F388848

General Info

Members Datasets Scaffolds Average Seq Length
288 209 226 466

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0054803|Ga0501047_0054803_425_2059
Length 511
Sequence LPHRGVSPVWHSARDAAIKESTMTQRPATGPAPDGSLSGGPATAVLSTATPPVIERRTIDMVPDSERYGHPRNQFTLWFGANMQISTVVTGALAVILGANGLSAIIGLAVGNVLGGIFMALHSAQGPRLGLPQMISSRVQFGVRGAALPLVLVIIMYLGFASTSGVLAGQAVNLIIGVDAPVVGILIFGVLTAVIAIFGYRWIHALGRIATVLGFIVFAYLIVQVFVQYDVGAKFLTAPFGWVSFITAVTLAAGWQMTYAPYVADYSRYLPRETTVASTFWSTFSGSVIGTQIAMSFGVLIALVGGSAFLDNQVGFLGKLATTVTGFNNTRSISQRMRSIIIVAFVAVSVLIAIAASADFLNFFKNFVLLLLAVFIPWSVINLTDYYFISREKVDIPALYTPKGRYGSVNLVAIVSYVIGILVQIPFLSQTLYTGPIAKAMGGLDISWAVALVVTFAIYYPWAKRTLRHPDRMIYPDDAAHAAMPQAAGAAPQGGRASVDDPDDSASELTR

Samples

Sample ID Description Type Environment
1 2511231024 Pseudomonas sp. GM84 Isolate Nodule
2 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
3 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
4 2554235231 Pseudomonas putida MTCC 5279 Isolate Unclassified
5 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
6 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
7 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
8 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
9 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
10 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
11 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
12 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
13 2765235841 Pseudomonas putida AA7 Isolate Unclassified
14 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
15 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
16 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
17 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
18 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
19 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
20 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
21 2808606414 Pantoea sp. SJZ147 Isolate Rhizosphere
22 2808606448 Streptomyces sp. 193411 Isolate Unclassified
23 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
24 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
25 2858950400 Achromobacter sp. K91 Isolate Unclassified
26 2862574272 Streptomyces sp. AcE210 Isolate Nodule
27 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
28 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
29 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
30 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
31 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
32 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
33 2909042592 Labrys sp. LIt4 Isolate Nodule
34 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
35 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
36 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
37 2922554459 Rhodococcus sp. 66b Isolate Unclassified
38 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
39 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
40 2939651529 Pseudomonas sp. 2835 Isolate Rhizosphere
41 2941479691
42 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
43 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
44 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
45 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
46 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
47 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
48 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
49 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
50 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
51 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
52 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
53 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
54 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
55 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
56 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
57 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
58 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
59 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
60 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
61 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
62 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
63 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
64 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
65 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
78 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
80 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
81 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
85 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
99 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
102 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
117 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
118 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
119 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
120 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
121 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
122 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
123 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
124 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
125 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
126 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
127 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
128 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
131 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
132 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
133 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
134 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
137 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
138 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
139 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
140 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
141 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
142 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
143 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
144 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
145 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
146 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
147 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
148 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
149 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
150 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
151 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
152 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
153 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
154 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
155 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
156 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
157 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
158 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
159 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
160 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
161 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
162 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
163 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
164 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
165 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
166 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
167 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
168 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
169 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
170 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
171 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
172 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
173 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
174 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
175 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
176 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
177 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
178 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
179 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
180 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
181 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
182 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
183 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
184 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
185 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
196 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
197 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
198 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
199 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
200 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
201 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
202 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
203 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
204 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
205 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
206 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
207 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere
208 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
209 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.12
Metatranscriptomes 0.35
Isolates 21.53

Biome Distribution

Category Percentage (%)
Aerial Root 0.35
Bulb 0
Endosphere 6.6
Nodule 2.43
Rhizoplane 4.86
Rhizosphere 71.53
Stem 0
Stem Tuber 0
Unclassified 14.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000237 3300002773 Bacteria 36982
2 JGI25151J46595_10008029 3300003187 Bacteria 5117
3 Ga0055540_1000412 3300003792 Bacteria 34539
4 Ga0055540_1008312 3300003792 Bacteria 3751
5 Ga0058692_1000003 3300003856 Bacteria 435295
6 Ga0058692_1000055 3300003856 Bacteria 105550
7 Ga0065703_1000198 3300005272 Bacteria 8535
8 Ga0070670_100057646 3300005331 Bacteria 3334
9 Ga0070661_100000501 3300005344 Bacteria 30057
10 Ga0068853_100043361 3300005539 Bacteria 3848
11 Ga0070664_100000531 3300005564 Bacteria 29123
12 Ga0075363_100004596 3300006048 Bacteria 6057
13 Ga0079104_1001311 3300006946 Bacteria 17103
14 Ga0105251_10003827 3300009011 Bacteria 10720
15 Ga0105251_10009642 3300009011 Bacteria 5683
16 Ga0105251_10011062 3300009011 Bacteria 5178
17 Ga0105251_10044725 3300009011 Bacteria 2138
18 Ga0105244_10001341 3300009036 Bacteria 20090
19 Ga0105244_10010028 3300009036 Bacteria 5771
20 Ga0105244_10019094 3300009036 Bacteria 3835
21 Ga0105244_10054168 3300009036 Bacteria 2036
22 Ga0105244_10073026 3300009036 Bacteria 1708
23 Ga0105247_10000595 3300009101 Bacteria 29350
24 Ga0105243_10000005 3300009148 Bacteria 576265
25 Ga0105243_10008698 3300009148 Bacteria 7784
26 Ga0105242_10002000 3300009176 Bacteria 16049
27 Ga0105237_10001517 3300009545 Bacteria 30445
28 Ga0105246_10008011 3300011119 Bacteria 6485
29 Ga0105246_10033053 3300011119 Bacteria 3435
30 Ga0157373_10004310 3300013100 Bacteria 10713
31 Ga0157373_10052582 3300013100 Bacteria 2898
32 Ga0157371_10008065 3300013102 Bacteria 8421
33 Ga0157371_10028465 3300013102 Bacteria 4046
34 Ga0157370_10021099 3300013104 Bacteria 6495
35 Ga0157369_10010905 3300013105 Bacteria 10351
36 Ga0157369_10030206 3300013105 Bacteria 5978
37 Ga0157369_10112205 3300013105 Bacteria 2897
38 Ga0157369_10134245 3300013105 Bacteria 2621
39 Ga0157375_10088760 3300013308 Bacteria 3147
40 Ga0157375_10093152 3300013308 Bacteria 3078
41 Ga0182005_1007758 3300015265 Bacteria 3199
42 Ga0163161_10000196 3300017792 Bacteria 55511
43 Ga0163161_10002923 3300017792 Bacteria 12102
44 Ga0206353_10520568 3300020082 Bacteria 2714
45 Ga0209672_106723 3300025228 Bacteria 1841
46 Ga0207425_1004840 3300025245 Bacteria 3950
47 Ga0209129_1000096 3300025258 Bacteria 166298
48 Ga0209676_1000445 3300025292 Bacteria 70521
49 Ga0209676_1004776 3300025292 Bacteria 7378
50 Ga0209025_1000045 3300025294 Bacteria 349118
51 Ga0209050_1004553 3300025298 Bacteria 9310
52 Ga0207426_1006568 3300025302 Bacteria 5024
53 Ga0209051_1000267 3300025303 Bacteria 87276
54 Ga0209051_1000753 3300025303 Bacteria 34777
55 Ga0209051_1006228 3300025303 Bacteria 6766
56 Ga0209051_1022587 3300025303 Bacteria 2645
57 Ga0207697_10003604 3300025315 Bacteria 7596
58 Ga0207696_1014022 3300025711 Bacteria 2763
59 Ga0207696_1014316 3300025711 Bacteria 2727
60 Ga0207655_1001055 3300025728 Bacteria 27513
61 Ga0207655_1002001 3300025728 Bacteria 17326
62 Ga0207655_1002371 3300025728 Bacteria 15381
63 Ga0207655_1004812 3300025728 Bacteria 9398
64 Ga0207655_1016037 3300025728 Bacteria 4124
65 Ga0207713_1008104 3300025735 Bacteria 6094
66 Ga0207713_1008451 3300025735 Bacteria 5928
67 Ga0207710_10003696 3300025900 Bacteria 6785
68 Ga0207688_10023653 3300025901 Bacteria 3367
69 Ga0207671_10000015 3300025914 Bacteria 439607
70 Ga0207649_10000001 3300025920 Bacteria 537851
71 Ga0207686_10001443 3300025934 Bacteria 13471
72 Ga0207709_10000001 3300025935 Bacteria 2228154
73 Ga0207709_10004010 3300025935 Bacteria 8584
74 Ga0207679_10000009 3300025945 Bacteria 357262
75 Ga0207639_10096023 3300026041 Bacteria 2384
76 Ga0209281_1000033 3300027111 Bacteria 383539
77 Ga0209371_1000006 3300027312 Bacteria 1055642
78 Ga0209371_1000075 3300027312 Bacteria 196676
79 Ga0209371_1001095 3300027312 Bacteria 20186
80 Ga0209371_1002025 3300027312 Bacteria 12123
81 Ga0209371_1009291 3300027312 Bacteria 3138
82 Ga0307515_10121796 3300028794 Bacteria 2948
83 Ga0268256_1000007 3300030500 Bacteria 1055326
84 Ga0268256_1000068 3300030500 Bacteria 196676
85 Ga0268256_1004970 3300030500 Bacteria 5358
86 Ga0265327_10001203 3300031251 Bacteria 34881
87 Ga0307408_100018999 3300031548 Bacteria 4622
88 Ga0307514_10026550 3300031649 Bacteria 4683
89 Ga0307405_10065762 3300031731 Bacteria 2309
90 Ga0307413_10021131 3300031824 Bacteria 3478
91 Ga0307413_10026811 3300031824 Bacteria 3182
92 Ga0307410_10010251 3300031852 Bacteria 5296
93 Ga0307406_10012358 3300031901 Bacteria 4870
94 Ga0307407_10063382 3300031903 Bacteria 2168
95 Ga0307412_10102595 3300031911 Bacteria 2026
96 Ga0307412_10150545 3300031911 Bacteria 1716
97 Ga0307409_100029725 3300031995 Bacteria 3914
98 Ga0307416_100013358 3300032002 Bacteria 5577
99 Ga0307416_100026330 3300032002 Bacteria 4284
100 Ga0307416_100028891 3300032002 Bacteria 4132
101 Ga0307416_100274219 3300032002 Bacteria 1658
102 Ga0307411_10018418 3300032005 Bacteria 4004
103 Ga0307411_10055873 3300032005 Bacteria 2599
104 Ga0395900_0025802 3300037418 Bacteria 6015
105 Ga0395900_0027661 3300037418 Bacteria 5809
106 Ga0395900_0055779 3300037418 Bacteria 4068
107 Ga0395900_0173499 3300037418 Bacteria 2194
108 Ga0395898_0069995 3300037466 Bacteria 3393
109 Ga0395901_0000026 3300038443 Bacteria 249248
110 Ga0395901_0030464 3300038443 Bacteria 5558
111 Ga0395901_0223768 3300038443 Bacteria 1966
112 Ga0439436_0004902 3300041404 Bacteria 4107
113 Ga0439466_0030170 3300041411 Bacteria 1861
114 Ga0439466_0030234 3300041411 Bacteria 1859
115 Ga0439433_0001800 3300041999 Bacteria 4457
116 Ga0439432_026625 3300042006 Bacteria 1892
117 Ga0439455_0015209 3300042012 Bacteria 1767
118 Ga0439456_000091 3300042013 Bacteria 31484
119 Ga0439456_015112 3300042013 Bacteria 1612
120 Ga0439462_0000737 3300042015 Bacteria 6756
121 Ga0439463_005245 3300042016 Bacteria 3221
122 Ga0450911_000006 3300042115 Bacteria 222143
123 Ga0450893_0007530 3300042532 Bacteria 1769
124 Ga0466972_0018668 3300044658 Bacteria 3467
125 Ga0466965_0017431 3300044683 Bacteria 3433
126 Ga0466961_0117642 3300044693 Bacteria 1670
127 Ga0466971_0001409 3300044719 Bacteria 10103
128 Ga0466970_0000994 3300044765 Bacteria 13642
129 Ga0466970_0010373 3300044765 Bacteria 4729
130 Ga0466970_0054668 3300044765 Bacteria 2132
131 Ga0466957_0062763 3300044842 Bacteria 2282
132 Ga0466960_0004511 3300044901 Bacteria 5454
133 Ga0466958_0001372 3300045836 Bacteria 11506
134 Ga0466967_0029565 3300045976 Bacteria 4588
135 Ga0466967_0059476 3300045976 Bacteria 3383
136 Ga0495603_0002123 3300046455 Bacteria 11656
137 Ga0495603_0009119 3300046455 Bacteria 5997
138 Ga0495591_000861 3300046458 Bacteria 21369
139 Ga0495591_000991 3300046458 Bacteria 19348
140 Ga0495591_012414 3300046458 Bacteria 3174
141 Ga0495629_0000709 3300046459 Bacteria 26985
142 Ga0495629_0001894 3300046459 Bacteria 16299
143 Ga0495638_0002419 3300046460 Bacteria 15252
144 Ga0495584_0000640 3300046491 Bacteria 23299
145 Ga0495585_0012747 3300046492 Bacteria 4946
146 Ga0495594_0001493 3300046499 Bacteria 12123
147 Ga0495594_0033456 3300046499 Bacteria 2795
148 Ga0495606_0013243 3300046507 Bacteria 6539
149 Ga0495606_0060767 3300046507 Bacteria 2419
150 Ga0495610_0072228 3300046512 Bacteria 1606
151 Ga0495616_0001721 3300046513 Bacteria 14930
152 Ga0495620_0011904 3300046515 Bacteria 4519
153 Ga0495631_0022971 3300046518 Bacteria 2896
154 Ga0495632_0023463 3300046519 Bacteria 3294
155 Ga0495632_0035978 3300046519 Bacteria 2521
156 Ga0495632_0049812 3300046519 Unclassified 2069
157 Ga0495637_0000540 3300046520 Bacteria 27179
158 Ga0495637_0012629 3300046520 Bacteria 4032
159 Ga0495654_0001768 3300046530 Bacteria 14476
160 Ga0495622_0015759 3300046557 Bacteria 3515
161 Ga0495668_0032854 3300046616 Bacteria 2917
162 Ga0495611_0042614 3300046648 Bacteria 2027
163 Ga0495661_0015283 3300046665 Bacteria 5125
164 Ga0495588_0019498 3300046674 Bacteria 3322
165 Ga0495613_0052915 3300046689 Bacteria 2989
166 Ga0495671_0025264 3300046692 Bacteria 3089
167 Ga0495649_0025339 3300046694 Bacteria 3303
168 Ga0495672_0002772 3300047320 Bacteria 15675
169 Ga0495676_0029066 3300047321 Bacteria 4710
170 Ga0495676_0030285 3300047321 Bacteria 4596
171 Ga0495676_0106509 3300047321 Bacteria 2065
172 Ga0495679_005220 3300047446 Bacteria 5800
173 Ga0495681_0004481 3300047470 Bacteria 9532
174 Ga0495614_0000050 3300048089 Bacteria 37352
175 Ga0496100_0000740 3300048903 Bacteria 15579
176 Ga0496101_0001624 3300048904 Bacteria 13511
177 Ga0496102_0053214 3300048905 Bacteria 3691
178 Ga0496102_0286195 3300048905 Bacteria 1553
179 Ga0496103_0029899 3300048906 Bacteria 3312
180 Ga0496106_0006913 3300048909 Bacteria 8393
181 Ga0496107_0010147 3300048910 Bacteria 6533
182 Ga0496110_0004849 3300048913 Bacteria 10489
183 Ga0496110_0008336 3300048913 Bacteria 8338
184 Ga0496111_0094938 3300048914 Bacteria 2187
185 Ga0496112_0141906 3300048915 Bacteria 2371
186 Ga0496114_0006893 3300048917 Bacteria 8950
187 Ga0496116_0000206 3300048919 Bacteria 112462
188 Ga0496117_0002747 3300048920 Bacteria 21574
189 Ga0496118_0067231 3300048921 Bacteria 2611
190 Ga0496120_0000029 3300048923 Bacteria 229859
191 Ga0496121_0003427 3300048924 Bacteria 22671
192 Ga0496122_0045124 3300048925 Bacteria 3430
193 Ga0496123_0048866 3300048926 Bacteria 2842
194 Ga0496124_0003301 3300048927 Bacteria 19889
195 Ga0496125_0009358 3300048928 Bacteria 10094
196 Ga0496126_0002565 3300048929 Bacteria 24296
197 Ga0496126_0028148 3300048929 Bacteria 5359
198 Ga0496126_0090638 3300048929 Bacteria 2690
199 Ga0495678_000238 3300049459 Bacteria 62224
200 Ga0495678_004207 3300049459 Bacteria 8458
201 Ga0501031_0005371 3300049568 Bacteria 8344
202 Ga0501033_0005118 3300049570 Bacteria 10427
203 Ga0501033_0054777 3300049570 Bacteria 2950
204 Ga0501034_0002536 3300049571 Bacteria 21841
205 Ga0501034_0083143 3300049571 Bacteria 3203
206 Ga0501036_0000277 3300049572 Bacteria 35238
207 Ga0501036_0005642 3300049572 Bacteria 10151
208 Ga0501038_0054035 3300049574 Bacteria 3454
209 Ga0501038_0136415 3300049574 Bacteria 2010
210 Ga0501039_0006553 3300049575 Bacteria 8838
211 Ga0501043_0001903 3300049579 Bacteria 17889
212 Ga0501046_0017554 3300049580 Bacteria 5967
213 Ga0501047_0007015 3300049581 Bacteria 10576
214 Ga0501047_0054803 3300049581 Bacteria 3856
215 Ga0501048_0002691 3300049582 Bacteria 13565
216 Ga0501068_0057858 3300049584 Bacteria 2351
217 Ga0501070_0023509 3300049586 Bacteria 5162
218 Ga0501074_0000276 3300049590 Bacteria 29509
219 Ga0501279_002505 3300049775 Bacteria 2406
220 Ga0501035_0002533 3300049822 Bacteria 17861
221 Ga0501035_0011605 3300049822 Bacteria 8168
222 Ga0501035_0125310 3300049822 Bacteria 2242
223 Ga0501035_0166635 3300049822 Bacteria 1905
224 nmdc:mga03n38_56323_c1 3300050490 Bacteria 1774
225 Ga0500618_002039 3300053125 Bacteria 8164
226 Ga0466962_0009228 3300061719 Bacteria 4726

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037466 Ga0395898_0069995 Ga0395898_0069995_19_1266 354
2 3300048905 Ga0496102_0286195 Ga0496102_0286195_65_1399 398
3 3300031911 Ga0307412_10150545 Ga0307412_101505452 403
4 3300048914 Ga0496111_0094938 Ga0496111_0094938_813_2168 407
5 3300025228 Ga0209672_106723 Ga0209672_1067232 412
6 3300044765 Ga0466970_0000994 Ga0466970_0000994_8660_10060 412
7 3300045976 Ga0466967_0029565 Ga0466967_0029565_1362_2762 412
8 3300049575 Ga0501039_0006553 Ga0501039_0006553_1557_2867 414
9 3300049584 Ga0501068_0057858 Ga0501068_0057858_498_1808 414
10 3300049586 Ga0501070_0023509 Ga0501070_0023509_2996_4306 414
11 3300049590 Ga0501074_0000276 Ga0501074_0000276_20902_22212 414
12 3300049822 Ga0501035_0002533 Ga0501035_0002533_11735_13045 414
13 3300049574 Ga0501038_0136415 Ga0501038_0136415_683_1993 415
14 3300045836 Ga0466958_0001372 Ga0466958_0001372_8918_10351 421
15 3300031824 Ga0307413_10021131 Ga0307413_100211313 423
16 3300032002 Ga0307416_100274219 Ga0307416_1002742191 423
17 3300037418 Ga0395900_0025802 Ga0395900_0025802_1641_3059 426
18 3300037418 Ga0395900_0055779 Ga0395900_0055779_228_1709 426
19 3300038443 Ga0395901_0030464 Ga0395901_0030464_2106_3587 426
20 3300049822 Ga0501035_0125310 Ga0501035_0125310_655_2133 427
21 3300037418 Ga0395900_0173499 Ga0395900_0173499_660_2075 432
22 3300038443 Ga0395901_0223768 Ga0395901_0223768_418_1833 432
23 3300005331 Ga0070670_100057646 Ga0070670_1000576461 433
24 3300048906 Ga0496103_0029899 Ga0496103_0029899_1351_2808 433
25 3300049568 Ga0501031_0005371 Ga0501031_0005371_5005_6573 433
26 3300049574 Ga0501038_0054035 Ga0501038_0054035_1307_2875 433
27 3300049580 Ga0501046_0017554 Ga0501046_0017554_1305_2873 433
28 3300049581 Ga0501047_0007015 Ga0501047_0007015_8542_10110 433
29 3300049581 Ga0501047_0054803 Ga0501047_0054803_425_2059 433
30 3300049582 Ga0501048_0002691 Ga0501048_0002691_6479_8047 433
31 3300013102 Ga0157371_10028465 Ga0157371_100284653 435
32 3300049570 Ga0501033_0005118 Ga0501033_0005118_985_2406 435
33 3300049822 Ga0501035_0011605 Ga0501035_0011605_1361_2782 435
34 3300038443 Ga0395901_0000026 Ga0395901_0000026_94301_95809 436
35 3300048905 Ga0496102_0053214 Ga0496102_0053214_2142_3572 437
36 3300048904 Ga0496101_0001624 Ga0496101_0001624_58_1539 438
37 3300048909 Ga0496106_0006913 Ga0496106_0006913_3746_5227 438
38 3300048910 Ga0496107_0010147 Ga0496107_0010147_204_1685 438
39 3300048920 Ga0496117_0002747 Ga0496117_0002747_11594_13081 439
40 3300048929 Ga0496126_0002565 Ga0496126_0002565_8049_9533 439
41 3300048929 Ga0496126_0028148 Ga0496126_0028148_1357_2844 439
42 3300013104 Ga0157370_10021099 Ga0157370_100210997 441
43 3300020082 Ga0206353_10520568 Ga0206353_105205682 441
44 3300006048 Ga0075363_100004596 Ga0075363_1000045963 442
45 3300046616 Ga0495668_0032854 Ga0495668_0032854_789_2225 442
46 3300048928 Ga0496125_0009358 Ga0496125_0009358_7132_8568 442
47 3300050490 nmdc:mga03n38_56323_c1 nmdc:mga03n38_56323_c1_289_1725 442
48 3300009036 Ga0105244_10019094 Ga0105244_100190941 443
49 3300013308 Ga0157375_10093152 Ga0157375_100931523 443
50 3300031251 Ga0265327_10001203 Ga0265327_1000120317 443
51 3300048903 Ga0496100_0000740 Ga0496100_0000740_7506_8987 443
52 3300048913 Ga0496110_0008336 Ga0496110_0008336_1498_2979 443
53 3300046458 Ga0495591_012414 Ga0495591_012414_443_1846 445
54 3300046460 Ga0495638_0002419 Ga0495638_0002419_6114_7517 445
55 3300046491 Ga0495584_0000640 Ga0495584_0000640_13757_15160 445
56 3300046513 Ga0495616_0001721 Ga0495616_0001721_4811_6214 445
57 3300046519 Ga0495632_0049812 Ga0495632_0049812_522_1925 445
58 3300046520 Ga0495637_0000540 Ga0495637_0000540_11254_12657 445
59 3300046530 Ga0495654_0001768 Ga0495654_0001768_7883_9286 445
60 3300046665 Ga0495661_0015283 Ga0495661_0015283_276_1679 445
61 3300046692 Ga0495671_0025264 Ga0495671_0025264_994_2397 445
62 3300047320 Ga0495672_0002772 Ga0495672_0002772_8144_9547 445
63 3300047470 Ga0495681_0004481 Ga0495681_0004481_7282_8685 445
64 3300003792 Ga0055540_1000412 Ga0055540_10004128 446
65 3300025303 Ga0209051_1000267 Ga0209051_100026776 446
66 3300048915 Ga0496112_0141906 Ga0496112_0141906_187_1683 448
67 3300009036 Ga0105244_10010028 Ga0105244_100100283 449
68 3300011119 Ga0105246_10008011 Ga0105246_100080113 449
69 3300025315 Ga0207697_10003604 Ga0207697_100036043 449
70 3300025728 Ga0207655_1004812 Ga0207655_10048123 449
71 3300025901 Ga0207688_10023653 Ga0207688_100236532 449
72 3300005344 Ga0070661_100000501 Ga0070661_1000005012 450
73 3300005564 Ga0070664_100000531 Ga0070664_10000053110 450
74 3300009036 Ga0105244_10001341 Ga0105244_1000134113 450
75 3300009176 Ga0105242_10002000 Ga0105242_1000200012 450
76 3300009545 Ga0105237_10001517 Ga0105237_100015174 450
77 3300013105 Ga0157369_10134245 Ga0157369_101342451 450
78 3300013308 Ga0157375_10088760 Ga0157375_100887602 450
79 3300025728 Ga0207655_1001055 Ga0207655_100105513 450
80 3300025914 Ga0207671_10000015 Ga0207671_10000015172 450
81 3300025920 Ga0207649_10000001 Ga0207649_10000001315 450
82 3300025934 Ga0207686_10001443 Ga0207686_1000144311 450
83 3300025945 Ga0207679_10000009 Ga0207679_10000009307 450
84 3300046455 Ga0495603_0002123 Ga0495603_0002123_8004_9410 450
85 3300046455 Ga0495603_0009119 Ga0495603_0009119_1769_3175 450
86 3300046459 Ga0495629_0000709 Ga0495629_0000709_8231_9637 450
87 3300046459 Ga0495629_0001894 Ga0495629_0001894_10565_11971 450
88 3300046499 Ga0495594_0001493 Ga0495594_0001493_4727_6133 450
89 3300046557 Ga0495622_0015759 Ga0495622_0015759_84_1490 450
90 3300046648 Ga0495611_0042614 Ga0495611_0042614_230_1636 450
91 3300046674 Ga0495588_0019498 Ga0495588_0019498_1259_2665 450
92 3300046689 Ga0495613_0052915 Ga0495613_0052915_1329_2735 450
93 3300047321 Ga0495676_0029066 Ga0495676_0029066_577_1983 450
94 3300047321 Ga0495676_0106509 Ga0495676_0106509_474_1880 450
95 3300048089 Ga0495614_0000050 Ga0495614_0000050_28107_29513 450
96 3300013100 Ga0157373_10052582 Ga0157373_100525822 451
97 3300031548 Ga0307408_100018999 Ga0307408_1000189992 451
98 3300046512 Ga0495610_0072228 Ga0495610_0072228_104_1576 451
99 3300046519 Ga0495632_0023463 Ga0495632_0023463_1778_3250 451
100 3300003792 Ga0055540_1008312 Ga0055540_10083124 452
101 3300025303 Ga0209051_1000753 Ga0209051_10007532 452
102 3300045976 Ga0466967_0059476 Ga0466967_0059476_1360_2772 452
103 3300049571 Ga0501034_0002536 Ga0501034_0002536_1646_3073 452
104 3300049572 Ga0501036_0000277 Ga0501036_0000277_18784_20211 452
105 3300049579 Ga0501043_0001903 Ga0501043_0001903_10651_12078 452
106 iso_pu_bacteria 2738543005 2739205804 452
107 3300046492 Ga0495585_0012747 Ga0495585_0012747_2001_3473 453
108 3300049572 Ga0501036_0005642 Ga0501036_0005642_4544_5959 453
109 3300006946 Ga0079104_1001311 Ga0079104_10013112 454
110 3300027111 Ga0209281_1000033 Ga0209281_1000033309 454
111 3300005539 Ga0068853_100043361 Ga0068853_1000433612 455
112 3300026041 Ga0207639_10096023 Ga0207639_100960232 455
113 3300003856 Ga0058692_1000055 Ga0058692_10000552 456
114 3300027312 Ga0209371_1000075 Ga0209371_1000075137 456
115 3300030500 Ga0268256_1000068 Ga0268256_100006860 456
116 3300053125 Ga0500618_002039 Ga0500618_002039_4325_5722 457
117 3300027312 Ga0209371_1009291 Ga0209371_10092912 458
118 3300030500 Ga0268256_1004970 Ga0268256_10049703 458
119 3300044765 Ga0466970_0054668 Ga0466970_0054668_335_1741 458
120 3300044901 Ga0466960_0004511 Ga0466960_0004511_3574_4980 458
121 3300046520 Ga0495637_0012629 Ga0495637_0012629_1443_2912 458
122 3300046694 Ga0495649_0025339 Ga0495649_0025339_1540_3009 458
123 3300047446 Ga0495679_005220 Ga0495679_005220_85_1485 458
124 iso_pu_bacteria 2773857672 2774128739 458
125 iso_pu_bacteria 2808606448 2809234876 458
126 iso_pu_bacteria 2862574272 2862579484 458
127 iso_pu_bacteria 2873151551 2873156028 458
128 iso_pu_bacteria 2984499530 2984501452 458
129 3300027312 Ga0209371_1001095 Ga0209371_10010951 459
130 iso_pu_bacteria 2511231024 2511376948 460
131 iso_pu_bacteria 2554235231 2555247319 460
132 iso_pu_bacteria 2765235841 2765584358 460
133 iso_pu_bacteria 2806310737 2807407878 460
134 iso_pu_bacteria 2806310745 2807456181 460
135 iso_pu_bacteria 2946024296 2946027326 460
136 iso_pu_bacteria 2997451912 2997454513 460
137 iso_pu_bacteria 3007803356 3007805594 460
138 iso_pu_bacteria 8054160619 8054162576 460
139 iso_pu_bacteria 8054929484 8054931939 460
140 iso_pu_bacteria 8056115690 8056119372 460
141 iso_pu_bacteria 8056120720 8056124011 460
142 iso_pu_bacteria 8056137416 8056140477 460
143 3300025292 Ga0209676_1004776 Ga0209676_10047761 461
144 3300025298 Ga0209050_1004553 Ga0209050_10045533 461
145 3300025303 Ga0209051_1022587 Ga0209051_10225872 461
146 3300046499 Ga0495594_0033456 Ga0495594_0033456_195_1595 461
147 3300046507 Ga0495606_0013243 Ga0495606_0013243_2487_3893 461
148 3300046518 Ga0495631_0022971 Ga0495631_0022971_271_1671 461
149 3300047321 Ga0495676_0030285 Ga0495676_0030285_2619_4019 461
150 3300049570 Ga0501033_0054777 Ga0501033_0054777_164_1702 461
151 3300049571 Ga0501034_0083143 Ga0501034_0083143_1272_2810 461
152 3300049822 Ga0501035_0166635 Ga0501035_0166635_190_1728 461
153 3300009011 Ga0105251_10009642 Ga0105251_100096423 462
154 3300009036 Ga0105244_10054168 Ga0105244_100541682 462
155 3300013105 Ga0157369_10010905 Ga0157369_100109057 462
156 3300013105 Ga0157369_10030206 Ga0157369_100302066 462
157 3300037418 Ga0395900_0027661 Ga0395900_0027661_3394_4797 462
158 3300041411 Ga0439466_0030170 Ga0439466_0030170_158_1570 462
159 iso_pu_bacteria 2912723979 2912729079 462
160 3300009011 Ga0105251_10003827 Ga0105251_100038277 463
161 3300009011 Ga0105251_10044725 Ga0105251_100447251 463
162 3300025292 Ga0209676_1000445 Ga0209676_10004459 463
163 3300025302 Ga0207426_1006568 Ga0207426_10065683 463
164 3300025711 Ga0207696_1014022 Ga0207696_10140222 463
165 3300025735 Ga0207713_1008104 Ga0207713_10081042 463
166 3300025735 Ga0207713_1008451 Ga0207713_10084512 463
167 3300027312 Ga0209371_1002025 Ga0209371_10020259 463
168 3300044658 Ga0466972_0018668 Ga0466972_0018668_1936_3375 463
169 3300044683 Ga0466965_0017431 Ga0466965_0017431_670_2109 463
170 3300044719 Ga0466971_0001409 Ga0466971_0001409_6037_7476 463
171 3300044765 Ga0466970_0010373 Ga0466970_0010373_1529_2968 463
172 3300044842 Ga0466957_0062763 Ga0466957_0062763_758_2197 463
173 3300048913 Ga0496110_0004849 Ga0496110_0004849_742_2139 463
174 3300048917 Ga0496114_0006893 Ga0496114_0006893_4456_5853 463
175 3300048925 Ga0496122_0045124 Ga0496122_0045124_245_1642 463
176 3300048926 Ga0496123_0048866 Ga0496123_0048866_1079_2476 463
177 3300048927 Ga0496124_0003301 Ga0496124_0003301_6428_7825 463
178 3300048929 Ga0496126_0090638 Ga0496126_0090638_786_2183 463
179 3300061719 Ga0466962_0009228 Ga0466962_0009228_1917_3356 463
180 iso_pu_bacteria 2615840698 2616552131 463
181 iso_pu_bacteria 2881609920 2881612289 463
182 3300009036 Ga0105244_10073026 Ga0105244_100730261 464
183 3300048919 Ga0496116_0000206 Ga0496116_0000206_7489_8943 464
184 3300048923 Ga0496120_0000029 Ga0496120_0000029_73493_74923 464
185 3300049775 Ga0501279_002505 Ga0501279_002505_137_1576 464
186 iso_pu_bacteria 2808606414 2809123664 464
187 iso_pu_bacteria 2909042592 2909047185 464
188 3300003856 Ga0058692_1000003 Ga0058692_100000348 465
189 3300005272 Ga0065703_1000198 Ga0065703_10001989 465
190 3300009011 Ga0105251_10011062 Ga0105251_100110625 465
191 3300009101 Ga0105247_10000595 Ga0105247_100005957 465
192 3300009148 Ga0105243_10000005 Ga0105243_10000005123 465
193 3300013100 Ga0157373_10004310 Ga0157373_100043106 465
194 3300013102 Ga0157371_10008065 Ga0157371_100080653 465
195 3300017792 Ga0163161_10000196 Ga0163161_100001968 465
196 3300017792 Ga0163161_10002923 Ga0163161_100029238 465
197 3300025711 Ga0207696_1014316 Ga0207696_10143162 465
198 3300025728 Ga0207655_1002001 Ga0207655_100200115 465
199 3300025728 Ga0207655_1002371 Ga0207655_100237111 465
200 3300025728 Ga0207655_1016037 Ga0207655_10160372 465
201 3300025900 Ga0207710_10003696 Ga0207710_100036964 465
202 3300025935 Ga0207709_10000001 Ga0207709_100000011304 465
203 3300027312 Ga0209371_1000006 Ga0209371_1000006455 465
204 3300030500 Ga0268256_1000007 Ga0268256_1000007455 465
205 3300041404 Ga0439436_0004902 Ga0439436_0004902_2396_3808 465
206 3300041411 Ga0439466_0030234 Ga0439466_0030234_217_1629 465
207 3300041999 Ga0439433_0001800 Ga0439433_0001800_2176_3588 465
208 3300042012 Ga0439455_0015209 Ga0439455_0015209_328_1728 465
209 3300042013 Ga0439456_015112 Ga0439456_015112_90_1490 465
210 3300042015 Ga0439462_0000737 Ga0439462_0000737_1366_2778 465
211 3300042115 Ga0450911_000006 Ga0450911_000006_157348_158748 465
212 3300042532 Ga0450893_0007530 Ga0450893_0007530_156_1556 465
213 3300046507 Ga0495606_0060767 Ga0495606_0060767_557_1957 465
214 3300046519 Ga0495632_0035978 Ga0495632_0035978_484_1899 465
215 iso_pu_bacteria 2551306352 2552749084 465
216 iso_pu_bacteria 2554235231 2555247396 465
217 iso_pu_bacteria 2639762793 2640734028 465
218 iso_pu_bacteria 2675903507 2678231006 465
219 iso_pu_bacteria 2773857761 2774388446 465
220 iso_pu_bacteria 2773857770 2774437649 465
221 iso_pu_bacteria 2919182534 2919183917 465
222 iso_pu_bacteria 2941479691 2941482759 465
223 iso_pu_bacteria 2990088156 2990091503 465
224 3300044693 Ga0466961_0117642 Ga0466961_0117642_124_1536 466
225 iso_pu_bacteria 2554235132 2554818145 466
226 iso_pu_bacteria 2606217733 2608380554 466
227 3300042013 Ga0439456_000091 Ga0439456_000091_22723_24144 467
228 iso_pu_bacteria 2858950400 2858952290 467
229 iso_pu_bacteria 2912963787 2912967078 467
230 iso_pu_bacteria 2932422444 2932423553 467
231 iso_pu_bacteria 2939651529 2939656386 467
232 3300031649 Ga0307514_10026550 Ga0307514_100265502 468
233 3300042006 Ga0439432_026625 Ga0439432_026625_64_1521 468
234 3300046458 Ga0495591_000861 Ga0495591_000861_19808_21271 468
235 3300048921 Ga0496118_0067231 Ga0496118_0067231_1045_2508 468
236 3300048924 Ga0496121_0003427 Ga0496121_0003427_1538_3001 468
237 iso_pu_bacteria 2870782633 2870786151 468
238 iso_pu_bacteria 2995726249 2995728507 468
239 3300015265 Ga0182005_1007758 Ga0182005_10077583 469
240 3300028794 Ga0307515_10121796 Ga0307515_101217962 469
241 3300042016 Ga0439463_005245 Ga0439463_005245_1699_3177 469
242 3300046458 Ga0495591_000991 Ga0495591_000991_2914_4392 469
243 3300046515 Ga0495620_0011904 Ga0495620_0011904_1128_2606 469
244 3300049459 Ga0495678_000238 Ga0495678_000238_15426_16904 469
245 3300049459 Ga0495678_004207 Ga0495678_004207_1436_2914 469
246 iso_pu_bacteria 2599185307 2599974386 469
247 iso_pu_bacteria 2883821847 2883825824 469
248 iso_pu_bacteria 2565956761 2566995126 470
249 iso_pu_bacteria 2643221687 2644487785 470
250 iso_pu_bacteria 2738543005 2739206635 470
251 iso_pu_bacteria 2902837492 2902840906 470
252 iso_pu_bacteria 2904535858 2904537339 470
253 iso_pu_bacteria 2922554459 2922559040 470
254 iso_pu_bacteria 2928142448 2928143632 470
255 iso_pu_bacteria 2808606357 2808829437 471
256 iso_pu_bacteria 2862574272 2862581028 471
257 iso_pu_bacteria 8004021418 8004021838 471
258 iso_pu_bacteria 2775506735 2775657977 472
259 iso_pu_bacteria 2811994871 2812318866 472
260 iso_pu_bacteria 2945916053 2945916632 472
261 iso_pu_bacteria 2811994871 2812321419 473
262 iso_pu_bacteria 8004025490 8004029387 473
263 3300031852 Ga0307410_10010251 Ga0307410_100102514 475
264 3300031901 Ga0307406_10012358 Ga0307406_100123582 475
265 3300031995 Ga0307409_100029725 Ga0307409_1000297254 475
266 3300032002 Ga0307416_100013358 Ga0307416_1000133582 475
267 3300032002 Ga0307416_100028891 Ga0307416_1000288913 475
268 3300032005 Ga0307411_10018418 Ga0307411_100184184 475
269 iso_pu_bacteria 2844849076 2844851415 475
270 iso_pu_bacteria 2945920336 2945923288 475
271 iso_pu_bacteria 2946037020 2946040995 475
272 iso_pu_bacteria 2953998280 2954002230 475
273 3300013105 Ga0157369_10112205 Ga0157369_101122053 476
274 3300031731 Ga0307405_10065762 Ga0307405_100657621 478
275 3300031824 Ga0307413_10026811 Ga0307413_100268112 478
276 3300032005 Ga0307411_10055873 Ga0307411_100558732 478
277 3300002773 JGI25152J39213_1000237 JGI25152J39213_100023736 479
278 3300003187 JGI25151J46595_10008029 JGI25151J46595_100080293 479
279 3300009148 Ga0105243_10008698 Ga0105243_100086988 479
280 3300011119 Ga0105246_10033053 Ga0105246_100330531 479
281 3300025245 Ga0207425_1004840 Ga0207425_10048402 479
282 3300025258 Ga0209129_1000096 Ga0209129_1000096114 479
283 3300025294 Ga0209025_1000045 Ga0209025_100004518 479
284 3300025303 Ga0209051_1006228 Ga0209051_10062284 479
285 3300025935 Ga0207709_10004010 Ga0207709_100040109 479
286 3300031903 Ga0307407_10063382 Ga0307407_100633822 479
287 3300031911 Ga0307412_10102595 Ga0307412_101025951 479
288 3300032002 Ga0307416_100026330 Ga0307416_1000263304 479

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02133

Transp_cyt_pur

Permease for cytosine/purines, uracil, thiamine, allantoin

61

327

0.9

PF02133

Transp_cyt_pur

Permease for cytosine/purines, uracil, thiamine, allantoin

312

451

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qoa-assembly2.cif.gz_B structure of codb, a cytosine transporter in an outward-facing conformation 0.8274 12 452
7qoa-assembly2.cif.gz_B structure of codb, a cytosine transporter in an outward-facing conformation 0.807 12 452
2x79-assembly1.cif.gz_A inward facing conformation of mhp1 0.7973 8 464
2x79-assembly1.cif.gz_A inward facing conformation of mhp1 0.7644 8 464
2jln-assembly1.cif.gz_A structure of mhp1, a nucleobase-cation-symport-1 family transporter 0.735 9 464
ID Description Score Start End Superfamily
af_A0A1D8PJQ2_67_497_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.872 9 433 1.10.4160.10
af_P53099_71_468_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.8711 12 382 1.10.4160.10
af_A0A1D8PJQ2_67_497_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.8586 9 433 1.10.4160.10
af_Q12119_63_501_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.8465 5 433 1.10.4160.10
af_P0AA82_3_417_1.10.4160.10 Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease 0.8399 12 459 1.10.4160.10
ID Description Score Start End GO Terms
AF-A0A2N3GRM3-F1-model_v4 deleted 0.9844 9 465
AF-A0A0L8QEK1-F1-model_v4 deleted 0.9797 8 255
AF-A0A0H2XLV2-F1-model_v4 Permease for cytosine/purines, uracil, thiamine, allantoin 0.9795 38 470 GO:0005886
GO:0022857
AF-A0A378H455-F1-model_v4 Cytosine/purine/uracil/thiamine/allantoin permease family protein 0.9793 43 457 GO:0005886
GO:0022857
AF-S3THF9-F1-model_v4 deleted 0.9776 74 457

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pLDDT pTM Quality
88.77 0.88 High
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Predicted Structure (AlphaFold2)

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