F388850

General Info

Members Datasets Scaffolds Average Seq Length
288 222 207 385

Family's Representative Sequence

Representative Sequence 3300049582|Ga0501048_0000282|Ga0501048_0000282_6246_7568
Length 440
Sequence VDENHDRPISSGPRQKHTGAAFSFFTVAGVPAVNFDRLKGTLIMAVATAPSQANAASSQRAGPRTAAPQTGFAPWKNPALPPMVRFEGITKRFDDFVAVNNVTLDIYEKEFFALLGPSGCGKSTLLRMLAGFERPTEGRIIVAGQDITDMPPYERPVNMMFQSYALFPHMTVERNIGFGLKQEGMPKDKIEERVDEAMGMLELRQFAKRKPNQLSGGQQQRVALARAIAKKPRLVLLDEPLGALDKKLRQQAQFELMRIQETTGTTFIIVTHDQEEAMTVASRIAVMEKGLLQQVATPGDIYENPKTRYIAGFIGDVNVFEGTVSNVSDGCVEIDAADGYKFKTRSAEPVTVGQKVGLALRPEKIRIGREKPASDVNAIPGKVEDIGYLGSISHYHVRTASGERITALRANAAHTVEQSITWEDGVWLDWPVDAGVVLTG

Samples

Sample ID Description Type Environment
1 2010549000 Rice roots microbial communities from plants at IRRI, Los Banos, Philippines - endophytes Metagenome Endosphere
2 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
3 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
4 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
5 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
6 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
7 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
8 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
9 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
10 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
11 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
12 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
13 2643221558 Rhizobium sp. Root149 Isolate Unclassified
14 2643221568 Rhizobium sp. Root564 Isolate Unclassified
15 2643221582 Rhizobium sp. Root651 Isolate Unclassified
16 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
17 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
18 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
19 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
20 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
21 2643221693 Rhizobium sp. Root491 Isolate Unclassified
22 2643221719 Rhizobium sp. Root274 Isolate Unclassified
23 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
24 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
25 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
26 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
27 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
28 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
29 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
30 2836160341 Unclassified Planctomycetes Bin 134 Isolate Unclassified
31 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
32 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
33 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
34 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
35 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
36 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
37 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
38 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
39 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
40 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
41 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
42 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
43 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
44 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
45 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
46 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
47 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
48 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
49 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
50 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
51 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
52 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
53 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
54 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
55 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
56 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
57 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
58 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
59 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
60 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
61 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
62 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
63 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
64 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
65 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
66 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
67 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
68 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
69 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
70 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
71 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
72 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
73 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
74 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
75 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
76 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
77 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
78 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
79 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
80 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
81 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
82 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
83 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
84 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
85 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
86 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
87 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
88 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
89 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
90 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
91 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
92 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
93 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
94 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
95 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
96 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
97 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
98 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
99 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
100 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
101 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
102 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
103 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
104 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
105 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
106 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
107 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
108 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
109 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
110 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
111 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
112 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
113 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
114 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
115 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
116 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
117 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
118 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
119 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
120 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
121 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
122 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
123 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
124 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
125 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
126 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
141 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
142 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
143 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
147 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
148 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
149 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
150 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
151 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
152 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
153 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
154 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
155 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
156 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
157 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
158 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
159 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
160 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
161 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
162 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
163 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
167 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
168 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
169 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
170 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
173 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
174 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
175 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
176 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
177 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
178 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
179 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
188 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
189 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
190 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
191 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
192 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
194 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
195 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
196 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
197 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
198 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
199 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
200 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
201 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
202 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
203 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
204 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
205 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
206 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
207 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
208 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
209 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
210 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
211 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
212 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
213 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
214 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
215 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
216 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
217 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
218 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
219 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
220 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
221 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
222 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.88
Metatranscriptomes 0
Isolates 28.12

Biome Distribution

Category Percentage (%)
Aerial Root 1.74
Bulb 0
Endosphere 18.75
Nodule 9.38
Rhizoplane 3.82
Rhizosphere 40.62
Stem 0
Stem Tuber 0
Unclassified 25.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 RicEn_C2617 2010549000 Bacteria 1462
2 JGI25153J46596_10022881 3300003215 Bacteria 2292
3 Ga0055536_1003136 3300003781 Bacteria 8976
4 Ga0055530_10001672 3300003791 Bacteria 15737
5 Ga0055540_1002341 3300003792 Bacteria 10137
6 Ga0055531_10002423 3300003794 Bacteria 12481
7 Ga0055531_10002831 3300003794 Bacteria 11352
8 Ga0058692_1004160 3300003856 Bacteria 4334
9 Ga0065165_1000567 3300005262 Bacteria 54897
10 Ga0065165_1003754 3300005262 Bacteria 10207
11 Ga0070670_100122136 3300005331 Bacteria 2246
12 Ga0070680_100036295 3300005336 Bacteria 3982
13 Ga0070668_100014191 3300005347 Bacteria 5952
14 Ga0070669_100064494 3300005353 Bacteria 2698
15 Ga0070667_100097788 3300005367 Bacteria 2532
16 Ga0070681_10006028 3300005458 Bacteria 11744
17 Ga0070679_100014502 3300005530 Bacteria 7570
18 Ga0070697_100071973 3300005536 Bacteria 2836
19 Ga0068853_100015631 3300005539 Bacteria 6235
20 Ga0070665_100004421 3300005548 Bacteria 14769
21 Ga0070665_100026572 3300005548 Bacteria 5829
22 Ga0070665_100027687 3300005548 Bacteria 5707
23 Ga0068857_100062584 3300005577 Bacteria 3308
24 Ga0068859_100021694 3300005617 Bacteria 6445
25 Ga0068864_100025900 3300005618 Bacteria 4943
26 Ga0068861_100032017 3300005719 Bacteria 3869
27 Ga0068860_100000083 3300005843 Bacteria 168189
28 Ga0068860_100007935 3300005843 Bacteria 10591
29 Ga0068862_100026846 3300005844 Bacteria 4843
30 Ga0068862_100095260 3300005844 Bacteria 2596
31 Ga0075364_10030272 3300006051 Bacteria 3474
32 Ga0075364_10040374 3300006051 Bacteria 3026
33 Ga0075362_10007527 3300006177 Bacteria 4128
34 Ga0075367_10002714 3300006178 Bacteria 8171
35 Ga0075367_10063261 3300006178 Bacteria 2211
36 Ga0075369_10062565 3300006186 Bacteria 1626
37 Ga0075366_10005906 3300006195 Bacteria 6657
38 Ga0075434_100155549 3300006871 Bacteria 2306
39 Ga0075434_100231158 3300006871 Bacteria 1869
40 Ga0075436_100019558 3300006914 Bacteria 4640
41 Ga0097620_100021695 3300006931 Bacteria 6445
42 Ga0079104_1000069 3300006946 Bacteria 153993
43 Ga0099826_10000423 3300006948 Bacteria 20100
44 Ga0099826_10006813 3300006948 Bacteria 8363
45 Ga0105243_10030835 3300009148 Bacteria 4131
46 Ga0105237_10041352 3300009545 Bacteria 4649
47 Ga0105249_10159357 3300009553 Bacteria 2179
48 Ga0105246_10035227 3300011119 Bacteria 3344
49 Ga0157373_10001801 3300013100 Bacteria 16297
50 Ga0157371_10000058 3300013102 Bacteria 171756
51 Ga0157371_10050550 3300013102 Bacteria 2954
52 Ga0157370_10000792 3300013104 Bacteria 39754
53 Ga0157369_10029085 3300013105 Bacteria 6109
54 Ga0157372_10354679 3300013307 Bacteria 1709
55 Ga0157375_10093593 3300013308 Bacteria 3071
56 Ga0157380_10069494 3300014326 Bacteria 2842
57 Ga0157379_10046850 3300014968 Bacteria 3858
58 Ga0157376_10038693 3300014969 Bacteria 3882
59 Ga0209026_1002289 3300025250 Bacteria 7314
60 Ga0209130_1009142 3300025284 Bacteria 2854
61 Ga0209025_1000441 3300025294 Bacteria 81951
62 Ga0209025_1044368 3300025294 Bacteria 1859
63 Ga0209758_1000349 3300025297 Bacteria 84164
64 Ga0209758_1002293 3300025297 Bacteria 19791
65 Ga0209758_1017031 3300025297 Bacteria 3649
66 Ga0209050_1000161 3300025298 Bacteria 155713
67 Ga0209050_1003851 3300025298 Bacteria 10683
68 Ga0209257_1000252 3300025304 Bacteria 123718
69 Ga0209257_1000552 3300025304 Bacteria 64315
70 Ga0209257_1001428 3300025304 Bacteria 28367
71 Ga0209257_1002432 3300025304 Bacteria 18537
72 Ga0207707_10300436 3300025912 Bacteria 1388
73 Ga0207657_10212684 3300025919 Bacteria 1551
74 Ga0207652_10032547 3300025921 Bacteria 4385
75 Ga0207681_10057682 3300025923 Bacteria 2655
76 Ga0207681_10151153 3300025923 Bacteria 1740
77 Ga0207650_10158952 3300025925 Bacteria 1789
78 Ga0207664_10292168 3300025929 Bacteria 1432
79 Ga0207709_10158746 3300025935 Bacteria 1575
80 Ga0207668_10032101 3300025972 Bacteria 3466
81 Ga0207658_10058230 3300025986 Bacteria 2874
82 Ga0207658_10224232 3300025986 Bacteria 1583
83 Ga0207678_10000100 3300026067 Bacteria 70537
84 Ga0207674_10036110 3300026116 Bacteria 5154
85 Ga0207675_100031839 3300026118 Bacteria 4913
86 Ga0209281_1000192 3300027111 Bacteria 140252
87 Ga0209371_1000009 3300027312 Bacteria 963030
88 Ga0209371_1000547 3300027312 Bacteria 35249
89 Ga0209282_1000224 3300027666 Bacteria 29523
90 Ga0209282_1003866 3300027666 Bacteria 8997
91 Ga0268266_10006291 3300028379 Bacteria 10886
92 Ga0268266_10028097 3300028379 Bacteria 4783
93 Ga0268266_10057845 3300028379 Bacteria 3337
94 Ga0268265_10002598 3300028380 Bacteria 13459
95 Ga0268265_10040669 3300028380 Bacteria 3435
96 Ga0268265_10053210 3300028380 Bacteria 3066
97 Ga0268265_10157268 3300028380 Bacteria 1925
98 Ga0268264_10000055 3300028381 Bacteria 314947
99 Ga0268264_10034123 3300028381 Bacteria 4184
100 Ga0268264_10041098 3300028381 Bacteria 3823
101 Ga0307517_10068083 3300028786 Bacteria 3248
102 Ga0307515_10000121 3300028794 Bacteria 188657
103 Ga0268256_1000010 3300030500 Bacteria 963034
104 Ga0268256_1014402 3300030500 Bacteria 2348
105 Ga0307511_10036017 3300030521 Bacteria 4307
106 Ga0265327_10000447 3300031251 Bacteria 74605
107 Ga0307513_10016341 3300031456 Bacteria 8958
108 Ga0307410_10265184 3300031852 Bacteria 1341
109 Ga0395900_0133282 3300037418 Bacteria 2546
110 Ga0395905_0009097 3300037471 Bacteria 9734
111 Ga0395905_0010526 3300037471 Bacteria 8985
112 Ga0395905_0033945 3300037471 Bacteria 4791
113 Ga0400483_064222 3300039062 Bacteria 4689
114 Ga0466960_0138394 3300044901 Bacteria 1291
115 Ga0451576_0079875 3300045051 Bacteria 3404
116 Ga0466967_0221351 3300045976 Bacteria 1799
117 Ga0495638_0031028 3300046460 Bacteria 3436
118 Ga0495638_0116851 3300046460 Bacteria 1579
119 Ga0495638_0155399 3300046460 Bacteria 1324
120 Ga0495607_0069515 3300046501 Bacteria 1971
121 Ga0495588_0007526 3300046674 Bacteria 4960
122 Ga0495686_0007733 3300047472 Bacteria 8013
123 Ga0496102_0007685 3300048905 Bacteria 9209
124 Ga0496104_0057690 3300048907 Bacteria 3674
125 Ga0496105_0153370 3300048908 Bacteria 1893
126 Ga0496111_0000317 3300048914 Bacteria 23872
127 Ga0496113_0065134 3300048916 Bacteria 2757
128 Ga0496116_0000080 3300048919 Bacteria 224530
129 Ga0496116_0018419 3300048919 Bacteria 5385
130 Ga0496116_0068672 3300048919 Bacteria 2257
131 Ga0496117_0000002 3300048920 Bacteria 2483758
132 Ga0496117_0085119 3300048920 Bacteria 2060
133 Ga0496118_0000233 3300048921 Bacteria 97731
134 Ga0496118_0087616 3300048921 Bacteria 2158
135 Ga0496119_0001089 3300048922 Bacteria 34251
136 Ga0496119_0070460 3300048922 Bacteria 2050
137 Ga0496120_0000021 3300048923 Bacteria 250966
138 Ga0496120_0055234 3300048923 Bacteria 2246
139 Ga0496121_0000001 3300048924 Bacteria 1830318
140 Ga0496121_0000581 3300048924 Bacteria 68614
141 Ga0496121_0161281 3300048924 Bacteria 1639
142 Ga0496122_0000001 3300048925 Bacteria 1827766
143 Ga0496122_0000009 3300048925 Bacteria 584024
144 Ga0496122_0002105 3300048925 Bacteria 29496
145 Ga0496122_0029836 3300048925 Bacteria 4587
146 Ga0496122_0033520 3300048925 Bacteria 4222
147 Ga0496123_0000001 3300048926 Bacteria 1831497
148 Ga0496123_0000020 3300048926 Bacteria 388748
149 Ga0496123_0002010 3300048926 Bacteria 26259
150 Ga0496123_0123248 3300048926 Bacteria 1452
151 Ga0496123_0141823 3300048926 Bacteria 1312
152 Ga0496124_0015389 3300048927 Bacteria 7332
153 Ga0496124_0027813 3300048927 Bacteria 5067
154 Ga0496124_0043957 3300048927 Bacteria 3837
155 Ga0496124_0148923 3300048927 Bacteria 1839
156 Ga0496124_0295375 3300048927 Bacteria 1173
157 Ga0496125_0000001 3300048928 Bacteria 1766138
158 Ga0496125_0021027 3300048928 Bacteria 6100
159 Ga0496126_0000094 3300048929 Bacteria 208184
160 Ga0501032_0028404 3300049569 Bacteria 3844
161 Ga0501034_0000077 3300049571 Bacteria 173873
162 Ga0501034_0287605 3300049571 Bacteria 1583
163 Ga0501037_0019672 3300049573 Bacteria 4981
164 Ga0501039_0000131 3300049575 Bacteria 52205
165 Ga0501040_0245703 3300049576 Bacteria 1276
166 Ga0501046_0001156 3300049580 Bacteria 25669
167 Ga0501046_0004239 3300049580 Bacteria 13051
168 Ga0501047_0000129 3300049581 Bacteria 91572
169 Ga0501047_0038186 3300049581 Bacteria 4645
170 Ga0501047_0095262 3300049581 Bacteria 2856
171 Ga0501048_0000282 3300049582 Bacteria 34461
172 Ga0501067_0000213 3300049583 Bacteria 32191
173 Ga0501070_0209011 3300049586 Bacteria 1602
174 Ga0501073_0011311 3300049589 Bacteria 6530
175 Ga0501080_0000053 3300049742 Bacteria 74409
176 Ga0501280_005659 3300049776 Bacteria 1781
177 Ga0501035_0000010 3300049822 Bacteria 309349
178 Ga0501044_0000006 3300049823 Bacteria 291413
179 Ga0501044_0032199 3300049823 Bacteria 5513
180 Ga0501044_0211026 3300049823 Bacteria 1896
181 nmdc:mga03683_14306_c1 3300050489 Bacteria 2934
182 nmdc:mga03n38_11050_c1 3300050490 Bacteria 3349
183 nmdc:mga00v17_3192_c1 3300050491 Bacteria 8448
184 nmdc:mga00v17_72_c1 3300050491 Bacteria 60922
185 nmdc:mga00v17_86425_c1 3300050491 Bacteria 1965
186 nmdc:mga0yw44_12243_c1 3300050492 Bacteria 4464
187 nmdc:mga0yw44_1338_c1 3300050492 Bacteria 7798
188 nmdc:mga06z11_6468_c1 3300050494 Bacteria 4772
189 nmdc:mga0sz30_53814_c1 3300050516 Bacteria 1711
190 nmdc:mga0sz30_609_c1 3300050516 Bacteria 13266
191 Ga0500644_0002257 3300053088 Bacteria 4858
192 Ga0500641_0003000 3300053096 Bacteria 5976
193 Ga0500556_0000033 3300053104 Bacteria 147801
194 Ga0500593_000219 3300053117 Bacteria 23614
195 Ga0500608_042303 3300053122 Bacteria 2187
196 Ga0500618_000151 3300053125 Bacteria 57092
197 Ga0500561_0000123 3300053137 Bacteria 14866
198 Ga0500568_0000002 3300053139 Bacteria 880601
199 Ga0500573_0007042 3300053140 Bacteria 6113
200 Ga0500616_0000443 3300053153 Bacteria 54427
201 Ga0500622_0005723 3300053156 Bacteria 7386
202 Ga0500624_000320 3300053157 Bacteria 16425
203 Ga0500627_0131213 3300053158 Bacteria 1132
204 Ga0500636_0000010 3300053177 Bacteria 145932
205 Ga0500636_0006532 3300053177 Bacteria 6697
206 Ga0500645_001788 3300053730 Bacteria 10339
207 Ga0501082_0013933 3300060353 Bacteria 6915

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053158 Ga0500627_0131213 Ga0500627_0131213_172_1122 315
2 3300003792 Ga0055540_1002341 Ga0055540_10023419 319
3 3300050492 nmdc:mga0yw44_1338_c1 nmdc:mga0yw44_1338_c1_29_991 320
4 3300028786 Ga0307517_10068083 Ga0307517_100680833 329
5 3300025986 Ga0207658_10224232 Ga0207658_102242322 340
6 iso_pu_bacteria 2836160341 2836163585 348
7 3300048926 Ga0496123_0141823 Ga0496123_0141823_53_1126 357
8 3300048927 Ga0496124_0295375 Ga0496124_0295375_64_1137 357
9 3300039062 Ga0400483_064222 Ga0400483_064222_489_1604 368
10 3300046460 Ga0495638_0116851 Ga0495638_0116851_123_1232 368
11 iso_pu_bacteria 2840878972 2840881729 369
12 3300053125 Ga0500618_000151 Ga0500618_000151_10975_12087 370
13 3300003215 JGI25153J46596_10022881 JGI25153J46596_100228812 373
14 3300003791 Ga0055530_10001672 Ga0055530_100016729 373
15 3300003794 Ga0055531_10002831 Ga0055531_100028317 373
16 3300005262 Ga0065165_1000567 Ga0065165_100056715 373
17 3300006871 Ga0075434_100231158 Ga0075434_1002311582 373
18 3300006914 Ga0075436_100019558 Ga0075436_1000195582 373
19 3300025250 Ga0209026_1002289 Ga0209026_10022898 373
20 3300025297 Ga0209758_1002293 Ga0209758_100229312 373
21 3300025298 Ga0209050_1000161 Ga0209050_100016142 373
22 3300025304 Ga0209257_1000252 Ga0209257_1000252106 373
23 3300025304 Ga0209257_1000552 Ga0209257_100055234 373
24 3300025304 Ga0209257_1001428 Ga0209257_10014284 373
25 3300025929 Ga0207664_10292168 Ga0207664_102921682 373
26 3300030521 Ga0307511_10036017 Ga0307511_100360175 373
27 3300045976 Ga0466967_0221351 Ga0466967_0221351_514_1638 373
28 3300047472 Ga0495686_0007733 Ga0495686_0007733_349_1500 373
29 3300053730 Ga0500645_001788 Ga0500645_001788_7836_9011 373
30 iso_pu_bacteria 8005658619 8005660394 375
31 iso_pu_bacteria 8055431914 8055433416 376
32 3300053122 Ga0500608_042303 Ga0500608_042303_102_1244 377
33 3300053096 Ga0500641_0003000 Ga0500641_0003000_1955_3103 378
34 iso_pu_bacteria 2558860983 2561466893 378
35 3300005331 Ga0070670_100122136 Ga0070670_1001221362 379
36 3300005336 Ga0070680_100036295 Ga0070680_1000362952 379
37 3300005347 Ga0070668_100014191 Ga0070668_1000141914 379
38 3300005367 Ga0070667_100097788 Ga0070667_1000977882 379
39 3300005458 Ga0070681_10006028 Ga0070681_100060287 379
40 3300005530 Ga0070679_100014502 Ga0070679_1000145024 379
41 3300005539 Ga0068853_100015631 Ga0068853_1000156313 379
42 3300005577 Ga0068857_100062584 Ga0068857_1000625842 379
43 3300005617 Ga0068859_100021694 Ga0068859_1000216942 379
44 3300005618 Ga0068864_100025900 Ga0068864_1000259002 379
45 3300005719 Ga0068861_100032017 Ga0068861_1000320174 379
46 3300005843 Ga0068860_100000083 Ga0068860_100000083140 379
47 3300005843 Ga0068860_100007935 Ga0068860_1000079352 379
48 3300005844 Ga0068862_100026846 Ga0068862_1000268467 379
49 3300005844 Ga0068862_100095260 Ga0068862_1000952602 379
50 3300006178 Ga0075367_10063261 Ga0075367_100632612 379
51 3300006871 Ga0075434_100155549 Ga0075434_1001555492 379
52 3300006931 Ga0097620_100021695 Ga0097620_1000216955 379
53 3300009545 Ga0105237_10041352 Ga0105237_100413525 379
54 3300009553 Ga0105249_10159357 Ga0105249_101593572 379
55 3300011119 Ga0105246_10035227 Ga0105246_100352273 379
56 3300013308 Ga0157375_10093593 Ga0157375_100935933 379
57 3300014326 Ga0157380_10069494 Ga0157380_100694942 379
58 3300014968 Ga0157379_10046850 Ga0157379_100468503 379
59 3300014969 Ga0157376_10038693 Ga0157376_100386933 379
60 3300025912 Ga0207707_10300436 Ga0207707_103004362 379
61 3300025919 Ga0207657_10212684 Ga0207657_102126842 379
62 3300025921 Ga0207652_10032547 Ga0207652_100325472 379
63 3300025923 Ga0207681_10151153 Ga0207681_101511532 379
64 3300025925 Ga0207650_10158952 Ga0207650_101589522 379
65 3300025972 Ga0207668_10032101 Ga0207668_100321014 379
66 3300025986 Ga0207658_10058230 Ga0207658_100582303 379
67 3300026067 Ga0207678_10000100 Ga0207678_1000010010 379
68 3300026116 Ga0207674_10036110 Ga0207674_100361103 379
69 3300026118 Ga0207675_100031839 Ga0207675_1000318395 379
70 3300028380 Ga0268265_10002598 Ga0268265_1000259810 379
71 3300028380 Ga0268265_10040669 Ga0268265_100406694 379
72 3300028380 Ga0268265_10053210 Ga0268265_100532102 379
73 3300028381 Ga0268264_10000055 Ga0268264_10000055273 379
74 3300028381 Ga0268264_10034123 Ga0268264_100341232 379
75 3300028381 Ga0268264_10041098 Ga0268264_100410983 379
76 3300031456 Ga0307513_10016341 Ga0307513_100163416 379
77 3300046460 Ga0495638_0155399 Ga0495638_0155399_39_1235 379
78 3300048905 Ga0496102_0007685 Ga0496102_0007685_5812_7011 379
79 3300048908 Ga0496105_0153370 Ga0496105_0153370_602_1801 379
80 3300049569 Ga0501032_0028404 Ga0501032_0028404_770_1951 379
81 3300049571 Ga0501034_0000077 Ga0501034_0000077_40816_41997 379
82 3300049571 Ga0501034_0287605 Ga0501034_0287605_200_1393 379
83 3300049573 Ga0501037_0019672 Ga0501037_0019672_2670_3851 379
84 3300049575 Ga0501039_0000131 Ga0501039_0000131_731_1912 379
85 3300049576 Ga0501040_0245703 Ga0501040_0245703_38_1240 379
86 3300049580 Ga0501046_0001156 Ga0501046_0001156_3380_4561 379
87 3300049580 Ga0501046_0004239 Ga0501046_0004239_580_1836 379
88 3300049581 Ga0501047_0000129 Ga0501047_0000129_80457_81638 379
89 3300049581 Ga0501047_0038186 Ga0501047_0038186_518_1720 379
90 3300049581 Ga0501047_0095262 Ga0501047_0095262_1345_2601 379
91 3300049582 Ga0501048_0000282 Ga0501048_0000282_6246_7568 379
92 3300049583 Ga0501067_0000213 Ga0501067_0000213_26027_27208 379
93 3300049586 Ga0501070_0209011 Ga0501070_0209011_215_1396 379
94 3300049589 Ga0501073_0011311 Ga0501073_0011311_3425_4606 379
95 3300049742 Ga0501080_0000053 Ga0501080_0000053_3858_5039 379
96 3300049822 Ga0501035_0000010 Ga0501035_0000010_177136_178317 379
97 3300049823 Ga0501044_0000006 Ga0501044_0000006_34917_36098 379
98 3300049823 Ga0501044_0032199 Ga0501044_0032199_1011_2267 379
99 3300050491 nmdc:mga00v17_86425_c1 nmdc:mga00v17_86425_c1_689_1840 379
100 3300060353 Ga0501082_0013933 Ga0501082_0013933_857_2038 379
101 iso_pu_bacteria 2643221598 2644001282 379
102 iso_pu_bacteria 2643221614 2644086000 379
103 iso_pu_bacteria 2643221661 2644345333 379
104 iso_pu_bacteria 2643221666 2644369607 379
105 3300005536 Ga0070697_100071973 Ga0070697_1000719732 380
106 3300025284 Ga0209130_1009142 Ga0209130_10091421 380
107 3300028380 Ga0268265_10157268 Ga0268265_101572682 380
108 3300028794 Ga0307515_10000121 Ga0307515_10000121161 380
109 3300037471 Ga0395905_0010526 Ga0395905_0010526_3294_4466 380
110 3300045051 Ga0451576_0079875 Ga0451576_0079875_963_2117 380
111 3300048922 Ga0496119_0001089 Ga0496119_0001089_5542_6714 380
112 3300048925 Ga0496122_0002105 Ga0496122_0002105_21262_22434 380
113 3300048926 Ga0496123_0002010 Ga0496123_0002010_6743_7915 380
114 3300049823 Ga0501044_0211026 Ga0501044_0211026_239_1381 380
115 3300053104 Ga0500556_0000033 Ga0500556_0000033_99025_100197 380
116 3300053117 Ga0500593_000219 Ga0500593_000219_17280_18443 380
117 3300053139 Ga0500568_0000002 Ga0500568_0000002_510531_511694 380
118 iso_pu_bacteria 2510461069 2510839827 380
119 iso_pu_bacteria 2513237087 2513591480 380
120 iso_pu_bacteria 2643221653 2644297633 380
121 iso_pu_bacteria 2643221719 2644655886 380
122 iso_pu_bacteria 2738541317 2738948222 380
123 iso_pu_bacteria 2775507049 2776912089 380
124 iso_pu_bacteria 2818991272 2819243291 380
125 iso_pu_bacteria 2899803654 2899805269 380
126 iso_pu_bacteria 2913308742 2913313437 380
127 iso_pu_bacteria 2989776772 2989777425 380
128 iso_pu_bacteria 8005246636 8005247384 380
129 iso_pu_bacteria 2537561587 2537872804 381
130 iso_pu_bacteria 2554235003 2554246641 381
131 iso_pu_bacteria 2558860242 2559293869 381
132 iso_pu_bacteria 2599185210 2599605418 381
133 iso_pu_bacteria 2599185236 2599719552 381
134 iso_pu_bacteria 2600254933 2600374698 381
135 iso_pu_bacteria 2600255279 2601609158 381
136 iso_pu_bacteria 2600255308 2601745933 381
137 iso_pu_bacteria 2643221568 2643856338 381
138 iso_pu_bacteria 2643221582 2643921143 381
139 iso_pu_bacteria 2643221693 2644519217 381
140 iso_pu_bacteria 2808606387 2808986355 381
141 iso_pu_bacteria 2818991439 2819556486 381
142 iso_pu_bacteria 2821123053 2821123636 381
143 iso_pu_bacteria 2838675328 2838677215 381
144 iso_pu_bacteria 2838714209 2838716103 381
145 iso_pu_bacteria 2838719591 2838720097 381
146 iso_pu_bacteria 2838724970 2838726855 381
147 iso_pu_bacteria 2838736955 2838739330 381
148 iso_pu_bacteria 2841840854 2841843228 381
149 iso_pu_bacteria 2841846520 2841847030 381
150 iso_pu_bacteria 2841859092 2841860440 381
151 iso_pu_bacteria 2842124991 2842126941 381
152 iso_pu_bacteria 2842130223 2842132108 381
153 iso_pu_bacteria 2842140634 2842143010 381
154 iso_pu_bacteria 2842152218 2842152723 381
155 iso_pu_bacteria 2842170452 2842172348 381
156 iso_pu_bacteria 2842175837 2842176342 381
157 iso_pu_bacteria 2842187318 2842189210 381
158 iso_pu_bacteria 2842211629 2842213524 381
159 iso_pu_bacteria 2842224351 2842224858 381
160 iso_pu_bacteria 2842515876 2842517225 381
161 iso_pu_bacteria 2854896431 2854898264 381
162 iso_pu_bacteria 2854916844 2854920038 381
163 iso_pu_bacteria 2857531043 2857531200 381
164 iso_pu_bacteria 2899792073 2899792506 381
165 iso_pu_bacteria 2899845264 2899847904 381
166 iso_pu_bacteria 2919114240 2919116306 381
167 iso_pu_bacteria 2919166419 2919166895 381
168 iso_pu_bacteria 2919171160 2919172089 381
169 iso_pu_bacteria 2926754445 2926757260 381
170 iso_pu_bacteria 2926760298 2926761475 381
171 iso_pu_bacteria 2929138655 2929138987 381
172 iso_pu_bacteria 2933006813 2933007368 381
173 iso_pu_bacteria 2933011516 2933012132 381
174 iso_pu_bacteria 2933594066 2933594576 381
175 iso_pu_bacteria 2978969890 2978973312 381
176 iso_pu_bacteria 2979089926 2979093237 381
177 iso_pu_bacteria 2979095461 2979099378 381
178 iso_pu_bacteria 2979100975 2979105208 381
179 iso_pu_bacteria 2984509177 2984512936 381
180 iso_pu_bacteria 2984518228 2984520700 381
181 iso_pu_bacteria 2984537506 2984539992 381
182 iso_pu_bacteria 2984587000 2984591593 381
183 iso_pu_bacteria 2984601300 2984602183 381
184 iso_pu_bacteria 650716007 650739060 381
185 iso_pu_bacteria 8003570095 8003572692 381
186 iso_pu_bacteria 8056875544 8056879032 381
187 iso_pu_bacteria 2643221558 2643812912 382
188 iso_pu_bacteria 8018150411 8018153605 382
189 3300006051 Ga0075364_10030272 Ga0075364_100302723 383
190 3300031251 Ga0265327_10000447 Ga0265327_100004478 383
191 3300048924 Ga0496121_0000581 Ga0496121_0000581_4799_5950 383
192 3300050491 nmdc:mga00v17_3192_c1 nmdc:mga00v17_3192_c1_6186_7337 383
193 3300049776 Ga0501280_005659 Ga0501280_005659_271_1461 384
194 3300003781 Ga0055536_1003136 Ga0055536_10031366 385
195 3300003794 Ga0055531_10002423 Ga0055531_1000242311 385
196 3300003856 Ga0058692_1004160 Ga0058692_10041605 385
197 3300005262 Ga0065165_1003754 Ga0065165_10037548 385
198 3300005353 Ga0070669_100064494 Ga0070669_1000644942 385
199 3300005548 Ga0070665_100004421 Ga0070665_1000044213 385
200 3300005548 Ga0070665_100026572 Ga0070665_1000265724 385
201 3300005548 Ga0070665_100027687 Ga0070665_1000276874 385
202 3300006051 Ga0075364_10040374 Ga0075364_100403742 385
203 3300006177 Ga0075362_10007527 Ga0075362_100075271 385
204 3300006178 Ga0075367_10002714 Ga0075367_100027145 385
205 3300006186 Ga0075369_10062565 Ga0075369_100625651 385
206 3300006195 Ga0075366_10005906 Ga0075366_100059065 385
207 3300006946 Ga0079104_1000069 Ga0079104_100006934 385
208 3300006948 Ga0099826_10000423 Ga0099826_1000042311 385
209 3300006948 Ga0099826_10006813 Ga0099826_100068133 385
210 3300009148 Ga0105243_10030835 Ga0105243_100308353 385
211 3300013100 Ga0157373_10001801 Ga0157373_100018016 385
212 3300013102 Ga0157371_10000058 Ga0157371_1000005814 385
213 3300013102 Ga0157371_10050550 Ga0157371_100505502 385
214 3300013104 Ga0157370_10000792 Ga0157370_1000079224 385
215 3300013105 Ga0157369_10029085 Ga0157369_100290855 385
216 3300013307 Ga0157372_10354679 Ga0157372_103546791 385
217 3300025294 Ga0209025_1000441 Ga0209025_100044152 385
218 3300025294 Ga0209025_1044368 Ga0209025_10443682 385
219 3300025297 Ga0209758_1000349 Ga0209758_100034964 385
220 3300025297 Ga0209758_1017031 Ga0209758_10170312 385
221 3300025298 Ga0209050_1003851 Ga0209050_10038516 385
222 3300025304 Ga0209257_1002432 Ga0209257_100243213 385
223 3300025923 Ga0207681_10057682 Ga0207681_100576822 385
224 3300025935 Ga0207709_10158746 Ga0207709_101587462 385
225 3300027111 Ga0209281_1000192 Ga0209281_100019281 385
226 3300027312 Ga0209371_1000009 Ga0209371_1000009428 385
227 3300027312 Ga0209371_1000547 Ga0209371_100054721 385
228 3300027666 Ga0209282_1000224 Ga0209282_100022411 385
229 3300027666 Ga0209282_1003866 Ga0209282_10038665 385
230 3300028379 Ga0268266_10006291 Ga0268266_100062915 385
231 3300028379 Ga0268266_10028097 Ga0268266_100280972 385
232 3300028379 Ga0268266_10057845 Ga0268266_100578452 385
233 3300030500 Ga0268256_1000010 Ga0268256_1000010427 385
234 3300030500 Ga0268256_1014402 Ga0268256_10144021 385
235 3300031852 Ga0307410_10265184 Ga0307410_102651842 385
236 3300037418 Ga0395900_0133282 Ga0395900_0133282_235_1392 385
237 3300037471 Ga0395905_0009097 Ga0395905_0009097_5866_7023 385
238 3300037471 Ga0395905_0033945 Ga0395905_0033945_464_1621 385
239 3300044901 Ga0466960_0138394 Ga0466960_0138394_60_1217 385
240 3300046460 Ga0495638_0031028 Ga0495638_0031028_1101_2258 385
241 3300046501 Ga0495607_0069515 Ga0495607_0069515_693_1862 385
242 3300046674 Ga0495588_0007526 Ga0495588_0007526_517_1674 385
243 3300048907 Ga0496104_0057690 Ga0496104_0057690_1830_2987 385
244 3300048914 Ga0496111_0000317 Ga0496111_0000317_2926_4083 385
245 3300048916 Ga0496113_0065134 Ga0496113_0065134_542_1699 385
246 3300048919 Ga0496116_0000080 Ga0496116_0000080_19252_20409 385
247 3300048919 Ga0496116_0018419 Ga0496116_0018419_2034_3191 385
248 3300048919 Ga0496116_0068672 Ga0496116_0068672_904_2061 385
249 3300048920 Ga0496117_0000002 Ga0496117_0000002_1957438_1958595 385
250 3300048920 Ga0496117_0085119 Ga0496117_0085119_491_1648 385
251 3300048921 Ga0496118_0000233 Ga0496118_0000233_51509_52666 385
252 3300048921 Ga0496118_0087616 Ga0496118_0087616_882_2039 385
253 3300048922 Ga0496119_0070460 Ga0496119_0070460_544_1701 385
254 3300048923 Ga0496120_0000021 Ga0496120_0000021_107980_109137 385
255 3300048923 Ga0496120_0055234 Ga0496120_0055234_682_1839 385
256 3300048924 Ga0496121_0000001 Ga0496121_0000001_439809_440966 385
257 3300048924 Ga0496121_0161281 Ga0496121_0161281_111_1268 385
258 3300048925 Ga0496122_0000001 Ga0496122_0000001_1328228_1329385 385
259 3300048925 Ga0496122_0000009 Ga0496122_0000009_520450_521607 385
260 3300048925 Ga0496122_0029836 Ga0496122_0029836_1440_2597 385
261 3300048925 Ga0496122_0033520 Ga0496122_0033520_430_1587 385
262 3300048926 Ga0496123_0000001 Ga0496123_0000001_1331959_1333116 385
263 3300048926 Ga0496123_0000020 Ga0496123_0000020_325008_326165 385
264 3300048926 Ga0496123_0123248 Ga0496123_0123248_273_1430 385
265 3300048927 Ga0496124_0015389 Ga0496124_0015389_2299_3456 385
266 3300048927 Ga0496124_0027813 Ga0496124_0027813_2105_3262 385
267 3300048927 Ga0496124_0043957 Ga0496124_0043957_2351_3508 385
268 3300048927 Ga0496124_0148923 Ga0496124_0148923_410_1567 385
269 3300048928 Ga0496125_0000001 Ga0496125_0000001_551831_552988 385
270 3300048928 Ga0496125_0021027 Ga0496125_0021027_2161_3318 385
271 3300048929 Ga0496126_0000094 Ga0496126_0000094_33109_34266 385
272 3300050489 nmdc:mga03683_14306_c1 nmdc:mga03683_14306_c1_196_1353 385
273 3300050490 nmdc:mga03n38_11050_c1 nmdc:mga03n38_11050_c1_1160_2317 385
274 3300050491 nmdc:mga00v17_72_c1 nmdc:mga00v17_72_c1_23355_24512 385
275 3300050492 nmdc:mga0yw44_12243_c1 nmdc:mga0yw44_12243_c1_2327_3484 385
276 3300050494 nmdc:mga06z11_6468_c1 nmdc:mga06z11_6468_c1_2797_3954 385
277 3300050516 nmdc:mga0sz30_53814_c1 nmdc:mga0sz30_53814_c1_366_1523 385
278 3300050516 nmdc:mga0sz30_609_c1 nmdc:mga0sz30_609_c1_7763_8920 385
279 3300053088 Ga0500644_0002257 Ga0500644_0002257_2686_3843 385
280 3300053137 Ga0500561_0000123 Ga0500561_0000123_13693_14850 385
281 3300053140 Ga0500573_0007042 Ga0500573_0007042_1931_3154 385
282 3300053153 Ga0500616_0000443 Ga0500616_0000443_10981_12192 385
283 3300053156 Ga0500622_0005723 Ga0500622_0005723_1782_2939 385
284 3300053157 Ga0500624_000320 Ga0500624_000320_9915_11072 385
285 3300053177 Ga0500636_0000010 Ga0500636_0000010_90002_91171 385
286 3300053177 Ga0500636_0006532 Ga0500636_0006532_3223_4380 385
287 iso_pu_bacteria 2818991461 2819686317 385
288 2010549000 RicEn_C2617 RicEn_48030 386

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

99

242

0.98

PF08402

TOBE_2

TOBE domain

358

438

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2onk-assembly1.cif.gz_B abc transporter modbc in complex with its binding protein moda 0.9518 23 253
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.9504 24 237
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9449 21 237
8bmr-assembly1.cif.gz_A cryo-em structure of the wild-type solitary ecf module in msp2n2 lipid nanodiscs in the atpase open and nucleotide-free conformation 0.9417 21 238
6z4w-assembly1.cif.gz_A ftse structure from streptococcus pneumoniae in complex with adp (space group p 1) 0.9407 21 238
ID Description Score Start End Superfamily
af_P77795_1_218_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9877 22 237 3.40.50.300
af_P77795_1_218_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9743 22 237 3.40.50.300
af_P33360_1_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9709 24 253 3.40.50.300
2awoD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9684 24 236 3.40.50.300
af_O69724_1_242_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9627 24 256 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7J3BDG1-F1-model_v4 Molybdate/tungstate import ATP-binding protein WtpC (EC 7.3.2.6) 0.9882 24 245 GO:0005524
GO:0016887
AF-A0A382Y1F8-F1-model_v4 ABC transporter domain-containing protein 0.988 21 219 GO:0001407
GO:0005524
GO:0008643
GO:0015794
GO:0016887
GO:0055052
GO:0140359
AF-A0A379D261-F1-model_v4 deleted 0.987 22 253
AF-A0A5J4F8B2-F1-model_v4 Sulfate/thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 0.9851 24 260 GO:0005524
GO:0015419
GO:0016887
GO:0043190
AF-A0A382Y1F8-F1-model_v4 ABC transporter domain-containing protein 0.9783 21 219 GO:0001407
GO:0005524
GO:0008643
GO:0015794
GO:0016887
GO:0055052
GO:0140359

Feature Viewer

pLDDT pTM Quality
89.61 0.83 High
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Predicted Structure (AlphaFold2)

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