F389757

General Info

Members Datasets Scaffolds Average Seq Length
290 150 576 202

Family's Representative Sequence

Representative Sequence 3300009553|Ga0105249_10134715|Ga0105249_101347154
Length 240
Sequence VIGTTNSYASLHSHERNADYLNSVEQTRLRSKNHSPINGMIDKALLLLRDELESYINSKDASVNVVIDNVGLFETSKGDTLTNNVIITLVNIEEESTLKNQPALKRPFAGNAIYQNPPVFLNLYILFTCNYSGNDYPLALRRLSFIIQFLQSKNSFSTASSISGGSLDLTEAGITGLKFTLELYTLTFEQINHLWGSLGGRQMPFAMYKLRLVAITENAVVREVPLIEEIDTTIKPVTAN

Samples

Sample ID Description Type Environment
1 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
20 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
21 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
117 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
127 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
134 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
137 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
138 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
139 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
145 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
146 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
149 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
150 2904467357 Chitinophaga sancti 3198 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.62
Metatranscriptomes 0.34
Isolates 1.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.69
Nodule 0.34
Rhizoplane 0.34
Rhizosphere 94.14
Stem 0
Stem Tuber 0
Unclassified 10.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105249_10134715 3300009553 Unclassified 2362
2 rootH1_10040135 3300003316 Unclassified 3121
3 rootH1_10058260 3300003316 Bacteria 8164
4 rootH2_10053835 3300003320 Bacteria 6049
5 rootH2_10245984 3300003320 Bacteria 2207
6 rootL2_10143967 3300003322 Unclassified 4529
7 rootH1_10099817 3300003323 Bacteria 5083
8 Ga0058862_10004264 3300004803 Bacteria 3968
9 Ga0065165_1000594 3300005262 Bacteria 53096
10 Ga0065714_10002260 3300005288 Bacteria 39051
11 Ga0065714_10210330 3300005288 Bacteria 868
12 Ga0070658_10013929 3300005327 Bacteria 6456
13 Ga0070658_10045298 3300005327 Bacteria 3557
14 Ga0070658_10583469 3300005327 Bacteria 968
15 Ga0070676_10003014 3300005328 Bacteria 8706
16 Ga0070683_100001500 3300005329 Bacteria 18016
17 Ga0070683_100003382 3300005329 Bacteria 12927
18 Ga0070683_100184783 3300005329 Bacteria 1979
19 Ga0070670_100216442 3300005331 Bacteria 1666
20 Ga0068869_100584120 3300005334 Bacteria 942
21 Ga0070666_10028742 3300005335 Bacteria 3651
22 Ga0070680_100001180 3300005336 Bacteria 18795
23 Ga0070680_100161277 3300005336 Bacteria 1884
24 Ga0070682_100001186 3300005337 Bacteria 14856
25 Ga0070682_100032157 3300005337 Unclassified 3179
26 Ga0068868_100009915 3300005338 Bacteria 6880
27 Ga0068868_100431808 3300005338 Bacteria 1142
28 Ga0070660_100004519 3300005339 Bacteria 9619
29 Ga0070691_10038143 3300005341 Unclassified 2268
30 Ga0070661_100000875 3300005344 Bacteria 21632
31 Ga0070692_10613016 3300005345 Bacteria 722
32 Ga0070668_100008310 3300005347 Bacteria 7704
33 Ga0070671_100112802 3300005355 Bacteria 2284
34 Ga0070673_100001091 3300005364 Bacteria 15525
35 Ga0070688_100585305 3300005365 Bacteria 852
36 Ga0070659_100007152 3300005366 Bacteria 8097
37 Ga0070659_100016881 3300005366 Bacteria 5486
38 Ga0070667_100002004 3300005367 Bacteria 18046
39 Ga0070663_100011382 3300005455 Bacteria 5582
40 Ga0070678_100278842 3300005456 Bacteria 1413
41 Ga0070662_100007553 3300005457 Bacteria 7055
42 Ga0070681_10003681 3300005458 Bacteria 14383
43 Ga0070681_10011796 3300005458 Bacteria 8663
44 Ga0070681_10524737 3300005458 Bacteria 1097
45 Ga0068867_100071192 3300005459 Bacteria 2601
46 Ga0068867_100318206 3300005459 Unclassified 1288
47 Ga0070679_100010888 3300005530 Bacteria 8640
48 Ga0070679_100019846 3300005530 Bacteria 6544
49 Ga0070679_100192799 3300005530 Bacteria 2006
50 Ga0070679_100703184 3300005530 Bacteria 953
51 Ga0070684_100000830 3300005535 Bacteria 21658
52 Ga0070684_100073729 3300005535 Bacteria 3008
53 Ga0070684_100391548 3300005535 Bacteria 1281
54 Ga0068853_100001068 3300005539 Bacteria 19353
55 Ga0068853_100002519 3300005539 Bacteria 13747
56 Ga0068853_100021200 3300005539 Bacteria 5413
57 Ga0070693_100004951 3300005547 Bacteria 6358
58 Ga0070665_100009933 3300005548 Bacteria 9627
59 Ga0068855_100000296 3300005563 Bacteria 61841
60 Ga0068855_100011902 3300005563 Bacteria 10519
61 Ga0068855_100013330 3300005563 Bacteria 9917
62 Ga0068855_100020088 3300005563 Bacteria 8021
63 Ga0068855_100194889 3300005563 Bacteria 2283
64 Ga0068855_100228905 3300005563 Bacteria 2082
65 Ga0070664_100000336 3300005564 Bacteria 34164
66 Ga0070664_100261268 3300005564 Bacteria 1558
67 Ga0068857_100001932 3300005577 Bacteria 16699
68 Ga0068854_100041236 3300005578 Unclassified 3261
69 Ga0068854_100161211 3300005578 Bacteria 1737
70 Ga0068854_100436762 3300005578 Unclassified 1090
71 Ga0068856_100025676 3300005614 Bacteria 5745
72 Ga0068856_100054333 3300005614 Bacteria 3950
73 Ga0068856_100447314 3300005614 Unclassified 1313
74 Ga0068852_100061804 3300005616 Bacteria 3256
75 Ga0068852_100104030 3300005616 Bacteria 2569
76 Ga0068864_100006330 3300005618 Bacteria 9709
77 Ga0068864_100220144 3300005618 Bacteria 1751
78 Ga0068866_10344503 3300005718 Bacteria 945
79 Ga0068861_100033876 3300005719 Bacteria 3771
80 Ga0068863_100064765 3300005841 Bacteria 3457
81 Ga0068860_100006546 3300005843 Bacteria 11695
82 Ga0068862_100297707 3300005844 Bacteria 1483
83 Ga0097621_100065924 3300006237 Bacteria 2982
84 Ga0097621_100481886 3300006237 Bacteria 1121
85 Ga0068865_100007780 3300006881 Bacteria 6608
86 Ga0105240_10000063 3300009093 Bacteria 215936
87 Ga0105240_10000071 3300009093 Bacteria 204197
88 Ga0105240_10001256 3300009093 Bacteria 44019
89 Ga0105240_10001558 3300009093 Bacteria 38910
90 Ga0105240_10003150 3300009093 Bacteria 25961
91 Ga0105240_10020814 3300009093 Bacteria 8737
92 Ga0105240_10068851 3300009093 Bacteria 4383
93 Ga0105240_10081035 3300009093 Bacteria 3990
94 Ga0105240_10618006 3300009093 Bacteria 1191
95 Ga0105245_10125991 3300009098 Unclassified 2398
96 Ga0105241_10000832 3300009174 Bacteria 23374
97 Ga0105241_10149596 3300009174 Bacteria 1909
98 Ga0105241_10335271 3300009174 Bacteria 1309
99 Ga0105241_10461375 3300009174 Bacteria 1125
100 Ga0105248_10213576 3300009177 Bacteria 2173
101 Ga0105237_10000922 3300009545 Bacteria 39546
102 Ga0105237_10055762 3300009545 Bacteria 3958
103 Ga0105237_10171457 3300009545 Bacteria 2170
104 Ga0105237_10186378 3300009545 Bacteria 2075
105 Ga0105237_10367891 3300009545 Bacteria 1442
106 Ga0105237_10590278 3300009545 Bacteria 1118
107 Ga0105238_10123343 3300009551 Bacteria 2570
108 Ga0105238_10143846 3300009551 Bacteria 2361
109 Ga0105249_10020781 3300009553 Bacteria 5870
110 Ga0105249_10221007 3300009553 Bacteria 1864
111 Ga0123340_1000005 3300009763 Bacteria 71174
112 Ga0105239_10000236 3300010375 Bacteria 81683
113 Ga0105239_10000642 3300010375 Bacteria 49706
114 Ga0105239_10011593 3300010375 Bacteria 9833
115 Ga0105239_10021431 3300010375 Bacteria 7125
116 Ga0105239_10031210 3300010375 Bacteria 5861
117 Ga0105239_10195969 3300010375 Bacteria 2262
118 Ga0105246_10046223 3300011119 Bacteria 2968
119 Ga0157373_10017948 3300013100 Bacteria 5151
120 Ga0157371_10001693 3300013102 Bacteria 22451
121 Ga0157371_10007943 3300013102 Bacteria 8514
122 Ga0157371_10014292 3300013102 Bacteria 5996
123 Ga0157371_10034420 3300013102 Bacteria 3634
124 Ga0157371_10056981 3300013102 Bacteria 2771
125 Ga0157371_10061774 3300013102 Bacteria 2656
126 Ga0157370_10000290 3300013104 Bacteria 63441
127 Ga0157370_10000440 3300013104 Bacteria 51946
128 Ga0157370_10011385 3300013104 Bacteria 9310
129 Ga0157370_10103247 3300013104 Bacteria 2669
130 Ga0157370_10265344 3300013104 Unclassified 1586
131 Ga0157369_10015441 3300013105 Bacteria 8606
132 Ga0157369_10068146 3300013105 Bacteria 3823
133 Ga0157369_10077694 3300013105 Bacteria 3558
134 Ga0157369_10272126 3300013105 Bacteria 1765
135 Ga0157369_10571312 3300013105 Bacteria 1168
136 Ga0157374_10000009 3300013296 Bacteria 564330
137 Ga0157374_10012464 3300013296 Bacteria 7398
138 Ga0157378_10026129 3300013297 Bacteria 5147
139 Ga0163162_10003248 3300013306 Bacteria 15541
140 Ga0163162_10008975 3300013306 Bacteria 9722
141 Ga0157372_10002771 3300013307 Bacteria 18934
142 Ga0157372_10025460 3300013307 Bacteria 6433
143 Ga0157372_10031420 3300013307 Bacteria 5814
144 Ga0157372_10068499 3300013307 Bacteria 3990
145 Ga0157372_10108164 3300013307 Bacteria 3182
146 Ga0157372_10156431 3300013307 Bacteria 2633
147 Ga0157372_10267340 3300013307 Bacteria 1986
148 Ga0157372_10317809 3300013307 Bacteria 1813
149 Ga0157372_10439316 3300013307 Bacteria 1521
150 Ga0157372_10505857 3300013307 Unclassified 1409
151 Ga0157372_11322674 3300013307 Unclassified 831
152 Ga0157375_10006783 3300013308 Bacteria 9973
153 Ga0157375_10344975 3300013308 Unclassified 1655
154 Ga0157375_10453315 3300013308 Bacteria 1448
155 Ga0163163_10002502 3300014325 Bacteria 15548
156 Ga0163163_10051116 3300014325 Unclassified 4074
157 Ga0157380_10030031 3300014326 Bacteria 4159
158 Ga0157377_10119316 3300014745 Bacteria 1596
159 Ga0157379_10005144 3300014968 Bacteria 11227
160 Ga0157379_10114001 3300014968 Bacteria 2430
161 Ga0157376_10001737 3300014969 Bacteria 14510
162 Ga0182005_1000382 3300015265 Bacteria 24552
163 Ga0163161_10005155 3300017792 Bacteria 9087
164 Ga0163161_10307461 3300017792 Unclassified 1250
165 Ga0207426_1005930 3300025302 Bacteria 5426
166 Ga0207680_10036724 3300025903 Bacteria 2823
167 Ga0207647_10057385 3300025904 Bacteria 2387
168 Ga0207645_10003087 3300025907 Bacteria 12778
169 Ga0207705_10001125 3300025909 Bacteria 21755
170 Ga0207705_10120277 3300025909 Bacteria 1948
171 Ga0207705_10223658 3300025909 Bacteria 1430
172 Ga0207705_10692444 3300025909 Bacteria 792
173 Ga0207705_10732269 3300025909 Bacteria 768
174 Ga0207654_10000480 3300025911 Bacteria 22898
175 Ga0207654_10029802 3300025911 Bacteria 2991
176 Ga0207707_10000026 3300025912 Bacteria 175026
177 Ga0207707_10000067 3300025912 Bacteria 105764
178 Ga0207707_10180810 3300025912 Bacteria 1841
179 Ga0207695_10000068 3300025913 Bacteria 324859
180 Ga0207695_10000133 3300025913 Bacteria 222573
181 Ga0207695_10000514 3300025913 Bacteria 82310
182 Ga0207695_10000996 3300025913 Bacteria 50122
183 Ga0207695_10016209 3300025913 Bacteria 8733
184 Ga0207695_10069034 3300025913 Unclassified 3619
185 Ga0207695_10499006 3300025913 Bacteria 1099
186 Ga0207671_10002015 3300025914 Bacteria 22339
187 Ga0207671_10015148 3300025914 Bacteria 6058
188 Ga0207671_10032507 3300025914 Bacteria 3884
189 Ga0207671_10101779 3300025914 Bacteria 2177
190 Ga0207671_10235161 3300025914 Bacteria 1438
191 Ga0207660_10005994 3300025917 Bacteria 7893
192 Ga0207660_10016017 3300025917 Bacteria 4956
193 Ga0207660_10565140 3300025917 Bacteria 925
194 Ga0207657_10013614 3300025919 Bacteria 7976
195 Ga0207657_10039830 3300025919 Bacteria 4171
196 Ga0207657_10069126 3300025919 Bacteria 2998
197 Ga0207649_10007891 3300025920 Bacteria 5792
198 Ga0207652_10000191 3300025921 Bacteria 64453
199 Ga0207652_10000475 3300025921 Bacteria 41112
200 Ga0207652_10115123 3300025921 Bacteria 2388
201 Ga0207652_10259698 3300025921 Bacteria 1567
202 Ga0207694_10257649 3300025924 Bacteria 1428
203 Ga0207659_10661735 3300025926 Bacteria 893
204 Ga0207690_10003710 3300025932 Bacteria 9080
205 Ga0207690_10018139 3300025932 Bacteria 4313
206 Ga0207704_10028392 3300025938 Unclassified 3103
207 Ga0207691_10000293 3300025940 Bacteria 49545
208 Ga0207661_10000401 3300025944 Bacteria 28045
209 Ga0207661_10004221 3300025944 Bacteria 10056
210 Ga0207661_10259417 3300025944 Unclassified 1548
211 Ga0207661_10279307 3300025944 Bacteria 1492
212 Ga0207679_10000627 3300025945 Bacteria 23551
213 Ga0207667_10000336 3300025949 Bacteria 64428
214 Ga0207667_10002780 3300025949 Bacteria 21662
215 Ga0207667_10013517 3300025949 Bacteria 9333
216 Ga0207667_10125855 3300025949 Bacteria 2640
217 Ga0207667_10159721 3300025949 Bacteria 2319
218 Ga0207667_10374124 3300025949 Unclassified 1452
219 Ga0207667_10774629 3300025949 Unclassified 957
220 Ga0207651_10006933 3300025960 Bacteria 5991
221 Ga0207712_10050302 3300025961 Bacteria 2909
222 Ga0207668_10003890 3300025972 Bacteria 8801
223 Ga0207658_10058358 3300025986 Bacteria 2871
224 Ga0207677_10018081 3300026023 Unclassified 4224
225 Ga0207677_10321730 3300026023 Bacteria 1285
226 Ga0207703_10007280 3300026035 Bacteria 8797
227 Ga0207639_10002708 3300026041 Bacteria 11882
228 Ga0207639_10008126 3300026041 Bacteria 7174
229 Ga0207639_10063926 3300026041 Bacteria 2851
230 Ga0207639_10077308 3300026041 Bacteria 2623
231 Ga0207639_10077435 3300026041 Bacteria 2622
232 Ga0207639_10516992 3300026041 Bacteria 1093
233 Ga0207678_10007815 3300026067 Bacteria 9441
234 Ga0207702_10024805 3300026078 Bacteria 4975
235 Ga0207702_10777590 3300026078 Unclassified 946
236 Ga0207641_10064864 3300026088 Bacteria 3122
237 Ga0207648_10094566 3300026089 Unclassified 2613
238 Ga0207648_10303885 3300026089 Bacteria 1431
239 Ga0207676_10024926 3300026095 Unclassified 4433
240 Ga0207676_10050644 3300026095 Bacteria 3239
241 Ga0207674_10004685 3300026116 Bacteria 16419
242 Ga0207675_100054010 3300026118 Bacteria 3748
243 Ga0207683_10191832 3300026121 Bacteria 1855
244 Ga0207698_10208288 3300026142 Bacteria 1757
245 Ga0207698_10343416 3300026142 Bacteria 1407
246 Ga0268264_10002154 3300028381 Bacteria 17553
247 Ga0268264_10037032 3300028381 Bacteria 4020
248 Ga0307515_10000072 3300028794 Bacteria 237798
249 Ga0265340_10054260 3300031247 Bacteria 1933
250 Ga0307509_10033669 3300031507 Bacteria 5639
251 Ga0307410_10579186 3300031852 Bacteria 934
252 Ga0307414_10001506 3300032004 Bacteria 12098
253 Ga0307414_10003820 3300032004 Bacteria 8097
254 Ga0307510_10003458 3300033180 Bacteria 18411
255 Ga0395899_0011631 3300037312 Bacteria 6734
256 Ga0395900_0041723 3300037418 Bacteria 4729
257 Ga0395900_0043428 3300037418 Bacteria 4633
258 Ga0395898_0012406 3300037466 Bacteria 8810
259 Ga0395898_0091238 3300037466 Bacteria 2931
260 Ga0395905_0042958 3300037471 Bacteria 4241
261 Ga0395901_0121913 3300038443 Bacteria 2740
262 Ga0395901_0296711 3300038443 Bacteria 1676
263 Ga0439448_0039822 3300042005 Bacteria 1516
264 Ga0439446_0104121 3300042156 Unclassified 900
265 Ga0466972_0000187 3300044658 Bacteria 48038
266 Ga0466972_0066763 3300044658 Bacteria 1719
267 Ga0466970_0001123 3300044765 Bacteria 12968
268 Ga0466957_0001210 3300044842 Bacteria 13449
269 Ga0495592_0141798 3300046454 Bacteria 1671
270 Ga0495638_0184198 3300046460 Unclassified 1189
271 Ga0495605_0032669 3300046474 Unclassified 2648
272 Ga0495630_0089964 3300046517 Bacteria 2319
273 Ga0495667_0516836 3300046559 Bacteria 747
274 Ga0495668_0001381 3300046616 Bacteria 23717
275 Ga0495661_0000947 3300046665 Bacteria 26333
276 Ga0495649_0061113 3300046694 Bacteria 2026
277 Ga0495672_0049761 3300047320 Unclassified 2479
278 Ga0495687_077556 3300047443 Bacteria 1312
279 Ga0495686_0395940 3300047472 Unclassified 742
280 Ga0496109_0088381 3300048912 Bacteria 2864
281 Ga0496121_0000468 3300048924 Bacteria 78727
282 Ga0501219_000189 3300049703 Bacteria 11372
283 Ga0501241_021718 3300049758 Bacteria 1184
284 Ga0501284_00007 3300050005 Bacteria 147956
285 nmdc:mga0rr50_225083_c1 3300050513 Bacteria 1550
286 2819572675 2818991442 Bacteria 8318214
287 2821139922 2821136567 Bacteria 8080116
288 2904473874 2904467357 Bacteria 8057758
289 Ga0105249_10134715
290 rootH1_10040135
291 rootH1_10058260
292 rootH2_10053835
293 rootH2_10245984
294 rootL2_10143967
295 rootH1_10099817
296 Ga0058862_10004264
297 Ga0065165_1000594
298 Ga0065714_10002260
299 Ga0065714_10210330
300 Ga0070658_10013929
301 Ga0070658_10045298
302 Ga0070658_10583469
303 Ga0070676_10003014
304 Ga0070683_100001500
305 Ga0070683_100003382
306 Ga0070683_100184783
307 Ga0070670_100216442
308 Ga0068869_100584120
309 Ga0070666_10028742
310 Ga0070680_100001180
311 Ga0070680_100161277
312 Ga0070682_100001186
313 Ga0070682_100032157
314 Ga0068868_100009915
315 Ga0068868_100431808
316 Ga0070660_100004519
317 Ga0070691_10038143
318 Ga0070661_100000875
319 Ga0070692_10613016
320 Ga0070668_100008310
321 Ga0070671_100112802
322 Ga0070673_100001091
323 Ga0070688_100585305
324 Ga0070659_100007152
325 Ga0070659_100016881
326 Ga0070667_100002004
327 Ga0070663_100011382
328 Ga0070678_100278842
329 Ga0070662_100007553
330 Ga0070681_10003681
331 Ga0070681_10011796
332 Ga0070681_10524737
333 Ga0068867_100071192
334 Ga0068867_100318206
335 Ga0070679_100010888
336 Ga0070679_100019846
337 Ga0070679_100192799
338 Ga0070679_100703184
339 Ga0070684_100000830
340 Ga0070684_100073729
341 Ga0070684_100391548
342 Ga0068853_100001068
343 Ga0068853_100002519
344 Ga0068853_100021200
345 Ga0070693_100004951
346 Ga0070665_100009933
347 Ga0068855_100000296
348 Ga0068855_100011902
349 Ga0068855_100013330
350 Ga0068855_100020088
351 Ga0068855_100194889
352 Ga0068855_100228905
353 Ga0070664_100000336
354 Ga0070664_100261268
355 Ga0068857_100001932
356 Ga0068854_100041236
357 Ga0068854_100161211
358 Ga0068854_100436762
359 Ga0068856_100025676
360 Ga0068856_100054333
361 Ga0068856_100447314
362 Ga0068852_100061804
363 Ga0068852_100104030
364 Ga0068864_100006330
365 Ga0068864_100220144
366 Ga0068866_10344503
367 Ga0068861_100033876
368 Ga0068863_100064765
369 Ga0068860_100006546
370 Ga0068862_100297707
371 Ga0097621_100065924
372 Ga0097621_100481886
373 Ga0068865_100007780
374 Ga0105240_10000063
375 Ga0105240_10000071
376 Ga0105240_10001256
377 Ga0105240_10001558
378 Ga0105240_10003150
379 Ga0105240_10020814
380 Ga0105240_10068851
381 Ga0105240_10081035
382 Ga0105240_10618006
383 Ga0105245_10125991
384 Ga0105241_10000832
385 Ga0105241_10149596
386 Ga0105241_10335271
387 Ga0105241_10461375
388 Ga0105248_10213576
389 Ga0105237_10000922
390 Ga0105237_10055762
391 Ga0105237_10171457
392 Ga0105237_10186378
393 Ga0105237_10367891
394 Ga0105237_10590278
395 Ga0105238_10123343
396 Ga0105238_10143846
397 Ga0105249_10020781
398 Ga0105249_10221007
399 Ga0123340_1000005
400 Ga0105239_10000236
401 Ga0105239_10000642
402 Ga0105239_10011593
403 Ga0105239_10021431
404 Ga0105239_10031210
405 Ga0105239_10195969
406 Ga0105246_10046223
407 Ga0157373_10017948
408 Ga0157371_10001693
409 Ga0157371_10007943
410 Ga0157371_10014292
411 Ga0157371_10034420
412 Ga0157371_10056981
413 Ga0157371_10061774
414 Ga0157370_10000290
415 Ga0157370_10000440
416 Ga0157370_10011385
417 Ga0157370_10103247
418 Ga0157370_10265344
419 Ga0157369_10015441
420 Ga0157369_10068146
421 Ga0157369_10077694
422 Ga0157369_10272126
423 Ga0157369_10571312
424 Ga0157374_10000009
425 Ga0157374_10012464
426 Ga0157378_10026129
427 Ga0163162_10003248
428 Ga0163162_10008975
429 Ga0157372_10002771
430 Ga0157372_10025460
431 Ga0157372_10031420
432 Ga0157372_10068499
433 Ga0157372_10108164
434 Ga0157372_10156431
435 Ga0157372_10267340
436 Ga0157372_10317809
437 Ga0157372_10439316
438 Ga0157372_10505857
439 Ga0157372_11322674
440 Ga0157375_10006783
441 Ga0157375_10344975
442 Ga0157375_10453315
443 Ga0163163_10002502
444 Ga0163163_10051116
445 Ga0157380_10030031
446 Ga0157377_10119316
447 Ga0157379_10005144
448 Ga0157379_10114001
449 Ga0157376_10001737
450 Ga0182005_1000382
451 Ga0163161_10005155
452 Ga0163161_10307461
453 Ga0207426_1005930
454 Ga0207680_10036724
455 Ga0207647_10057385
456 Ga0207645_10003087
457 Ga0207705_10001125
458 Ga0207705_10120277
459 Ga0207705_10223658
460 Ga0207705_10692444
461 Ga0207705_10732269
462 Ga0207654_10000480
463 Ga0207654_10029802
464 Ga0207707_10000026
465 Ga0207707_10000067
466 Ga0207707_10180810
467 Ga0207695_10000068
468 Ga0207695_10000133
469 Ga0207695_10000514
470 Ga0207695_10000996
471 Ga0207695_10016209
472 Ga0207695_10069034
473 Ga0207695_10499006
474 Ga0207671_10002015
475 Ga0207671_10015148
476 Ga0207671_10032507
477 Ga0207671_10101779
478 Ga0207671_10235161
479 Ga0207660_10005994
480 Ga0207660_10016017
481 Ga0207660_10565140
482 Ga0207657_10013614
483 Ga0207657_10039830
484 Ga0207657_10069126
485 Ga0207649_10007891
486 Ga0207652_10000191
487 Ga0207652_10000475
488 Ga0207652_10115123
489 Ga0207652_10259698
490 Ga0207694_10257649
491 Ga0207659_10661735
492 Ga0207690_10003710
493 Ga0207690_10018139
494 Ga0207704_10028392
495 Ga0207691_10000293
496 Ga0207661_10000401
497 Ga0207661_10004221
498 Ga0207661_10259417
499 Ga0207661_10279307
500 Ga0207679_10000627
501 Ga0207667_10000336
502 Ga0207667_10002780
503 Ga0207667_10013517
504 Ga0207667_10125855
505 Ga0207667_10159721
506 Ga0207667_10374124
507 Ga0207667_10774629
508 Ga0207651_10006933
509 Ga0207712_10050302
510 Ga0207668_10003890
511 Ga0207658_10058358
512 Ga0207677_10018081
513 Ga0207677_10321730
514 Ga0207703_10007280
515 Ga0207639_10002708
516 Ga0207639_10008126
517 Ga0207639_10063926
518 Ga0207639_10077308
519 Ga0207639_10077435
520 Ga0207639_10516992
521 Ga0207678_10007815
522 Ga0207702_10024805
523 Ga0207702_10777590
524 Ga0207641_10064864
525 Ga0207648_10094566
526 Ga0207648_10303885
527 Ga0207676_10024926
528 Ga0207676_10050644
529 Ga0207674_10004685
530 Ga0207675_100054010
531 Ga0207683_10191832
532 Ga0207698_10208288
533 Ga0207698_10343416
534 Ga0268264_10002154
535 Ga0268264_10037032
536 Ga0307515_10000072
537 Ga0265340_10054260
538 Ga0307509_10033669
539 Ga0307410_10579186
540 Ga0307414_10001506
541 Ga0307414_10003820
542 Ga0307510_10003458
543 Ga0395899_0011631
544 Ga0395900_0041723
545 Ga0395900_0043428
546 Ga0395898_0012406
547 Ga0395898_0091238
548 Ga0395905_0042958
549 Ga0395901_0121913
550 Ga0395901_0296711
551 Ga0439448_0039822
552 Ga0439446_0104121
553 Ga0466972_0000187
554 Ga0466972_0066763
555 Ga0466970_0001123
556 Ga0466957_0001210
557 Ga0495592_0141798
558 Ga0495638_0184198
559 Ga0495605_0032669
560 Ga0495630_0089964
561 Ga0495667_0516836
562 Ga0495668_0001381
563 Ga0495661_0000947
564 Ga0495649_0061113
565 Ga0495672_0049761
566 Ga0495687_077556
567 Ga0495686_0395940
568 Ga0496109_0088381
569 Ga0496121_0000468
570 Ga0501219_000189
571 Ga0501241_021718
572 Ga0501284_00007
573 nmdc:mga0rr50_225083_c1
574 2819572675
575 2821139922
576 2904473874

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14065

Pvc16_N

Pvc16 N-terminal domain

45

229

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7adz-assembly1.cif.gz_0A cryo-em structure of an extracellular contractile injection system in marine bacterium algoriphagus machipongonensis, the cap portion in extended state. 0.8466 1 206
7adz-assembly1.cif.gz_0A cryo-em structure of an extracellular contractile injection system in marine bacterium algoriphagus machipongonensis, the cap portion in extended state. 0.8425 1 206
7b5i-assembly1.cif.gz_AA cryo-em structure of the contractile injection system cap complex from anabaena pcc7120 0.8408 1 202
7b5i-assembly1.cif.gz_AA cryo-em structure of the contractile injection system cap complex from anabaena pcc7120 0.8365 1 202
6j0f-assembly1.cif.gz_A cryo-em structure of an extracellular contractile injection system, pvc sheath/tube terminator in extended state 0.7114 7 207
ID Description Score Start End Superfamily
af_A0A1D6LEA8_2_119_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.5744 44 95 2.60.40.10
af_O50408_1_185_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.5053 7 41 3.40.50.970
af_K7URK6_76_258_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.5013 12 41 3.40.50.2000
af_P9WL07_100_323_3.40.109.10 Alpha Beta;3-Layer(aba) Sandwich;NADH Oxidase;NADH Oxidase 0.4777 83 179 3.40.109.10
af_Q9SUR5_62_211_2.60.40.1820 Mainly Beta;Sandwich;Immunoglobulin-like; 0.4763 48 94 2.60.40.1820
ID Description Score Start End GO Terms
AF-A0A1V9FQM4-F1-model_v4 Pvc16 N-terminal domain-containing protein 0.9527 1 208
AF-A0A1I0S6V6-F1-model_v4 Pvc16 N-terminal domain-containing protein 0.9006 9 207
AF-A0A5N1JAH0-F1-model_v4 DUF4255 domain-containing protein 0.8959 1 208
AF-A0A1I0S6V6-F1-model_v4 Pvc16 N-terminal domain-containing protein 0.8913 9 207
AF-A0A5C6YQK0-F1-model_v4 DUF4255 domain-containing protein 0.8831 1 207

Map