F388821

General Info

Members Datasets Scaffolds Average Seq Length
288 230 576 184

Family's Representative Sequence

Representative Sequence 3300048913|Ga0496110_1082140|Ga0496110_1082140_12_665
Length 217
Sequence MPRWYARGPSGGPGTDEFCRVHPSIVRRNRRQEQTVGSIHVHEFTTMNGVIDAPMWTMPYGFDPGMGEIIGAVCEASEAILLGRTTYEMFAPAWSTRTVDDDPGAPFFNDTPKYVVSSTLHDPEWGPVTVLGGYDATAIAALKESVDGGIYVSGSGTLVRAMIADGLVDELHLFVYPLARSEGPRLFEPGDPESTWSLADSRHYENGVQYLNYRFAG

Samples

Sample ID Description Type Environment
1 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
4 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
35 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
42 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
58 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
59 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
60 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
61 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
63 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
69 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
70 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
71 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
72 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
76 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
77 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
78 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
79 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
80 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
81 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
82 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
83 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
84 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
85 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
86 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
87 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
88 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
89 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
90 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
91 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
136 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
138 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
139 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
140 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
141 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
142 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
143 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
144 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
145 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
146 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
147 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
148 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
149 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
150 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
151 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
152 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
153 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
154 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
155 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
156 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
157 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
158 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
159 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
160 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
161 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
162 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
163 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
164 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
165 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
166 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
167 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
168 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
169 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
170 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
171 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
172 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
173 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
174 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
175 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
176 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
177 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
178 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
179 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
180 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
181 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
182 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
183 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
184 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
185 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
186 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
187 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
188 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
189 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
190 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
191 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
192 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
193 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
194 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
195 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
196 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
197 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
198 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
199 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
200 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
201 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
202 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
203 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
204 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
205 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
206 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
207 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
208 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
209 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
210 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
211 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
212 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
213 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
214 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
215 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
216 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
217 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
218 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
219 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
221 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
222 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
223 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
224 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
225 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
226 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
227 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
228 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
229 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
230 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.31
Metatranscriptomes 0.35
Isolates 0.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.12
Nodule 0
Rhizoplane 10.76
Rhizosphere 80.56
Stem 0
Stem Tuber 0
Unclassified 5.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496110_1082140 3300048913 Bacteria 710
2 JGI24738J21930_10079109 3300002075 Bacteria 687
3 Ga0055527_1000003 3300003760 Bacteria 705001
4 Ga0055542_1000005 3300003762 Bacteria 550280
5 Ga0055529_1000046 3300003763 Bacteria 209430
6 Ga0070658_10316484 3300005327 Bacteria 1332
7 Ga0070676_10780822 3300005328 Bacteria 703
8 Ga0070683_100164392 3300005329 Bacteria 2106
9 Ga0070690_100170598 3300005330 Bacteria 1497
10 Ga0068869_100037180 3300005334 Bacteria 3461
11 Ga0070666_10010718 3300005335 Bacteria 5737
12 Ga0070682_100104319 3300005337 Bacteria 1877
13 Ga0070682_100343614 3300005337 Bacteria 1110
14 Ga0068868_100363849 3300005338 Bacteria 1241
15 Ga0070660_100243756 3300005339 Bacteria 1464
16 Ga0070687_100022951 3300005343 Bacteria 2958
17 Ga0070668_100478954 3300005347 Bacteria 1074
18 Ga0070668_101372086 3300005347 Bacteria 644
19 Ga0070675_100092854 3300005354 Bacteria 2531
20 Ga0070671_100079803 3300005355 Unclassified 2735
21 Ga0070674_100068757 3300005356 Bacteria 2496
22 Ga0070673_100465723 3300005364 Bacteria 1139
23 Ga0070688_100016168 3300005365 Bacteria 4261
24 Ga0070667_100138955 3300005367 Bacteria 2126
25 Ga0070709_10018642 3300005434 Bacteria 4001
26 Ga0070714_100533074 3300005435 Bacteria 1122
27 Ga0070713_100115386 3300005436 Bacteria 2347
28 Ga0070710_10730084 3300005437 Bacteria 701
29 Ga0070711_100190348 3300005439 Bacteria 1576
30 Ga0070705_100406412 3300005440 Bacteria 1010
31 Ga0070700_100097633 3300005441 Bacteria 1930
32 Ga0070700_100151503 3300005441 Bacteria 1586
33 Ga0070694_100066107 3300005444 Bacteria 2480
34 Ga0070708_101072747 3300005445 Unclassified 755
35 Ga0070663_100337879 3300005455 Bacteria 1216
36 Ga0070678_100348009 3300005456 Bacteria 1273
37 Ga0070706_100962395 3300005467 Unclassified 788
38 Ga0070707_100838066 3300005468 Bacteria 883
39 Ga0070699_100000014 3300005518 Bacteria 218133
40 Ga0070699_100001466 3300005518 Bacteria 21605
41 Ga0070679_100367715 3300005530 Bacteria 1385
42 Ga0070679_100726686 3300005530 Bacteria 936
43 Ga0068853_100174476 3300005539 Bacteria 1946
44 Ga0070672_100055407 3300005543 Bacteria 3106
45 Ga0070686_100646197 3300005544 Bacteria 838
46 Ga0070696_100241579 3300005546 Bacteria 1362
47 Ga0070693_100034039 3300005547 Bacteria 2817
48 Ga0070693_100292313 3300005547 Bacteria 1095
49 Ga0070665_100464763 3300005548 Bacteria 1275
50 Ga0070704_100022970 3300005549 Bacteria 4065
51 Ga0068855_100006783 3300005563 Bacteria 13888
52 Ga0070664_100315062 3300005564 Bacteria 1416
53 Ga0068857_101339786 3300005577 Bacteria 695
54 Ga0068856_100052421 3300005614 Bacteria 4023
55 Ga0070702_100069213 3300005615 Bacteria 2079
56 Ga0068852_100156919 3300005616 Bacteria 2121
57 Ga0068859_100082849 3300005617 Bacteria 3250
58 Ga0068864_100018964 3300005618 Bacteria 5751
59 Ga0068861_100033476 3300005719 Bacteria 3791
60 Ga0068861_100037964 3300005719 Bacteria 3583
61 Ga0068863_100413579 3300005841 Bacteria 1320
62 Ga0068858_100029594 3300005842 Bacteria 5086
63 Ga0068860_100070679 3300005843 Bacteria 3318
64 Ga0068862_100500870 3300005844 Bacteria 1153
65 Ga0081540_1001926 3300005983 Bacteria 17391
66 Ga0070717_10066903 3300006028 Bacteria 2988
67 Ga0070717_10723148 3300006028 Unclassified 905
68 Ga0070716_100448803 3300006173 Bacteria 939
69 Ga0097621_100287148 3300006237 Bacteria 1449
70 Ga0068871_100022732 3300006358 Bacteria 4839
71 Ga0075433_10025806 3300006852 Bacteria 4969
72 Ga0075434_100103545 3300006871 Unclassified 2855
73 Ga0068865_100682982 3300006881 Bacteria 876
74 Ga0075436_100028269 3300006914 Bacteria 3857
75 Ga0111539_10175921 3300009094 Bacteria 2500
76 Ga0105245_10009037 3300009098 Bacteria 8685
77 Ga0105247_10007902 3300009101 Bacteria 6504
78 Ga0105243_10012228 3300009148 Bacteria 6490
79 Ga0105243_11081819 3300009148 Bacteria 809
80 Ga0105241_10036924 3300009174 Bacteria 3678
81 Ga0105242_10035953 3300009176 Bacteria 3971
82 Ga0105237_10078105 3300009545 Bacteria 3300
83 Ga0105238_10048336 3300009551 Bacteria 4288
84 Ga0105238_11248412 3300009551 Unclassified 768
85 Ga0105249_10076364 3300009553 Bacteria 3105
86 Ga0105239_10041047 3300010375 Bacteria 5071
87 Ga0105246_10022506 3300011119 Bacteria 4066
88 Ga0157371_10017213 3300013102 Bacteria 5374
89 Ga0157370_10167619 3300013104 Bacteria 2042
90 Ga0157369_10073366 3300013105 Bacteria 3672
91 Ga0157369_11038426 3300013105 Bacteria 839
92 Ga0157374_10389218 3300013296 Bacteria 1389
93 Ga0157378_10015607 3300013297 Bacteria 6652
94 Ga0163162_10006435 3300013306 Bacteria 11377
95 Ga0157372_10187194 3300013307 Bacteria 2397
96 Ga0157372_10523059 3300013307 Bacteria 1383
97 Ga0157375_10121626 3300013308 Bacteria 2720
98 Ga0157375_12440439 3300013308 Bacteria 624
99 Ga0157380_10062547 3300014326 Bacteria 2982
100 Ga0157377_10004482 3300014745 Bacteria 6439
101 Ga0157376_10014760 3300014969 Bacteria 5876
102 Ga0213876_10068464 3300021384 Bacteria 1875
103 Ga0213876_10101255 3300021384 Bacteria 1527
104 Ga0213876_10474572 3300021384 Bacteria 665
105 Ga0213875_10199837 3300021388 Bacteria 940
106 Ga0209672_100003 3300025228 Bacteria 1560476
107 Ga0209147_100447 3300025229 Bacteria 25951
108 Ga0209148_1000004 3300025254 Bacteria 1844481
109 Ga0209455_1000080 3300025272 Bacteria 266151
110 Ga0209455_1001953 3300025272 Bacteria 8496
111 Ga0207653_10025522 3300025885 Bacteria 1890
112 Ga0207692_10497483 3300025898 Bacteria 773
113 Ga0207688_10002113 3300025901 Bacteria 10690
114 Ga0207680_10332564 3300025903 Bacteria 1064
115 Ga0207647_10014560 3300025904 Bacteria 5421
116 Ga0207647_10122321 3300025904 Bacteria 1534
117 Ga0207699_10602003 3300025906 Bacteria 800
118 Ga0207645_10652273 3300025907 Bacteria 715
119 Ga0207684_10397092 3300025910 Unclassified 1185
120 Ga0207684_10684539 3300025910 Bacteria 872
121 Ga0207707_10525010 3300025912 Bacteria 1008
122 Ga0207693_10006633 3300025915 Bacteria 9562
123 Ga0207662_10027166 3300025918 Bacteria 3304
124 Ga0207657_10016812 3300025919 Bacteria 7043
125 Ga0207652_10675399 3300025921 Bacteria 923
126 Ga0207681_10267044 3300025923 Bacteria 1342
127 Ga0207694_10588061 3300025924 Bacteria 936
128 Ga0207659_10793393 3300025926 Bacteria 813
129 Ga0207687_10295740 3300025927 Bacteria 1303
130 Ga0207700_10905826 3300025928 Bacteria 789
131 Ga0207664_10188019 3300025929 Bacteria 1777
132 Ga0207644_10175582 3300025931 Bacteria 1676
133 Ga0207706_10048573 3300025933 Bacteria 3753
134 Ga0207686_10036754 3300025934 Bacteria 2951
135 Ga0207709_10189838 3300025935 Bacteria 1459
136 Ga0207704_10193008 3300025938 Bacteria 1483
137 Ga0207704_10488323 3300025938 Bacteria 990
138 Ga0207665_10003409 3300025939 Bacteria 10641
139 Ga0207691_10080266 3300025940 Bacteria 2934
140 Ga0207661_10130246 3300025944 Bacteria 2154
141 Ga0207667_11004855 3300025949 Bacteria 821
142 Ga0207651_10151512 3300025960 Unclassified 1806
143 Ga0207658_10638099 3300025986 Bacteria 959
144 Ga0207677_10151831 3300026023 Bacteria 1788
145 Ga0207703_10322737 3300026035 Bacteria 1414
146 Ga0207678_10005337 3300026067 Bacteria 11510
147 Ga0207678_10318960 3300026067 Bacteria 1337
148 Ga0207708_10012010 3300026075 Bacteria 6452
149 Ga0207708_10091899 3300026075 Bacteria 2341
150 Ga0207702_10326644 3300026078 Bacteria 1462
151 Ga0207641_11020084 3300026088 Bacteria 824
152 Ga0207676_11648193 3300026095 Bacteria 639
153 Ga0207675_100014559 3300026118 Bacteria 7331
154 Ga0207683_10026727 3300026121 Bacteria 4985
155 Ga0207698_10145406 3300026142 Bacteria 2049
156 Ga0207428_10936111 3300027907 Bacteria 611
157 Ga0268264_11290280 3300028381 Bacteria 740
158 Ga0265334_10197280 3300028573 Bacteria 700
159 Ga0265338_10265457 3300028800 Bacteria 1260
160 Ga0265324_10004723 3300029957 Bacteria 6040
161 Ga0265332_10036233 3300031238 Bacteria 2142
162 Ga0265320_10019831 3300031240 Bacteria 3664
163 Ga0265339_10334477 3300031249 Bacteria 716
164 Ga0265331_10026768 3300031250 Bacteria 2896
165 Ga0265316_10359555 3300031344 Bacteria 1053
166 Ga0307408_100929554 3300031548 Bacteria 798
167 Ga0265313_10031758 3300031595 Bacteria 2704
168 Ga0265314_10030312 3300031711 Bacteria 4005
169 Ga0307405_10326216 3300031731 Bacteria 1175
170 Ga0307410_11178623 3300031852 Bacteria 667
171 Ga0307412_10382655 3300031911 Bacteria 1140
172 Ga0307409_100246189 3300031995 Bacteria 1631
173 Ga0307416_100076866 3300032002 Bacteria 2801
174 Ga0307416_100167804 3300032002 Bacteria 2039
175 Ga0307416_100764487 3300032002 Bacteria 1060
176 Ga0316583_10071560 3300032133 Bacteria 1213
177 Ga0307507_10021317 3300033179 Bacteria 7219
178 Ga0373928_0058147 3300035084 Bacteria 929
179 Ga0373932_0128847 3300035112 Unclassified 851
180 Ga0373939_0073910 3300035114 Bacteria 1117
181 Ga0373941_0179565 3300035115 Bacteria 794
182 Ga0373960_0091617 3300035121 Bacteria 973
183 Ga0373962_0006602 3300035242 Bacteria 2812
184 Ga0316574_0278591 3300035398 Bacteria 1065
185 Ga0373931_0489815 3300035691 Bacteria 791
186 Ga0316582_0078451 3300036647 Bacteria 2151
187 Ga0316584_0277457 3300036712 Bacteria 1218
188 Ga0395899_0119205 3300037312 Bacteria 1892
189 Ga0395900_0007195 3300037418 Bacteria 11534
190 Ga0395900_0011373 3300037418 Bacteria 9107
191 Ga0395900_0317097 3300037418 Bacteria 1540
192 Ga0395898_0000593 3300037466 Bacteria 67338
193 Ga0395898_0080366 3300037466 Bacteria 3144
194 Ga0395898_0390985 3300037466 Bacteria 1326
195 Ga0395898_0431723 3300037466 Bacteria 1255
196 Ga0436364_0543707 3300037853 Bacteria 1035
197 Ga0395901_0003830 3300038443 Bacteria 15162
198 Ga0395901_0072848 3300038443 Bacteria 3581
199 Ga0436365_0042598 3300039437 Unclassified 1520
200 Ga0436365_0157247 3300039437 Bacteria 20207
201 Ga0436365_0584095 3300039437 Bacteria 2765
202 Ga0436363_0156404 3300039450 Bacteria 891
203 Ga0451793_1102923 3300041452 Bacteria 3112
204 Ga0451797_0257810 3300041453 Bacteria 809
205 Ga0451797_0789477 3300041453 Bacteria 959
206 Ga0451802_2181364 3300041460 Bacteria 724
207 Ga0451843_0530883 3300041509 Bacteria 2260
208 Ga0451853_0214895 3300041512 Bacteria 954
209 Ga0450888_002416 3300042126 Bacteria 1845
210 Ga0439464_0072306 3300042439 Bacteria 1022
211 Ga0466972_0013116 3300044658 Bacteria 4164
212 Ga0466972_0038727 3300044658 Bacteria 2329
213 Ga0466965_0010041 3300044683 Bacteria 4406
214 Ga0466965_0164644 3300044683 Bacteria 1164
215 Ga0466966_0031824 3300044684 Bacteria 3421
216 Ga0466966_0067345 3300044684 Bacteria 2249
217 Ga0466961_0221394 3300044693 Bacteria 1166
218 Ga0466963_0172695 3300044694 Bacteria 1507
219 Ga0466963_0334760 3300044694 Bacteria 1066
220 Ga0466963_0394945 3300044694 Bacteria 975
221 Ga0466968_0067809 3300044735 Bacteria 1548
222 Ga0466970_0010690 3300044765 Bacteria 4664
223 Ga0466970_0428752 3300044765 Bacteria 756
224 Ga0466957_0934288 3300044842 Bacteria 621
225 Ga0466960_0096908 3300044901 Bacteria 1513
226 Ga0466960_0216275 3300044901 Bacteria 1053
227 Ga0466960_0303379 3300044901 Bacteria 900
228 Ga0466958_0052309 3300045836 Bacteria 2475
229 Ga0466958_0167568 3300045836 Bacteria 1390
230 Ga0466958_0207214 3300045836 Bacteria 1249
231 Ga0466958_0293685 3300045836 Bacteria 1043
232 Ga0466958_0385971 3300045836 Bacteria 903
233 Ga0466967_0105016 3300045976 Bacteria 2587
234 Ga0466967_0276694 3300045976 Bacteria 1610
235 Ga0495592_0357960 3300046454 Bacteria 934
236 Ga0495603_0369971 3300046455 Bacteria 822
237 Ga0495629_0469488 3300046459 Bacteria 851
238 Ga0495620_0115885 3300046515 Bacteria 1059
239 Ga0495652_0665295 3300046529 Unclassified 704
240 Ga0495652_0733594 3300046529 Bacteria 662
241 Ga0495635_0070725 3300046663 Bacteria 2392
242 Ga0495599_0510421 3300046678 Bacteria 707
243 Ga0495624_0029172 3300046690 Bacteria 3601
244 Ga0495581_0410310 3300047315 Bacteria 790
245 Ga0495674_0167568 3300047319 Bacteria 1835
246 Ga0495593_0334802 3300047673 Bacteria 757
247 Ga0496100_0274570 3300048903 Bacteria 1254
248 Ga0496100_1564071 3300048903 Bacteria 521
249 Ga0496101_0225519 3300048904 Bacteria 1455
250 Ga0496101_0386585 3300048904 Bacteria 1101
251 Ga0496102_0114532 3300048905 Bacteria 2516
252 Ga0496102_0542284 3300048905 Bacteria 1086
253 Ga0496103_0009861 3300048906 Bacteria 5654
254 Ga0496104_0017647 3300048907 Bacteria 6504
255 Ga0496105_0079418 3300048908 Bacteria 2709
256 Ga0496106_0095686 3300048909 Bacteria 2297
257 Ga0496107_0048451 3300048910 Bacteria 3061
258 Ga0496108_0206770 3300048911 Bacteria 1703
259 Ga0496108_1397190 3300048911 Bacteria 586
260 Ga0496109_1153081 3300048912 Bacteria 712
261 Ga0496110_0108490 3300048913 Unclassified 2492
262 Ga0496110_0222966 3300048913 Bacteria 1715
263 Ga0496110_0598246 3300048913 Bacteria 1001
264 Ga0496111_0020830 3300048914 Bacteria 4571
265 Ga0496112_0088120 3300048915 Bacteria 3071
266 Ga0496113_0062435 3300048916 Bacteria 2813
267 Ga0496114_0031760 3300048917 Bacteria 4345
268 Ga0496114_0054192 3300048917 Bacteria 3344
269 Ga0496114_0060036 3300048917 Bacteria 3177
270 Ga0496115_0039676 3300048918 Bacteria 3740
271 Ga0496115_0057433 3300048918 Bacteria 3130
272 Ga0496115_0837770 3300048918 Bacteria 713
273 Ga0496117_0029406 3300048920 Bacteria 4237
274 Ga0496117_0056444 3300048920 Bacteria 2735
275 Ga0496118_0018665 3300048921 Bacteria 6235
276 Ga0496120_0030518 3300048923 Bacteria 3275
277 Ga0501047_0043518 3300049581 Bacteria 4338
278 Ga0501070_0000953 3300049586 Bacteria 26124
279 Ga0501071_0172586 3300049587 Unclassified 1619
280 Ga0501035_0021685 3300049822 Bacteria 5907
281 Ga0501045_0640888 3300049824 Unclassified 786
282 nmdc:mga0rr50_543793_c1 3300050513 Bacteria 989
283 nmdc:mga0a205_16343_c1 3300050515 Bacteria 6950
284 Ga0495601_0696692 3300053077 Bacteria 648
285 Ga0500620_006138 3300053155 Bacteria 2850
286 Ga0587088_123001 3300059508 Unclassified 603
287 Ga0466962_0120319 3300061719 Bacteria 1267
288 2523386282 2523231044 Bacteria 6434991
289 Ga0496110_1082140
290 JGI24738J21930_10079109
291 Ga0055527_1000003
292 Ga0055542_1000005
293 Ga0055529_1000046
294 Ga0070658_10316484
295 Ga0070676_10780822
296 Ga0070683_100164392
297 Ga0070690_100170598
298 Ga0068869_100037180
299 Ga0070666_10010718
300 Ga0070682_100104319
301 Ga0070682_100343614
302 Ga0068868_100363849
303 Ga0070660_100243756
304 Ga0070687_100022951
305 Ga0070668_100478954
306 Ga0070668_101372086
307 Ga0070675_100092854
308 Ga0070671_100079803
309 Ga0070674_100068757
310 Ga0070673_100465723
311 Ga0070688_100016168
312 Ga0070667_100138955
313 Ga0070709_10018642
314 Ga0070714_100533074
315 Ga0070713_100115386
316 Ga0070710_10730084
317 Ga0070711_100190348
318 Ga0070705_100406412
319 Ga0070700_100097633
320 Ga0070700_100151503
321 Ga0070694_100066107
322 Ga0070708_101072747
323 Ga0070663_100337879
324 Ga0070678_100348009
325 Ga0070706_100962395
326 Ga0070707_100838066
327 Ga0070699_100000014
328 Ga0070699_100001466
329 Ga0070679_100367715
330 Ga0070679_100726686
331 Ga0068853_100174476
332 Ga0070672_100055407
333 Ga0070686_100646197
334 Ga0070696_100241579
335 Ga0070693_100034039
336 Ga0070693_100292313
337 Ga0070665_100464763
338 Ga0070704_100022970
339 Ga0068855_100006783
340 Ga0070664_100315062
341 Ga0068857_101339786
342 Ga0068856_100052421
343 Ga0070702_100069213
344 Ga0068852_100156919
345 Ga0068859_100082849
346 Ga0068864_100018964
347 Ga0068861_100033476
348 Ga0068861_100037964
349 Ga0068863_100413579
350 Ga0068858_100029594
351 Ga0068860_100070679
352 Ga0068862_100500870
353 Ga0081540_1001926
354 Ga0070717_10066903
355 Ga0070717_10723148
356 Ga0070716_100448803
357 Ga0097621_100287148
358 Ga0068871_100022732
359 Ga0075433_10025806
360 Ga0075434_100103545
361 Ga0068865_100682982
362 Ga0075436_100028269
363 Ga0111539_10175921
364 Ga0105245_10009037
365 Ga0105247_10007902
366 Ga0105243_10012228
367 Ga0105243_11081819
368 Ga0105241_10036924
369 Ga0105242_10035953
370 Ga0105237_10078105
371 Ga0105238_10048336
372 Ga0105238_11248412
373 Ga0105249_10076364
374 Ga0105239_10041047
375 Ga0105246_10022506
376 Ga0157371_10017213
377 Ga0157370_10167619
378 Ga0157369_10073366
379 Ga0157369_11038426
380 Ga0157374_10389218
381 Ga0157378_10015607
382 Ga0163162_10006435
383 Ga0157372_10187194
384 Ga0157372_10523059
385 Ga0157375_10121626
386 Ga0157375_12440439
387 Ga0157380_10062547
388 Ga0157377_10004482
389 Ga0157376_10014760
390 Ga0213876_10068464
391 Ga0213876_10101255
392 Ga0213876_10474572
393 Ga0213875_10199837
394 Ga0209672_100003
395 Ga0209147_100447
396 Ga0209148_1000004
397 Ga0209455_1000080
398 Ga0209455_1001953
399 Ga0207653_10025522
400 Ga0207692_10497483
401 Ga0207688_10002113
402 Ga0207680_10332564
403 Ga0207647_10014560
404 Ga0207647_10122321
405 Ga0207699_10602003
406 Ga0207645_10652273
407 Ga0207684_10397092
408 Ga0207684_10684539
409 Ga0207707_10525010
410 Ga0207693_10006633
411 Ga0207662_10027166
412 Ga0207657_10016812
413 Ga0207652_10675399
414 Ga0207681_10267044
415 Ga0207694_10588061
416 Ga0207659_10793393
417 Ga0207687_10295740
418 Ga0207700_10905826
419 Ga0207664_10188019
420 Ga0207644_10175582
421 Ga0207706_10048573
422 Ga0207686_10036754
423 Ga0207709_10189838
424 Ga0207704_10193008
425 Ga0207704_10488323
426 Ga0207665_10003409
427 Ga0207691_10080266
428 Ga0207661_10130246
429 Ga0207667_11004855
430 Ga0207651_10151512
431 Ga0207658_10638099
432 Ga0207677_10151831
433 Ga0207703_10322737
434 Ga0207678_10005337
435 Ga0207678_10318960
436 Ga0207708_10012010
437 Ga0207708_10091899
438 Ga0207702_10326644
439 Ga0207641_11020084
440 Ga0207676_11648193
441 Ga0207675_100014559
442 Ga0207683_10026727
443 Ga0207698_10145406
444 Ga0207428_10936111
445 Ga0268264_11290280
446 Ga0265334_10197280
447 Ga0265338_10265457
448 Ga0265324_10004723
449 Ga0265332_10036233
450 Ga0265320_10019831
451 Ga0265339_10334477
452 Ga0265331_10026768
453 Ga0265316_10359555
454 Ga0307408_100929554
455 Ga0265313_10031758
456 Ga0265314_10030312
457 Ga0307405_10326216
458 Ga0307410_11178623
459 Ga0307412_10382655
460 Ga0307409_100246189
461 Ga0307416_100076866
462 Ga0307416_100167804
463 Ga0307416_100764487
464 Ga0316583_10071560
465 Ga0307507_10021317
466 Ga0373928_0058147
467 Ga0373932_0128847
468 Ga0373939_0073910
469 Ga0373941_0179565
470 Ga0373960_0091617
471 Ga0373962_0006602
472 Ga0316574_0278591
473 Ga0373931_0489815
474 Ga0316582_0078451
475 Ga0316584_0277457
476 Ga0395899_0119205
477 Ga0395900_0007195
478 Ga0395900_0011373
479 Ga0395900_0317097
480 Ga0395898_0000593
481 Ga0395898_0080366
482 Ga0395898_0390985
483 Ga0395898_0431723
484 Ga0436364_0543707
485 Ga0395901_0003830
486 Ga0395901_0072848
487 Ga0436365_0042598
488 Ga0436365_0157247
489 Ga0436365_0584095
490 Ga0436363_0156404
491 Ga0451793_1102923
492 Ga0451797_0257810
493 Ga0451797_0789477
494 Ga0451802_2181364
495 Ga0451843_0530883
496 Ga0451853_0214895
497 Ga0450888_002416
498 Ga0439464_0072306
499 Ga0466972_0013116
500 Ga0466972_0038727
501 Ga0466965_0010041
502 Ga0466965_0164644
503 Ga0466966_0031824
504 Ga0466966_0067345
505 Ga0466961_0221394
506 Ga0466963_0172695
507 Ga0466963_0334760
508 Ga0466963_0394945
509 Ga0466968_0067809
510 Ga0466970_0010690
511 Ga0466970_0428752
512 Ga0466957_0934288
513 Ga0466960_0096908
514 Ga0466960_0216275
515 Ga0466960_0303379
516 Ga0466958_0052309
517 Ga0466958_0167568
518 Ga0466958_0207214
519 Ga0466958_0293685
520 Ga0466958_0385971
521 Ga0466967_0105016
522 Ga0466967_0276694
523 Ga0495592_0357960
524 Ga0495603_0369971
525 Ga0495629_0469488
526 Ga0495620_0115885
527 Ga0495652_0665295
528 Ga0495652_0733594
529 Ga0495635_0070725
530 Ga0495599_0510421
531 Ga0495624_0029172
532 Ga0495581_0410310
533 Ga0495674_0167568
534 Ga0495593_0334802
535 Ga0496100_0274570
536 Ga0496100_1564071
537 Ga0496101_0225519
538 Ga0496101_0386585
539 Ga0496102_0114532
540 Ga0496102_0542284
541 Ga0496103_0009861
542 Ga0496104_0017647
543 Ga0496105_0079418
544 Ga0496106_0095686
545 Ga0496107_0048451
546 Ga0496108_0206770
547 Ga0496108_1397190
548 Ga0496109_1153081
549 Ga0496110_0108490
550 Ga0496110_0222966
551 Ga0496110_0598246
552 Ga0496111_0020830
553 Ga0496112_0088120
554 Ga0496113_0062435
555 Ga0496114_0031760
556 Ga0496114_0054192
557 Ga0496114_0060036
558 Ga0496115_0039676
559 Ga0496115_0057433
560 Ga0496115_0837770
561 Ga0496117_0029406
562 Ga0496117_0056444
563 Ga0496118_0018665
564 Ga0496120_0030518
565 Ga0501047_0043518
566 Ga0501070_0000953
567 Ga0501071_0172586
568 Ga0501035_0021685
569 Ga0501045_0640888
570 nmdc:mga0rr50_543793_c1
571 nmdc:mga0a205_16343_c1
572 Ga0495601_0696692
573 Ga0500620_006138
574 Ga0587088_123001
575 Ga0466962_0120319
576 2523386282

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

38

210

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ky8-assembly1.cif.gz_B crystal structure of putative riboflavin biosynthesis protein (yp_001092907.1) from shewanella sp. pv-4 at 2.12 a resolution 0.8568 3 184
3ky8-assembly1.cif.gz_B crystal structure of putative riboflavin biosynthesis protein (yp_001092907.1) from shewanella sp. pv-4 at 2.12 a resolution 0.8435 3 184
2gd9-assembly1.cif.gz_B crystal structure of a putative dihydrofolate reductase (bsu40760, yyap) from bacillus subtilis at 2.30 a resolution 0.8192 2 184
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8116 1 184
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8072 1 184
ID Description Score Start End Superfamily
3ky8B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8212 4 182 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8098 1 184 3.40.430.10
2gd9B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8087 3 181 3.40.430.10
3ky8B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8083 4 182 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8054 1 184 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A1H2ZNN3-F1-model_v4 Dihydrofolate reductase 0.9783 1 184 GO:0008703
GO:0009231
AF-D0LA92-F1-model_v4 Bifunctional deaminase-reductase domain protein 0.9764 25 184 GO:0008703
GO:0009231
AF-A0A7R7HWB0-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.9673 18 184 GO:0008703
GO:0009231
AF-A0A536D4N8-F1-model_v4 Deaminase 0.9639 1 149 GO:0008703
GO:0009231
AF-A0A1H2ZNN3-F1-model_v4 Dihydrofolate reductase 0.9627 1 184 GO:0008703
GO:0009231

Map