F388765

General Info

Members Datasets Scaffolds Average Seq Length
288 170 576 479

Family's Representative Sequence

Representative Sequence 3300046454|Ga0495592_0009169|Ga0495592_0009169_2554_4137
Length 527
Sequence MPFRLREKHSRISVDVERPLQKLRTVASDTVLNIQSTIVSAPRVRFAPSPTGYLHIGGARTALFNWLFARRHGGVFVLRIEDTDTERSSEEMVAGILDGLRWLGLDWDEGPMVAGPHAPYFQSQRQAKYLAVAEQLVAGGQAYYCYCTPDELKAKREGNPEYKYERTCLRLPADEISRREKTGQARAVRFRVTDGSVRVDDLVHGPIEFDASLIEDFVILRSDGHPTYHLSVVADDVEMGMTHVVRGDDHISNTPKQILLYQAMGVAVPKFAHVPLILGADKKRLSKRHGATSVMEYAGQGYIPEAMLNFLALLGWSPGAGNREVFARDELAQIFALEGISGGNAVFNPEKLDWFNQQHLARLAPEELALRLRPSFVEAGLWSDDLLTTRHAWFFAVLELLVPRAKRLTDFAPQAAFFFRDEVEFDEAAVTKHLRAEGMAATLTVLDGALTALPDFDVVSTEAALRAVAEARGIKAGALIHAVRVAVTGKTVSPGLFEVLALVGRLHVHERLDAAVRRIAVSGTGSL

Samples

Sample ID Description Type Environment
1 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
82 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
83 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
84 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
85 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
86 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
87 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
88 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
89 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
90 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
91 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
92 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
93 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
94 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
97 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
103 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
104 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
109 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
110 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
111 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
112 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
113 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
158 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
166 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
167 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.82
Nodule 0
Rhizoplane 4.86
Rhizosphere 91.32
Stem 0
Stem Tuber 0
Unclassified 0.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495592_0009169 3300046454 Bacteria 7446
2 Ga0065712_10003381 3300005290 Bacteria 5639
3 Ga0065712_10072476 3300005290 Bacteria 4741
4 Ga0065715_10102166 3300005293 Bacteria 3136
5 Ga0070676_10022939 3300005328 Bacteria 3504
6 Ga0070683_100051700 3300005329 Bacteria 3805
7 Ga0070670_100001035 3300005331 Bacteria 22011
8 Ga0070670_100026716 3300005331 Bacteria 4966
9 Ga0068869_100008490 3300005334 Bacteria 6626
10 Ga0070689_100070219 3300005340 Bacteria 2734
11 Ga0070692_10086503 3300005345 Bacteria 1697
12 Ga0070669_100095914 3300005353 Bacteria 2231
13 Ga0070675_100017253 3300005354 Bacteria 5736
14 Ga0070688_100034436 3300005365 Bacteria 3068
15 Ga0070688_100041641 3300005365 Bacteria 2821
16 Ga0070659_100063665 3300005366 Bacteria 2918
17 Ga0070709_10037730 3300005434 Bacteria 2953
18 Ga0070714_100134540 3300005435 Bacteria 2212
19 Ga0070713_100031272 3300005436 Bacteria 4239
20 Ga0070678_100027826 3300005456 Bacteria 3845
21 Ga0070678_100027835 3300005456 Bacteria 3844
22 Ga0070698_100193501 3300005471 Bacteria 1971
23 Ga0070699_100207129 3300005518 Bacteria 1745
24 Ga0070684_100117691 3300005535 Bacteria 2388
25 Ga0068853_100142268 3300005539 Bacteria 2154
26 Ga0070672_100009375 3300005543 Bacteria 6746
27 Ga0070696_100040356 3300005546 Bacteria 3223
28 Ga0070665_100038240 3300005548 Bacteria 4824
29 Ga0070665_100068116 3300005548 Bacteria 3568
30 Ga0068856_100181636 3300005614 Bacteria 2117
31 Ga0068864_100006717 3300005618 Bacteria 9426
32 Ga0068863_100053842 3300005841 Bacteria 3814
33 Ga0075365_10130316 3300006038 Bacteria 1740
34 Ga0075364_10002684 3300006051 Bacteria 9992
35 Ga0075364_10007568 3300006051 Bacteria 6456
36 Ga0070715_10035101 3300006163 Bacteria 2060
37 Ga0075362_10005757 3300006177 Bacteria 4564
38 Ga0075367_10078080 3300006178 Bacteria 1999
39 Ga0075366_10005490 3300006195 Bacteria 6872
40 Ga0097621_100054620 3300006237 Bacteria 3259
41 Ga0097621_100069469 3300006237 Bacteria 2908
42 Ga0097621_100134815 3300006237 Bacteria 2105
43 Ga0075370_10005282 3300006353 Bacteria 6397
44 Ga0068871_100002945 3300006358 Bacteria 11682
45 Ga0068871_100113951 3300006358 Bacteria 2277
46 Ga0068871_100215202 3300006358 Bacteria 1663
47 Ga0075433_10057798 3300006852 Bacteria 3391
48 Ga0075434_100004395 3300006871 Bacteria 12702
49 Ga0075434_100076260 3300006871 Bacteria 3347
50 Ga0075434_100102470 3300006871 Bacteria 2870
51 Ga0075434_100217585 3300006871 Bacteria 1930
52 Ga0068865_100027302 3300006881 Bacteria 3770
53 Ga0075436_100026574 3300006914 Bacteria 3985
54 Ga0075436_100028135 3300006914 Bacteria 3868
55 Ga0075435_100035974 3300007076 Bacteria 3932
56 Ga0075435_100038771 3300007076 Bacteria 3800
57 Ga0105240_10034773 3300009093 Bacteria 6497
58 Ga0105240_10121246 3300009093 Bacteria 3148
59 Ga0111539_10168962 3300009094 Bacteria 2556
60 Ga0105245_10008973 3300009098 Bacteria 8721
61 Ga0105245_10028033 3300009098 Bacteria 4963
62 Ga0105242_10108182 3300009176 Bacteria 2366
63 Ga0105242_10197274 3300009176 Bacteria 1786
64 Ga0105248_10010636 3300009177 Bacteria 10147
65 Ga0105248_10024746 3300009177 Bacteria 6677
66 Ga0105248_10066527 3300009177 Bacteria 4046
67 Ga0105248_10289422 3300009177 Bacteria 1845
68 Ga0105249_10002178 3300009553 Bacteria 16974
69 Ga0105239_10042210 3300010375 Bacteria 4998
70 Ga0157369_10290762 3300013105 Bacteria 1701
71 Ga0157378_10027029 3300013297 Bacteria 5062
72 Ga0157372_10211768 3300013307 Bacteria 2246
73 Ga0157375_10030972 3300013308 Bacteria 5050
74 Ga0157375_10217578 3300013308 Bacteria 2068
75 Ga0163163_10062116 3300014325 Bacteria 3701
76 Ga0157380_10013087 3300014326 Bacteria 6037
77 Ga0157376_10034643 3300014969 Bacteria 4079
78 Ga0157376_10170809 3300014969 Bacteria 1980
79 Ga0157376_10251177 3300014969 Bacteria 1652
80 Ga0163161_10022032 3300017792 Bacteria 4482
81 Ga0207697_10004595 3300025315 Bacteria 6562
82 Ga0207688_10060223 3300025901 Bacteria 2138
83 Ga0207695_10065762 3300025913 Bacteria 3727
84 Ga0207695_10071053 3300025913 Bacteria 3555
85 Ga0207657_10163107 3300025919 Bacteria 1809
86 Ga0207646_10113605 3300025922 Bacteria 2431
87 Ga0207681_10036967 3300025923 Bacteria 3225
88 Ga0207681_10154340 3300025923 Bacteria 1724
89 Ga0207650_10019066 3300025925 Bacteria 4822
90 Ga0207659_10048849 3300025926 Bacteria 2999
91 Ga0207687_10008666 3300025927 Bacteria 6646
92 Ga0207690_10116522 3300025932 Bacteria 1932
93 Ga0207686_10023459 3300025934 Bacteria 3565
94 Ga0207711_10066361 3300025941 Bacteria 3121
95 Ga0207711_10184533 3300025941 Bacteria 1898
96 Ga0207689_10017286 3300025942 Bacteria 6103
97 Ga0207651_10051923 3300025960 Bacteria 2793
98 Ga0207677_10032961 3300026023 Bacteria 3336
99 Ga0207641_10029986 3300026088 Bacteria 4502
100 Ga0207648_10007009 3300026089 Bacteria 11145
101 Ga0207676_10108640 3300026095 Bacteria 2316
102 Ga0207683_10003979 3300026121 Bacteria 12810
103 Ga0207683_10118842 3300026121 Bacteria 2371
104 Ga0207683_10122982 3300026121 Bacteria 2331
105 Ga0207428_10009057 3300027907 Bacteria 8954
106 Ga0307408_100117808 3300031548 Bacteria 2052
107 Ga0307407_10067590 3300031903 Bacteria 2113
108 Ga0307409_100051274 3300031995 Bacteria 3157
109 Ga0307411_10032692 3300032005 Bacteria 3217
110 Ga0373930_0000549 3300034816 Bacteria 5159
111 Ga0373958_0004415 3300034819 Bacteria 2083
112 Ga0373926_0020039 3300035083 Bacteria 2309
113 Ga0373934_0007459 3300035086 Bacteria 4061
114 Ga0373949_0001140 3300035090 Bacteria 7987
115 Ga0373923_0052021 3300035111 Bacteria 1720
116 Ga0373932_0000523 3300035112 Bacteria 11799
117 Ga0373941_0001443 3300035115 Bacteria 5025
118 Ga0373953_0011730 3300035117 Bacteria 3086
119 Ga0373956_0001919 3300035119 Bacteria 8588
120 Ga0373957_0012724 3300035120 Bacteria 2839
121 Ga0373960_0003434 3300035121 Bacteria 3587
122 Ga0373943_0001902 3300035170 Bacteria 9439
123 Ga0373946_0007576 3300035171 Bacteria 3973
124 Ga0373946_0061172 3300035171 Bacteria 1603
125 Ga0373955_0001904 3300035172 Bacteria 9007
126 Ga0373955_0084596 3300035172 Bacteria 1799
127 Ga0373962_0004430 3300035242 Bacteria 3392
128 Ga0373924_0017735 3300035410 Bacteria 2735
129 Ga0373933_0067722 3300035724 Bacteria 2167
130 Ga0373947_0009105 3300035725 Bacteria 5706
131 Ga0373937_0000324 3300036401 Bacteria 45295
132 Ga0373925_0026499 3300037068 Bacteria 4241
133 Ga0450896_000782 3300042133 Bacteria 3578
134 Ga0439446_0007024 3300042156 Bacteria 2950
135 Ga0466963_0053406 3300044694 Bacteria 2683
136 Ga0451576_0044637 3300045051 Bacteria 4671
137 Ga0495651_0030819 3300046462 Bacteria 4182
138 Ga0495653_0132052 3300046463 Bacteria 1766
139 Ga0495608_0022005 3300046511 Bacteria 4372
140 Ga0495618_0123199 3300046514 Bacteria 1660
141 Ga0495628_0016805 3300046516 Bacteria 6096
142 Ga0495586_0059974 3300046535 Bacteria 2068
143 Ga0495587_0039407 3300046536 Bacteria 2828
144 Ga0495669_0007605 3300046684 Bacteria 4546
145 Ga0495613_0000790 3300046689 Bacteria 24652
146 Ga0495680_0199093 3300047322 Bacteria 1437
147 Ga0495684_0009017 3300047471 Bacteria 7701
148 Ga0496101_0001227 3300048904 Bacteria 15355
149 Ga0496101_0086840 3300048904 Bacteria 2321
150 Ga0496102_0178816 3300048905 Bacteria 1998
151 Ga0496104_0075058 3300048907 Bacteria 3219
152 Ga0496105_0080978 3300048908 Bacteria 2682
153 Ga0496106_0075071 3300048909 Bacteria 2589
154 Ga0496109_0028954 3300048912 Bacteria 4959
155 Ga0496110_0060035 3300048913 Bacteria 3353
156 Ga0496111_0043561 3300048914 Bacteria 3226
157 Ga0496112_0024310 3300048915 Bacteria 5799
158 Ga0496112_0167765 3300048915 Bacteria 2161
159 Ga0496113_0008420 3300048916 Bacteria 6721
160 Ga0496114_0009299 3300048917 Bacteria 7800
161 Ga0496114_0179989 3300048917 Bacteria 1846
162 Ga0501031_0003410 3300049568 Bacteria 10199
163 Ga0501031_0065366 3300049568 Bacteria 2369
164 Ga0501031_0144505 3300049568 Bacteria 1554
165 Ga0501032_0004840 3300049569 Bacteria 10093
166 Ga0501032_0011900 3300049569 Bacteria 6232
167 Ga0501032_0014854 3300049569 Bacteria 5509
168 Ga0501033_0000785 3300049570 Bacteria 29094
169 Ga0501033_0004983 3300049570 Bacteria 10558
170 Ga0501033_0008342 3300049570 Bacteria 8022
171 Ga0501034_0014055 3300049571 Bacteria 8245
172 Ga0501034_0017430 3300049571 Bacteria 7365
173 Ga0501034_0032220 3300049571 Bacteria 5324
174 Ga0501034_0077841 3300049571 Bacteria 3321
175 Ga0501034_0103084 3300049571 Bacteria 2846
176 Ga0501034_0185898 3300049571 Bacteria 2041
177 Ga0501034_0254921 3300049571 Bacteria 1698
178 Ga0501036_0004355 3300049572 Bacteria 11420
179 Ga0501036_0005151 3300049572 Bacteria 10566
180 Ga0501036_0017226 3300049572 Bacteria 6038
181 Ga0501036_0030549 3300049572 Bacteria 4549
182 Ga0501037_0004136 3300049573 Bacteria 10529
183 Ga0501037_0031022 3300049573 Bacteria 3946
184 Ga0501037_0079405 3300049573 Bacteria 2381
185 Ga0501037_0107896 3300049573 Bacteria 2006
186 Ga0501038_0005629 3300049574 Bacteria 11627
187 Ga0501038_0008983 3300049574 Bacteria 9169
188 Ga0501038_0047385 3300049574 Bacteria 3723
189 Ga0501038_0094795 3300049574 Bacteria 2494
190 Ga0501039_0001961 3300049575 Bacteria 15267
191 Ga0501039_0014059 3300049575 Bacteria 6126
192 Ga0501039_0047146 3300049575 Bacteria 3330
193 Ga0501042_0006770 3300049578 Bacteria 7469
194 Ga0501043_0009166 3300049579 Bacteria 7781
195 Ga0501043_0011413 3300049579 Bacteria 6957
196 Ga0501043_0013456 3300049579 Bacteria 6399
197 Ga0501043_0034700 3300049579 Bacteria 3967
198 Ga0501043_0131257 3300049579 Bacteria 1963
199 Ga0501043_0142497 3300049579 Bacteria 1876
200 Ga0501046_0002288 3300049580 Bacteria 18063
201 Ga0501046_0003903 3300049580 Bacteria 13639
202 Ga0501046_0019965 3300049580 Bacteria 5547
203 Ga0501047_0000328 3300049581 Bacteria 54774
204 Ga0501047_0004899 3300049581 Bacteria 12574
205 Ga0501047_0010352 3300049581 Bacteria 8822
206 Ga0501047_0020525 3300049581 Bacteria 6343
207 Ga0501047_0033648 3300049581 Bacteria 4946
208 Ga0501047_0145252 3300049581 Bacteria 2249
209 Ga0501048_0006543 3300049582 Bacteria 8857
210 Ga0501048_0008273 3300049582 Bacteria 7869
211 Ga0501048_0019390 3300049582 Bacteria 4991
212 Ga0501048_0066689 3300049582 Bacteria 2544
213 Ga0501048_0102122 3300049582 Bacteria 2023
214 Ga0501067_0002626 3300049583 Bacteria 9949
215 Ga0501067_0010049 3300049583 Bacteria 5238
216 Ga0501067_0021421 3300049583 Bacteria 3577
217 Ga0501067_0045179 3300049583 Bacteria 2446
218 Ga0501068_0002062 3300049584 Bacteria 10709
219 Ga0501068_0006910 3300049584 Bacteria 6277
220 Ga0501068_0057441 3300049584 Bacteria 2359
221 Ga0501069_0002359 3300049585 Bacteria 9568
222 Ga0501069_0003936 3300049585 Bacteria 7658
223 Ga0501070_0023877 3300049586 Bacteria 5124
224 Ga0501070_0066999 3300049586 Bacteria 2973
225 Ga0501070_0171407 3300049586 Bacteria 1787
226 Ga0501071_0009366 3300049587 Bacteria 6521
227 Ga0501072_0014052 3300049588 Bacteria 6136
228 Ga0501072_0022610 3300049588 Bacteria 4877
229 Ga0501072_0033949 3300049588 Bacteria 3997
230 Ga0501072_0034244 3300049588 Bacteria 3980
231 Ga0501073_0006775 3300049589 Bacteria 8528
232 Ga0501073_0008881 3300049589 Bacteria 7430
233 Ga0501073_0015912 3300049589 Bacteria 5451
234 Ga0501074_0001910 3300049590 Bacteria 14317
235 Ga0501074_0003088 3300049590 Bacteria 11745
236 Ga0501074_0016262 3300049590 Bacteria 5402
237 Ga0501074_0016425 3300049590 Bacteria 5375
238 Ga0501076_0078602 3300049592 Bacteria 2647
239 Ga0501076_0232178 3300049592 Bacteria 1508
240 Ga0501079_0002865 3300049741 Bacteria 12581
241 Ga0501079_0061139 3300049741 Bacteria 2905
242 Ga0501080_0009106 3300049742 Bacteria 9037
243 Ga0501080_0015435 3300049742 Bacteria 7041
244 Ga0501080_0070166 3300049742 Bacteria 3258
245 Ga0501080_0188898 3300049742 Bacteria 1893
246 Ga0501080_0191237 3300049742 Bacteria 1880
247 Ga0501081_0005620 3300049743 Bacteria 8103
248 Ga0501081_0081327 3300049743 Bacteria 2269
249 Ga0501083_0008397 3300049744 Bacteria 7302
250 Ga0501083_0008905 3300049744 Bacteria 7088
251 Ga0501083_0027738 3300049744 Bacteria 3905
252 Ga0501083_0068288 3300049744 Bacteria 2365
253 Ga0501035_0023660 3300049822 Bacteria 5636
254 Ga0501035_0039843 3300049822 Bacteria 4249
255 Ga0501035_0048210 3300049822 Bacteria 3820
256 Ga0501035_0111491 3300049822 Bacteria 2397
257 Ga0501044_0010648 3300049823 Bacteria 9978
258 Ga0501044_0028329 3300049823 Bacteria 5912
259 Ga0501044_0029366 3300049823 Bacteria 5798
260 Ga0501044_0032038 3300049823 Bacteria 5526
261 Ga0501044_0038867 3300049823 Bacteria 4968
262 Ga0501045_0014952 3300049824 Bacteria 5507
263 Ga0501045_0020294 3300049824 Bacteria 4746
264 nmdc:mga03683_19329_c1 3300050489 Bacteria 2600
265 nmdc:mga00v17_24948_c1 3300050491 Bacteria 3471
266 nmdc:mga0k408_1420_c1 3300050493 Bacteria 12959
267 nmdc:mga0k408_17463_c1 3300050493 Bacteria 3998
268 nmdc:mga09592_176617_c1 3300050508 Bacteria 1847
269 nmdc:mga08y16_176027_c1 3300050511 Bacteria 2221
270 nmdc:mga08y16_267811_c1 3300050511 Bacteria 1764
271 nmdc:mga08y16_31024_c1 3300050511 Bacteria 5621
272 nmdc:mga08y16_338337_c1 3300050511 Unclassified 1547
273 nmdc:mga0n895_124319_c1 3300050512 Bacteria 2603
274 nmdc:mga0n895_5432_c1 3300050512 Bacteria 10650
275 nmdc:mga0rr50_9536_c1 3300050513 Bacteria 6109
276 nmdc:mga08x19_51185_c1 3300050514 Bacteria 2653
277 Ga0495601_0006664 3300053077 Bacteria 6760
278 Ga0495595_0003932 3300053084 Bacteria 5936
279 Ga0495619_0009455 3300053085 Bacteria 6149
280 Ga0495619_0015231 3300053085 Bacteria 4862
281 Ga0501084_0001478 3300054114 Bacteria 18672
282 Ga0501084_0013818 3300054114 Bacteria 6683
283 Ga0501084_0037674 3300054114 Bacteria 4041
284 Ga0501084_0066846 3300054114 Bacteria 3008
285 Ga0501082_0002643 3300060353 Bacteria 15675
286 Ga0501082_0008471 3300060353 Bacteria 8868
287 Ga0501082_0160483 3300060353 Bacteria 1954
288 Ga0530510_0107293 3300061734 Bacteria 2044
289 Ga0495592_0009169
290 Ga0065712_10003381
291 Ga0065712_10072476
292 Ga0065715_10102166
293 Ga0070676_10022939
294 Ga0070683_100051700
295 Ga0070670_100001035
296 Ga0070670_100026716
297 Ga0068869_100008490
298 Ga0070689_100070219
299 Ga0070692_10086503
300 Ga0070669_100095914
301 Ga0070675_100017253
302 Ga0070688_100034436
303 Ga0070688_100041641
304 Ga0070659_100063665
305 Ga0070709_10037730
306 Ga0070714_100134540
307 Ga0070713_100031272
308 Ga0070678_100027826
309 Ga0070678_100027835
310 Ga0070698_100193501
311 Ga0070699_100207129
312 Ga0070684_100117691
313 Ga0068853_100142268
314 Ga0070672_100009375
315 Ga0070696_100040356
316 Ga0070665_100038240
317 Ga0070665_100068116
318 Ga0068856_100181636
319 Ga0068864_100006717
320 Ga0068863_100053842
321 Ga0075365_10130316
322 Ga0075364_10002684
323 Ga0075364_10007568
324 Ga0070715_10035101
325 Ga0075362_10005757
326 Ga0075367_10078080
327 Ga0075366_10005490
328 Ga0097621_100054620
329 Ga0097621_100069469
330 Ga0097621_100134815
331 Ga0075370_10005282
332 Ga0068871_100002945
333 Ga0068871_100113951
334 Ga0068871_100215202
335 Ga0075433_10057798
336 Ga0075434_100004395
337 Ga0075434_100076260
338 Ga0075434_100102470
339 Ga0075434_100217585
340 Ga0068865_100027302
341 Ga0075436_100026574
342 Ga0075436_100028135
343 Ga0075435_100035974
344 Ga0075435_100038771
345 Ga0105240_10034773
346 Ga0105240_10121246
347 Ga0111539_10168962
348 Ga0105245_10008973
349 Ga0105245_10028033
350 Ga0105242_10108182
351 Ga0105242_10197274
352 Ga0105248_10010636
353 Ga0105248_10024746
354 Ga0105248_10066527
355 Ga0105248_10289422
356 Ga0105249_10002178
357 Ga0105239_10042210
358 Ga0157369_10290762
359 Ga0157378_10027029
360 Ga0157372_10211768
361 Ga0157375_10030972
362 Ga0157375_10217578
363 Ga0163163_10062116
364 Ga0157380_10013087
365 Ga0157376_10034643
366 Ga0157376_10170809
367 Ga0157376_10251177
368 Ga0163161_10022032
369 Ga0207697_10004595
370 Ga0207688_10060223
371 Ga0207695_10065762
372 Ga0207695_10071053
373 Ga0207657_10163107
374 Ga0207646_10113605
375 Ga0207681_10036967
376 Ga0207681_10154340
377 Ga0207650_10019066
378 Ga0207659_10048849
379 Ga0207687_10008666
380 Ga0207690_10116522
381 Ga0207686_10023459
382 Ga0207711_10066361
383 Ga0207711_10184533
384 Ga0207689_10017286
385 Ga0207651_10051923
386 Ga0207677_10032961
387 Ga0207641_10029986
388 Ga0207648_10007009
389 Ga0207676_10108640
390 Ga0207683_10003979
391 Ga0207683_10118842
392 Ga0207683_10122982
393 Ga0207428_10009057
394 Ga0307408_100117808
395 Ga0307407_10067590
396 Ga0307409_100051274
397 Ga0307411_10032692
398 Ga0373930_0000549
399 Ga0373958_0004415
400 Ga0373926_0020039
401 Ga0373934_0007459
402 Ga0373949_0001140
403 Ga0373923_0052021
404 Ga0373932_0000523
405 Ga0373941_0001443
406 Ga0373953_0011730
407 Ga0373956_0001919
408 Ga0373957_0012724
409 Ga0373960_0003434
410 Ga0373943_0001902
411 Ga0373946_0007576
412 Ga0373946_0061172
413 Ga0373955_0001904
414 Ga0373955_0084596
415 Ga0373962_0004430
416 Ga0373924_0017735
417 Ga0373933_0067722
418 Ga0373947_0009105
419 Ga0373937_0000324
420 Ga0373925_0026499
421 Ga0450896_000782
422 Ga0439446_0007024
423 Ga0466963_0053406
424 Ga0451576_0044637
425 Ga0495651_0030819
426 Ga0495653_0132052
427 Ga0495608_0022005
428 Ga0495618_0123199
429 Ga0495628_0016805
430 Ga0495586_0059974
431 Ga0495587_0039407
432 Ga0495669_0007605
433 Ga0495613_0000790
434 Ga0495680_0199093
435 Ga0495684_0009017
436 Ga0496101_0001227
437 Ga0496101_0086840
438 Ga0496102_0178816
439 Ga0496104_0075058
440 Ga0496105_0080978
441 Ga0496106_0075071
442 Ga0496109_0028954
443 Ga0496110_0060035
444 Ga0496111_0043561
445 Ga0496112_0024310
446 Ga0496112_0167765
447 Ga0496113_0008420
448 Ga0496114_0009299
449 Ga0496114_0179989
450 Ga0501031_0003410
451 Ga0501031_0065366
452 Ga0501031_0144505
453 Ga0501032_0004840
454 Ga0501032_0011900
455 Ga0501032_0014854
456 Ga0501033_0000785
457 Ga0501033_0004983
458 Ga0501033_0008342
459 Ga0501034_0014055
460 Ga0501034_0017430
461 Ga0501034_0032220
462 Ga0501034_0077841
463 Ga0501034_0103084
464 Ga0501034_0185898
465 Ga0501034_0254921
466 Ga0501036_0004355
467 Ga0501036_0005151
468 Ga0501036_0017226
469 Ga0501036_0030549
470 Ga0501037_0004136
471 Ga0501037_0031022
472 Ga0501037_0079405
473 Ga0501037_0107896
474 Ga0501038_0005629
475 Ga0501038_0008983
476 Ga0501038_0047385
477 Ga0501038_0094795
478 Ga0501039_0001961
479 Ga0501039_0014059
480 Ga0501039_0047146
481 Ga0501042_0006770
482 Ga0501043_0009166
483 Ga0501043_0011413
484 Ga0501043_0013456
485 Ga0501043_0034700
486 Ga0501043_0131257
487 Ga0501043_0142497
488 Ga0501046_0002288
489 Ga0501046_0003903
490 Ga0501046_0019965
491 Ga0501047_0000328
492 Ga0501047_0004899
493 Ga0501047_0010352
494 Ga0501047_0020525
495 Ga0501047_0033648
496 Ga0501047_0145252
497 Ga0501048_0006543
498 Ga0501048_0008273
499 Ga0501048_0019390
500 Ga0501048_0066689
501 Ga0501048_0102122
502 Ga0501067_0002626
503 Ga0501067_0010049
504 Ga0501067_0021421
505 Ga0501067_0045179
506 Ga0501068_0002062
507 Ga0501068_0006910
508 Ga0501068_0057441
509 Ga0501069_0002359
510 Ga0501069_0003936
511 Ga0501070_0023877
512 Ga0501070_0066999
513 Ga0501070_0171407
514 Ga0501071_0009366
515 Ga0501072_0014052
516 Ga0501072_0022610
517 Ga0501072_0033949
518 Ga0501072_0034244
519 Ga0501073_0006775
520 Ga0501073_0008881
521 Ga0501073_0015912
522 Ga0501074_0001910
523 Ga0501074_0003088
524 Ga0501074_0016262
525 Ga0501074_0016425
526 Ga0501076_0078602
527 Ga0501076_0232178
528 Ga0501079_0002865
529 Ga0501079_0061139
530 Ga0501080_0009106
531 Ga0501080_0015435
532 Ga0501080_0070166
533 Ga0501080_0188898
534 Ga0501080_0191237
535 Ga0501081_0005620
536 Ga0501081_0081327
537 Ga0501083_0008397
538 Ga0501083_0008905
539 Ga0501083_0027738
540 Ga0501083_0068288
541 Ga0501035_0023660
542 Ga0501035_0039843
543 Ga0501035_0048210
544 Ga0501035_0111491
545 Ga0501044_0010648
546 Ga0501044_0028329
547 Ga0501044_0029366
548 Ga0501044_0032038
549 Ga0501044_0038867
550 Ga0501045_0014952
551 Ga0501045_0020294
552 nmdc:mga03683_19329_c1
553 nmdc:mga00v17_24948_c1
554 nmdc:mga0k408_1420_c1
555 nmdc:mga0k408_17463_c1
556 nmdc:mga09592_176617_c1
557 nmdc:mga08y16_176027_c1
558 nmdc:mga08y16_267811_c1
559 nmdc:mga08y16_31024_c1
560 nmdc:mga08y16_338337_c1
561 nmdc:mga0n895_124319_c1
562 nmdc:mga0n895_5432_c1
563 nmdc:mga0rr50_9536_c1
564 nmdc:mga08x19_51185_c1
565 Ga0495601_0006664
566 Ga0495595_0003932
567 Ga0495619_0009455
568 Ga0495619_0015231
569 Ga0501084_0001478
570 Ga0501084_0013818
571 Ga0501084_0037674
572 Ga0501084_0066846
573 Ga0501082_0002643
574 Ga0501082_0008471
575 Ga0501082_0160483
576 Ga0530510_0107293

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

42

354

0.98

PF19269

Anticodon_2

Anticodon binding domain

362

516

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1g59-assembly1.cif.gz_A glutamyl-trna synthetase complexed with trna(glu). 0.9018 1 467
3pny-assembly1.cif.gz_B structure of glutamyl-trna synthetase from mycobacterium tuberculosis in space group p21 0.9004 1 468
3afh-assembly1.cif.gz_A crystal structure of thermotoga maritima nondiscriminating glutamyl-trna synthetase in complex with a glutamyl-amp analog 0.8973 1 471
1g59-assembly1.cif.gz_A glutamyl-trna synthetase complexed with trna(glu). 0.8963 1 467
2cv1-assembly1.cif.gz_A glutamyl-trna synthetase from thermus thermophilus in complex with trna(glu), atp, and an analog of l-glutamate: a quaternary complex 0.895 1 467
ID Description Score Start End Superfamily
af_Q9FEA2_46_378_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9632 2 312 3.40.50.620
4griB03 Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 0.9551 231 314 1.10.1160.10
af_A0A1D6QP66_1_118_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9542 121 225 3.40.50.620
af_Q8IDD3_74_404_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9523 1 314 3.40.50.620
5h4vC03 Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 0.9477 236 312 1.10.1160.10
ID Description Score Start End GO Terms
AF-A0A453N1M4-F1-model_v4 glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) 0.9753 8 282 GO:0004818
GO:0005524
GO:0005739
GO:0006424
GO:0008270
AF-X0TFX8-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.9712 55 315 GO:0004818
GO:0005524
GO:0005739
GO:0006424
GO:0008270
AF-J9FFE9-F1-model_v4 Glutamate--tRNA ligase 0.9679 127 310 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A2V8I1D8-F1-model_v4 Aminoacyl-tRNA synthetase class I anticodon-binding domain-containing protein 0.9663 350 473 GO:0000049
GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A5J5WR89-F1-model_v4 glutamate--tRNA ligase (EC 6.1.1.17) (Glutamyl-tRNA synthetase) 0.9638 2 303 GO:0004818
GO:0005524
GO:0005739
GO:0006424
GO:0008270
GO:0009791
GO:0048608

Map