F389639

General Info

Members Datasets Scaffolds Average Seq Length
290 170 290 332

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100000706|Ga0070707_10000070612
Length 374
Sequence MKTKKALITGITGQDGSYLAELLLSLGYEVHGVVRRVALEDPRRRFDRIEHLLDRLTLHAASLESYPSIFHIFSRHEFDECYHLAAQSFVAESFADGFSTMSTNINGTHYMLAALRELQPNCRFYFAGSSEMFGKVREVPQKETTPFHPRSPYGISKVAGFDLTRNYREAYDMFCVSGILFNHESPRRGFEFVTRKITSGVARIYKGLASELRIGNLEARRDWGHARDYVRAMRLMLQQDEPEDLVVATGESHTVREFCELAFAEVGLDYRGYVVQDEAFYRPAEVESLIGDSSKARAKLGWEPQSSFSELVRDMVRRDLSLVGERFEAPVLYADAQAASTPPDQQYEFNDLFPDAFTSSLTLQHSSATGFEVK

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300001426 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 Metagenome Rhizosphere
3 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
4 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
60 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
61 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
67 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
75 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
76 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
77 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
78 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
79 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
80 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
83 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
86 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
87 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
120 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
121 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
122 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
123 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
124 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
125 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
126 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
127 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
128 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
131 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
132 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
133 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
134 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
135 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
136 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
137 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
138 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
139 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
140 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
141 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
144 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
145 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
146 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
151 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
156 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
157 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
158 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
159 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
160 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.34
Nodule 0
Rhizoplane 1.03
Rhizosphere 93.79
Stem 0
Stem Tuber 0
Unclassified 4.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_6058551 2162886011 Unclassified 2942
2 JGI24030J14995_100086 3300001426 Unclassified 2071
3 JGI24748J21848_1000010 3300002074 Bacteria 166979
4 JGI24034J26672_10000001 3300002239 Bacteria 1118280
5 JGI25406J46586_10027223 3300003203 Bacteria 2195
6 Ga0065704_10091612 3300005289 Unclassified 2705
7 Ga0065704_10097275 3300005289 Bacteria 2402
8 Ga0065712_10000114 3300005290 Bacteria 191810
9 Ga0065712_10008868 3300005290 Unclassified 2523
10 Ga0065712_10096778 3300005290 Unclassified 2172
11 Ga0065715_10089539 3300005293 Bacteria 9634
12 Ga0065707_10000594 3300005295 Bacteria 18091
13 Ga0065707_10083075 3300005295 Bacteria 10603
14 Ga0065707_10083441 3300005295 Bacteria 9176
15 Ga0065707_10086887 3300005295 Bacteria 5260
16 Ga0070683_100000027 3300005329 Bacteria 172200
17 Ga0070683_100187176 3300005329 Bacteria 1965
18 Ga0070690_100018147 3300005330 Bacteria 4243
19 Ga0070690_100187253 3300005330 Bacteria 1433
20 Ga0070670_100000025 3300005331 Bacteria 188514
21 Ga0070670_100001617 3300005331 Bacteria 18208
22 Ga0070682_100000073 3300005337 Bacteria 92725
23 Ga0070682_100088897 3300005337 Bacteria 2017
24 Ga0068868_100000159 3300005338 Bacteria 44200
25 Ga0068868_100269446 3300005338 Bacteria 1438
26 Ga0070689_100176932 3300005340 Bacteria 1731
27 Ga0070692_10175721 3300005345 Bacteria 1238
28 Ga0070669_100000544 3300005353 Bacteria 28111
29 Ga0070675_100117715 3300005354 Bacteria 2255
30 Ga0070671_100037571 3300005355 Bacteria 4016
31 Ga0070673_100014619 3300005364 Bacteria 5477
32 Ga0070673_100030653 3300005364 Unclassified 4029
33 Ga0070673_100139941 3300005364 Bacteria 2040
34 Ga0070713_100232249 3300005436 Unclassified 1677
35 Ga0070701_10023286 3300005438 Bacteria 2981
36 Ga0070711_100000028 3300005439 Bacteria 106189
37 Ga0070705_100000017 3300005440 Bacteria 88714
38 Ga0070700_100000068 3300005441 Bacteria 74024
39 Ga0070700_100062016 3300005441 Unclassified 2361
40 Ga0070694_100080147 3300005444 Bacteria 2268
41 Ga0070694_100121487 3300005444 Unclassified 1875
42 Ga0070708_100101012 3300005445 Bacteria 2641
43 Ga0070681_10051766 3300005458 Bacteria 4095
44 Ga0070681_10206794 3300005458 Bacteria 1880
45 Ga0068867_100156687 3300005459 Bacteria 1793
46 Ga0070706_100001479 3300005467 Bacteria 24663
47 Ga0070706_100008144 3300005467 Bacteria 9778
48 Ga0070706_100198801 3300005467 Bacteria 1872
49 Ga0070707_100000706 3300005468 Bacteria 33306
50 Ga0070707_100003707 3300005468 Bacteria 14408
51 Ga0070698_100000562 3300005471 Bacteria 39845
52 Ga0070698_100060234 3300005471 Unclassified 3831
53 Ga0070698_100062708 3300005471 Bacteria 3750
54 Ga0070698_100298876 3300005471 Bacteria 1541
55 Ga0070699_100000047 3300005518 Bacteria 122138
56 Ga0070699_100027030 3300005518 Bacteria 4949
57 Ga0070699_100123814 3300005518 Bacteria 2275
58 Ga0070699_100362954 3300005518 Bacteria 1306
59 Ga0070684_100000293 3300005535 Bacteria 34699
60 Ga0070684_100083409 3300005535 Bacteria 2832
61 Ga0070684_100144378 3300005535 Bacteria 2154
62 Ga0070697_100000250 3300005536 Bacteria 43359
63 Ga0068853_100021972 3300005539 Bacteria 5322
64 Ga0070695_100271357 3300005545 Bacteria 1243
65 Ga0070696_100000054 3300005546 Bacteria 53566
66 Ga0070696_100001508 3300005546 Bacteria 15301
67 Ga0070693_100002195 3300005547 Bacteria 8952
68 Ga0070693_100023362 3300005547 Bacteria 3303
69 Ga0070704_100007193 3300005549 Bacteria 6615
70 Ga0070704_100052133 3300005549 Bacteria 2885
71 Ga0068855_100440592 3300005563 Unclassified 1423
72 Ga0070664_100211257 3300005564 Bacteria 1734
73 Ga0068854_100095662 3300005578 Unclassified 2218
74 Ga0068859_100001573 3300005617 Bacteria 23260
75 Ga0068859_100008758 3300005617 Bacteria 10219
76 Ga0068859_100036516 3300005617 Bacteria 4933
77 Ga0068864_100141572 3300005618 Bacteria 2170
78 Ga0068864_100280611 3300005618 Bacteria 1555
79 Ga0068864_100583784 3300005618 Unclassified 1083
80 Ga0068861_100054078 3300005719 Unclassified 3057
81 Ga0068870_10040363 3300005840 Bacteria 2419
82 Ga0068863_100077928 3300005841 Bacteria 3137
83 Ga0068863_100460968 3300005841 Bacteria 1248
84 Ga0068858_100000005 3300005842 Bacteria 305830
85 Ga0068862_100013567 3300005844 Bacteria 6749
86 Ga0068862_100100641 3300005844 Bacteria 2527
87 Ga0081539_10000235 3300005985 Bacteria 129791
88 Ga0070717_10114056 3300006028 Bacteria 2308
89 Ga0070716_100000017 3300006173 Bacteria 88957
90 Ga0097621_100232909 3300006237 Bacteria 1608
91 Ga0075428_100000336 3300006844 Bacteria 46690
92 Ga0075428_100006359 3300006844 Bacteria 13142
93 Ga0075428_100233839 3300006844 Bacteria 1983
94 Ga0075430_100019957 3300006846 Bacteria 5702
95 Ga0075430_100167988 3300006846 Bacteria 1825
96 Ga0075430_100337425 3300006846 Bacteria 1245
97 Ga0075431_100062202 3300006847 Bacteria 3852
98 Ga0075433_10106119 3300006852 Bacteria 2489
99 Ga0075433_10118318 3300006852 Bacteria 2352
100 Ga0075433_10173426 3300006852 Bacteria 1919
101 Ga0075433_10229969 3300006852 Unclassified 1647
102 Ga0075434_100037076 3300006871 Bacteria 4826
103 Ga0075434_100562194 3300006871 Bacteria 1160
104 Ga0075429_100112560 3300006880 Bacteria 2379
105 Ga0075436_100005870 3300006914 Bacteria 8436
106 Ga0097620_100001573 3300006931 Bacteria 23260
107 Ga0097620_100008758 3300006931 Bacteria 10219
108 Ga0097620_100036516 3300006931 Bacteria 4933
109 Ga0075435_100298257 3300007076 Bacteria 1378
110 Ga0105240_10027458 3300009093 Bacteria 7449
111 Ga0111539_10001205 3300009094 Bacteria 34437
112 Ga0105245_10060466 3300009098 Bacteria 3412
113 Ga0105247_10000002 3300009101 Bacteria 724587
114 Ga0114129_10084513 3300009147 Bacteria 4406
115 Ga0114129_10293411 3300009147 Unclassified 2169
116 Ga0114129_10304242 3300009147 Unclassified 2124
117 Ga0114129_10374506 3300009147 Bacteria 1881
118 Ga0114129_10497969 3300009147 Bacteria 1592
119 Ga0105243_10000431 3300009148 Bacteria 43884
120 Ga0105243_10072451 3300009148 Bacteria 2789
121 Ga0105243_10116214 3300009148 Unclassified 2247
122 Ga0105243_10150423 3300009148 Bacteria 1996
123 Ga0105243_10179291 3300009148 Bacteria 1841
124 Ga0105242_10001443 3300009176 Bacteria 18683
125 Ga0105242_10003247 3300009176 Bacteria 12684
126 Ga0105248_10007359 3300009177 Bacteria 12081
127 Ga0105249_10015448 3300009553 Bacteria 6757
128 Ga0105249_10022797 3300009553 Bacteria 5613
129 Ga0105249_10066502 3300009553 Bacteria 3319
130 Ga0105249_10148162 3300009553 Bacteria 2257
131 Ga0105249_10412268 3300009553 Bacteria 1383
132 Ga0105239_10014565 3300010375 Bacteria 8724
133 Ga0105246_10055992 3300011119 Bacteria 2724
134 Ga0105246_10105791 3300011119 Bacteria 2057
135 Ga0157373_10117693 3300013100 Bacteria 1868
136 Ga0157370_10150363 3300013104 Bacteria 2167
137 Ga0157369_10001392 3300013105 Bacteria 29708
138 Ga0157378_10000003 3300013297 Bacteria 203725
139 Ga0157378_10060353 3300013297 Bacteria 3384
140 Ga0157378_10358143 3300013297 Bacteria 1427
141 Ga0163162_10206199 3300013306 Unclassified 2095
142 Ga0163162_10628586 3300013306 Bacteria 1198
143 Ga0157372_10600352 3300013307 Bacteria 1283
144 Ga0157375_10002301 3300013308 Bacteria 16500
145 Ga0157375_10007147 3300013308 Bacteria 9759
146 Ga0157375_10023921 3300013308 Bacteria 5644
147 Ga0157375_10240125 3300013308 Bacteria 1971
148 Ga0157375_10240165 3300013308 Bacteria 1971
149 Ga0163163_10027509 3300014325 Bacteria 5449
150 Ga0163163_10198267 3300014325 Bacteria 2056
151 Ga0157380_10012602 3300014326 Bacteria 6134
152 Ga0157376_10000018 3300014969 Bacteria 259397
153 Ga0157376_10125040 3300014969 Bacteria 2286
154 Ga0213876_10000006 3300021384 Bacteria 700803
155 Ga0213876_10001475 3300021384 Bacteria 14664
156 Ga0213876_10092562 3300021384 Bacteria 1601
157 Ga0213875_10000144 3300021388 Bacteria 75332
158 Ga0213875_10002320 3300021388 Bacteria 11509
159 Ga0207672_1000036 3300025223 Bacteria 17480
160 Ga0207710_10000002 3300025900 Bacteria 1251998
161 Ga0207710_10006405 3300025900 Bacteria 5029
162 Ga0207699_10000009 3300025906 Bacteria 323355
163 Ga0207699_10138882 3300025906 Bacteria 1595
164 Ga0207643_10050170 3300025908 Bacteria 2366
165 Ga0207643_10244182 3300025908 Bacteria 1105
166 Ga0207684_10003603 3300025910 Bacteria 15075
167 Ga0207684_10031143 3300025910 Bacteria 4540
168 Ga0207684_10046928 3300025910 Bacteria 3664
169 Ga0207707_10170876 3300025912 Bacteria 1900
170 Ga0207671_10035606 3300025914 Unclassified 3693
171 Ga0207663_10000032 3300025916 Bacteria 89306
172 Ga0207646_10000700 3300025922 Bacteria 43479
173 Ga0207646_10002141 3300025922 Bacteria 23606
174 Ga0207646_10004780 3300025922 Bacteria 14543
175 Ga0207646_10250102 3300025922 Bacteria 1601
176 Ga0207681_10003365 3300025923 Bacteria 10011
177 Ga0207681_10116260 3300025923 Bacteria 1954
178 Ga0207650_10000117 3300025925 Bacteria 104348
179 Ga0207650_10002271 3300025925 Bacteria 13420
180 Ga0207650_10197787 3300025925 Bacteria 1609
181 Ga0207644_10019846 3300025931 Bacteria 4563
182 Ga0207686_10010477 3300025934 Bacteria 5050
183 Ga0207686_10084386 3300025934 Bacteria 2081
184 Ga0207686_10098791 3300025934 Bacteria 1944
185 Ga0207709_10001350 3300025935 Bacteria 17259
186 Ga0207709_10107655 3300025935 Bacteria 1857
187 Ga0207709_10125479 3300025935 Bacteria 1740
188 Ga0207665_10000033 3300025939 Bacteria 89014
189 Ga0207711_10008101 3300025941 Bacteria 8797
190 Ga0207711_10055909 3300025941 Bacteria 3389
191 Ga0207689_10005962 3300025942 Bacteria 10782
192 Ga0207661_10000015 3300025944 Bacteria 318960
193 Ga0207667_10370041 3300025949 Unclassified 1461
194 Ga0207651_10020856 3300025960 Unclassified 3966
195 Ga0207651_10046383 3300025960 Bacteria 2922
196 Ga0207712_10005289 3300025961 Bacteria 8152
197 Ga0207712_10025814 3300025961 Bacteria 3908
198 Ga0207712_10082479 3300025961 Unclassified 2344
199 Ga0207712_10116513 3300025961 Bacteria 2013
200 Ga0207677_10000075 3300026023 Bacteria 83195
201 Ga0207677_10077041 3300026023 Unclassified 2376
202 Ga0207703_10000150 3300026035 Bacteria 80047
203 Ga0207703_10196773 3300026035 Bacteria 1789
204 Ga0207639_10011011 3300026041 Bacteria 6270
205 Ga0207708_10000130 3300026075 Bacteria 58987
206 Ga0207641_10063991 3300026088 Bacteria 3143
207 Ga0207641_10162796 3300026088 Bacteria 2030
208 Ga0207648_10216629 3300026089 Bacteria 1701
209 Ga0207676_10073967 3300026095 Bacteria 2744
210 Ga0207676_10146047 3300026095 Bacteria 2032
211 Ga0207676_10298431 3300026095 Bacteria 1470
212 Ga0207675_100001342 3300026118 Bacteria 24685
213 Ga0207675_100030494 3300026118 Bacteria 5023
214 Ga0207675_100119294 3300026118 Bacteria 2495
215 Ga0207428_10001127 3300027907 Bacteria 28979
216 Ga0268266_10139600 3300028379 Bacteria 2174
217 Ga0268265_10083332 3300028380 Bacteria 2531
218 Ga0268265_10214770 3300028380 Bacteria 1679
219 Ga0265338_10003833 3300028800 Bacteria 20891
220 Ga0265338_10004247 3300028800 Bacteria 19478
221 Ga0265338_10170648 3300028800 Bacteria 1669
222 Ga0265327_10023857 3300031251 Bacteria 3608
223 Ga0307408_100027423 3300031548 Bacteria 3925
224 Ga0316575_10023070 3300031665 Bacteria 2404
225 Ga0265314_10000027 3300031711 Bacteria 278331
226 Ga0316576_10006360 3300031727 Bacteria 7344
227 Ga0316576_10006979 3300031727 Bacteria 7065
228 Ga0316576_10018279 3300031727 Bacteria 4782
229 Ga0316578_10002496 3300031728 Bacteria 8106
230 Ga0307516_10324900 3300031730 Unclassified 1209
231 Ga0307407_10205730 3300031903 Bacteria 1322
232 Ga0307412_10285941 3300031911 Bacteria 1297
233 Ga0307416_100182345 3300032002 Unclassified 1969
234 Ga0307416_100585576 3300032002 Bacteria 1194
235 Ga0307411_10273402 3300032005 Bacteria 1341
236 Ga0316583_10034119 3300032133 Bacteria 1805
237 Ga0316585_10000663 3300032137 Bacteria 8539
238 Ga0316580_10000808 3300032139 Bacteria 7660
239 Ga0373927_0129699 3300035695 Bacteria 1647
240 Ga0316582_0030510 3300036647 Bacteria 3285
241 Ga0436364_0102974 3300037853 Bacteria 74907
242 Ga0436364_0856907 3300037853 Bacteria 71959
243 Ga0436364_0946486 3300037853 Bacteria 2486
244 Ga0436364_1403524 3300037853 Bacteria 1198
245 Ga0436365_0404374 3300039437 Bacteria 3663
246 Ga0436365_0695157 3300039437 Bacteria 511493
247 Ga0436365_1341967 3300039437 Bacteria 5954
248 Ga0436365_1753418 3300039437 Bacteria 95553
249 Ga0436360_0323079 3300039438 Unclassified 2380
250 Ga0436362_0474690 3300039453 Bacteria 2623
251 Ga0451577_0031372 3300042876 Bacteria 4795
252 Ga0453683_0092091 3300044673 Bacteria 1900
253 Ga0453683_0103026 3300044673 Bacteria 1792
254 Ga0451576_0012517 3300045051 Bacteria 9524
255 Ga0451576_0193261 3300045051 Bacteria 2126
256 Ga0451576_0409655 3300045051 Unclassified 1422
257 Ga0495663_0000868 3300046525 Bacteria 10196
258 Ga0495598_0000511 3300046537 Bacteria 7189
259 Ga0495621_0000876 3300046539 Bacteria 7688
260 Ga0495672_0018878 3300047320 Bacteria 4566
261 Ga0495684_0142714 3300047471 Bacteria 1795
262 Ga0496106_0002936 3300048909 Bacteria 12695
263 Ga0496106_0015000 3300048909 Bacteria 5734
264 Ga0496109_0290687 3300048912 Unclassified 1541
265 Ga0501292_000576 3300049515 Bacteria 4541
266 Ga0501297_002071 3300049520 Bacteria 1915
267 Ga0501043_0000266 3300049579 Bacteria 47581
268 Ga0501047_0001500 3300049581 Bacteria 22757
269 Ga0501067_0059340 3300049583 Bacteria 2118
270 Ga0501072_0000791 3300049588 Bacteria 23246
271 Ga0501217_002094 3300049661 Bacteria 3871
272 Ga0501223_016674 3300049663 Bacteria 1451
273 Ga0501227_003529 3300049665 Bacteria 3391
274 Ga0501225_0014172 3300049705 Bacteria 2227
275 Ga0501268_012269 3300049765 Bacteria 1367
276 Ga0501035_0118680 3300049822 Bacteria 2314
277 Ga0501044_0190265 3300049823 Bacteria 2015
278 nmdc:mga05p37_245485_c1 3300050507 Bacteria 2150
279 nmdc:mga05p37_396372_c1 3300050507 Bacteria 1613
280 nmdc:mga05p37_585322_c1 3300050507 Unclassified 1263
281 nmdc:mga05p37_59400_c1 3300050507 Bacteria 4709
282 nmdc:mga0qj67_151651_c1 3300050509 Unclassified 1880
283 nmdc:mga0qj67_27263_c1 3300050509 Bacteria 4426
284 nmdc:mga06r32_163263_c1 3300050510 Unclassified 2210
285 nmdc:mga08y16_68174_c1 3300050511 Bacteria 3710
286 nmdc:mga0n895_256135_c1 3300050512 Bacteria 1776
287 nmdc:mga08x19_19_c1 3300050514 Bacteria 315774
288 nmdc:mga0a205_123925_c1 3300050515 Bacteria 2484
289 nmdc:mga0a205_47018_c2 3300050515 Bacteria 2940
290 Ga0500616_0004612 3300053153 Bacteria 9736

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048912 Ga0496109_0290687 Ga0496109_0290687_586_1512 293
2 3300005549 Ga0070704_100052133 Ga0070704_1000521332 302
3 3300009147 Ga0114129_10374506 Ga0114129_103745062 302
4 3300050507 nmdc:mga05p37_396372_c1 nmdc:mga05p37_396372_c1_378_1379 302
5 3300005468 Ga0070707_100003707 Ga0070707_1000037078 304
6 3300025922 Ga0207646_10004780 Ga0207646_100047806 304
7 3300006852 Ga0075433_10173426 Ga0075433_101734262 305
8 3300009147 Ga0114129_10304242 Ga0114129_103042422 305
9 3300028380 Ga0268265_10214770 Ga0268265_102147702 305
10 3300050507 nmdc:mga05p37_585322_c1 nmdc:mga05p37_585322_c1_60_1064 305
11 3300050515 nmdc:mga0a205_123925_c1 nmdc:mga0a205_123925_c1_848_1852 305
12 3300005290 Ga0065712_10000114 Ga0065712_1000011470 306
13 3300005293 Ga0065715_10089539 Ga0065715_100895399 306
14 3300005338 Ga0068868_100269446 Ga0068868_1002694462 306
15 3300005578 Ga0068854_100095662 Ga0068854_1000956622 306
16 3300005719 Ga0068861_100054078 Ga0068861_1000540783 306
17 3300005840 Ga0068870_10040363 Ga0068870_100403632 306
18 3300005844 Ga0068862_100100641 Ga0068862_1001006412 306
19 3300009553 Ga0105249_10022797 Ga0105249_100227974 306
20 3300010375 Ga0105239_10014565 Ga0105239_100145656 306
21 3300025908 Ga0207643_10050170 Ga0207643_100501702 306
22 3300025961 Ga0207712_10082479 Ga0207712_100824792 306
23 3300026023 Ga0207677_10077041 Ga0207677_100770412 306
24 3300026095 Ga0207676_10146047 Ga0207676_101460471 306
25 3300026118 Ga0207675_100001342 Ga0207675_10000134210 306
26 3300031548 Ga0307408_100027423 Ga0307408_1000274233 306
27 3300032005 Ga0307411_10273402 Ga0307411_102734022 306
28 3300048909 Ga0496106_0015000 Ga0496106_0015000_1894_2895 306
29 3300049515 Ga0501292_000576 Ga0501292_000576_2896_3897 306
30 3300049520 Ga0501297_002071 Ga0501297_002071_835_1836 306
31 3300049661 Ga0501217_002094 Ga0501217_002094_955_1956 306
32 3300049663 Ga0501223_016674 Ga0501223_016674_73_1074 306
33 3300049665 Ga0501227_003529 Ga0501227_003529_2290_3291 306
34 3300049705 Ga0501225_0014172 Ga0501225_0014172_140_1141 306
35 3300049765 Ga0501268_012269 Ga0501268_012269_176_1177 306
36 3300005563 Ga0068855_100440592 Ga0068855_1004405922 313
37 3300025949 Ga0207667_10370041 Ga0207667_103700412 313
38 3300050515 nmdc:mga0a205_47018_c2 nmdc:mga0a205_47018_c2_1399_2358 315
39 3300003203 JGI25406J46586_10027223 JGI25406J46586_100272232 316
40 3300005985 Ga0081539_10000235 Ga0081539_100002358 316
41 3300031251 Ga0265327_10023857 Ga0265327_100238573 317
42 3300025935 Ga0207709_10107655 Ga0207709_101076552 318
43 3300005329 Ga0070683_100187176 Ga0070683_1001871762 319
44 3300005440 Ga0070705_100000017 Ga0070705_10000001749 319
45 3300005444 Ga0070694_100121487 Ga0070694_1001214872 319
46 3300005545 Ga0070695_100271357 Ga0070695_1002713572 319
47 3300005546 Ga0070696_100001508 Ga0070696_1000015084 319
48 3300005547 Ga0070693_100023362 Ga0070693_1000233623 319
49 3300006844 Ga0075428_100233839 Ga0075428_1002338392 319
50 3300006852 Ga0075433_10118318 Ga0075433_101183182 319
51 3300013307 Ga0157372_10600352 Ga0157372_106003521 319
52 3300044673 Ga0453683_0103026 Ga0453683_0103026_111_1079 319
53 3300005467 Ga0070706_100001479 Ga0070706_1000014799 320
54 3300005467 Ga0070706_100008144 Ga0070706_1000081441 320
55 3300005618 Ga0068864_100141572 Ga0068864_1001415722 320
56 3300014325 Ga0163163_10027509 Ga0163163_100275092 320
57 3300014969 Ga0157376_10125040 Ga0157376_101250402 320
58 3300025910 Ga0207684_10003603 Ga0207684_100036037 320
59 3300025910 Ga0207684_10046928 Ga0207684_100469282 320
60 3300025925 Ga0207650_10197787 Ga0207650_101977872 320
61 3300025934 Ga0207686_10098791 Ga0207686_100987912 320
62 3300026095 Ga0207676_10073967 Ga0207676_100739672 320
63 3300031727 Ga0316576_10006360 Ga0316576_100063603 320
64 3300031727 Ga0316576_10006979 Ga0316576_100069792 320
65 3300031727 Ga0316576_10018279 Ga0316576_100182793 320
66 3300031728 Ga0316578_10002496 Ga0316578_100024964 320
67 3300032133 Ga0316583_10034119 Ga0316583_100341192 320
68 3300032137 Ga0316585_10000663 Ga0316585_100006634 320
69 3300032139 Ga0316580_10000808 Ga0316580_100008083 320
70 3300035695 Ga0373927_0129699 Ga0373927_0129699_428_1405 320
71 3300036647 Ga0316582_0030510 Ga0316582_0030510_2182_3213 320
72 3300006844 Ga0075428_100000336 Ga0075428_10000033619 321
73 3300006846 Ga0075430_100167988 Ga0075430_1001679882 321
74 3300006846 Ga0075430_100337425 Ga0075430_1003374251 321
75 3300006847 Ga0075431_100062202 Ga0075431_1000622022 321
76 3300013308 Ga0157375_10002301 Ga0157375_100023012 321
77 3300028800 Ga0265338_10004247 Ga0265338_1000424710 321
78 3300005331 Ga0070670_100001617 Ga0070670_10000161715 322
79 3300005353 Ga0070669_100000544 Ga0070669_10000054416 322
80 3300005364 Ga0070673_100030653 Ga0070673_1000306532 322
81 3300005539 Ga0068853_100021972 Ga0068853_1000219722 322
82 3300005841 Ga0068863_100077928 Ga0068863_1000779282 322
83 3300009098 Ga0105245_10060466 Ga0105245_100604663 322
84 3300009148 Ga0105243_10116214 Ga0105243_101162142 322
85 3300009148 Ga0105243_10179291 Ga0105243_101792912 322
86 3300014325 Ga0163163_10198267 Ga0163163_101982672 322
87 3300021384 Ga0213876_10000006 Ga0213876_10000006467 322
88 3300021384 Ga0213876_10092562 Ga0213876_100925621 322
89 3300021388 Ga0213875_10000144 Ga0213875_1000014440 322
90 3300025906 Ga0207699_10138882 Ga0207699_101388822 322
91 3300025910 Ga0207684_10031143 Ga0207684_100311432 322
92 3300025923 Ga0207681_10003365 Ga0207681_100033654 322
93 3300025925 Ga0207650_10002271 Ga0207650_1000227112 322
94 3300025942 Ga0207689_10005962 Ga0207689_100059627 322
95 3300025960 Ga0207651_10020856 Ga0207651_100208561 322
96 3300026041 Ga0207639_10011011 Ga0207639_100110116 322
97 3300026088 Ga0207641_10063991 Ga0207641_100639912 322
98 3300031911 Ga0307412_10285941 Ga0307412_102859412 322
99 3300037853 Ga0436364_0102974 Ga0436364_0102974_39380_40393 322
100 3300039437 Ga0436365_0404374 Ga0436365_0404374_2576_3589 322
101 3300039437 Ga0436365_0695157 Ga0436365_0695157_98773_99753 322
102 3300005345 Ga0070692_10175721 Ga0070692_101757211 323
103 3300005436 Ga0070713_100232249 Ga0070713_1002322492 323
104 3300005439 Ga0070711_100000028 Ga0070711_10000002829 323
105 3300005445 Ga0070708_100101012 Ga0070708_1001010122 323
106 3300005458 Ga0070681_10051766 Ga0070681_100517664 323
107 3300005471 Ga0070698_100060234 Ga0070698_1000602341 323
108 3300005518 Ga0070699_100000047 Ga0070699_10000004772 323
109 3300005518 Ga0070699_100123814 Ga0070699_1001238142 323
110 3300005535 Ga0070684_100144378 Ga0070684_1001443783 323
111 3300005546 Ga0070696_100000054 Ga0070696_1000000549 323
112 3300005547 Ga0070693_100002195 Ga0070693_1000021953 323
113 3300005564 Ga0070664_100211257 Ga0070664_1002112572 323
114 3300005617 Ga0068859_100036516 Ga0068859_1000365161 323
115 3300005841 Ga0068863_100460968 Ga0068863_1004609681 323
116 3300006173 Ga0070716_100000017 Ga0070716_10000001713 323
117 3300006852 Ga0075433_10229969 Ga0075433_102299692 323
118 3300006914 Ga0075436_100005870 Ga0075436_1000058708 323
119 3300006931 Ga0097620_100036516 Ga0097620_1000365161 323
120 3300009147 Ga0114129_10084513 Ga0114129_100845133 323
121 3300009147 Ga0114129_10293411 Ga0114129_102934112 323
122 3300009553 Ga0105249_10148162 Ga0105249_101481622 323
123 3300013100 Ga0157373_10117693 Ga0157373_101176932 323
124 3300013306 Ga0163162_10628586 Ga0163162_106285862 323
125 3300021384 Ga0213876_10001475 Ga0213876_100014759 323
126 3300025906 Ga0207699_10000009 Ga0207699_1000000958 323
127 3300025912 Ga0207707_10170876 Ga0207707_101708762 323
128 3300025914 Ga0207671_10035606 Ga0207671_100356062 323
129 3300025916 Ga0207663_10000032 Ga0207663_1000003261 323
130 3300025939 Ga0207665_10000033 Ga0207665_1000003313 323
131 3300025941 Ga0207711_10055909 Ga0207711_100559091 323
132 3300028800 Ga0265338_10170648 Ga0265338_101706482 323
133 3300031665 Ga0316575_10023070 Ga0316575_100230702 323
134 3300031903 Ga0307407_10205730 Ga0307407_102057301 323
135 3300032002 Ga0307416_100182345 Ga0307416_1001823451 323
136 3300039437 Ga0436365_1753418 Ga0436365_1753418_90629_91627 323
137 3300042876 Ga0451577_0031372 Ga0451577_0031372_2397_3404 323
138 3300044673 Ga0453683_0092091 Ga0453683_0092091_294_1301 323
139 3300045051 Ga0451576_0012517 Ga0451576_0012517_7624_8631 323
140 3300049588 Ga0501072_0000791 Ga0501072_0000791_13591_14595 323
141 3300049823 Ga0501044_0190265 Ga0501044_0190265_490_1473 323
142 3300050507 nmdc:mga05p37_59400_c1 nmdc:mga05p37_59400_c1_2076_3086 323
143 3300050514 nmdc:mga08x19_19_c1 nmdc:mga08x19_19_c1_283870_284856 323
144 3300001426 JGI24030J14995_100086 JGI24030J14995_1000863 324
145 3300002074 JGI24748J21848_1000010 JGI24748J21848_100001046 324
146 3300002239 JGI24034J26672_10000001 JGI24034J26672_10000001636 324
147 3300005289 Ga0065704_10091612 Ga0065704_100916122 324
148 3300005295 Ga0065707_10083075 Ga0065707_100830758 324
149 3300005330 Ga0070690_100018147 Ga0070690_1000181473 324
150 3300005330 Ga0070690_100187253 Ga0070690_1001872531 324
151 3300005337 Ga0070682_100088897 Ga0070682_1000888972 324
152 3300005355 Ga0070671_100037571 Ga0070671_1000375711 324
153 3300005364 Ga0070673_100014619 Ga0070673_1000146193 324
154 3300005438 Ga0070701_10023286 Ga0070701_100232862 324
155 3300005441 Ga0070700_100062016 Ga0070700_1000620162 324
156 3300005444 Ga0070694_100080147 Ga0070694_1000801472 324
157 3300005459 Ga0068867_100156687 Ga0068867_1001566872 324
158 3300005471 Ga0070698_100298876 Ga0070698_1002988761 324
159 3300005618 Ga0068864_100280611 Ga0068864_1002806112 324
160 3300005842 Ga0068858_100000005 Ga0068858_100000005103 324
161 3300006852 Ga0075433_10106119 Ga0075433_101061192 324
162 3300006871 Ga0075434_100037076 Ga0075434_1000370764 324
163 3300009101 Ga0105247_10000002 Ga0105247_10000002360 324
164 3300009148 Ga0105243_10000431 Ga0105243_100004315 324
165 3300009148 Ga0105243_10150423 Ga0105243_101504232 324
166 3300009176 Ga0105242_10003247 Ga0105242_100032473 324
167 3300009553 Ga0105249_10412268 Ga0105249_104122681 324
168 3300013297 Ga0157378_10000003 Ga0157378_1000000347 324
169 3300013297 Ga0157378_10060353 Ga0157378_100603533 324
170 3300013297 Ga0157378_10358143 Ga0157378_103581432 324
171 3300013308 Ga0157375_10023921 Ga0157375_100239212 324
172 3300013308 Ga0157375_10240165 Ga0157375_102401652 324
173 3300014326 Ga0157380_10012602 Ga0157380_100126023 324
174 3300025223 Ga0207672_1000036 Ga0207672_100003610 324
175 3300025900 Ga0207710_10000002 Ga0207710_10000002360 324
176 3300025923 Ga0207681_10116260 Ga0207681_101162602 324
177 3300025931 Ga0207644_10019846 Ga0207644_100198465 324
178 3300025934 Ga0207686_10010477 Ga0207686_100104775 324
179 3300025935 Ga0207709_10001350 Ga0207709_100013506 324
180 3300026035 Ga0207703_10000150 Ga0207703_100001502 324
181 3300026035 Ga0207703_10196773 Ga0207703_101967732 324
182 3300026089 Ga0207648_10216629 Ga0207648_102166292 324
183 3300026095 Ga0207676_10298431 Ga0207676_102984312 324
184 3300026118 Ga0207675_100119294 Ga0207675_1001192942 324
185 3300047320 Ga0495672_0018878 Ga0495672_0018878_2541_3551 324
186 3300048909 Ga0496106_0002936 Ga0496106_0002936_1117_2130 324
187 3300049583 Ga0501067_0059340 Ga0501067_0059340_335_1351 324
188 3300005337 Ga0070682_100000073 Ga0070682_10000007366 325
189 3300005338 Ga0068868_100000159 Ga0068868_10000015920 325
190 3300007076 Ga0075435_100298257 Ga0075435_1002982571 325
191 3300009553 Ga0105249_10066502 Ga0105249_100665023 325
192 3300013306 Ga0163162_10206199 Ga0163162_102061992 325
193 3300025900 Ga0207710_10006405 Ga0207710_100064052 325
194 3300025961 Ga0207712_10005289 Ga0207712_100052896 325
195 3300025961 Ga0207712_10025814 Ga0207712_100258144 325
196 3300026023 Ga0207677_10000075 Ga0207677_1000007557 325
197 3300026118 Ga0207675_100030494 Ga0207675_1000304943 325
198 3300031730 Ga0307516_10324900 Ga0307516_103249002 325
199 3300045051 Ga0451576_0409655 Ga0451576_0409655_220_1212 325
200 3300047471 Ga0495684_0142714 Ga0495684_0142714_526_1572 325
201 3300005467 Ga0070706_100198801 Ga0070706_1001988011 326
202 3300005518 Ga0070699_100362954 Ga0070699_1003629541 326
203 3300025922 Ga0207646_10250102 Ga0207646_102501022 326
204 3300028379 Ga0268266_10139600 Ga0268266_101396003 326
205 3300037853 Ga0436364_0946486 Ga0436364_0946486_1263_2282 326
206 3300050509 nmdc:mga0qj67_151651_c1 nmdc:mga0qj67_151651_c1_316_1311 326
207 3300050510 nmdc:mga06r32_163263_c1 nmdc:mga06r32_163263_c1_688_1683 326
208 3300005289 Ga0065704_10097275 Ga0065704_100972752 327
209 3300005295 Ga0065707_10000594 Ga0065707_1000059415 327
210 3300005329 Ga0070683_100000027 Ga0070683_10000002733 327
211 3300005471 Ga0070698_100062708 Ga0070698_1000627083 327
212 3300005535 Ga0070684_100000293 Ga0070684_1000002933 327
213 3300005617 Ga0068859_100001573 Ga0068859_10000157320 327
214 3300005844 Ga0068862_100013567 Ga0068862_1000135672 327
215 3300006844 Ga0075428_100006359 Ga0075428_10000635911 327
216 3300006880 Ga0075429_100112560 Ga0075429_1001125602 327
217 3300006931 Ga0097620_100001573 Ga0097620_1000015735 327
218 3300009093 Ga0105240_10027458 Ga0105240_100274586 327
219 3300009094 Ga0111539_10001205 Ga0111539_100012054 327
220 3300009148 Ga0105243_10072451 Ga0105243_100724515 327
221 3300009176 Ga0105242_10001443 Ga0105242_100014434 327
222 3300009553 Ga0105249_10015448 Ga0105249_100154482 327
223 3300011119 Ga0105246_10055992 Ga0105246_100559922 327
224 3300011119 Ga0105246_10105791 Ga0105246_101057912 327
225 3300013104 Ga0157370_10150363 Ga0157370_101503632 327
226 3300013105 Ga0157369_10001392 Ga0157369_100013927 327
227 3300025908 Ga0207643_10244182 Ga0207643_102441821 327
228 3300025935 Ga0207709_10125479 Ga0207709_101254792 327
229 3300025944 Ga0207661_10000015 Ga0207661_10000015152 327
230 3300025961 Ga0207712_10116513 Ga0207712_101165132 327
231 3300027907 Ga0207428_10001127 Ga0207428_100011273 327
232 3300028380 Ga0268265_10083332 Ga0268265_100833322 327
233 3300032002 Ga0307416_100585576 Ga0307416_1005855761 327
234 3300037853 Ga0436364_1403524 Ga0436364_1403524_37_1038 327
235 3300039437 Ga0436365_1341967 Ga0436365_1341967_54_1052 327
236 3300039438 Ga0436360_0323079 Ga0436360_0323079_850_1845 327
237 3300045051 Ga0451576_0193261 Ga0451576_0193261_589_1623 327
238 3300050507 nmdc:mga05p37_245485_c1 nmdc:mga05p37_245485_c1_1125_2108 327
239 3300050511 nmdc:mga08y16_68174_c1 nmdc:mga08y16_68174_c1_125_1141 327
240 3300050512 nmdc:mga0n895_256135_c1 nmdc:mga0n895_256135_c1_667_1683 327
241 3300053153 Ga0500616_0004612 Ga0500616_0004612_351_1355 327
242 3300005290 Ga0065712_10096778 Ga0065712_100967782 328
243 3300005295 Ga0065707_10083441 Ga0065707_100834415 328
244 3300005331 Ga0070670_100000025 Ga0070670_10000002541 328
245 3300005364 Ga0070673_100139941 Ga0070673_1001399412 328
246 3300005535 Ga0070684_100083409 Ga0070684_1000834093 328
247 3300005617 Ga0068859_100008758 Ga0068859_1000087584 328
248 3300006237 Ga0097621_100232909 Ga0097621_1002329092 328
249 3300006931 Ga0097620_100008758 Ga0097620_1000087584 328
250 3300009177 Ga0105248_10007359 Ga0105248_100073595 328
251 3300014969 Ga0157376_10000018 Ga0157376_1000001893 328
252 3300025925 Ga0207650_10000117 Ga0207650_1000011750 328
253 3300025941 Ga0207711_10008101 Ga0207711_100081015 328
254 3300025960 Ga0207651_10046383 Ga0207651_100463832 328
255 3300028800 Ga0265338_10003833 Ga0265338_100038337 328
256 3300031711 Ga0265314_10000027 Ga0265314_10000027189 328
257 3300046525 Ga0495663_0000868 Ga0495663_0000868_6723_7739 328
258 3300046537 Ga0495598_0000511 Ga0495598_0000511_2911_3927 328
259 3300046539 Ga0495621_0000876 Ga0495621_0000876_1440_2456 328
260 2162886011 MRS1b_contig_6058551 MRS1b_0184.00003200 329
261 3300005290 Ga0065712_10008868 Ga0065712_100088682 329
262 3300005295 Ga0065707_10086887 Ga0065707_100868874 329
263 3300005340 Ga0070689_100176932 Ga0070689_1001769322 329
264 3300005354 Ga0070675_100117715 Ga0070675_1001177152 329
265 3300005441 Ga0070700_100000068 Ga0070700_10000006823 329
266 3300005458 Ga0070681_10206794 Ga0070681_102067942 329
267 3300005468 Ga0070707_100000706 Ga0070707_10000070612 329
268 3300005471 Ga0070698_100000562 Ga0070698_10000056218 329
269 3300005518 Ga0070699_100027030 Ga0070699_1000270303 329
270 3300005536 Ga0070697_100000250 Ga0070697_10000025027 329
271 3300005549 Ga0070704_100007193 Ga0070704_1000071935 329
272 3300005618 Ga0068864_100583784 Ga0068864_1005837841 329
273 3300006028 Ga0070717_10114056 Ga0070717_101140562 329
274 3300006846 Ga0075430_100019957 Ga0075430_1000199574 329
275 3300006871 Ga0075434_100562194 Ga0075434_1005621941 329
276 3300009147 Ga0114129_10497969 Ga0114129_104979693 329
277 3300013308 Ga0157375_10007147 Ga0157375_100071476 329
278 3300013308 Ga0157375_10240125 Ga0157375_102401252 329
279 3300021388 Ga0213875_10002320 Ga0213875_100023204 329
280 3300025922 Ga0207646_10000700 Ga0207646_1000070021 329
281 3300025922 Ga0207646_10002141 Ga0207646_1000214110 329
282 3300025934 Ga0207686_10084386 Ga0207686_100843862 329
283 3300026075 Ga0207708_10000130 Ga0207708_1000013011 329
284 3300026088 Ga0207641_10162796 Ga0207641_101627962 329
285 3300037853 Ga0436364_0856907 Ga0436364_0856907_67369_68388 329
286 3300039453 Ga0436362_0474690 Ga0436362_0474690_1110_2114 329
287 3300049579 Ga0501043_0000266 Ga0501043_0000266_22898_23917 329
288 3300049581 Ga0501047_0001500 Ga0501047_0001500_2055_3074 329
289 3300049822 Ga0501035_0118680 Ga0501035_0118680_1069_2088 329
290 3300050509 nmdc:mga0qj67_27263_c1 nmdc:mga0qj67_27263_c1_1789_2832 329

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

6

248

0.97

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

7

315

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1rpn-assembly3.cif.gz_C crystal structure of gdp-d-mannose 4,6-dehydratase in complexes with gdp and nadph 0.9769 1 319
2z95-assembly1.cif.gz_C crystal structure of gdp-d-mannose dehydratase from aquifex aeolicus vf5 0.9729 1 318
2z95-assembly1.cif.gz_D crystal structure of gdp-d-mannose dehydratase from aquifex aeolicus vf5 0.9727 1 315
1n7g-assembly1.cif.gz_D crystal structure of the gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp-rhamnose. 0.9697 1 319
1rpn-assembly3.cif.gz_C crystal structure of gdp-d-mannose 4,6-dehydratase in complexes with gdp and nadph 0.965 1 319
ID Description Score Start End Superfamily
af_P0AC88_3_270_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9716 2 259 3.40.50.720
af_F1QPT3_45_368_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9576 26 314 3.40.50.720
af_Q4CM81_7_150_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9508 1 140 3.40.50.720
af_Q4D941_50_182_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9494 183 296 3.90.25.10
af_Q4CM81_8_135_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9413 3 124 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A846NYP9-F1-model_v4 deleted 0.9958 142 318
AF-A0A2G9YHF7-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.9898 91 317 GO:0008446
GO:0042351
AF-K9ZLN4-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) 0.9892 2 320 GO:0008446
GO:0042351
GO:0070401
AF-A0A381X648-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.9874 68 323 GO:0008446
GO:0042351
AF-X0UUD4-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.9874 102 324 GO:0008446
GO:0042351

Feature Viewer

pLDDT pTM Quality
92.71 0.91 High
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Predicted Structure (AlphaFold2)

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