F389536

General Info

Members Datasets Scaffolds Average Seq Length
290 188 264 341

Family's Representative Sequence

Representative Sequence 3300002705|JGI25156J39149_1007459|JGI25156J39149_10074592
Length 378
Sequence MEPGPAKAVSMRPSKELEAMTVKVSNRLARPLSMVLAAGLLATAGMSLAQNAPAPASSAPGQVQNLEAVSVSGVQPGPGLWKVSKGDHVMWVLGTLSPLPDRIQWKTDEVEQAIADSQEVLGPPSVALKAKAGFFGKLFLLPSLIGARKNPDGQTLQQMVPAPDYERWLVLKQQYIGSDRGIESWRPIFAAVELYDKAIKRYGLTSSGGVKDTVRELAKKHNVNFNTVRYTMLVEEPRSAVKTFKSSPMDDRECFGRTLDAVQREMGRITERANAWATGDIDLLRSLPMNDQREACLSAVTEAGFAKQLGFSDVKQKAEAMWISEAEKALNTNTQTFAMLPMQDVLSPKGLIARLKAQGYQVEAPDGSDAEGVAPVQP

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
3 2643221559 Lysobacter sp. Root559 Isolate Unclassified
4 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
5 2643221573 Lysobacter sp. Root604 Isolate Unclassified
6 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
7 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
8 2643221720 Lysobacter sp. Root916 Isolate Unclassified
9 2643221728 Lysobacter sp. Root983 Isolate Unclassified
10 2739367700 Dyella sp. YR388 Isolate Unclassified
11 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
12 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
13 2884411467 Dyella sp. AD56 Isolate Rhizosphere
14 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
15 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
16 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
17 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
18 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
19 2919513703 Luteimonas sp. 3794 Isolate Unclassified
20 2919675420 Luteimonas terrae 4099 Isolate Unclassified
21 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
22 2928963466 Dyella japonica 1073 Isolate Unclassified
23 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
24 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
25 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
26 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
27 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
28 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
29 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
30 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
31 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
32 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
33 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
34 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
35 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
36 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
37 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
38 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
39 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
40 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
41 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
42 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
43 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
44 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
45 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
46 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
47 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
48 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
49 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
50 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
51 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
52 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
53 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
54 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
55 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
56 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
57 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
58 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
59 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
60 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
61 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
62 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
63 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
64 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
65 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
66 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
67 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
68 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
69 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
70 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
71 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
72 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
73 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
74 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
75 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
76 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
77 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
78 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
79 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
80 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
81 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
85 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
86 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
87 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
88 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
89 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
90 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
95 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
96 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
98 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
99 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
101 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
102 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
110 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
133 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
134 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
135 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
136 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
137 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
138 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
139 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
140 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
141 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
142 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
143 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
144 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
145 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
146 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
147 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
148 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
149 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
150 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
151 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
152 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
153 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
154 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
155 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
156 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
157 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
158 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
159 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
160 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
161 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
162 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
163 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
164 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
165 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
166 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
167 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
168 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
169 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
172 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
173 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
181 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
182 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
187 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
188 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.03
Metatranscriptomes 0
Isolates 8.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.24
Nodule 0
Rhizoplane 3.79
Rhizosphere 47.59
Stem 0
Stem Tuber 0
Unclassified 21.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1866950 2162886007 Bacteria 2225
2 JGI24735J21928_10017262 3300002067 Bacteria 2233
3 JGI25156J39149_1007459 3300002705 Bacteria 2867
4 JGI25162J39368_1000548 3300002737 Bacteria 27796
5 JGI25162J39368_1001347 3300002737 Bacteria 13620
6 JGI25162J39368_1001674 3300002737 Bacteria 10888
7 JGI25162J39368_1001677 3300002737 Bacteria 10866
8 JGI25157J39369_1000426 3300002741 Bacteria 27796
9 JGI25157J39369_1001199 3300002741 Bacteria 10904
10 JGI25163J39215_1000522 3300002771 Bacteria 11314
11 JGI25164J39214_1000235 3300002772 Bacteria 42429
12 JGI25164J39214_1000619 3300002772 Bacteria 15105
13 JGI25164J39214_1001132 3300002772 Bacteria 7581
14 JGI25165J46597_1000433 3300003214 Bacteria 42429
15 JGI25165J46597_1001601 3300003214 Bacteria 10858
16 JGI25165J46597_1001610 3300003214 Bacteria 10812
17 rootH2_10086979 3300003320 Bacteria 3778
18 rootH2_10257428 3300003320 Bacteria 1738
19 rootL2_10336361 3300003322 Bacteria 1605
20 Ga0055533_1002075 3300003756 Bacteria 4847
21 Ga0055535_1000643 3300003761 Bacteria 27796
22 Ga0055542_1000475 3300003762 Bacteria 37399
23 Ga0055542_1000668 3300003762 Bacteria 27796
24 Ga0055529_1000509 3300003763 Bacteria 34936
25 Ga0055526_1000405 3300003771 Bacteria 34858
26 Ga0055537_1004270 3300003773 Bacteria 4127
27 Ga0055536_1002103 3300003781 Bacteria 11339
28 Ga0055536_1002832 3300003781 Bacteria 9555
29 Ga0055536_1003096 3300003781 Bacteria 9048
30 Ga0055534_1000155 3300003784 Bacteria 51103
31 Ga0055528_1000093 3300003790 Bacteria 71453
32 Ga0055530_10001288 3300003791 Bacteria 18956
33 Ga0055530_10001878 3300003791 Bacteria 14434
34 Ga0055531_10002542 3300003794 Bacteria 12134
35 Ga0055531_10003741 3300003794 Bacteria 9555
36 Ga0055531_10004077 3300003794 Bacteria 9048
37 Ga0055531_10011346 3300003794 Bacteria 4312
38 Ga0055531_10019232 3300003794 Bacteria 2776
39 Ga0065704_10070393 3300005289 Bacteria 27063
40 Ga0065704_10082890 3300005289 Bacteria 3538
41 Ga0070683_100328693 3300005329 Bacteria 1455
42 Ga0070689_100012350 3300005340 Bacteria 6151
43 Ga0070661_100013637 3300005344 Bacteria 5707
44 Ga0070661_100020295 3300005344 Bacteria 4737
45 Ga0070692_10030899 3300005345 Bacteria 2681
46 Ga0070659_100004358 3300005366 Bacteria 10104
47 Ga0070714_100001747 3300005435 Bacteria 15844
48 Ga0070713_100000997 3300005436 Bacteria 18137
49 Ga0070694_100066335 3300005444 Bacteria 2476
50 Ga0070663_100117431 3300005455 Bacteria 2006
51 Ga0070681_10498398 3300005458 Unclassified 1131
52 Ga0070685_10009013 3300005466 Bacteria 5147
53 Ga0070684_100307486 3300005535 Bacteria 1455
54 Ga0068853_100005335 3300005539 Bacteria 10063
55 Ga0070665_100182486 3300005548 Bacteria 2099
56 Ga0070665_100242514 3300005548 Bacteria 1803
57 Ga0070664_100131024 3300005564 Bacteria 2202
58 Ga0068857_100089985 3300005577 Bacteria 2746
59 Ga0068856_100011708 3300005614 Bacteria 8507
60 Ga0068852_100308020 3300005616 Bacteria 1535
61 Ga0068858_100100044 3300005842 Bacteria 2704
62 Ga0068860_100020555 3300005843 Bacteria 6396
63 Ga0068862_100047307 3300005844 Bacteria 3671
64 Ga0075364_10000156 3300006051 Bacteria 29962
65 Ga0075364_10021048 3300006051 Bacteria 4108
66 Ga0068865_100014382 3300006881 Bacteria 5027
67 Ga0105251_10013305 3300009011 Bacteria 4607
68 Ga0105242_10010856 3300009176 Bacteria 6995
69 Ga0105237_10053107 3300009545 Bacteria 4065
70 Ga0105238_10013888 3300009551 Bacteria 8144
71 Ga0105238_10016952 3300009551 Bacteria 7391
72 Ga0105239_10034254 3300010375 Bacteria 5575
73 Ga0105239_10257289 3300010375 Bacteria 1962
74 Ga0105246_10027296 3300011119 Unclassified 3740
75 Ga0157373_10012638 3300013100 Bacteria 6208
76 Ga0157373_10058083 3300013100 Bacteria 2744
77 Ga0157373_10147237 3300013100 Bacteria 1657
78 Ga0157371_10023939 3300013102 Bacteria 4462
79 Ga0157370_10016488 3300013104 Bacteria 7476
80 Ga0157370_10349487 3300013104 Bacteria 1363
81 Ga0157369_10076503 3300013105 Unclassified 3587
82 Ga0157369_10620036 3300013105 Bacteria 1116
83 Ga0163162_10006791 3300013306 Bacteria 11101
84 Ga0163162_10165226 3300013306 Bacteria 2337
85 Ga0157372_10159585 3300013307 Bacteria 2605
86 Ga0157375_10011171 3300013308 Bacteria 7922
87 Ga0182008_10000264 3300014497 Bacteria 41157
88 Ga0182008_10004894 3300014497 Bacteria 7725
89 Ga0182008_10007460 3300014497 Bacteria 6036
90 Ga0182006_1007966 3300015261 Bacteria 4817
91 Ga0182006_1010726 3300015261 Bacteria 4060
92 Ga0182006_1018542 3300015261 Bacteria 2939
93 Ga0182006_1056017 3300015261 Bacteria 1503
94 Ga0182007_10005908 3300015262 Bacteria 5315
95 Ga0183368_1002 3300015687 Bacteria 1865598
96 Ga0209760_100308 3300025207 Bacteria 16185
97 Ga0209784_100139 3300025224 Bacteria 67802
98 Ga0209566_101584 3300025225 Bacteria 6053
99 Ga0209674_100014 3300025226 Bacteria 704989
100 Ga0209672_101047 3300025228 Bacteria 11888
101 Ga0207427_100084 3300025231 Bacteria 142663
102 Ga0207427_100177 3300025231 Bacteria 69113
103 Ga0207427_100240 3300025231 Bacteria 44187
104 Ga0207427_101273 3300025231 Bacteria 9625
105 Ga0209437_100037 3300025233 Bacteria 459730
106 Ga0209437_100294 3300025233 Bacteria 72367
107 Ga0209437_100364 3300025233 Bacteria 49354
108 Ga0209437_100527 3300025233 Bacteria 26554
109 Ga0209258_100034 3300025242 Bacteria 437372
110 Ga0209258_101122 3300025242 Bacteria 11212
111 Ga0209258_102175 3300025242 Bacteria 5401
112 Ga0209646_1001269 3300025246 Bacteria 7135
113 Ga0209026_1000143 3300025250 Bacteria 113602
114 Ga0209026_1000187 3300025250 Bacteria 90872
115 Ga0209148_1000001 3300025254 Bacteria 2545271
116 Ga0209148_1000002 3300025254 Bacteria 2399500
117 Ga0209759_1002772 3300025256 Bacteria 7421
118 Ga0209759_1004403 3300025256 Bacteria 5277
119 Ga0209233_1000002 3300025261 Bacteria 2501366
120 Ga0209233_1000112 3300025261 Bacteria 258251
121 Ga0209233_1000237 3300025261 Bacteria 92427
122 Ga0209565_1000014 3300025263 Bacteria 530302
123 Ga0209455_1000054 3300025272 Bacteria 358936
124 Ga0209455_1002085 3300025272 Bacteria 8004
125 Ga0209673_1001680 3300025273 Bacteria 18904
126 Ga0209675_1000021 3300025291 Bacteria 334833
127 Ga0209676_1000027 3300025292 Bacteria 560222
128 Ga0209676_1000079 3300025292 Bacteria 290447
129 Ga0209676_1001235 3300025292 Bacteria 26919
130 Ga0209676_1001263 3300025292 Bacteria 26313
131 Ga0209564_1000990 3300025295 Bacteria 35493
132 Ga0209050_1000153 3300025298 Bacteria 160851
133 Ga0209050_1000311 3300025298 Bacteria 98948
134 Ga0209050_1027688 3300025298 Bacteria 1861
135 Ga0209256_1002758 3300025299 Bacteria 13562
136 Ga0209256_1009634 3300025299 Bacteria 4196
137 Ga0209051_1000458 3300025303 Bacteria 53808
138 Ga0209257_1000081 3300025304 Bacteria 306577
139 Ga0209257_1000150 3300025304 Bacteria 191487
140 Ga0209257_1000530 3300025304 Bacteria 66163
141 Ga0209257_1001214 3300025304 Bacteria 32372
142 Ga0209257_1002331 3300025304 Bacteria 19134
143 Ga0209257_1021543 3300025304 Bacteria 2336
144 Ga0207680_10013285 3300025903 Unclassified 4225
145 Ga0207647_10001738 3300025904 Bacteria 16687
146 Ga0207647_10012267 3300025904 Bacteria 5971
147 Ga0207647_10015689 3300025904 Bacteria 5187
148 Ga0207671_10187047 3300025914 Bacteria 1614
149 Ga0207657_10001314 3300025919 Bacteria 26384
150 Ga0207657_10106352 3300025919 Bacteria 2322
151 Ga0207649_10012640 3300025920 Bacteria 4690
152 Ga0207694_10021418 3300025924 Bacteria 4899
153 Ga0207664_10000102 3300025929 Bacteria 77855
154 Ga0207664_10001002 3300025929 Bacteria 18936
155 Ga0207664_10006775 3300025929 Bacteria 7914
156 Ga0207690_10001212 3300025932 Bacteria 16290
157 Ga0207690_10001273 3300025932 Bacteria 15951
158 Ga0207690_10004492 3300025932 Bacteria 8240
159 Ga0207706_10064931 3300025933 Bacteria 3214
160 Ga0207686_10013204 3300025934 Bacteria 4566
161 Ga0207670_10004948 3300025936 Bacteria 7250
162 Ga0207704_10010434 3300025938 Bacteria 4533
163 Ga0207661_10153025 3300025944 Bacteria 1995
164 Ga0207679_10106341 3300025945 Bacteria 2205
165 Ga0207703_10066133 3300026035 Bacteria 2973
166 Ga0207639_10005742 3300026041 Bacteria 8403
167 Ga0207639_10294322 3300026041 Bacteria 1432
168 Ga0207678_10084787 3300026067 Bacteria 2709
169 Ga0207674_10008210 3300026116 Bacteria 12099
170 Ga0268266_10178820 3300028379 Bacteria 1930
171 Ga0268264_10062332 3300028381 Bacteria 3130
172 Ga0307414_10002081 3300032004 Bacteria 10404
173 Ga0316574_0093731 3300035398 Bacteria 1917
174 Ga0395901_0227938 3300038443 Bacteria 1946
175 Ga0439465_0002998 3300041413 Bacteria 5520
176 Ga0451787_720730 3300041441 Bacteria 1376
177 Ga0451800_0164194 3300041459 Unclassified 1511
178 Ga0451802_0684096 3300041460 Unclassified 1793
179 Ga0451837_0298351 3300041494 Bacteria 953
180 Ga0451843_0027950 3300041509 Unclassified 1707
181 Ga0439431_0012213 3300041997 Bacteria 1971
182 Ga0439432_044954 3300042006 Bacteria 1390
183 Ga0439449_0012728 3300042007 Bacteria 3163
184 Ga0439462_0047406 3300042015 Unclassified 1152
185 Ga0439446_0035937 3300042156 Bacteria 1447
186 Ga0439434_0025761 3300042435 Bacteria 1776
187 Ga0495627_002139 3300046453 Bacteria 9942
188 Ga0495591_032073 3300046458 Bacteria 1568
189 Ga0495638_0000725 3300046460 Bacteria 35497
190 Ga0495638_0010707 3300046460 Bacteria 6351
191 Ga0495638_0017324 3300046460 Bacteria 4806
192 Ga0495650_0001640 3300046471 Bacteria 20776
193 Ga0495607_0052564 3300046501 Bacteria 2359
194 Ga0495606_0001602 3300046507 Bacteria 29520
195 Ga0495606_0003319 3300046507 Bacteria 17179
196 Ga0495610_0003330 3300046512 Bacteria 12612
197 Ga0495610_0010613 3300046512 Bacteria 5710
198 Ga0495616_0038579 3300046513 Bacteria 2452
199 Ga0495616_0108937 3300046513 Bacteria 1289
200 Ga0495631_0001216 3300046518 Bacteria 15899
201 Ga0495643_0034475 3300046522 Bacteria 2792
202 Ga0495663_0000926 3300046525 Bacteria 9824
203 Ga0495663_0012370 3300046525 Bacteria 2377
204 Ga0495622_0005441 3300046557 Bacteria 5909
205 Ga0495633_0013234 3300046558 Bacteria 4355
206 Ga0495625_0000889 3300046660 Bacteria 40358
207 Ga0495671_0053622 3300046692 Bacteria 2001
208 Ga0495649_0001675 3300046694 Bacteria 16467
209 Ga0495660_0008730 3300046810 Bacteria 5924
210 Ga0495672_0000134 3300047320 Bacteria 110142
211 Ga0495672_0126343 3300047320 Bacteria 1352
212 Ga0495686_0005094 3300047472 Bacteria 10513
213 Ga0496104_0000016 3300048907 Bacteria 335025
214 Ga0496105_0000010 3300048908 Bacteria 309880
215 Ga0496110_0431355 3300048913 Bacteria 1201
216 Ga0496113_0041614 3300048916 Bacteria 3391
217 Ga0496113_0171281 3300048916 Bacteria 1719
218 Ga0496114_0010341 3300048917 Bacteria 7423
219 Ga0496115_0000208 3300048918 Bacteria 54170
220 Ga0496115_0000550 3300048918 Bacteria 29100
221 Ga0496116_0049233 3300048919 Bacteria 2820
222 Ga0496116_0062395 3300048919 Bacteria 2406
223 Ga0496117_0002688 3300048920 Bacteria 21966
224 Ga0496117_0007373 3300048920 Bacteria 10766
225 Ga0496117_0022350 3300048920 Bacteria 5076
226 Ga0496118_0001865 3300048921 Bacteria 30148
227 Ga0496118_0005640 3300048921 Bacteria 14117
228 Ga0496118_0008802 3300048921 Bacteria 10343
229 Ga0496118_0013983 3300048921 Bacteria 7539
230 Ga0496121_0004676 3300048924 Bacteria 18176
231 Ga0496121_0129048 3300048924 Bacteria 1896
232 Ga0496122_0007737 3300048925 Bacteria 11823
233 Ga0496122_0029981 3300048925 Bacteria 4570
234 Ga0496122_0046635 3300048925 Bacteria 3353
235 Ga0496122_0087247 3300048925 Bacteria 2144
236 Ga0496122_0089497 3300048925 Bacteria 2104
237 Ga0496123_0005398 3300048926 Bacteria 12880
238 Ga0496123_0011198 3300048926 Bacteria 7806
239 Ga0496123_0021567 3300048926 Bacteria 5001
240 Ga0496123_0047513 3300048926 Bacteria 2898
241 Ga0496124_0000018 3300048927 Bacteria 442940
242 Ga0496124_0000255 3300048927 Bacteria 102645
243 Ga0496124_0002801 3300048927 Bacteria 22094
244 Ga0496124_0005995 3300048927 Bacteria 13413
245 Ga0496124_0030961 3300048927 Bacteria 4739
246 Ga0496124_0117426 3300048927 Bacteria 2131
247 Ga0496126_0008160 3300048929 Bacteria 11330
248 Ga0496126_0010350 3300048929 Bacteria 9790
249 Ga0496126_0022958 3300048929 Bacteria 6055
250 Ga0496126_0089621 3300048929 Bacteria 2707
251 Ga0496126_0109341 3300048929 Bacteria 2409
252 Ga0496126_0148802 3300048929 Bacteria 2008
253 Ga0495678_019500 3300049459 Bacteria 3024
254 Ga0495682_0005330 3300049460 Bacteria 5360
255 Ga0501032_0171449 3300049569 Bacteria 1423
256 Ga0501034_0000273 3300049571 Bacteria 93198
257 Ga0501034_0431003 3300049571 Bacteria 1238
258 Ga0501047_0235021 3300049581 Bacteria 1685
259 Ga0501035_0046006 3300049822 Bacteria 3925
260 Ga0501044_0111125 3300049823 Bacteria 2748
261 nmdc:mga00v17_2351_c1 3300050491 Bacteria 9686
262 nmdc:mga00v17_27284_c1 3300050491 Bacteria 3334
263 nmdc:mga00v17_300680_c1 3300050491 Bacteria 1042
264 Ga0500634_0000038 3300053161 Bacteria 64146

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041494 Ga0451837_0298351 Ga0451837_0298351_72_932 286
2 3300042156 Ga0439446_0035937 Ga0439446_0035937_552_1412 286
3 3300050491 nmdc:mga00v17_300680_c1 nmdc:mga00v17_300680_c1_156_1019 286
4 3300005842 Ga0068858_100100044 Ga0068858_1001000442 287
5 3300009176 Ga0105242_10010856 Ga0105242_100108562 302
6 3300013306 Ga0163162_10006791 Ga0163162_100067914 302
7 3300013308 Ga0157375_10011171 Ga0157375_100111714 302
8 3300048907 Ga0496104_0000016 Ga0496104_0000016_134335_135273 302
9 3300048908 Ga0496105_0000010 Ga0496105_0000010_76356_77294 302
10 3300048913 Ga0496110_0431355 Ga0496110_0431355_78_992 303
11 3300049571 Ga0501034_0431003 Ga0501034_0431003_15_1007 303
12 3300047320 Ga0495672_0126343 Ga0495672_0126343_342_1340 306
13 3300005466 Ga0070685_10009013 Ga0070685_100090133 308
14 3300048927 Ga0496124_0002801 Ga0496124_0002801_11178_12176 309
15 3300028381 Ga0268264_10062332 Ga0268264_100623321 312
16 iso_pu_bacteria 2857442823 2857446387 312
17 3300025924 Ga0207694_10021418 Ga0207694_100214183 314
18 3300035398 Ga0316574_0093731 Ga0316574_0093731_759_1724 314
19 3300002737 JGI25162J39368_1001677 JGI25162J39368_10016776 317
20 3300002772 JGI25164J39214_1001132 JGI25164J39214_10011321 317
21 3300003214 JGI25165J46597_1001610 JGI25165J46597_10016104 317
22 3300025231 Ga0207427_100177 Ga0207427_10017765 317
23 3300025233 Ga0209437_100294 Ga0209437_10029444 317
24 3300025261 Ga0209233_1000237 Ga0209233_100023727 317
25 3300041413 Ga0439465_0002998 Ga0439465_0002998_2769_3740 317
26 3300041997 Ga0439431_0012213 Ga0439431_0012213_108_1079 317
27 3300048925 Ga0496122_0089497 Ga0496122_0089497_1120_2091 317
28 3300003771 Ga0055526_1000405 Ga0055526_10004052 319
29 3300003773 Ga0055537_1004270 Ga0055537_10042703 319
30 3300003784 Ga0055534_1000155 Ga0055534_100015541 319
31 3300003790 Ga0055528_1000093 Ga0055528_100009356 319
32 3300009551 Ga0105238_10016952 Ga0105238_100169523 319
33 3300013306 Ga0163162_10165226 Ga0163162_101652261 319
34 3300025263 Ga0209565_1000014 Ga0209565_1000014241 319
35 3300025273 Ga0209673_1001680 Ga0209673_10016804 319
36 3300025291 Ga0209675_1000021 Ga0209675_1000021247 319
37 3300025295 Ga0209564_1000990 Ga0209564_100099014 319
38 3300025304 Ga0209257_1021543 Ga0209257_10215432 319
39 3300042006 Ga0439432_044954 Ga0439432_044954_383_1360 319
40 3300048919 Ga0496116_0049233 Ga0496116_0049233_675_1652 319
41 3300048920 Ga0496117_0022350 Ga0496117_0022350_2380_3357 319
42 3300048921 Ga0496118_0013983 Ga0496118_0013983_3802_4779 319
43 3300048924 Ga0496121_0129048 Ga0496121_0129048_176_1351 319
44 3300048927 Ga0496124_0000018 Ga0496124_0000018_30859_31845 319
45 3300048927 Ga0496124_0030961 Ga0496124_0030961_706_1683 319
46 3300003781 Ga0055536_1003096 Ga0055536_10030964 320
47 3300003791 Ga0055530_10001288 Ga0055530_1000128813 320
48 3300003794 Ga0055531_10004077 Ga0055531_100040774 320
49 3300005548 Ga0070665_100242514 Ga0070665_1002425142 320
50 3300005844 Ga0068862_100047307 Ga0068862_1000473072 320
51 3300006881 Ga0068865_100014382 Ga0068865_1000143823 320
52 3300025292 Ga0209676_1000079 Ga0209676_1000079115 320
53 3300025292 Ga0209676_1001235 Ga0209676_100123515 320
54 3300025298 Ga0209050_1000153 Ga0209050_100015352 320
55 3300025303 Ga0209051_1000458 Ga0209051_100045832 320
56 3300025304 Ga0209257_1000081 Ga0209257_1000081125 320
57 3300025934 Ga0207686_10013204 Ga0207686_100132043 320
58 3300025938 Ga0207704_10010434 Ga0207704_100104344 320
59 3300028379 Ga0268266_10178820 Ga0268266_101788202 320
60 3300046460 Ga0495638_0017324 Ga0495638_0017324_38_1048 320
61 3300005843 Ga0068860_100020555 Ga0068860_1000205551 321
62 3300026035 Ga0207703_10066133 Ga0207703_100661334 321
63 3300005340 Ga0070689_100012350 Ga0070689_1000123505 322
64 3300025936 Ga0207670_10004948 Ga0207670_100049485 322
65 3300046512 Ga0495610_0003330 Ga0495610_0003330_8589_9575 322
66 3300046518 Ga0495631_0001216 Ga0495631_0001216_13401_14387 322
67 3300013104 Ga0157370_10016488 Ga0157370_100164882 323
68 3300041459 Ga0451800_0164194 Ga0451800_0164194_230_1240 323
69 3300003320 rootH2_10257428 rootH2_102574281 324
70 3300003322 rootL2_10336361 rootL2_103363612 324
71 3300046471 Ga0495650_0001640 Ga0495650_0001640_48_1118 324
72 3300053161 Ga0500634_0000038 Ga0500634_0000038_58288_59295 324
73 iso_pu_bacteria 2895395659 2895398156 324
74 iso_pu_bacteria 2939589442 2939590618 324
75 iso_pu_bacteria 2939611941 2939613865 324
76 iso_pu_bacteria 2974307012 2974309334 324
77 iso_pu_bacteria 2977247770 2977250055 324
78 3300005436 Ga0070713_100000997 Ga0070713_1000009976 325
79 3300025929 Ga0207664_10006775 Ga0207664_100067757 325
80 3300046501 Ga0495607_0052564 Ga0495607_0052564_420_1427 325
81 3300046507 Ga0495606_0003319 Ga0495606_0003319_13386_14393 325
82 3300046512 Ga0495610_0010613 Ga0495610_0010613_4012_5019 325
83 3300046558 Ga0495633_0013234 Ga0495633_0013234_1848_2855 325
84 3300002737 JGI25162J39368_1001347 JGI25162J39368_10013473 326
85 3300003762 Ga0055542_1000475 Ga0055542_10004753 326
86 3300025231 Ga0207427_101273 Ga0207427_1012732 326
87 3300025233 Ga0209437_100364 Ga0209437_1003648 326
88 3300025242 Ga0209258_102175 Ga0209258_1021753 326
89 3300025254 Ga0209148_1000002 Ga0209148_1000002368 326
90 3300046513 Ga0495616_0108937 Ga0495616_0108937_50_1048 326
91 3300046525 Ga0495663_0012370 Ga0495663_0012370_822_1820 326
92 3300046692 Ga0495671_0053622 Ga0495671_0053622_216_1214 326
93 3300002737 JGI25162J39368_1001674 JGI25162J39368_10016744 327
94 3300002741 JGI25157J39369_1001199 JGI25157J39369_10011995 327
95 3300002772 JGI25164J39214_1000619 JGI25164J39214_10006196 327
96 3300003214 JGI25165J46597_1001601 JGI25165J46597_10016014 327
97 3300003791 Ga0055530_10001878 Ga0055530_100018789 327
98 3300009011 Ga0105251_10013305 Ga0105251_100133052 327
99 3300025231 Ga0207427_100240 Ga0207427_1002409 327
100 3300025233 Ga0209437_100527 Ga0209437_1005276 327
101 3300025250 Ga0209026_1000143 Ga0209026_100014363 327
102 3300025256 Ga0209759_1004403 Ga0209759_10044034 327
103 3300025261 Ga0209233_1000112 Ga0209233_1000112188 327
104 3300025298 Ga0209050_1000311 Ga0209050_100031114 327
105 3300048927 Ga0496124_0117426 Ga0496124_0117426_531_1532 327
106 iso_pu_bacteria 2643221559 2643816314 327
107 iso_pu_bacteria 2643221573 2643881614 327
108 iso_pu_bacteria 2643221720 2644662703 327
109 iso_pu_bacteria 2643221728 2644698344 327
110 iso_pu_bacteria 2939622612 2939622792 327
111 3300003781 Ga0055536_1002832 Ga0055536_10028324 328
112 3300003794 Ga0055531_10002542 Ga0055531_100025425 328
113 3300003794 Ga0055531_10003741 Ga0055531_100037414 328
114 3300005344 Ga0070661_100020295 Ga0070661_1000202955 328
115 3300005345 Ga0070692_10030899 Ga0070692_100308992 328
116 3300005435 Ga0070714_100001747 Ga0070714_1000017475 328
117 3300005444 Ga0070694_100066335 Ga0070694_1000663353 328
118 3300005548 Ga0070665_100182486 Ga0070665_1001824862 328
119 3300005614 Ga0068856_100011708 Ga0068856_1000117083 328
120 3300005616 Ga0068852_100308020 Ga0068852_1003080202 328
121 3300009545 Ga0105237_10053107 Ga0105237_100531075 328
122 3300010375 Ga0105239_10034254 Ga0105239_100342543 328
123 3300010375 Ga0105239_10257289 Ga0105239_102572892 328
124 3300013100 Ga0157373_10058083 Ga0157373_100580832 328
125 3300013100 Ga0157373_10147237 Ga0157373_101472372 328
126 3300013102 Ga0157371_10023939 Ga0157371_100239395 328
127 3300013105 Ga0157369_10620036 Ga0157369_106200361 328
128 3300014497 Ga0182008_10004894 Ga0182008_100048943 328
129 3300015261 Ga0182006_1007966 Ga0182006_10079664 328
130 3300015261 Ga0182006_1018542 Ga0182006_10185423 328
131 3300025292 Ga0209676_1001263 Ga0209676_100126319 328
132 3300025299 Ga0209256_1002758 Ga0209256_100275818 328
133 3300025299 Ga0209256_1009634 Ga0209256_10096344 328
134 3300025304 Ga0209257_1001214 Ga0209257_100121414 328
135 3300025304 Ga0209257_1002331 Ga0209257_100233114 328
136 3300025904 Ga0207647_10015689 Ga0207647_100156896 328
137 3300025914 Ga0207671_10187047 Ga0207671_101870472 328
138 3300025919 Ga0207657_10106352 Ga0207657_101063522 328
139 3300025929 Ga0207664_10000102 Ga0207664_1000010232 328
140 3300025932 Ga0207690_10001273 Ga0207690_100012732 328
141 3300025932 Ga0207690_10004492 Ga0207690_100044922 328
142 3300025933 Ga0207706_10064931 Ga0207706_100649312 328
143 3300026041 Ga0207639_10294322 Ga0207639_102943221 328
144 3300038443 Ga0395901_0227938 Ga0395901_0227938_480_1559 328
145 3300046460 Ga0495638_0010707 Ga0495638_0010707_1510_2514 328
146 3300046522 Ga0495643_0034475 Ga0495643_0034475_932_1936 328
147 3300046660 Ga0495625_0000889 Ga0495625_0000889_704_1708 328
148 3300046810 Ga0495660_0008730 Ga0495660_0008730_2489_3496 328
149 3300047320 Ga0495672_0000134 Ga0495672_0000134_90465_91469 328
150 3300047472 Ga0495686_0005094 Ga0495686_0005094_2659_3663 328
151 3300048919 Ga0496116_0062395 Ga0496116_0062395_680_1684 328
152 3300048925 Ga0496122_0087247 Ga0496122_0087247_1071_2075 328
153 3300048926 Ga0496123_0011198 Ga0496123_0011198_5319_6323 328
154 3300048927 Ga0496124_0000255 Ga0496124_0000255_16571_17575 328
155 3300048929 Ga0496126_0109341 Ga0496126_0109341_634_1638 328
156 iso_pu_bacteria 2884411467 2884412818 328
157 3300003794 Ga0055531_10019232 Ga0055531_100192322 329
158 3300005329 Ga0070683_100328693 Ga0070683_1003286932 329
159 3300005458 Ga0070681_10498398 Ga0070681_104983981 329
160 3300005535 Ga0070684_100307486 Ga0070684_1003074861 329
161 3300005564 Ga0070664_100131024 Ga0070664_1001310242 329
162 3300005577 Ga0068857_100089985 Ga0068857_1000899852 329
163 3300009551 Ga0105238_10013888 Ga0105238_100138886 329
164 3300011119 Ga0105246_10027296 Ga0105246_100272962 329
165 3300013104 Ga0157370_10349487 Ga0157370_103494872 329
166 3300013105 Ga0157369_10076503 Ga0157369_100765032 329
167 3300013307 Ga0157372_10159585 Ga0157372_101595851 329
168 3300015261 Ga0182006_1010726 Ga0182006_10107262 329
169 3300015261 Ga0182006_1056017 Ga0182006_10560171 329
170 3300015687 Ga0183368_1002 Ga0183368_10021173 329
171 3300025304 Ga0209257_1000530 Ga0209257_100053024 329
172 3300025903 Ga0207680_10013285 Ga0207680_100132856 329
173 3300025904 Ga0207647_10001738 Ga0207647_1000173811 329
174 3300025919 Ga0207657_10001314 Ga0207657_1000131421 329
175 3300025920 Ga0207649_10012640 Ga0207649_100126402 329
176 3300025929 Ga0207664_10001002 Ga0207664_1000100211 329
177 3300025944 Ga0207661_10153025 Ga0207661_101530252 329
178 3300025945 Ga0207679_10106341 Ga0207679_101063412 329
179 3300026116 Ga0207674_10008210 Ga0207674_100082107 329
180 3300041441 Ga0451787_720730 Ga0451787_720730_107_1117 329
181 3300041460 Ga0451802_0684096 Ga0451802_0684096_116_1123 329
182 3300041509 Ga0451843_0027950 Ga0451843_0027950_626_1633 329
183 3300046460 Ga0495638_0000725 Ga0495638_0000725_3709_4752 329
184 3300046507 Ga0495606_0001602 Ga0495606_0001602_24269_25312 329
185 3300046513 Ga0495616_0038579 Ga0495616_0038579_927_1934 329
186 3300046557 Ga0495622_0005441 Ga0495622_0005441_2237_3280 329
187 3300046694 Ga0495649_0001675 Ga0495649_0001675_1162_2205 329
188 3300048918 Ga0496115_0000550 Ga0496115_0000550_8045_9088 329
189 3300048929 Ga0496126_0008160 Ga0496126_0008160_6422_7459 329
190 3300048929 Ga0496126_0022958 Ga0496126_0022958_1445_2488 329
191 3300049459 Ga0495678_019500 Ga0495678_019500_648_1691 329
192 3300049460 Ga0495682_0005330 Ga0495682_0005330_4275_5318 329
193 iso_pu_bacteria 2842780639 2842781282 329
194 3300006051 Ga0075364_10000156 Ga0075364_1000015623 331
195 3300014497 Ga0182008_10000264 Ga0182008_100002644 331
196 3300046525 Ga0495663_0000926 Ga0495663_0000926_2637_3653 331
197 3300048916 Ga0496113_0041614 Ga0496113_0041614_1699_2715 331
198 3300048920 Ga0496117_0002688 Ga0496117_0002688_8666_9682 331
199 3300048921 Ga0496118_0001865 Ga0496118_0001865_20115_21131 331
200 3300048921 Ga0496118_0008802 Ga0496118_0008802_701_1717 331
201 3300048924 Ga0496121_0004676 Ga0496121_0004676_13674_14690 331
202 3300048925 Ga0496122_0007737 Ga0496122_0007737_2197_3213 331
203 3300048925 Ga0496122_0046635 Ga0496122_0046635_107_1123 331
204 3300048926 Ga0496123_0005398 Ga0496123_0005398_3254_4270 331
205 3300048926 Ga0496123_0021567 Ga0496123_0021567_2557_3573 331
206 3300048927 Ga0496124_0005995 Ga0496124_0005995_12167_13183 331
207 iso_pu_bacteria 2537561836 2538833520 331
208 iso_pu_bacteria 2643221562 2643831848 331
209 iso_pu_bacteria 2895498888 2895499026 331
210 iso_pu_bacteria 2895511927 2895512045 331
211 iso_pu_bacteria 2895522137 2895524869 331
212 iso_pu_bacteria 2895525241 2895527992 331
213 3300014497 Ga0182008_10007460 Ga0182008_100074608 332
214 3300015262 Ga0182007_10005908 Ga0182007_100059083 332
215 3300003794 Ga0055531_10011346 Ga0055531_100113465 333
216 3300005366 Ga0070659_100004358 Ga0070659_1000043583 333
217 3300005539 Ga0068853_100005335 Ga0068853_10000533511 333
218 3300013100 Ga0157373_10012638 Ga0157373_100126382 333
219 3300025298 Ga0209050_1027688 Ga0209050_10276882 333
220 3300025304 Ga0209257_1000150 Ga0209257_100015050 333
221 3300025932 Ga0207690_10001212 Ga0207690_1000121218 333
222 3300026041 Ga0207639_10005742 Ga0207639_100057423 333
223 3300042007 Ga0439449_0012728 Ga0439449_0012728_1130_2149 333
224 3300042015 Ga0439462_0047406 Ga0439462_0047406_25_1047 334
225 3300042435 Ga0439434_0025761 Ga0439434_0025761_675_1697 334
226 3300046453 Ga0495627_002139 Ga0495627_002139_1472_2497 334
227 3300046458 Ga0495591_032073 Ga0495591_032073_119_1144 334
228 3300048920 Ga0496117_0007373 Ga0496117_0007373_2418_3443 334
229 3300048921 Ga0496118_0005640 Ga0496118_0005640_10407_11432 334
230 3300048925 Ga0496122_0029981 Ga0496122_0029981_2114_3148 334
231 3300048926 Ga0496123_0047513 Ga0496123_0047513_1611_2645 334
232 3300048929 Ga0496126_0010350 Ga0496126_0010350_7306_8331 334
233 3300050491 nmdc:mga00v17_27284_c1 nmdc:mga00v17_27284_c1_1946_3043 334
234 3300002067 JGI24735J21928_10017262 JGI24735J21928_100172622 335
235 3300003756 Ga0055533_1002075 Ga0055533_10020753 335
236 3300025226 Ga0209674_100014 Ga0209674_100014292 335
237 3300025242 Ga0209258_101122 Ga0209258_1011223 335
238 3300025904 Ga0207647_10012267 Ga0207647_100122673 335
239 3300048916 Ga0496113_0171281 Ga0496113_0171281_198_1271 335
240 3300048918 Ga0496115_0000208 Ga0496115_0000208_19240_20313 335
241 3300049569 Ga0501032_0171449 Ga0501032_0171449_303_1334 335
242 3300049581 Ga0501047_0235021 Ga0501047_0235021_359_1390 335
243 3300049822 Ga0501035_0046006 Ga0501035_0046006_1429_2460 335
244 3300049823 Ga0501044_0111125 Ga0501044_0111125_1307_2338 335
245 iso_pu_bacteria 2643221579 2643905562 335
246 iso_pu_bacteria 2919675420 2919675588 335
247 3300002705 JGI25156J39149_1007459 JGI25156J39149_10074592 336
248 3300002737 JGI25162J39368_1000548 JGI25162J39368_10005483 336
249 3300002741 JGI25157J39369_1000426 JGI25157J39369_10004263 336
250 3300002771 JGI25163J39215_1000522 JGI25163J39215_100052210 336
251 3300002772 JGI25164J39214_1000235 JGI25164J39214_100023524 336
252 3300003214 JGI25165J46597_1000433 JGI25165J46597_100043311 336
253 3300003320 rootH2_10086979 rootH2_100869792 336
254 3300003761 Ga0055535_1000643 Ga0055535_10006433 336
255 3300003762 Ga0055542_1000668 Ga0055542_10006683 336
256 3300003763 Ga0055529_1000509 Ga0055529_10005096 336
257 3300005344 Ga0070661_100013637 Ga0070661_1000136375 336
258 3300005455 Ga0070663_100117431 Ga0070663_1001174312 336
259 3300006051 Ga0075364_10021048 Ga0075364_100210483 336
260 3300025207 Ga0209760_100308 Ga0209760_1003084 336
261 3300025224 Ga0209784_100139 Ga0209784_10013924 336
262 3300025225 Ga0209566_101584 Ga0209566_1015842 336
263 3300025228 Ga0209672_101047 Ga0209672_10104711 336
264 3300025231 Ga0207427_100084 Ga0207427_10008425 336
265 3300025233 Ga0209437_100037 Ga0209437_10003798 336
266 3300025242 Ga0209258_100034 Ga0209258_100034292 336
267 3300025246 Ga0209646_1001269 Ga0209646_10012694 336
268 3300025250 Ga0209026_1000187 Ga0209026_100018711 336
269 3300025254 Ga0209148_1000001 Ga0209148_1000001412 336
270 3300025256 Ga0209759_1002772 Ga0209759_10027723 336
271 3300025261 Ga0209233_1000002 Ga0209233_10000021819 336
272 3300025272 Ga0209455_1000054 Ga0209455_1000054261 336
273 3300025272 Ga0209455_1002085 Ga0209455_10020854 336
274 3300026067 Ga0207678_10084787 Ga0207678_100847871 336
275 3300048929 Ga0496126_0148802 Ga0496126_0148802_445_1620 336
276 3300050491 nmdc:mga00v17_2351_c1 nmdc:mga00v17_2351_c1_1803_2852 336
277 iso_pu_bacteria 2643221581 2643913301 336
278 iso_pu_bacteria 2739367700 2739733542 336
279 iso_pu_bacteria 2923516293 2923517674 336
280 iso_pu_bacteria 2928963466 2928966836 336
281 3300005289 Ga0065704_10082890 Ga0065704_100828902 338
282 3300003781 Ga0055536_1002103 Ga0055536_100210313 339
283 3300025292 Ga0209676_1000027 Ga0209676_100002778 339
284 2162886007 SwRhRL2b_contig_1866950 SwRhRL2b_0006.00006580 340
285 3300005289 Ga0065704_10070393 Ga0065704_100703938 340
286 3300032004 Ga0307414_10002081 Ga0307414_100020814 340
287 3300048917 Ga0496114_0010341 Ga0496114_0010341_1053_2093 340
288 3300048929 Ga0496126_0089621 Ga0496126_0089621_1001_2041 340
289 3300049571 Ga0501034_0000273 Ga0501034_0000273_996_2030 340
290 iso_pu_bacteria 2919513703 2919516849 340

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01963

TraB_PrgY_gumN

TraB/PrgY/gumN family

79

364

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5u3f-assembly1.cif.gz_B structure of mycobacterium tuberculosis ilve, a branched-chain amino acid transaminase, in complex with d-cycloserine derivative 0.5565 48 88
1lih-assembly1.cif.gz_A three-dimensional structures of the ligand-binding domain of the bacterial aspartate receptor with and without a ligand 0.2909 107 295
8i6o-assembly1.cif.gz_D cryo-em structure of pseudomonas aeruginosa ftse(wt)x/envc complex in peptidisc 0.277 232 315
4hzi-assembly1.cif.gz_A crystal structure of the leptospira interrogans atpase subunit of an orphan abc transporter 0.2698 220 325
1lih-assembly1.cif.gz_A three-dimensional structures of the ligand-binding domain of the bacterial aspartate receptor with and without a ligand 0.2633 107 295
ID Description Score Start End Superfamily
af_Q58695_1_213_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.3823 222 315 3.40.50.300
1vw4801 Mainly Alpha;Orthogonal Bundle;Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A;ACP-like 0.3463 134 194 1.10.1200.10
1musA03 Mainly Alpha;Orthogonal Bundle;Transferase Inhibitor Protein From Tn5; Chain A, domain2;Transferase Inhibitor Protein From Tn5; Chain 0.3368 107 194 1.10.740.10
1e1dA02 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2; 0.3035 132 253 1.20.1270.20
1e1dA02 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2; 0.2991 132 253 1.20.1270.20
ID Description Score Start End GO Terms
AF-A0A5C7SKK3-F1-model_v4 deleted 0.9697 44 340
AF-A0A5C7SKK3-F1-model_v4 deleted 0.9665 44 340
AF-A0A4R5TYD5-F1-model_v4 TraB/GumN family protein 0.9448 21 339
AF-A0A7G6A4E3-F1-model_v4 TraB/GumN family protein 0.9414 41 340
AF-A0A7G6A4E3-F1-model_v4 TraB/GumN family protein 0.9384 41 340

Feature Viewer

pLDDT pTM Quality
79.82 0.77 High
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Predicted Structure (AlphaFold2)

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