F388753

General Info

Members Datasets Scaffolds Average Seq Length
288 197 269 342

Family's Representative Sequence

Representative Sequence 3300044842|Ga0466957_0010692|Ga0466957_0010692_3590_4726
Length 378
Sequence VNRFQLFIYSCDLQSIAYHRQGVKHKYLTKKIMVRIANILLPDFPLLLAPMEDVSDPPFRFVCKQNGADLMYSEFISSEGLIRDAIKSKQKLDFNEFERPFGIQIFGGDEEAMALSARIVDTVQPDLVDINFGCPVKKVVSKGAGAAVLKDVDAMVRLTAAVVKSTTLPVTVKTRLGWDDNSKNIEEVAERLQDVGIKALTIHGRTRAQLYKGEADWTLIAAVKNNPRIHIPIFGNGDIDTPQKALLYKNRYGVDGVMIGRAAIGYPWIFREIKHYLQTGDMLPLPTIEERVEVCRTHAHKSIEWKGEIVGILEMRRHYSNYLKGLPHVKDFRNRLVTVKTLAEVDEILNEVKEKFAGIILERQVIPLSEDQQPACAV

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
3 2818991444 Filimonas endophytica 3197 Isolate Unclassified
4 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
5 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
6 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
7 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
8 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
9 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
10 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
11 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
12 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
13 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
14 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
15 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
16 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
17 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
18 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
19 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
20 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
21 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
22 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
23 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
24 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
25 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
26 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
27 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
28 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
29 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
30 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
31 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
32 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
33 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
34 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
35 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
36 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
37 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
38 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
39 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
40 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
41 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
42 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
43 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
44 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
52 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
82 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
83 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
84 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
85 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
87 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
88 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
90 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
91 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
125 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
126 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
127 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
128 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
131 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
132 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
133 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
134 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
135 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
136 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
137 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
138 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
139 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
140 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
141 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
142 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
143 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
144 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
145 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
146 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
147 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
148 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
149 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
150 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
151 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
152 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
158 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
159 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
165 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
166 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
170 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
174 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
177 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
178 3300053089 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 endosphere Metagenome Endosphere
179 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
180 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
181 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
182 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
183 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
184 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
185 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
186 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
187 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
188 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
189 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
190 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
191 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
194 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
195 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
196 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
197 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.06
Metatranscriptomes 0
Isolates 6.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.1
Nodule 0
Rhizoplane 1.04
Rhizosphere 65.97
Stem 0
Stem Tuber 0
Unclassified 13.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10010133 3300001979 Bacteria 3646
2 JGI24739J22299_10018980 3300001989 Bacteria 2466
3 JGI25154J39366_1000002 3300002738 Bacteria 466942
4 JGI25154J39366_1000078 3300002738 Bacteria 90241
5 JGI25157J39369_1001797 3300002741 Bacteria 6893
6 JGI25153J46596_10003299 3300003215 Bacteria 9064
7 rootH2_10128092 3300003320 Bacteria 2106
8 rootL2_10008865 3300003322 Bacteria 21299
9 rootL2_10026021 3300003322 Bacteria 20401
10 rootL2_10048900 3300003322 Bacteria 2172
11 rootL2_10051414 3300003322 Bacteria 7429
12 rootL2_10057063 3300003322 Bacteria 6670
13 rootL2_10080735 3300003322 Bacteria 1274
14 rootL2_10190497 3300003322 Bacteria 6365
15 rootH1_10013458 3300003316 Bacteria 8685
16 rootH1_10013458 3300003323 Bacteria 9160
17 JGI25160J50197_1005416 3300003354 Bacteria 5314
18 JGI25160J50197_1008370 3300003354 Bacteria 3947
19 Ga0055542_1004946 3300003762 Bacteria 3100
20 Ga0055542_1005064 3300003762 Bacteria 3044
21 Ga0055531_10000895 3300003794 Bacteria 24374
22 Ga0065165_1025519 3300005262 Bacteria 1963
23 Ga0070658_10000563 3300005327 Bacteria 32232
24 Ga0070676_10000218 3300005328 Bacteria 24620
25 Ga0070677_10042456 3300005333 Bacteria 1801
26 Ga0070666_10000969 3300005335 Bacteria 17521
27 Ga0070682_100002600 3300005337 Bacteria 9974
28 Ga0068868_100000770 3300005338 Bacteria 21666
29 Ga0070691_10002629 3300005341 Bacteria 8003
30 Ga0070668_100000110 3300005347 Bacteria 50766
31 Ga0070669_100012698 3300005353 Bacteria 5979
32 Ga0070673_100000676 3300005364 Bacteria 18803
33 Ga0070673_100319725 3300005364 Bacteria 1371
34 Ga0070667_100000867 3300005367 Bacteria 28069
35 Ga0070667_100290224 3300005367 Bacteria 1471
36 Ga0070663_100133112 3300005455 Unclassified 1890
37 Ga0070662_100228313 3300005457 Unclassified 1488
38 Ga0068867_100003758 3300005459 Bacteria 10690
39 Ga0068853_100003579 3300005539 Bacteria 11897
40 Ga0068853_100014219 3300005539 Bacteria 6513
41 Ga0070672_100000020 3300005543 Bacteria 69277
42 Ga0070693_100046374 3300005547 Bacteria 2468
43 Ga0070665_100000318 3300005548 Bacteria 74326
44 Ga0068855_100024105 3300005563 Bacteria 7284
45 Ga0068855_100030726 3300005563 Bacteria 6422
46 Ga0068855_100058401 3300005563 Unclassified 4518
47 Ga0068855_100068771 3300005563 Unclassified 4122
48 Ga0068857_100002998 3300005577 Bacteria 13931
49 Ga0068856_100008593 3300005614 Bacteria 9930
50 Ga0068856_100080480 3300005614 Bacteria 3231
51 Ga0068856_100098986 3300005614 Unclassified 2907
52 Ga0068852_100004000 3300005616 Bacteria 10363
53 Ga0068852_100004838 3300005616 Bacteria 9569
54 Ga0068852_100022208 3300005616 Bacteria 5085
55 Ga0068859_100464468 3300005617 Bacteria 1361
56 Ga0068864_100000934 3300005618 Bacteria 24494
57 Ga0068851_10000637 3300005834 Bacteria 14933
58 Ga0068863_100000678 3300005841 Bacteria 34425
59 Ga0068858_100001487 3300005842 Bacteria 24140
60 Ga0068860_100001650 3300005843 Bacteria 23869
61 Ga0075366_10002122 3300006195 Bacteria 10083
62 Ga0075366_10027380 3300006195 Bacteria 3344
63 Ga0068871_100001813 3300006358 Bacteria 14409
64 Ga0068865_100000289 3300006881 Bacteria 27735
65 Ga0097620_100464474 3300006931 Bacteria 1361
66 Ga0105240_10038623 3300009093 Bacteria 6122
67 Ga0114129_10003677 3300009147 Bacteria 21578
68 Ga0114129_10004777 3300009147 Bacteria 19148
69 Ga0105243_10396973 3300009148 Unclassified 1280
70 Ga0105241_10001839 3300009174 Bacteria 16088
71 Ga0105241_10008421 3300009174 Bacteria 7584
72 Ga0105242_10208467 3300009176 Bacteria 1740
73 Ga0105248_10004712 3300009177 Bacteria 15092
74 Ga0105237_10027333 3300009545 Bacteria 5825
75 Ga0105237_10066445 3300009545 Bacteria 3601
76 Ga0105238_10063840 3300009551 Bacteria 3683
77 Ga0105238_10066991 3300009551 Unclassified 3592
78 Ga0105249_10011326 3300009553 Bacteria 7829
79 Ga0105239_10000456 3300010375 Bacteria 59689
80 Ga0105239_10000713 3300010375 Bacteria 47121
81 Ga0105239_10003267 3300010375 Bacteria 20002
82 Ga0105239_10105132 3300010375 Bacteria 3126
83 Ga0105239_10285638 3300010375 Bacteria 1858
84 Ga0157373_10000927 3300013100 Bacteria 22674
85 Ga0157373_10027828 3300013100 Bacteria 4079
86 Ga0157369_10023841 3300013105 Bacteria 6813
87 Ga0157374_10001355 3300013296 Bacteria 20853
88 Ga0157378_10010860 3300013297 Bacteria 7964
89 Ga0163162_10001474 3300013306 Bacteria 21898
90 Ga0163162_10022454 3300013306 Bacteria 6216
91 Ga0163162_10109908 3300013306 Unclassified 2854
92 Ga0157372_10006174 3300013307 Bacteria 12740
93 Ga0157372_10015151 3300013307 Bacteria 8252
94 Ga0157372_10162312 3300013307 Unclassified 2583
95 Ga0157375_10001533 3300013308 Bacteria 19889
96 Ga0157375_10022119 3300013308 Bacteria 5848
97 Ga0163163_10000963 3300014325 Bacteria 24470
98 Ga0163163_10317983 3300014325 Bacteria 1610
99 Ga0157380_10198108 3300014326 Bacteria 1779
100 Ga0157379_10000115 3300014968 Bacteria 55499
101 Ga0157376_10000739 3300014969 Bacteria 21229
102 Ga0157376_10101839 3300014969 Unclassified 2511
103 Ga0157376_10208760 3300014969 Bacteria 1802
104 Ga0182005_1000347 3300015265 Bacteria 26332
105 Ga0163161_10017400 3300017792 Bacteria 5030
106 Ga0213876_10000680 3300021384 Bacteria 24189
107 Ga0209436_100989 3300025208 Bacteria 10961
108 Ga0209436_101020 3300025208 Bacteria 10729
109 Ga0209258_100116 3300025242 Bacteria 190317
110 Ga0209258_100315 3300025242 Bacteria 75151
111 Ga0209646_1000004 3300025246 Bacteria 786587
112 Ga0209646_1000005 3300025246 Bacteria 717627
113 Ga0209646_1000712 3300025246 Bacteria 11902
114 Ga0209026_1000136 3300025250 Bacteria 116507
115 Ga0209026_1000154 3300025250 Bacteria 108964
116 Ga0209148_1000175 3300025254 Bacteria 129536
117 Ga0209148_1000322 3300025254 Bacteria 66549
118 Ga0209130_1003198 3300025284 Bacteria 7231
119 Ga0209758_1006380 3300025297 Bacteria 8514
120 Ga0209758_1024939 3300025297 Bacteria 2643
121 Ga0207426_1000024 3300025302 Bacteria 534075
122 Ga0207426_1000139 3300025302 Bacteria 195835
123 Ga0207426_1000150 3300025302 Bacteria 186352
124 Ga0207426_1001807 3300025302 Bacteria 15872
125 Ga0209257_1000004 3300025304 Bacteria 1678347
126 Ga0209257_1000013 3300025304 Bacteria 1047305
127 Ga0207656_10000963 3300025321 Bacteria 9420
128 Ga0207682_10003730 3300025893 Bacteria 6556
129 Ga0207680_10001579 3300025903 Bacteria 10735
130 Ga0207647_10040629 3300025904 Unclassified 2928
131 Ga0207645_10001052 3300025907 Bacteria 22849
132 Ga0207705_10001524 3300025909 Bacteria 18386
133 Ga0207654_10071038 3300025911 Bacteria 2068
134 Ga0207707_10000747 3300025912 Bacteria 32068
135 Ga0207695_10000077 3300025913 Bacteria 307107
136 Ga0207695_10049731 3300025913 Unclassified 4415
137 Ga0207695_10052129 3300025913 Bacteria 4289
138 Ga0207660_10002113 3300025917 Bacteria 13186
139 Ga0207652_10002726 3300025921 Bacteria 14817
140 Ga0207681_10018800 3300025923 Bacteria 4359
141 Ga0207681_10045932 3300025923 Bacteria 2936
142 Ga0207694_10049164 3300025924 Unclassified 3264
143 Ga0207704_10026164 3300025938 Unclassified 3197
144 Ga0207691_10000673 3300025940 Bacteria 33764
145 Ga0207691_10161290 3300025940 Bacteria 1967
146 Ga0207711_10115078 3300025941 Unclassified 2396
147 Ga0207667_10012408 3300025949 Bacteria 9821
148 Ga0207667_10015552 3300025949 Bacteria 8636
149 Ga0207667_10053342 3300025949 Unclassified 4255
150 Ga0207651_10003454 3300025960 Bacteria 7766
151 Ga0207668_10000344 3300025972 Bacteria 30213
152 Ga0207658_10002261 3300025986 Bacteria 14251
153 Ga0207658_10224604 3300025986 Bacteria 1582
154 Ga0207677_10001511 3300026023 Bacteria 12283
155 Ga0207703_10002925 3300026035 Bacteria 14532
156 Ga0207639_10010437 3300026041 Bacteria 6435
157 Ga0207639_10070120 3300026041 Bacteria 2737
158 Ga0207678_10161692 3300026067 Unclassified 1912
159 Ga0207641_10002528 3300026088 Bacteria 16844
160 Ga0207648_10004291 3300026089 Bacteria 14693
161 Ga0207648_10229745 3300026089 Unclassified 1650
162 Ga0207676_10004844 3300026095 Bacteria 9539
163 Ga0207674_10006517 3300026116 Bacteria 13723
164 Ga0207674_10317430 3300026116 Bacteria 1507
165 Ga0207698_10025615 3300026142 Unclassified 4158
166 Ga0207698_10050196 3300026142 Unclassified 3181
167 Ga0268266_10002881 3300028379 Bacteria 17872
168 Ga0268264_10004052 3300028381 Bacteria 12539
169 Ga0268264_10007983 3300028381 Bacteria 8806
170 Ga0265324_10037569 3300029957 Bacteria 1682
171 Ga0307513_10153963 3300031456 Bacteria 2202
172 Ga0307513_10213607 3300031456 Bacteria 1758
173 Ga0307509_10016901 3300031507 Bacteria 8417
174 Ga0307516_10003458 3300031730 Bacteria 20249
175 Ga0373924_0063514 3300035410 Bacteria 1549
176 Ga0373937_0195910 3300036401 Bacteria 1899
177 Ga0373937_0353014 3300036401 Bacteria 1393
178 Ga0436365_1468940 3300039437 Bacteria 37650
179 Ga0439436_0009285 3300041404 Bacteria 3014
180 Ga0439431_0001808 3300041997 Bacteria 4731
181 Ga0439431_0012719 3300041997 Bacteria 1937
182 Ga0439449_0015256 3300042007 Bacteria 2886
183 Ga0439457_000748 3300042014 Bacteria 9679
184 Ga0439457_009573 3300042014 Bacteria 2252
185 Ga0439462_0005853 3300042015 Bacteria 3044
186 Ga0450899_008024 3300042135 Bacteria 1153
187 Ga0451577_0026427 3300042876 Bacteria 5259
188 Ga0466969_0000687 3300044656 Bacteria 18406
189 Ga0466972_0000023 3300044658 Bacteria 192679
190 Ga0466972_0000082 3300044658 Bacteria 88592
191 Ga0466972_0069538 3300044658 Bacteria 1681
192 Ga0466972_0090916 3300044658 Bacteria 1448
193 Ga0466966_0000015 3300044684 Bacteria 127402
194 Ga0466966_0000573 3300044684 Bacteria 23430
195 Ga0453684_0011435 3300044712 Bacteria 14889
196 Ga0466970_0105104 3300044765 Bacteria 1540
197 Ga0466957_0001007 3300044842 Bacteria 14506
198 Ga0466957_0010692 3300044842 Bacteria 5276
199 Ga0466959_0000030 3300045049 Bacteria 111343
200 Ga0466959_0000143 3300045049 Bacteria 46604
201 Ga0466959_0009265 3300045049 Bacteria 6997
202 Ga0495606_0042820 3300046507 Bacteria 3025
203 Ga0495630_0123373 3300046517 Bacteria 1966
204 Ga0495633_0000116 3300046558 Bacteria 108667
205 Ga0495668_0000099 3300046616 Bacteria 137915
206 Ga0495668_0009844 3300046616 Bacteria 5834
207 Ga0495668_0064682 3300046616 Bacteria 2013
208 Ga0495611_0000528 3300046648 Bacteria 22590
209 Ga0495635_0149440 3300046663 Bacteria 1590
210 Ga0495658_0011421 3300046683 Bacteria 4467
211 Ga0495624_0146174 3300046690 Bacteria 1447
212 Ga0495674_0385752 3300047319 Bacteria 1133
213 Ga0495686_0000373 3300047472 Bacteria 71977
214 Ga0496109_0055175 3300048912 Unclassified 3625
215 Ga0496115_0013605 3300048918 Bacteria 6157
216 Ga0496115_0100989 3300048918 Bacteria 2365
217 Ga0496121_0000007 3300048924 Bacteria 942516
218 Ga0496121_0000081 3300048924 Bacteria 229506
219 Ga0496124_0080170 3300048927 Bacteria 2687
220 Ga0496126_0053623 3300048929 Bacteria 3657
221 Ga0501034_0022636 3300049571 Bacteria 6402
222 Ga0501036_0276399 3300049572 Bacteria 1406
223 Ga0501047_0053464 3300049581 Bacteria 3905
224 Ga0501048_0067268 3300049582 Bacteria 2533
225 Ga0501070_0172832 3300049586 Bacteria 1779
226 Ga0501219_000178 3300049703 Bacteria 11731
227 Ga0501225_0002544 3300049705 Bacteria 5628
228 Ga0501080_0045346 3300049742 Bacteria 4092
229 Ga0501080_0079733 3300049742 Bacteria 3044
230 Ga0501083_0115732 3300049744 Bacteria 1760
231 Ga0501083_0196653 3300049744 Bacteria 1316
232 Ga0501241_002353 3300049758 Bacteria 3660
233 Ga0501269_004153 3300049766 Bacteria 1744
234 Ga0501035_0443054 3300049822 Bacteria 1075
235 Ga0501044_0001506 3300049823 Bacteria 27312
236 Ga0501284_00036 3300050005 Bacteria 57905
237 nmdc:mga0k408_23714_c1 3300050493 Bacteria 3464
238 nmdc:mga05p37_9161_c1 3300050507 Bacteria 11701
239 Ga0500578_0000063 3300053086 Bacteria 117869
240 Ga0500644_0000070 3300053088 Bacteria 61261
241 Ga0500644_0044450 3300053088 Bacteria 1491
242 Ga0500581_079010 3300053089 Bacteria 1645
243 Ga0500646_0008235 3300053090 Bacteria 2667
244 Ga0500646_0044003 3300053090 Bacteria 1266
245 Ga0500583_0000033 3300053092 Bacteria 99894
246 Ga0500583_0000076 3300053092 Bacteria 59162
247 Ga0500583_0000266 3300053092 Bacteria 18506
248 Ga0500654_099819 3300053099 Bacteria 1245
249 Ga0500555_018603 3300053103 Bacteria 2003
250 Ga0500569_001758 3300053109 Bacteria 4152
251 Ga0500594_0034434 3300053118 Bacteria 1353
252 Ga0500607_015906 3300053121 Bacteria 4328
253 Ga0500618_003494 3300053125 Bacteria 5362
254 Ga0500652_096662 3300053131 Bacteria 1234
255 Ga0500559_0009645 3300053136 Bacteria 4169
256 Ga0500568_0022491 3300053139 Bacteria 2695
257 Ga0500577_0001728 3300053142 Bacteria 5597
258 Ga0500577_0001916 3300053142 Bacteria 5329
259 Ga0500588_0017115 3300053146 Bacteria 1887
260 Ga0500616_0005269 3300053153 Bacteria 8838
261 Ga0500616_0012229 3300053153 Bacteria 5027
262 Ga0500622_0000212 3300053156 Bacteria 61612
263 Ga0500622_0002009 3300053156 Bacteria 15200
264 Ga0500622_0021256 3300053156 Bacteria 3445
265 Ga0500633_0009207 3300053160 Bacteria 2585
266 Ga0500633_0030151 3300053160 Bacteria 1741
267 Ga0500636_0020052 3300053177 Bacteria 3955
268 Ga0500636_0041804 3300053177 Bacteria 2711
269 Ga0501084_0253476 3300054114 Bacteria 1485

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005367 Ga0070667_100290224 Ga0070667_1002902241 307
2 3300028381 Ga0268264_10007983 Ga0268264_100079834 307
3 3300042135 Ga0450899_008024 Ga0450899_008024_208_1131 307
4 3300049822 Ga0501035_0443054 Ga0501035_0443054_132_1055 307
5 3300044765 Ga0466970_0105104 Ga0466970_0105104_41_967 308
6 3300049572 Ga0501036_0276399 Ga0501036_0276399_445_1371 308
7 3300053118 Ga0500594_0034434 Ga0500594_0034434_28_954 308
8 3300053156 Ga0500622_0021256 Ga0500622_0021256_46_972 308
9 3300046616 Ga0495668_0064682 Ga0495668_0064682_847_1794 315
10 3300053177 Ga0500636_0020052 Ga0500636_0020052_56_1006 316
11 3300002738 JGI25154J39366_1000002 JGI25154J39366_100000257 325
12 3300002741 JGI25157J39369_1001797 JGI25157J39369_10017972 325
13 3300025246 Ga0209646_1000005 Ga0209646_1000005321 325
14 3300025250 Ga0209026_1000154 Ga0209026_100015414 325
15 3300025297 Ga0209758_1024939 Ga0209758_10249392 325
16 3300025302 Ga0207426_1000150 Ga0207426_100015020 325
17 iso_pu_bacteria 2910245624 2910246848 326
18 3300005617 Ga0068859_100464468 Ga0068859_1004644681 327
19 3300005843 Ga0068860_100001650 Ga0068860_1000016502 327
20 3300006931 Ga0097620_100464474 Ga0097620_1004644741 327
21 3300025923 Ga0207681_10045932 Ga0207681_100459323 327
22 3300025986 Ga0207658_10224604 Ga0207658_102246042 327
23 3300046616 Ga0495668_0000099 Ga0495668_0000099_26641_27624 327
24 3300053090 Ga0500646_0044003 Ga0500646_0044003_261_1244 327
25 3300044842 Ga0466957_0001007 Ga0466957_0001007_9740_10726 328
26 3300047472 Ga0495686_0000373 Ga0495686_0000373_40495_41481 328
27 3300048918 Ga0496115_0013605 Ga0496115_0013605_2141_3127 328
28 3300049766 Ga0501269_004153 Ga0501269_004153_714_1700 328
29 3300053086 Ga0500578_0000063 Ga0500578_0000063_75728_76714 328
30 3300053088 Ga0500644_0044450 Ga0500644_0044450_243_1229 328
31 3300053103 Ga0500555_018603 Ga0500555_018603_756_1742 328
32 3300053146 Ga0500588_0017115 Ga0500588_0017115_80_1066 328
33 3300053125 Ga0500618_003494 Ga0500618_003494_1234_2226 329
34 3300036401 Ga0373937_0353014 Ga0373937_0353014_26_1024 330
35 3300029957 Ga0265324_10037569 Ga0265324_100375692 331
36 3300005327 Ga0070658_10000563 Ga0070658_1000056316 332
37 3300005328 Ga0070676_10000218 Ga0070676_100002187 332
38 3300005335 Ga0070666_10000969 Ga0070666_100009694 332
39 3300005338 Ga0068868_100000770 Ga0068868_10000077021 332
40 3300005347 Ga0070668_100000110 Ga0070668_10000011035 332
41 3300005364 Ga0070673_100000676 Ga0070673_1000006765 332
42 3300005367 Ga0070667_100000867 Ga0070667_10000086732 332
43 3300005455 Ga0070663_100133112 Ga0070663_1001331121 332
44 3300005457 Ga0070662_100228313 Ga0070662_1002283131 332
45 3300005459 Ga0068867_100003758 Ga0068867_1000037587 332
46 3300005539 Ga0068853_100014219 Ga0068853_1000142197 332
47 3300005543 Ga0070672_100000020 Ga0070672_10000002024 332
48 3300005548 Ga0070665_100000318 Ga0070665_10000031835 332
49 3300005563 Ga0068855_100068771 Ga0068855_1000687711 332
50 3300005616 Ga0068852_100022208 Ga0068852_1000222085 332
51 3300005618 Ga0068864_100000934 Ga0068864_1000009348 332
52 3300005834 Ga0068851_10000637 Ga0068851_100006379 332
53 3300005841 Ga0068863_100000678 Ga0068863_10000067820 332
54 3300005842 Ga0068858_100001487 Ga0068858_1000014877 332
55 3300006358 Ga0068871_100001813 Ga0068871_1000018139 332
56 3300006881 Ga0068865_100000289 Ga0068865_10000028912 332
57 3300009093 Ga0105240_10038623 Ga0105240_100386235 332
58 3300009148 Ga0105243_10396973 Ga0105243_103969731 332
59 3300009177 Ga0105248_10004712 Ga0105248_100047125 332
60 3300009551 Ga0105238_10063840 Ga0105238_100638404 332
61 3300009553 Ga0105249_10011326 Ga0105249_100113265 332
62 3300013296 Ga0157374_10001355 Ga0157374_1000135519 332
63 3300013297 Ga0157378_10010860 Ga0157378_100108607 332
64 3300013306 Ga0163162_10001474 Ga0163162_1000147421 332
65 3300013307 Ga0157372_10162312 Ga0157372_101623122 332
66 3300013308 Ga0157375_10001533 Ga0157375_100015336 332
67 3300014325 Ga0163163_10000963 Ga0163163_100009637 332
68 3300014968 Ga0157379_10000115 Ga0157379_1000011538 332
69 3300014969 Ga0157376_10000739 Ga0157376_100007399 332
70 3300017792 Ga0163161_10017400 Ga0163161_100174003 332
71 3300025321 Ga0207656_10000963 Ga0207656_100009638 332
72 3300025903 Ga0207680_10001579 Ga0207680_100015799 332
73 3300025907 Ga0207645_10001052 Ga0207645_100010527 332
74 3300025909 Ga0207705_10001524 Ga0207705_1000152410 332
75 3300025938 Ga0207704_10026164 Ga0207704_100261643 332
76 3300025940 Ga0207691_10000673 Ga0207691_1000067330 332
77 3300025941 Ga0207711_10115078 Ga0207711_101150782 332
78 3300025949 Ga0207667_10053342 Ga0207667_100533421 332
79 3300025960 Ga0207651_10003454 Ga0207651_100034546 332
80 3300025972 Ga0207668_10000344 Ga0207668_1000034422 332
81 3300025986 Ga0207658_10002261 Ga0207658_100022617 332
82 3300026023 Ga0207677_10001511 Ga0207677_100015119 332
83 3300026035 Ga0207703_10002925 Ga0207703_100029257 332
84 3300026041 Ga0207639_10010437 Ga0207639_100104371 332
85 3300026067 Ga0207678_10161692 Ga0207678_101616923 332
86 3300026088 Ga0207641_10002528 Ga0207641_100025287 332
87 3300026089 Ga0207648_10004291 Ga0207648_1000429110 332
88 3300026095 Ga0207676_10004844 Ga0207676_100048442 332
89 3300026142 Ga0207698_10050196 Ga0207698_100501961 332
90 3300028379 Ga0268266_10002881 Ga0268266_1000288110 332
91 3300028381 Ga0268264_10004052 Ga0268264_100040526 332
92 3300035410 Ga0373924_0063514 Ga0373924_0063514_425_1429 332
93 3300036401 Ga0373937_0195910 Ga0373937_0195910_742_1746 332
94 3300046517 Ga0495630_0123373 Ga0495630_0123373_485_1489 332
95 3300046663 Ga0495635_0149440 Ga0495635_0149440_285_1289 332
96 3300046683 Ga0495658_0011421 Ga0495658_0011421_1542_2546 332
97 3300046690 Ga0495624_0146174 Ga0495624_0146174_207_1211 332
98 3300047319 Ga0495674_0385752 Ga0495674_0385752_75_1079 332
99 3300048912 Ga0496109_0055175 Ga0496109_0055175_415_1422 332
100 3300049586 Ga0501070_0172832 Ga0501070_0172832_336_1340 333
101 3300049742 Ga0501080_0045346 Ga0501080_0045346_1500_2504 333
102 3300049744 Ga0501083_0115732 Ga0501083_0115732_378_1382 333
103 3300054114 Ga0501084_0253476 Ga0501084_0253476_116_1120 333
104 3300013306 Ga0163162_10022454 Ga0163162_100224543 334
105 3300013306 Ga0163162_10109908 Ga0163162_101099082 334
106 3300014969 Ga0157376_10101839 Ga0157376_101018391 334
107 3300014969 Ga0157376_10208760 Ga0157376_102087601 334
108 3300048918 Ga0496115_0100989 Ga0496115_0100989_732_1742 335
109 3300049742 Ga0501080_0079733 Ga0501080_0079733_1051_2061 335
110 3300049744 Ga0501083_0196653 Ga0501083_0196653_17_1027 335
111 3300026116 Ga0207674_10317430 Ga0207674_103174302 338
112 3300048927 Ga0496124_0080170 Ga0496124_0080170_1585_2622 338
113 3300005337 Ga0070682_100002600 Ga0070682_1000026006 339
114 3300005341 Ga0070691_10002629 Ga0070691_100026294 339
115 3300005547 Ga0070693_100046374 Ga0070693_1000463742 339
116 3300005563 Ga0068855_100030726 Ga0068855_1000307262 339
117 3300009174 Ga0105241_10001839 Ga0105241_100018397 339
118 3300025912 Ga0207707_10000747 Ga0207707_1000074715 339
119 3300025917 Ga0207660_10002113 Ga0207660_1000211313 339
120 3300025921 Ga0207652_10002726 Ga0207652_100027266 339
121 3300042876 Ga0451577_0026427 Ga0451577_0026427_3878_4900 340
122 3300044712 Ga0453684_0011435 Ga0453684_0011435_4893_5915 340
123 iso_pu_bacteria 2818991444 2819590918 341
124 iso_pu_bacteria 2884791551 2884792167 341
125 iso_pu_bacteria 2929177148 2929181844 341
126 iso_pu_bacteria 2929239360 2929242650 341
127 iso_pu_bacteria 2945977869 2945984239 341
128 iso_pu_bacteria 2946013367 2946016367 341
129 iso_pu_bacteria 8003151029 8003152719 341
130 iso_pu_bacteria 2738541278 2738725620 342
131 3300005563 Ga0068855_100058401 Ga0068855_1000584013 344
132 3300005577 Ga0068857_100002998 Ga0068857_1000029988 344
133 3300005614 Ga0068856_100098986 Ga0068856_1000989862 344
134 3300005616 Ga0068852_100004000 Ga0068852_1000040006 344
135 3300009551 Ga0105238_10066991 Ga0105238_100669912 344
136 3300013100 Ga0157373_10027828 Ga0157373_100278284 344
137 3300013105 Ga0157369_10023841 Ga0157369_100238414 344
138 3300013307 Ga0157372_10006174 Ga0157372_100061742 344
139 3300013307 Ga0157372_10015151 Ga0157372_100151515 344
140 3300025904 Ga0207647_10040629 Ga0207647_100406292 344
141 3300025913 Ga0207695_10049731 Ga0207695_100497312 344
142 3300025924 Ga0207694_10049164 Ga0207694_100491643 344
143 3300025949 Ga0207667_10015552 Ga0207667_100155525 344
144 3300026116 Ga0207674_10006517 Ga0207674_100065173 344
145 3300026142 Ga0207698_10025615 Ga0207698_100256152 344
146 iso_pu_bacteria 2840677318 2840678741 344
147 iso_pu_bacteria 2896085136 2896086559 344
148 3300003320 rootH2_10128092 rootH2_101280921 345
149 3300003322 rootL2_10048900 rootL2_100489002 345
150 3300003322 rootL2_10080735 rootL2_100807351 345
151 3300003322 rootL2_10190497 rootL2_101904975 345
152 3300003323 rootH1_10013458 rootH1_100134587 345
153 3300003354 JGI25160J50197_1008370 JGI25160J50197_10083703 345
154 3300003762 Ga0055542_1005064 Ga0055542_10050641 345
155 3300003794 Ga0055531_10000895 Ga0055531_100008957 345
156 3300005333 Ga0070677_10042456 Ga0070677_100424562 345
157 3300005364 Ga0070673_100319725 Ga0070673_1003197252 345
158 3300005539 Ga0068853_100003579 Ga0068853_1000035793 345
159 3300005614 Ga0068856_100008593 Ga0068856_1000085934 345
160 3300005616 Ga0068852_100004838 Ga0068852_1000048387 345
161 3300009147 Ga0114129_10003677 Ga0114129_100036773 345
162 3300009545 Ga0105237_10066445 Ga0105237_100664452 345
163 3300010375 Ga0105239_10000456 Ga0105239_1000045644 345
164 3300010375 Ga0105239_10000713 Ga0105239_1000071324 345
165 3300010375 Ga0105239_10105132 Ga0105239_101051322 345
166 3300010375 Ga0105239_10285638 Ga0105239_102856382 345
167 3300013100 Ga0157373_10000927 Ga0157373_100009273 345
168 3300013308 Ga0157375_10022119 Ga0157375_100221194 345
169 3300014325 Ga0163163_10317983 Ga0163163_103179832 345
170 3300014326 Ga0157380_10198108 Ga0157380_101981082 345
171 3300021384 Ga0213876_10000680 Ga0213876_1000068018 345
172 3300025208 Ga0209436_100989 Ga0209436_1009895 345
173 3300025242 Ga0209258_100315 Ga0209258_10031551 345
174 3300025254 Ga0209148_1000322 Ga0209148_100032250 345
175 3300025302 Ga0207426_1000139 Ga0207426_1000139115 345
176 3300025304 Ga0209257_1000013 Ga0209257_1000013158 345
177 3300025893 Ga0207682_10003730 Ga0207682_100037303 345
178 3300025913 Ga0207695_10000077 Ga0207695_1000007754 345
179 3300025913 Ga0207695_10052129 Ga0207695_100521294 345
180 3300025940 Ga0207691_10161290 Ga0207691_101612902 345
181 3300025949 Ga0207667_10012408 Ga0207667_1001240810 345
182 3300026041 Ga0207639_10070120 Ga0207639_100701202 345
183 3300026089 Ga0207648_10229745 Ga0207648_102297452 345
184 3300039437 Ga0436365_1468940 Ga0436365_1468940_25209_26246 345
185 3300041997 Ga0439431_0001808 Ga0439431_0001808_2973_4010 345
186 3300044658 Ga0466972_0000023 Ga0466972_0000023_69374_70411 345
187 3300044658 Ga0466972_0069538 Ga0466972_0069538_619_1656 345
188 3300044684 Ga0466966_0000573 Ga0466966_0000573_14332_15408 345
189 3300045049 Ga0466959_0000143 Ga0466959_0000143_10850_11926 345
190 3300045049 Ga0466959_0009265 Ga0466959_0009265_351_1388 345
191 3300046507 Ga0495606_0042820 Ga0495606_0042820_685_1722 345
192 3300046616 Ga0495668_0009844 Ga0495668_0009844_4754_5794 345
193 3300046648 Ga0495611_0000528 Ga0495611_0000528_19569_20606 345
194 3300048924 Ga0496121_0000007 Ga0496121_0000007_338822_339859 345
195 3300048929 Ga0496126_0053623 Ga0496126_0053623_1108_2172 345
196 3300049571 Ga0501034_0022636 Ga0501034_0022636_2746_3783 345
197 3300050507 nmdc:mga05p37_9161_c1 nmdc:mga05p37_9161_c1_1970_3007 345
198 3300053088 Ga0500644_0000070 Ga0500644_0000070_41361_42398 345
199 3300053089 Ga0500581_079010 Ga0500581_079010_213_1250 345
200 3300053092 Ga0500583_0000033 Ga0500583_0000033_65307_66344 345
201 3300053092 Ga0500583_0000266 Ga0500583_0000266_13726_14763 345
202 3300053131 Ga0500652_096662 Ga0500652_096662_67_1104 345
203 3300053142 Ga0500577_0001728 Ga0500577_0001728_3053_4090 345
204 3300053153 Ga0500616_0005269 Ga0500616_0005269_5929_6966 345
205 3300053156 Ga0500622_0002009 Ga0500622_0002009_9385_10422 345
206 3300053160 Ga0500633_0009207 Ga0500633_0009207_1052_2089 345
207 3300003322 rootL2_10051414 rootL2_100514146 346
208 3300003322 rootL2_10057063 rootL2_100570633 346
209 3300005563 Ga0068855_100024105 Ga0068855_1000241053 346
210 3300005614 Ga0068856_100080480 Ga0068856_1000804801 346
211 3300006195 Ga0075366_10002122 Ga0075366_100021225 346
212 3300006195 Ga0075366_10027380 Ga0075366_100273802 346
213 3300009147 Ga0114129_10004777 Ga0114129_1000477718 346
214 3300009174 Ga0105241_10008421 Ga0105241_100084219 346
215 3300009176 Ga0105242_10208467 Ga0105242_102084672 346
216 3300009545 Ga0105237_10027333 Ga0105237_100273332 346
217 3300010375 Ga0105239_10003267 Ga0105239_1000326713 346
218 3300025246 Ga0209646_1000712 Ga0209646_100071210 346
219 3300025911 Ga0207654_10071038 Ga0207654_100710381 346
220 3300031456 Ga0307513_10153963 Ga0307513_101539632 346
221 3300031456 Ga0307513_10213607 Ga0307513_102136072 346
222 3300031507 Ga0307509_10016901 Ga0307509_100169013 346
223 3300031730 Ga0307516_10003458 Ga0307516_1000345815 346
224 3300041404 Ga0439436_0009285 Ga0439436_0009285_586_1626 346
225 3300042007 Ga0439449_0015256 Ga0439449_0015256_550_1590 346
226 3300042014 Ga0439457_000748 Ga0439457_000748_1029_2069 346
227 3300042014 Ga0439457_009573 Ga0439457_009573_579_1631 346
228 3300042015 Ga0439462_0005853 Ga0439462_0005853_286_1326 346
229 3300044656 Ga0466969_0000687 Ga0466969_0000687_10153_11193 346
230 3300044658 Ga0466972_0000082 Ga0466972_0000082_64788_65828 346
231 3300044658 Ga0466972_0090916 Ga0466972_0090916_380_1420 346
232 3300044684 Ga0466966_0000015 Ga0466966_0000015_105137_106177 346
233 3300044842 Ga0466957_0010692 Ga0466957_0010692_3590_4726 346
234 3300045049 Ga0466959_0000030 Ga0466959_0000030_32522_33562 346
235 3300049581 Ga0501047_0053464 Ga0501047_0053464_58_1239 346
236 3300049582 Ga0501048_0067268 Ga0501048_0067268_637_1677 346
237 3300049703 Ga0501219_000178 Ga0501219_000178_4267_5307 346
238 3300049705 Ga0501225_0002544 Ga0501225_0002544_4522_5562 346
239 3300049823 Ga0501044_0001506 Ga0501044_0001506_8931_9971 346
240 3300050005 Ga0501284_00036 Ga0501284_00036_48141_49181 346
241 3300050493 nmdc:mga0k408_23714_c1 nmdc:mga0k408_23714_c1_1373_2413 346
242 3300053090 Ga0500646_0008235 Ga0500646_0008235_21_1061 346
243 3300053092 Ga0500583_0000076 Ga0500583_0000076_28105_29145 346
244 3300053099 Ga0500654_099819 Ga0500654_099819_45_1085 346
245 3300053177 Ga0500636_0041804 Ga0500636_0041804_300_1340 346
246 3300041997 Ga0439431_0012719 Ga0439431_0012719_335_1438 349
247 iso_pu_bacteria 2818991442 2819575031 350
248 iso_pu_bacteria 2821136567 2821141128 350
249 iso_pu_bacteria 2904467357 2904471629 350
250 iso_pu_bacteria 2883068021 2883071691 351
251 iso_pu_bacteria 2884791551 2884796832 351
252 iso_pu_bacteria 2929177148 2929177650 351
253 iso_pu_bacteria 2945977869 2945980000 351
254 iso_pu_bacteria 2946013367 2946014140 351
255 3300003322 rootL2_10008865 rootL2_1000886517 354
256 3300003322 rootL2_10026021 rootL2_1002602120 354
257 3300003762 Ga0055542_1004946 Ga0055542_10049462 354
258 3300005353 Ga0070669_100012698 Ga0070669_1000126986 354
259 3300015265 Ga0182005_1000347 Ga0182005_10003473 354
260 3300025242 Ga0209258_100116 Ga0209258_100116103 354
261 3300025254 Ga0209148_1000175 Ga0209148_100017534 354
262 3300025304 Ga0209257_1000004 Ga0209257_100000489 354
263 3300025923 Ga0207681_10018800 Ga0207681_100188004 354
264 3300046558 Ga0495633_0000116 Ga0495633_0000116_65767_66831 354
265 3300048924 Ga0496121_0000081 Ga0496121_0000081_190039_191109 354
266 3300049758 Ga0501241_002353 Ga0501241_002353_1385_2449 354
267 3300053109 Ga0500569_001758 Ga0500569_001758_2066_3130 354
268 3300053121 Ga0500607_015906 Ga0500607_015906_652_1764 354
269 3300053136 Ga0500559_0009645 Ga0500559_0009645_284_1396 354
270 3300053142 Ga0500577_0001916 Ga0500577_0001916_355_1419 354
271 3300053153 Ga0500616_0012229 Ga0500616_0012229_261_1325 354
272 3300053156 Ga0500622_0000212 Ga0500622_0000212_14564_15628 354
273 3300053160 Ga0500633_0030151 Ga0500633_0030151_322_1434 354
274 3300001979 JGI24740J21852_10010133 JGI24740J21852_100101332 355
275 3300001989 JGI24739J22299_10018980 JGI24739J22299_100189804 355
276 3300002738 JGI25154J39366_1000078 JGI25154J39366_10000785 355
277 3300003215 JGI25153J46596_10003299 JGI25153J46596_100032992 355
278 3300003354 JGI25160J50197_1005416 JGI25160J50197_10054165 355
279 3300005262 Ga0065165_1025519 Ga0065165_10255191 355
280 3300025208 Ga0209436_101020 Ga0209436_1010208 355
281 3300025246 Ga0209646_1000004 Ga0209646_1000004598 355
282 3300025250 Ga0209026_1000136 Ga0209026_100013661 355
283 3300025284 Ga0209130_1003198 Ga0209130_10031983 355
284 3300025297 Ga0209758_1006380 Ga0209758_10063807 355
285 3300025302 Ga0207426_1000024 Ga0207426_1000024126 355
286 3300025302 Ga0207426_1001807 Ga0207426_10018074 355
287 3300053139 Ga0500568_0022491 Ga0500568_0022491_1588_2655 355
288 iso_pu_bacteria 2896109856 2896113140 355

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01207

Dus

Dihydrouridine synthase (Dus)

47

358

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vhn-assembly1.cif.gz_A crystal structure of a putative flavin oxidoreductase with flavin 0.9403 13 323
1vhn-assembly1.cif.gz_A crystal structure of a putative flavin oxidoreductase with flavin 0.9285 13 323
6ei9-assembly2.cif.gz_B crystal structure of e. coli trna-dihydrouridine synthase b (dusb) 0.9243 2 319
6ei9-assembly2.cif.gz_B crystal structure of e. coli trna-dihydrouridine synthase b (dusb) 0.8931 2 319
3b0p-assembly1.cif.gz_A trna-dihydrouridine synthase from thermus thermophilus 0.8416 10 323
ID Description Score Start End Superfamily
af_P0ABT5_6_247_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9603 14 251 3.20.20.70
1vhnA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9466 13 253 3.20.20.70
af_Q54ES7_56_285_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9412 15 238 3.20.20.70
1vhnA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9388 13 253 3.20.20.70
af_Q9VIS4_253_495_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9339 11 243 3.20.20.70
ID Description Score Start End GO Terms
AF-S7VFR4-F1-model_v4 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.9934 226 329 GO:0016491
AF-S7VFR4-F1-model_v4 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.984 226 329 GO:0016491
AF-A0A090WNH1-F1-model_v4 tRNA-dihydrouridine synthase (EC 1.3.1.-) 0.9802 1 279 GO:0003723
GO:0017150
GO:0050660
AF-A0A4Q3W6G6-F1-model_v4 tRNA-dihydrouridine synthase family protein 0.9799 1 224 GO:0003723
GO:0017150
GO:0050660
AF-A0A7Y3CZC3-F1-model_v4 tRNA dihydrouridine synthase DusB 0.978 198 330 GO:0003723
GO:0017150

Feature Viewer

pLDDT pTM Quality
87.85 0.87 High
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Predicted Structure (AlphaFold2)

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