F389220

General Info

Members Datasets Scaffolds Average Seq Length
289 186 578 369

Family's Representative Sequence

Representative Sequence 3300024227|Ga0228598_1000232|Ga0228598_10002322
Length 399
Sequence LGSYRFVLHLPRGNGNVLKDLGEHVTKRLIVTLVVMAAILGALGFVKFRQVEAAIAQGASFQMPATAVTTVVAQRETWPSTLTVIGTAAAIQGVTVSADLPGTIDKIHFDSGQQVHEGDILVELDTRQERAQLANMEAQRDLAVINYGRAQELDKAGVIAHSEYDNASAQQKATEAQVGDIKAAIARKTIHAPFTGLLGIRQVSLGQYLAAGQAIVSLQSVDPIYVNFGVPQQNIAEMRPGRVVRITNGDLPGMAFTGRITALDSVINEQTRNIQVQSTLENKANKLRPGMFVQVELPLGQPRQVVPLPASAINYAPYGDSVFIVAQMKDAKGNTYRGVRQQVVKVEGARGDQVAITSGINPGDEVVSSGVFRLRNGAPVQVNNTVKPENNPSPKPEDS

Samples

Sample ID Description Type Environment
1 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
2 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
50 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
81 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
82 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
119 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
121 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
123 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
124 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
127 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
128 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
129 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
130 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
131 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
132 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
133 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
134 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
135 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
136 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
139 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
140 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
141 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
142 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
143 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
144 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
145 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
146 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
147 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
148 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
149 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
150 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
151 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
152 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
153 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
154 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
155 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
156 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
157 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
158 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
159 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
177 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
183 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
184 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
185 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
186 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.31
Metatranscriptomes 0.69
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.42
Rhizosphere 96.54
Stem 0
Stem Tuber 0
Unclassified 12.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0228598_1000232 3300024227 Bacteria 10605
2 Ga0058860_10001211 3300004801 Bacteria 4084
3 Ga0065712_10095319 3300005290 Bacteria 2221
4 Ga0070683_100015184 3300005329 Bacteria 6760
5 Ga0070690_100009064 3300005330 Bacteria 5754
6 Ga0070690_100250554 3300005330 Bacteria 1252
7 Ga0068869_100007154 3300005334 Bacteria 7113
8 Ga0070666_10022673 3300005335 Bacteria 4079
9 Ga0068868_100006359 3300005338 Bacteria 8356
10 Ga0068868_100015730 3300005338 Bacteria 5603
11 Ga0070660_100017357 3300005339 Bacteria 5245
12 Ga0070689_100038609 3300005340 Bacteria 3654
13 Ga0070668_100032409 3300005347 Bacteria 3977
14 Ga0070673_100410927 3300005364 Unclassified 1212
15 Ga0070659_100057798 3300005366 Bacteria 3059
16 Ga0070667_100006893 3300005367 Bacteria 9438
17 Ga0070709_10002371 3300005434 Bacteria 10197
18 Ga0070709_10117291 3300005434 Bacteria 1799
19 Ga0070713_100000132 3300005436 Bacteria 49170
20 Ga0070713_100000257 3300005436 Bacteria 34807
21 Ga0070713_100004954 3300005436 Bacteria 9043
22 Ga0070713_100010735 3300005436 Bacteria 6633
23 Ga0070713_100017867 3300005436 Bacteria 5378
24 Ga0070710_10021947 3300005437 Bacteria 3334
25 Ga0070711_100000295 3300005439 Bacteria 25937
26 Ga0070711_100011975 3300005439 Bacteria 5403
27 Ga0070700_100048927 3300005441 Unclassified 2622
28 Ga0070694_100007253 3300005444 Bacteria 6752
29 Ga0070708_100003935 3300005445 Bacteria 11658
30 Ga0070708_100014221 3300005445 Bacteria 6540
31 Ga0070708_100104953 3300005445 Bacteria 2592
32 Ga0070663_100062411 3300005455 Bacteria 2686
33 Ga0070678_100180634 3300005456 Unclassified 1727
34 Ga0070662_100006563 3300005457 Bacteria 7508
35 Ga0068867_100038555 3300005459 Bacteria 3479
36 Ga0070706_100002033 3300005467 Bacteria 20743
37 Ga0070706_100010789 3300005467 Bacteria 8478
38 Ga0070706_100165787 3300005467 Bacteria 2063
39 Ga0070706_100230256 3300005467 Bacteria 1730
40 Ga0070707_100003522 3300005468 Bacteria 14780
41 Ga0070707_100208145 3300005468 Bacteria 1907
42 Ga0070698_100000985 3300005471 Bacteria 31326
43 Ga0070698_100006646 3300005471 Bacteria 12539
44 Ga0070684_100013637 3300005535 Bacteria 6559
45 Ga0070697_100000045 3300005536 Bacteria 92181
46 Ga0070697_100000079 3300005536 Bacteria 77838
47 Ga0070697_100121958 3300005536 Unclassified 2181
48 Ga0070697_100141415 3300005536 Unclassified 2024
49 Ga0068853_100128585 3300005539 Bacteria 2265
50 Ga0070686_100019562 3300005544 Bacteria 3993
51 Ga0070695_100003046 3300005545 Bacteria 9750
52 Ga0070696_100001252 3300005546 Bacteria 16506
53 Ga0070665_100007437 3300005548 Bacteria 11137
54 Ga0070704_100065705 3300005549 Bacteria 2613
55 Ga0070704_100186713 3300005549 Bacteria 1663
56 Ga0068855_100211197 3300005563 Unclassified 2181
57 Ga0068854_100002082 3300005578 Bacteria 12261
58 Ga0068854_100069633 3300005578 Bacteria 2569
59 Ga0068856_100020368 3300005614 Bacteria 6442
60 Ga0070702_100128671 3300005615 Bacteria 1596
61 Ga0068852_100013670 3300005616 Bacteria 6218
62 Ga0068866_10058611 3300005718 Bacteria 1989
63 Ga0068861_100095914 3300005719 Bacteria 2350
64 Ga0068861_100251242 3300005719 Bacteria 1509
65 Ga0068851_10014691 3300005834 Bacteria 3721
66 Ga0068863_100022674 3300005841 Bacteria 5997
67 Ga0068863_100049333 3300005841 Bacteria 3992
68 Ga0068858_100001848 3300005842 Bacteria 21585
69 Ga0068858_100017750 3300005842 Bacteria 6664
70 Ga0068858_100051345 3300005842 Bacteria 3815
71 Ga0068860_100031007 3300005843 Bacteria 5140
72 Ga0070717_10012211 3300006028 Bacteria 6549
73 Ga0070717_10030945 3300006028 Unclassified 4301
74 Ga0070717_10044780 3300006028 Bacteria 3616
75 Ga0070717_10044800 3300006028 Bacteria 3615
76 Ga0070717_10104095 3300006028 Bacteria 2414
77 Ga0070716_100001171 3300006173 Bacteria 11554
78 Ga0070716_100004275 3300006173 Bacteria 6804
79 Ga0070716_100008035 3300006173 Bacteria 5224
80 Ga0070716_100042770 3300006173 Bacteria 2530
81 Ga0070716_100093692 3300006173 Unclassified 1824
82 Ga0070716_100109352 3300006173 Bacteria 1710
83 Ga0070712_100000047 3300006175 Bacteria 65314
84 Ga0070712_100000082 3300006175 Bacteria 48876
85 Ga0070712_100311213 3300006175 Unclassified 1278
86 Ga0097621_100000867 3300006237 Bacteria 21249
87 Ga0097621_100051675 3300006237 Unclassified 3345
88 Ga0068871_100001599 3300006358 Bacteria 15228
89 Ga0068871_100131371 3300006358 Unclassified 2123
90 Ga0068871_100262150 3300006358 Bacteria 1508
91 Ga0075428_100000209 3300006844 Bacteria 56501
92 Ga0075428_100121401 3300006844 Bacteria 2845
93 Ga0075428_100237911 3300006844 Bacteria 1965
94 Ga0075430_100001180 3300006846 Bacteria 20944
95 Ga0075431_100021727 3300006847 Bacteria 6562
96 Ga0075431_100093159 3300006847 Bacteria 3110
97 Ga0075431_100288722 3300006847 Bacteria 1660
98 Ga0075429_100002980 3300006880 Bacteria 14366
99 Ga0068865_100084883 3300006881 Bacteria 2283
100 Ga0075436_100095808 3300006914 Bacteria 2064
101 Ga0075435_100005713 3300007076 Bacteria 8721
102 Ga0111539_10001437 3300009094 Bacteria 31784
103 Ga0111539_10039012 3300009094 Bacteria 5727
104 Ga0105245_10161341 3300009098 Bacteria 2128
105 Ga0114129_10001881 3300009147 Bacteria 28625
106 Ga0114129_10127981 3300009147 Bacteria 3491
107 Ga0114129_10180398 3300009147 Bacteria 2873
108 Ga0105243_10126644 3300009148 Bacteria 2162
109 Ga0105241_10011651 3300009174 Bacteria 6451
110 Ga0105242_10018793 3300009176 Bacteria 5409
111 Ga0105242_10081265 3300009176 Bacteria 2710
112 Ga0105248_10057183 3300009177 Bacteria 4377
113 Ga0105248_10086555 3300009177 Bacteria 3526
114 Ga0105237_10051209 3300009545 Bacteria 4147
115 Ga0105249_10006245 3300009553 Bacteria 10351
116 Ga0105239_10176155 3300010375 Bacteria 2392
117 Ga0105239_10273518 3300010375 Bacteria 1900
118 Ga0157369_10119808 3300013105 Bacteria 2793
119 Ga0157374_10003717 3300013296 Bacteria 12825
120 Ga0157374_10120507 3300013296 Bacteria 2531
121 Ga0157374_10246042 3300013296 Bacteria 1759
122 Ga0157374_10319025 3300013296 Unclassified 1539
123 Ga0157378_10000086 3300013297 Bacteria 86864
124 Ga0163162_10009089 3300013306 Bacteria 9662
125 Ga0163162_10038064 3300013306 Bacteria 4801
126 Ga0157372_10053847 3300013307 Bacteria 4486
127 Ga0157375_10064934 3300013308 Bacteria 3636
128 Ga0157375_10349948 3300013308 Bacteria 1643
129 Ga0163163_10000759 3300014325 Bacteria 27442
130 Ga0157377_10099132 3300014745 Bacteria 1733
131 Ga0157379_10023665 3300014968 Bacteria 5453
132 Ga0157379_10027865 3300014968 Bacteria 5028
133 Ga0157379_10308195 3300014968 Bacteria 1444
134 Ga0157376_10046331 3300014969 Bacteria 3585
135 Ga0157376_10087151 3300014969 Bacteria 2693
136 Ga0213876_10023672 3300021384 Bacteria 3243
137 Ga0224572_1002617 3300024225 Bacteria 2940
138 Ga0207692_10093484 3300025898 Bacteria 1636
139 Ga0207647_10046943 3300025904 Bacteria 2688
140 Ga0207647_10157246 3300025904 Bacteria 1327
141 Ga0207699_10002498 3300025906 Bacteria 8685
142 Ga0207699_10005844 3300025906 Bacteria 5921
143 Ga0207645_10018255 3300025907 Bacteria 4619
144 Ga0207684_10080612 3300025910 Bacteria 2769
145 Ga0207695_10114363 3300025913 Bacteria 2674
146 Ga0207671_10056849 3300025914 Bacteria 2899
147 Ga0207693_10000162 3300025915 Bacteria 60274
148 Ga0207693_10000537 3300025915 Bacteria 34386
149 Ga0207693_10002955 3300025915 Bacteria 14719
150 Ga0207693_10007141 3300025915 Bacteria 9213
151 Ga0207693_10063338 3300025915 Unclassified 2896
152 Ga0207693_10202841 3300025915 Unclassified 1559
153 Ga0207663_10000279 3300025916 Bacteria 22307
154 Ga0207663_10008973 3300025916 Bacteria 5263
155 Ga0207663_10158076 3300025916 Bacteria 1597
156 Ga0207660_10140588 3300025917 Bacteria 1845
157 Ga0207646_10009550 3300025922 Bacteria 9578
158 Ga0207646_10037914 3300025922 Bacteria 4344
159 Ga0207646_10166274 3300025922 Bacteria 1991
160 Ga0207694_10044146 3300025924 Unclassified 3442
161 Ga0207700_10000443 3300025928 Bacteria 24359
162 Ga0207700_10000811 3300025928 Bacteria 18073
163 Ga0207700_10015856 3300025928 Unclassified 4986
164 Ga0207664_10099774 3300025929 Bacteria 2397
165 Ga0207706_10000964 3300025933 Bacteria 29432
166 Ga0207686_10033674 3300025934 Unclassified 3060
167 Ga0207709_10061785 3300025935 Bacteria 2342
168 Ga0207665_10000955 3300025939 Bacteria 19571
169 Ga0207665_10008063 3300025939 Bacteria 6950
170 Ga0207665_10011252 3300025939 Bacteria 5871
171 Ga0207665_10102889 3300025939 Bacteria 1997
172 Ga0207665_10169334 3300025939 Unclassified 1576
173 Ga0207711_10003672 3300025941 Bacteria 13258
174 Ga0207711_10048857 3300025941 Bacteria 3620
175 Ga0207689_10001423 3300025942 Bacteria 22839
176 Ga0207689_10004641 3300025942 Bacteria 12429
177 Ga0207667_10227135 3300025949 Bacteria 1912
178 Ga0207651_10353558 3300025960 Unclassified 1238
179 Ga0207712_10017804 3300025961 Bacteria 4620
180 Ga0207668_10008477 3300025972 Bacteria 6131
181 Ga0207640_10027177 3300025981 Bacteria 3484
182 Ga0207677_10027637 3300026023 Bacteria 3577
183 Ga0207677_10103552 3300026023 Bacteria 2101
184 Ga0207703_10004655 3300026035 Bacteria 11204
185 Ga0207703_10054707 3300026035 Bacteria 3246
186 Ga0207678_10003063 3300026067 Bacteria 15110
187 Ga0207708_10105892 3300026075 Unclassified 2180
188 Ga0207702_10153013 3300026078 Bacteria 2100
189 Ga0207641_10058759 3300026088 Bacteria 3274
190 Ga0207641_10112668 3300026088 Bacteria 2414
191 Ga0207648_10039464 3300026089 Bacteria 4151
192 Ga0207648_10044890 3300026089 Bacteria 3877
193 Ga0207674_10014500 3300026116 Bacteria 8703
194 Ga0207675_100020506 3300026118 Bacteria 6161
195 Ga0207675_100045276 3300026118 Bacteria 4111
196 Ga0207683_10100508 3300026121 Bacteria 2582
197 Ga0207698_10072761 3300026142 Unclassified 2734
198 Ga0207428_10003591 3300027907 Bacteria 14976
199 Ga0207428_10060918 3300027907 Unclassified 2989
200 Ga0268265_10220577 3300028380 Unclassified 1659
201 Ga0265338_10000762 3300028800 Bacteria 54962
202 Ga0265338_10023768 3300028800 Bacteria 6286
203 Ga0265338_10084706 3300028800 Bacteria 2645
204 Ga0265762_1000379 3300030760 Bacteria 7632
205 Ga0265340_10054680 3300031247 Bacteria 1925
206 Ga0265339_10026327 3300031249 Bacteria 3332
207 Ga0265339_10086478 3300031249 Unclassified 1649
208 Ga0265316_10011307 3300031344 Bacteria 8064
209 Ga0265316_10024694 3300031344 Bacteria 5028
210 Ga0307408_100057948 3300031548 Bacteria 2814
211 Ga0265314_10004432 3300031711 Bacteria 13029
212 Ga0265314_10026794 3300031711 Bacteria 4325
213 Ga0265314_10130550 3300031711 Unclassified 1568
214 Ga0307412_10146966 3300031911 Bacteria 1734
215 Ga0373926_0038576 3300035083 Bacteria 1702
216 Ga0373936_0017803 3300035113 Unclassified 2738
217 Ga0373956_0011937 3300035119 Bacteria 3591
218 Ga0373943_0018787 3300035170 Bacteria 3178
219 Ga0373943_0047183 3300035170 Bacteria 2105
220 Ga0373924_0042326 3300035410 Bacteria 1868
221 Ga0373931_0009015 3300035691 Bacteria 4756
222 Ga0373935_0018847 3300035692 Bacteria 4206
223 Ga0373935_0023356 3300035692 Bacteria 3800
224 Ga0373927_0020286 3300035695 Bacteria 4359
225 Ga0373947_0055040 3300035725 Bacteria 2402
226 Ga0373937_0014938 3300036401 Bacteria 6858
227 Ga0373937_0085783 3300036401 Bacteria 2914
228 Ga0373925_0024851 3300037068 Bacteria 4376
229 Ga0373925_0315214 3300037068 Bacteria 1265
230 Ga0436365_1020976 3300039437 Bacteria 10943
231 Ga0450920_003489 3300042122 Bacteria 2727
232 Ga0439464_0008105 3300042439 Bacteria 2755
233 Ga0466964_0055119 3300044706 Unclassified 1641
234 Ga0495603_0079626 3300046455 Bacteria 1920
235 Ga0495653_0089710 3300046463 Bacteria 2252
236 Ga0495580_0000153 3300046472 Bacteria 50277
237 Ga0495580_0002803 3300046472 Bacteria 14991
238 Ga0495580_0002817 3300046472 Bacteria 14950
239 Ga0495580_0072856 3300046472 Bacteria 2398
240 Ga0495582_0017373 3300046473 Unclassified 3937
241 Ga0495662_0075106 3300046476 Bacteria 1640
242 Ga0495664_0051063 3300046477 Bacteria 2456
243 Ga0495594_0007729 3300046499 Bacteria 5529
244 Ga0495618_0000198 3300046514 Bacteria 43125
245 Ga0495628_0111495 3300046516 Bacteria 2104
246 Ga0495665_0123705 3300046531 Unclassified 1354
247 Ga0495621_0033046 3300046539 Bacteria 1782
248 Ga0495588_0016639 3300046674 Bacteria 3556
249 Ga0495658_0080425 3300046683 Bacteria 1911
250 Ga0495669_0005579 3300046684 Bacteria 5249
251 Ga0495604_0118628 3300047317 Bacteria 1918
252 Ga0495674_0011778 3300047319 Bacteria 8247
253 Ga0495675_0047235 3300047444 Bacteria 2739
254 Ga0496102_0075917 3300048905 Unclassified 3090
255 Ga0496104_0192027 3300048907 Unclassified 1954
256 Ga0496106_0088755 3300048909 Bacteria 2384
257 Ga0496106_0148045 3300048909 Bacteria 1851
258 Ga0496114_0161263 3300048917 Bacteria 1950
259 Ga0496115_0002773 3300048918 Bacteria 12591
260 Ga0496115_0067375 3300048918 Bacteria 2895
261 Ga0501034_0023082 3300049571 Bacteria 6340
262 Ga0501036_0033450 3300049572 Bacteria 4349
263 Ga0501036_0123430 3300049572 Unclassified 2187
264 Ga0501039_0078844 3300049575 Unclassified 2562
265 Ga0501040_0055883 3300049576 Unclassified 2708
266 Ga0501041_0082668 3300049577 Unclassified 1979
267 Ga0501042_0030643 3300049578 Bacteria 3801
268 Ga0501071_0026373 3300049587 Bacteria 4078
269 Ga0501072_0031012 3300049588 Bacteria 4182
270 Ga0501072_0201424 3300049588 Bacteria 1587
271 Ga0501079_0041542 3300049741 Bacteria 3551
272 Ga0501079_0177314 3300049741 Bacteria 1662
273 Ga0501045_0059727 3300049824 Unclassified 2794
274 nmdc:mga05p37_323759_c1 3300050507 Bacteria 1823
275 nmdc:mga05p37_5881_c1 3300050507 Bacteria 14426
276 nmdc:mga09592_82286_c1 3300050508 Bacteria 2743
277 nmdc:mga0qj67_3254_c1 3300050509 Bacteria 11697
278 nmdc:mga0qj67_36213_c1 3300050509 Bacteria 3860
279 nmdc:mga06r32_124451_c1 3300050510 Bacteria 2545
280 nmdc:mga06r32_15745_c1 3300050510 Bacteria 6872
281 nmdc:mga08y16_15873_c1 3300050511 Bacteria 7916
282 nmdc:mga08y16_17209_c1 3300050511 Bacteria 7608
283 nmdc:mga0n895_40804_c1 3300050512 Bacteria 4510
284 nmdc:mga08x19_87460_c1 3300050514 Bacteria 2053
285 Ga0495601_0012385 3300053077 Bacteria 5116
286 Ga0590071_000475 3300059421 Bacteria 11698
287 Ga0590074_000436 3300059423 Bacteria 6034
288 Ga0590075_000979 3300059424 Bacteria 7390
289 Ga0501082_0405188 3300060353 Unclassified 1190
290 Ga0228598_1000232
291 Ga0058860_10001211
292 Ga0065712_10095319
293 Ga0070683_100015184
294 Ga0070690_100009064
295 Ga0070690_100250554
296 Ga0068869_100007154
297 Ga0070666_10022673
298 Ga0068868_100006359
299 Ga0068868_100015730
300 Ga0070660_100017357
301 Ga0070689_100038609
302 Ga0070668_100032409
303 Ga0070673_100410927
304 Ga0070659_100057798
305 Ga0070667_100006893
306 Ga0070709_10002371
307 Ga0070709_10117291
308 Ga0070713_100000132
309 Ga0070713_100000257
310 Ga0070713_100004954
311 Ga0070713_100010735
312 Ga0070713_100017867
313 Ga0070710_10021947
314 Ga0070711_100000295
315 Ga0070711_100011975
316 Ga0070700_100048927
317 Ga0070694_100007253
318 Ga0070708_100003935
319 Ga0070708_100014221
320 Ga0070708_100104953
321 Ga0070663_100062411
322 Ga0070678_100180634
323 Ga0070662_100006563
324 Ga0068867_100038555
325 Ga0070706_100002033
326 Ga0070706_100010789
327 Ga0070706_100165787
328 Ga0070706_100230256
329 Ga0070707_100003522
330 Ga0070707_100208145
331 Ga0070698_100000985
332 Ga0070698_100006646
333 Ga0070684_100013637
334 Ga0070697_100000045
335 Ga0070697_100000079
336 Ga0070697_100121958
337 Ga0070697_100141415
338 Ga0068853_100128585
339 Ga0070686_100019562
340 Ga0070695_100003046
341 Ga0070696_100001252
342 Ga0070665_100007437
343 Ga0070704_100065705
344 Ga0070704_100186713
345 Ga0068855_100211197
346 Ga0068854_100002082
347 Ga0068854_100069633
348 Ga0068856_100020368
349 Ga0070702_100128671
350 Ga0068852_100013670
351 Ga0068866_10058611
352 Ga0068861_100095914
353 Ga0068861_100251242
354 Ga0068851_10014691
355 Ga0068863_100022674
356 Ga0068863_100049333
357 Ga0068858_100001848
358 Ga0068858_100017750
359 Ga0068858_100051345
360 Ga0068860_100031007
361 Ga0070717_10012211
362 Ga0070717_10030945
363 Ga0070717_10044780
364 Ga0070717_10044800
365 Ga0070717_10104095
366 Ga0070716_100001171
367 Ga0070716_100004275
368 Ga0070716_100008035
369 Ga0070716_100042770
370 Ga0070716_100093692
371 Ga0070716_100109352
372 Ga0070712_100000047
373 Ga0070712_100000082
374 Ga0070712_100311213
375 Ga0097621_100000867
376 Ga0097621_100051675
377 Ga0068871_100001599
378 Ga0068871_100131371
379 Ga0068871_100262150
380 Ga0075428_100000209
381 Ga0075428_100121401
382 Ga0075428_100237911
383 Ga0075430_100001180
384 Ga0075431_100021727
385 Ga0075431_100093159
386 Ga0075431_100288722
387 Ga0075429_100002980
388 Ga0068865_100084883
389 Ga0075436_100095808
390 Ga0075435_100005713
391 Ga0111539_10001437
392 Ga0111539_10039012
393 Ga0105245_10161341
394 Ga0114129_10001881
395 Ga0114129_10127981
396 Ga0114129_10180398
397 Ga0105243_10126644
398 Ga0105241_10011651
399 Ga0105242_10018793
400 Ga0105242_10081265
401 Ga0105248_10057183
402 Ga0105248_10086555
403 Ga0105237_10051209
404 Ga0105249_10006245
405 Ga0105239_10176155
406 Ga0105239_10273518
407 Ga0157369_10119808
408 Ga0157374_10003717
409 Ga0157374_10120507
410 Ga0157374_10246042
411 Ga0157374_10319025
412 Ga0157378_10000086
413 Ga0163162_10009089
414 Ga0163162_10038064
415 Ga0157372_10053847
416 Ga0157375_10064934
417 Ga0157375_10349948
418 Ga0163163_10000759
419 Ga0157377_10099132
420 Ga0157379_10023665
421 Ga0157379_10027865
422 Ga0157379_10308195
423 Ga0157376_10046331
424 Ga0157376_10087151
425 Ga0213876_10023672
426 Ga0224572_1002617
427 Ga0207692_10093484
428 Ga0207647_10046943
429 Ga0207647_10157246
430 Ga0207699_10002498
431 Ga0207699_10005844
432 Ga0207645_10018255
433 Ga0207684_10080612
434 Ga0207695_10114363
435 Ga0207671_10056849
436 Ga0207693_10000162
437 Ga0207693_10000537
438 Ga0207693_10002955
439 Ga0207693_10007141
440 Ga0207693_10063338
441 Ga0207693_10202841
442 Ga0207663_10000279
443 Ga0207663_10008973
444 Ga0207663_10158076
445 Ga0207660_10140588
446 Ga0207646_10009550
447 Ga0207646_10037914
448 Ga0207646_10166274
449 Ga0207694_10044146
450 Ga0207700_10000443
451 Ga0207700_10000811
452 Ga0207700_10015856
453 Ga0207664_10099774
454 Ga0207706_10000964
455 Ga0207686_10033674
456 Ga0207709_10061785
457 Ga0207665_10000955
458 Ga0207665_10008063
459 Ga0207665_10011252
460 Ga0207665_10102889
461 Ga0207665_10169334
462 Ga0207711_10003672
463 Ga0207711_10048857
464 Ga0207689_10001423
465 Ga0207689_10004641
466 Ga0207667_10227135
467 Ga0207651_10353558
468 Ga0207712_10017804
469 Ga0207668_10008477
470 Ga0207640_10027177
471 Ga0207677_10027637
472 Ga0207677_10103552
473 Ga0207703_10004655
474 Ga0207703_10054707
475 Ga0207678_10003063
476 Ga0207708_10105892
477 Ga0207702_10153013
478 Ga0207641_10058759
479 Ga0207641_10112668
480 Ga0207648_10039464
481 Ga0207648_10044890
482 Ga0207674_10014500
483 Ga0207675_100020506
484 Ga0207675_100045276
485 Ga0207683_10100508
486 Ga0207698_10072761
487 Ga0207428_10003591
488 Ga0207428_10060918
489 Ga0268265_10220577
490 Ga0265338_10000762
491 Ga0265338_10023768
492 Ga0265338_10084706
493 Ga0265762_1000379
494 Ga0265340_10054680
495 Ga0265339_10026327
496 Ga0265339_10086478
497 Ga0265316_10011307
498 Ga0265316_10024694
499 Ga0307408_100057948
500 Ga0265314_10004432
501 Ga0265314_10026794
502 Ga0265314_10130550
503 Ga0307412_10146966
504 Ga0373926_0038576
505 Ga0373936_0017803
506 Ga0373956_0011937
507 Ga0373943_0018787
508 Ga0373943_0047183
509 Ga0373924_0042326
510 Ga0373931_0009015
511 Ga0373935_0018847
512 Ga0373935_0023356
513 Ga0373927_0020286
514 Ga0373947_0055040
515 Ga0373937_0014938
516 Ga0373937_0085783
517 Ga0373925_0024851
518 Ga0373925_0315214
519 Ga0436365_1020976
520 Ga0450920_003489
521 Ga0439464_0008105
522 Ga0466964_0055119
523 Ga0495603_0079626
524 Ga0495653_0089710
525 Ga0495580_0000153
526 Ga0495580_0002803
527 Ga0495580_0002817
528 Ga0495580_0072856
529 Ga0495582_0017373
530 Ga0495662_0075106
531 Ga0495664_0051063
532 Ga0495594_0007729
533 Ga0495618_0000198
534 Ga0495628_0111495
535 Ga0495665_0123705
536 Ga0495621_0033046
537 Ga0495588_0016639
538 Ga0495658_0080425
539 Ga0495669_0005579
540 Ga0495604_0118628
541 Ga0495674_0011778
542 Ga0495675_0047235
543 Ga0496102_0075917
544 Ga0496104_0192027
545 Ga0496106_0088755
546 Ga0496106_0148045
547 Ga0496114_0161263
548 Ga0496115_0002773
549 Ga0496115_0067375
550 Ga0501034_0023082
551 Ga0501036_0033450
552 Ga0501036_0123430
553 Ga0501039_0078844
554 Ga0501040_0055883
555 Ga0501041_0082668
556 Ga0501042_0030643
557 Ga0501071_0026373
558 Ga0501072_0031012
559 Ga0501072_0201424
560 Ga0501079_0041542
561 Ga0501079_0177314
562 Ga0501045_0059727
563 nmdc:mga05p37_323759_c1
564 nmdc:mga05p37_5881_c1
565 nmdc:mga09592_82286_c1
566 nmdc:mga0qj67_3254_c1
567 nmdc:mga0qj67_36213_c1
568 nmdc:mga06r32_124451_c1
569 nmdc:mga06r32_15745_c1
570 nmdc:mga08y16_15873_c1
571 nmdc:mga08y16_17209_c1
572 nmdc:mga0n895_40804_c1
573 nmdc:mga08x19_87460_c1
574 Ga0495601_0012385
575 Ga0590071_000475
576 Ga0590074_000436
577 Ga0590075_000979
578 Ga0501082_0405188

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

89

139

0.98

PF13437

HlyD_3

HlyD family secretion protein

189

290

0.97

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

81

293

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4k34-assembly3.cif.gz_B crystal structures of cusc review conformational changes accompanying folding and transmembrane channel formation 0.9196 92 153
6sl1-assembly1.cif.gz_A structure of the open conformation of cttel1 0.9161 92 153
2d5d-assembly1.cif.gz_A structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form ii 0.9041 60 183
7wta-assembly1.cif.gz_D cryo-em structure of human pyruvate carboxylase in apo state 0.9003 60 183
7ybu-assembly1.cif.gz_A human propionyl-coenzyme a carboxylase 0.9 60 183
ID Description Score Start End Superfamily
1yc9A01 Mainly Alpha;Up-down Bundle;Outer membrane efflux proteins (OEP);Outer membrane efflux proteins (OEP) 0.9792 94 153 1.20.1600.10
4l8jA03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9698 57 185 2.40.50.100
af_P75830_95_182_6.10.140.1990 Special;Helix non-globular;Helix Hairpins; 0.9674 93 153 6.10.140.1990
3fppA03 Special;Helix non-globular;Helix Hairpins; 0.9501 93 153 6.10.140.1990
af_Q5TKI6_211_365_1.20.1250.10 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;; 0.9496 93 148 1.20.1250.10
ID Description Score Start End GO Terms
AF-A0A838P2G6-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.9683 54 185 GO:0005886
GO:0015562
GO:1990281
AF-A0A3C0HIP4-F1-model_v4 Efflux transporter periplasmic adaptor subunit 0.9164 51 198 GO:0005886
GO:0015562
GO:1990281
AF-A0A4Y3IP66-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.906 37 262 GO:0015562
GO:1990281
AF-A0A157SNJ6-F1-model_v4 HlyD family secretion protein 0.8946 70 259 GO:0015562
GO:1990281
AF-A0A2E5C5H9-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.8755 187 265 GO:0015562
GO:1990281

Map