718997
516 2912724131
517 2912758257
518 2912761045
519 2918504862
520 2919474701
521 2919474877
522 2946048656
523 2946049301
524 2946068455
525 2946068487
526 2946070911
527 2946072507
528 2946073531
529 2946076525
530 2946076538
531 2947228450
532 2954385554
533 2954385564
534 2954385949
535 2954677582
536 2954686565
537 2954686571
538 2954696181
539 2954696190
540 2954696600
541 2954711357
542 2954711364
543 2954715570
544 2954715577
545 2954725507
546 2954725514
547 2954736299
548 2954736306
549 2954744444
550 2954744451
551 2954755146
552 2954755153
553 2954763429
554 2954763436
555 2990066326
556 2995464121
557 3006327014
558 3006399965
559 3006426279
560 3006488714
561 3006493271
562 3006495034
563 8008488536
564 8008565817
565 8008578333
566 8023626924
567 8023628374
568 8023629709
569 8025417937
570 8025525067
571 8047896446
572 8048132307
573 8048362489
574 8048373455
575 8048384787
576 8048414300
577 8056064545
578 8056449497
579 8056667217
580 8056837861

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00270

DEAD

DEAD/DEAH box helicase

174

343

0.95

PF00271

Helicase_C

Helicase conserved C-terminal domain

377

484

0.91

PF04851

ResIII

Type III restriction enzyme, res subunit

185

338

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kbg-assembly1.cif.gz_A almost closed conformation of the helicase core of the rna helicase hera 0.966 55 259
3nbf-assembly2.cif.gz_D q28e mutant of hera helicase n-terminal domain bound to 8-oxo-adp 0.961 55 259
4a4d-assembly1.cif.gz_A crystal structure of the n-terminal domain of the human dead-box rna helicase ddx5 (p68) 0.959 52 256
3fe2-assembly2.cif.gz_B human dead-box rna helicase ddx5 (p68), conserved domain i in complex with adp 0.957 44 256
3nbf-assembly1.cif.gz_A q28e mutant of hera helicase n-terminal domain bound to 8-oxo-adp 0.9525 55 259
ID Description Score Start End Superfamily
af_I1LLY6_80_331_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9761 46 259 3.40.50.300
af_A0A1D6MHG8_113_357_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9725 63 258 3.40.50.300
2z0mA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.967 64 259 3.40.50.300
af_P0A8J8_2_217_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9651 54 254 3.40.50.300
af_A0A0P0XCD9_496_590_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.963 293 349 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A831LMB2-F1-model_v4 ATP-dependent helicase 0.9463 318 414 GO:0003724
GO:0005524
GO:0005829
AF-A0A442QSW7-F1-model_v4 deleted 0.9383 60 419
AF-A0A6G1E3H7-F1-model_v4 Helicase C-terminal domain-containing protein 0.9373 276 376 GO:0003723
GO:0004386
GO:0005634
GO:0016787
AF-A0A3C0PMI4-F1-model_v4 ATP-dependent RNA helicase 0.9371 61 429 GO:0003676
GO:0003724
GO:0005524
GO:0005829
GO:0016787
AF-A0A1W9L7W2-F1-model_v4 DEAD/DEAH box helicase 0.9348 53 417 GO:0003676
GO:0003724
GO:0005524
GO:0005829
GO:0016787

Map