F388603

General Info

Members Datasets Scaffolds Average Seq Length
288 194 244 316

Family's Representative Sequence

Representative Sequence 3300017792|Ga0163161_10007031|Ga0163161_100070316
Length 351
Sequence LISYEVPRKWDLFRLQEFLSLGTPRELPMNRFDRITAILIQLQSKKVVKAQDLADRFDTSLRTIYRDIRTLEEAGVPLYGEAGVGYSIVDGYRLPPVMFTKEEAVAFITAEKLMSKFTDNELNKNFGSAMYKIKAVLRGTEKDLVENLEEQIVVVQKPNYVSPTGNILDILLKAIADKKAVKITYKAFANDSSERIIEPIGVFHENDFWYTIGFCHLRQEYRQFRIDRVLSIALTNLDQEDRASLKEFQELRKTMKSGFVTQKAVIRVDKSVAVYMQDRKYFYGFVSEIETDDYIEMTFLSMSVEEGLARWFLMYADYAEIVEPQALKDSVAKLLEKITAKIAVANDEASV

Samples

Sample ID Description Type Environment
1 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
2 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
3 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
4 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
5 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
6 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
7 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
8 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
9 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
10 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
11 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
12 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
13 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
14 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
15 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
16 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
17 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
18 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
19 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
20 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
21 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
22 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
23 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
24 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
25 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
26 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
27 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
28 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
29 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
30 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
31 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
32 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
33 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
34 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
35 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
36 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
37 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
38 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
39 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
40 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
41 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
42 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
43 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
44 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
45 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
46 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
47 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
48 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
49 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
50 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
51 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
52 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
53 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
54 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
55 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
56 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
57 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
58 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
59 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
60 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
61 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
62 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
63 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
64 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
67 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
68 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
69 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
70 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
71 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
72 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
73 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
74 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
75 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
76 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
77 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
78 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
79 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
80 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
81 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
82 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
83 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
84 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
85 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
86 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
87 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
88 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
91 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
92 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
93 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
94 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
95 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
96 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
97 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
98 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
117 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
118 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
119 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
120 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
123 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
124 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
125 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
126 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
127 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
128 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
129 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
130 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
131 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
132 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
133 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
134 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
135 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
136 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
137 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
138 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
139 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
140 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
141 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
142 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
143 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
144 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
145 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
146 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
147 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
148 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
149 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
150 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
151 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
152 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
153 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
154 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
155 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
156 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
157 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
158 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
159 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
160 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
161 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
162 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
163 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
164 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
165 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
168 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
174 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
175 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
176 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
177 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
178 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
179 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
180 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
181 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
182 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
183 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
184 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
185 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
186 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
187 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
188 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
189 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
190 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
191 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
192 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
193 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
194 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.72
Metatranscriptomes 0
Isolates 15.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.72
Nodule 2.08
Rhizoplane 1.39
Rhizosphere 72.57
Stem 0
Stem Tuber 0
Unclassified 14.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1020034 3300001915 Unclassified 1055
2 JGI24740J21852_10046423 3300001979 Bacteria 1275
3 JGI24739J22299_10003252 3300001989 Bacteria 6195
4 JGI24739J22299_10034619 3300001989 Bacteria 1719
5 JGI24737J22298_10019998 3300001990 Bacteria 2140
6 JGI24735J21928_10000006 3300002067 Bacteria 339303
7 JGI25162J39368_1000046 3300002737 Bacteria 169695
8 rootH1_10017396 3300003316 Bacteria 6095
9 rootH2_10222287 3300003320 Bacteria 2127
10 rootL2_10077257 3300003322 Bacteria 6981
11 rootL2_10306377 3300003322 Unclassified 1679
12 rootH1_10150474 3300003323 Bacteria 5656
13 rootH1_10201075 3300003323 Unclassified 1744
14 Ga0055543_1007745 3300004625 Bacteria 2451
15 Ga0065165_1000169 3300005262 Bacteria 115398
16 Ga0065714_10005577 3300005288 Bacteria 5436
17 Ga0065714_10073354 3300005288 Bacteria 3181
18 Ga0065714_10094635 3300005288 Bacteria 1810
19 Ga0065704_10070973 3300005289 Bacteria 14113
20 Ga0065715_10132709 3300005293 Bacteria 1985
21 Ga0070658_10054949 3300005327 Bacteria 3234
22 Ga0070690_100123364 3300005330 Unclassified 1741
23 Ga0070680_100199387 3300005336 Bacteria 1687
24 Ga0070660_100260262 3300005339 Bacteria 1416
25 Ga0070668_100092959 3300005347 Bacteria 2380
26 Ga0070659_100010977 3300005366 Bacteria 6689
27 Ga0070659_100030058 3300005366 Bacteria 4203
28 Ga0070663_100281224 3300005455 Unclassified 1326
29 Ga0070679_100070703 3300005530 Bacteria 3481
30 Ga0068853_100065142 3300005539 Bacteria 3162
31 Ga0068853_100106899 3300005539 Unclassified 2481
32 Ga0068853_100354572 3300005539 Bacteria 1365
33 Ga0068855_100023668 3300005563 Bacteria 7354
34 Ga0068855_100045480 3300005563 Bacteria 5193
35 Ga0068854_100010881 3300005578 Bacteria 5905
36 Ga0068854_100086656 3300005578 Bacteria 2322
37 Ga0068859_100000461 3300005617 Bacteria 40272
38 Ga0068851_10007743 3300005834 Bacteria 4941
39 Ga0068863_100133592 3300005841 Unclassified 2370
40 Ga0081539_10000345 3300005985 Bacteria 102083
41 Ga0075366_10000700 3300006195 Bacteria 15874
42 Ga0075366_10033420 3300006195 Bacteria 3030
43 Ga0075370_10200147 3300006353 Bacteria 1178
44 Ga0097620_100000461 3300006931 Bacteria 40272
45 Ga0099824_1000021 3300006942 Bacteria 88647
46 Ga0079104_1000457 3300006946 Bacteria 46180
47 Ga0099826_10002209 3300006948 Bacteria 12412
48 Ga0105244_10000038 3300009036 Bacteria 158460
49 Ga0105250_10012318 3300009092 Bacteria 3532
50 Ga0105240_10000011 3300009093 Bacteria 523646
51 Ga0105240_10000068 3300009093 Bacteria 207756
52 Ga0105240_10012361 3300009093 Bacteria 11789
53 Ga0105240_10406027 3300009093 Bacteria 1533
54 Ga0105240_10589750 3300009093 Bacteria 1225
55 Ga0105241_10009207 3300009174 Bacteria 7263
56 Ga0105237_10000274 3300009545 Bacteria 72354
57 Ga0105237_10045792 3300009545 Bacteria 4401
58 Ga0105237_10179865 3300009545 Bacteria 2115
59 Ga0105239_10000002 3300010375 Bacteria 610298
60 Ga0105239_10000332 3300010375 Bacteria 69065
61 Ga0105239_10001657 3300010375 Bacteria 29355
62 Ga0105239_10001802 3300010375 Bacteria 28139
63 Ga0105239_10039662 3300010375 Bacteria 5159
64 Ga0157373_10000016 3300013100 Bacteria 181215
65 Ga0157373_10005028 3300013100 Bacteria 9932
66 Ga0157373_10009486 3300013100 Bacteria 7190
67 Ga0157371_10000141 3300013102 Bacteria 104396
68 Ga0157371_10003961 3300013102 Bacteria 13137
69 Ga0157371_10009726 3300013102 Bacteria 7548
70 Ga0157371_10012304 3300013102 Bacteria 6548
71 Ga0157370_10000091 3300013104 Bacteria 102819
72 Ga0157370_10008152 3300013104 Bacteria 11330
73 Ga0157370_10013182 3300013104 Bacteria 8525
74 Ga0157370_10015550 3300013104 Bacteria 7737
75 Ga0157370_10027725 3300013104 Bacteria 5584
76 Ga0157370_10035459 3300013104 Bacteria 4848
77 Ga0157370_10249269 3300013104 Bacteria 1643
78 Ga0157369_10000475 3300013105 Bacteria 53219
79 Ga0157369_10014000 3300013105 Bacteria 9062
80 Ga0157369_10021976 3300013105 Bacteria 7130
81 Ga0157369_10190122 3300013105 Bacteria 2157
82 Ga0157378_10011939 3300013297 Bacteria 7604
83 Ga0163162_10017108 3300013306 Bacteria 7094
84 Ga0163162_10123509 3300013306 Unclassified 2694
85 Ga0157372_10000061 3300013307 Bacteria 119814
86 Ga0157372_10005116 3300013307 Bacteria 13933
87 Ga0157372_10009788 3300013307 Bacteria 10194
88 Ga0157372_10126503 3300013307 Bacteria 2938
89 Ga0157375_10482273 3300013308 Unclassified 1405
90 Ga0182006_1000391 3300015261 Bacteria 36114
91 Ga0182007_10016749 3300015262 Bacteria 2696
92 Ga0182007_10036647 3300015262 Unclassified 1650
93 Ga0163161_10000019 3300017792 Bacteria 216758
94 Ga0163161_10007031 3300017792 Bacteria 7786
95 Ga0163161_10145064 3300017792 Unclassified 1800
96 Ga0213876_10010743 3300021384 Bacteria 4906
97 Ga0209437_100070 3300025233 Bacteria 306718
98 Ga0209026_1002342 3300025250 Bacteria 7178
99 Ga0209233_1005538 3300025261 Bacteria 4179
100 Ga0209233_1023846 3300025261 Bacteria 1541
101 Ga0209676_1000329 3300025292 Bacteria 91571
102 Ga0207656_10007764 3300025321 Unclassified 3925
103 Ga0207696_1014746 3300025711 Bacteria 2670
104 Ga0207655_1000034 3300025728 Bacteria 364737
105 Ga0207647_10000139 3300025904 Bacteria 57477
106 Ga0207647_10000545 3300025904 Bacteria 30015
107 Ga0207654_10011740 3300025911 Bacteria 4473
108 Ga0207707_10192589 3300025912 Bacteria 1778
109 Ga0207707_10222623 3300025912 Bacteria 1642
110 Ga0207695_10000010 3300025913 Bacteria 981919
111 Ga0207695_10000131 3300025913 Bacteria 223762
112 Ga0207671_10000150 3300025914 Bacteria 107685
113 Ga0207671_10000787 3300025914 Bacteria 40182
114 Ga0207671_10004975 3300025914 Bacteria 12451
115 Ga0207671_10013874 3300025914 Bacteria 6398
116 Ga0207660_10044569 3300025917 Bacteria 3121
117 Ga0207657_10010552 3300025919 Bacteria 9211
118 Ga0207657_10061272 3300025919 Bacteria 3227
119 Ga0207694_10285711 3300025924 Bacteria 1356
120 Ga0207690_10017934 3300025932 Bacteria 4333
121 Ga0207667_10322540 3300025949 Bacteria 1577
122 Ga0207640_10002865 3300025981 Bacteria 9251
123 Ga0207640_10041361 3300025981 Bacteria 2931
124 Ga0207639_10024410 3300026041 Bacteria 4375
125 Ga0207678_10053551 3300026067 Bacteria 3477
126 Ga0207674_10068000 3300026116 Bacteria 3586
127 Ga0207674_10089105 3300026116 Bacteria 3078
128 Ga0209281_1000045 3300027111 Bacteria 328124
129 Ga0209489_108035 3300027361 Bacteria 14947
130 Ga0209282_1003213 3300027666 Bacteria 9671
131 Ga0307517_10007634 3300028786 Bacteria 15724
132 Ga0307515_10000001 3300028794 Bacteria 4259510
133 Ga0265327_10000288 3300031251 Bacteria 99230
134 Ga0265327_10000319 3300031251 Bacteria 91814
135 Ga0307408_100001593 3300031548 Bacteria 16754
136 Ga0307516_10003728 3300031730 Bacteria 19366
137 Ga0307405_10000001 3300031731 Bacteria 1731270
138 Ga0307405_10061159 3300031731 Bacteria 2379
139 Ga0307405_10186905 3300031731 Bacteria 1492
140 Ga0307413_10000002 3300031824 Bacteria 115948
141 Ga0307410_10004556 3300031852 Bacteria 7184
142 Ga0307406_10000006 3300031901 Bacteria 147237
143 Ga0307406_10003873 3300031901 Bacteria 8148
144 Ga0307407_10009421 3300031903 Bacteria 4549
145 Ga0307412_10078046 3300031911 Bacteria 2279
146 Ga0307412_10369236 3300031911 Bacteria 1158
147 Ga0307416_100000091 3300032002 Bacteria 61269
148 Ga0307414_10000064 3300032004 Bacteria 106601
149 Ga0307414_10002727 3300032004 Bacteria 9290
150 Ga0307414_10042031 3300032004 Bacteria 3102
151 Ga0307414_10069907 3300032004 Bacteria 2526
152 Ga0307414_10093623 3300032004 Bacteria 2240
153 Ga0307414_10246772 3300032004 Bacteria 1481
154 Ga0307411_10000009 3300032005 Bacteria 319906
155 Ga0307507_10000510 3300033179 Bacteria 81853
156 Ga0307510_10004302 3300033180 Bacteria 16752
157 Ga0395899_0000001 3300037312 Bacteria 1750322
158 Ga0395899_0000382 3300037312 Bacteria 52888
159 Ga0395905_0058696 3300037471 Bacteria 3598
160 Ga0436365_1734381 3300039437 Bacteria 11979
161 Ga0439466_0001191 3300041411 Bacteria 10133
162 Ga0439466_0008076 3300041411 Bacteria 3969
163 Ga0451795_0622026 3300041456 Unclassified 996
164 Ga0451577_0000037 3300042876 Bacteria 360162
165 Ga0451577_0008556 3300042876 Bacteria 9952
166 Ga0466969_0115944 3300044656 Bacteria 1250
167 Ga0453683_0000021 3300044673 Bacteria 284502
168 Ga0453683_0000085 3300044673 Bacteria 140003
169 Ga0453683_0066603 3300044673 Bacteria 2251
170 Ga0453684_0000110 3300044712 Bacteria 360542
171 Ga0453684_0067133 3300044712 Bacteria 4563
172 Ga0466970_0176397 3300044765 Bacteria 1185
173 Ga0451576_0000002 3300045051 Bacteria 1670975
174 Ga0451576_0000039 3300045051 Bacteria 360162
175 Ga0451576_0665580 3300045051 Unclassified 1094
176 Ga0495627_004514 3300046453 Bacteria 5805
177 Ga0495650_0000014 3300046471 Bacteria 581606
178 Ga0495650_0046568 3300046471 Bacteria 1819
179 Ga0495585_0000081 3300046492 Bacteria 99243
180 Ga0495607_0021774 3300046501 Bacteria 4031
181 Ga0495583_0035477 3300046506 Bacteria 2380
182 Ga0495606_0000020 3300046507 Bacteria 274490
183 Ga0495606_0008159 3300046507 Bacteria 9169
184 Ga0495606_0101443 3300046507 Bacteria 1752
185 Ga0495606_0103493 3300046507 Bacteria 1729
186 Ga0495610_0012389 3300046512 Bacteria 5136
187 Ga0495610_0120850 3300046512 Bacteria 1148
188 Ga0495616_0000533 3300046513 Bacteria 28740
189 Ga0495616_0008805 3300046513 Bacteria 5943
190 Ga0495632_0102135 3300046519 Bacteria 1351
191 Ga0495643_0000597 3300046522 Bacteria 43811
192 Ga0495644_0015592 3300046523 Bacteria 2912
193 Ga0495609_0020326 3300046538 Bacteria 3068
194 Ga0495633_0003508 3300046558 Bacteria 10408
195 Ga0495668_0000138 3300046616 Bacteria 109654
196 Ga0495625_0000009 3300046660 Bacteria 404954
197 Ga0495625_0037229 3300046660 Bacteria 3571
198 Ga0495625_0041694 3300046660 Bacteria 3340
199 Ga0495625_0054589 3300046660 Bacteria 2852
200 Ga0495625_0087031 3300046660 Bacteria 2166
201 Ga0495661_0006368 3300046665 Bacteria 8308
202 Ga0495671_0048489 3300046692 Bacteria 2119
203 Ga0495649_0000172 3300046694 Bacteria 56537
204 Ga0495660_0010456 3300046810 Bacteria 5398
205 Ga0495686_0000605 3300047472 Bacteria 49652
206 Ga0495686_0003397 3300047472 Bacteria 13853
207 Ga0495686_0050848 3300047472 Bacteria 2603
208 Ga0496115_0056892 3300048918 Bacteria 3144
209 Ga0496115_0434420 3300048918 Unclassified 1062
210 Ga0496116_0000075 3300048919 Bacteria 231674
211 Ga0496121_0034239 3300048924 Bacteria 4575
212 Ga0496121_0118215 3300048924 Bacteria 2007
213 Ga0496125_0000070 3300048928 Bacteria 245793
214 Ga0496125_0000310 3300048928 Bacteria 95700
215 Ga0496126_0010806 3300048929 Bacteria 9529
216 Ga0496126_0015732 3300048929 Bacteria 7602
217 Ga0501032_0082388 3300049569 Bacteria 2141
218 Ga0501034_0008249 3300049571 Bacteria 11029
219 Ga0501034_0396649 3300049571 Bacteria 1303
220 Ga0501238_000070 3300049671 Bacteria 16667
221 Ga0501249_000022 3300049679 Bacteria 93305
222 Ga0501249_014795 3300049679 Bacteria 1664
223 Ga0501241_002775 3300049758 Bacteria 3372
224 Ga0501266_000018 3300049763 Bacteria 135236
225 Ga0501280_000628 3300049776 Bacteria 8040
226 Ga0501280_004084 3300049776 Bacteria 2172
227 nmdc:mga0k408_111_c1 3300050493 Bacteria 39614
228 nmdc:mga0k408_209_c1 3300050493 Bacteria 27944
229 nmdc:mga0k408_30285_c1 3300050493 Bacteria 3085
230 Ga0500635_0001571 3300053080 Bacteria 5502
231 Ga0500646_0012572 3300053090 Bacteria 2185
232 Ga0500641_0000050 3300053096 Bacteria 53554
233 Ga0500641_0000090 3300053096 Bacteria 35867
234 Ga0500641_0000093 3300053096 Bacteria 34372
235 Ga0500556_0043261 3300053104 Bacteria 1598
236 Ga0500618_000158 3300053125 Bacteria 56115
237 Ga0500618_023429 3300053125 Bacteria 1495
238 Ga0500642_0098529 3300053130 Bacteria 1357
239 Ga0500658_0000005 3300053134 Bacteria 369268
240 Ga0500564_119456 3300053138 Bacteria 1150
241 Ga0500616_0003690 3300053153 Bacteria 11475
242 Ga0500622_0001412 3300053156 Bacteria 19356
243 Ga0500624_001113 3300053157 Bacteria 5027
244 Ga0500584_008985 3300053726 Bacteria 4428

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300041456 Ga0451795_0622026 Ga0451795_0622026_211_978 254
2 3300046507 Ga0495606_0103493 Ga0495606_0103493_623_1570 287
3 3300046810 Ga0495660_0010456 Ga0495660_0010456_2525_3472 287
4 3300031730 Ga0307516_10003728 Ga0307516_1000372813 291
5 3300046522 Ga0495643_0000597 Ga0495643_0000597_14262_15233 291
6 3300046660 Ga0495625_0087031 Ga0495625_0087031_567_1538 291
7 3300031824 Ga0307413_10000002 Ga0307413_1000000272 294
8 3300032005 Ga0307411_10000009 Ga0307411_100000093 294
9 3300049679 Ga0501249_014795 Ga0501249_014795_166_1122 294
10 3300049763 Ga0501266_000018 Ga0501266_000018_132901_133857 294
11 3300053134 Ga0500658_0000005 Ga0500658_0000005_327196_328152 294
12 3300005336 Ga0070680_100199387 Ga0070680_1001993871 298
13 3300005339 Ga0070660_100260262 Ga0070660_1002602621 298
14 3300013104 Ga0157370_10035459 Ga0157370_100354594 298
15 3300013105 Ga0157369_10021976 Ga0157369_100219763 298
16 3300025912 Ga0207707_10192589 Ga0207707_101925893 298
17 3300025919 Ga0207657_10061272 Ga0207657_100612722 298
18 3300049569 Ga0501032_0082388 Ga0501032_0082388_610_1569 298
19 3300049571 Ga0501034_0396649 Ga0501034_0396649_291_1250 298
20 3300050493 nmdc:mga0k408_111_c1 nmdc:mga0k408_111_c1_26835_27740 298
21 3300013307 Ga0157372_10126503 Ga0157372_101265031 299
22 3300033179 Ga0307507_10000510 Ga0307507_1000051056 308
23 3300050493 nmdc:mga0k408_209_c1 nmdc:mga0k408_209_c1_23789_24757 308
24 iso_pu_bacteria 2911138879 2911139212 308
25 iso_pu_bacteria 2599185184 2599476997 309
26 iso_pu_bacteria 2928078545 2928078914 309
27 iso_pu_bacteria 2928147474 2928148718 309
28 iso_pu_bacteria 2932082852 2932085563 309
29 iso_pu_bacteria 2977232053 2977234277 309
30 iso_pu_bacteria 2881247448 2881247993 310
31 iso_pu_bacteria 2919437846 2919442363 310
32 iso_pu_bacteria 2522125168 2522551109 311
33 iso_pu_bacteria 2852623160 2852624064 311
34 iso_pu_bacteria 2884933994 2884937014 311
35 3300025250 Ga0209026_1002342 Ga0209026_10023423 312
36 iso_pu_bacteria 2833640130 2833642784 312
37 iso_pu_bacteria 2929150217 2929151030 312
38 iso_pu_bacteria 2958512119 2958513125 312
39 3300001989 JGI24739J22299_10003252 JGI24739J22299_100032526 313
40 3300001989 JGI24739J22299_10034619 JGI24739J22299_100346192 313
41 3300001990 JGI24737J22298_10019998 JGI24737J22298_100199983 313
42 3300002067 JGI24735J21928_10000006 JGI24735J21928_10000006201 313
43 3300002737 JGI25162J39368_1000046 JGI25162J39368_100004633 313
44 3300003316 rootH1_10017396 rootH1_100173965 313
45 3300003320 rootH2_10222287 rootH2_102222873 313
46 3300003322 rootL2_10077257 rootL2_100772575 313
47 3300003323 rootH1_10150474 rootH1_101504744 313
48 3300005288 Ga0065714_10005577 Ga0065714_100055774 313
49 3300005293 Ga0065715_10132709 Ga0065715_101327092 313
50 3300005366 Ga0070659_100010977 Ga0070659_1000109776 313
51 3300005530 Ga0070679_100070703 Ga0070679_1000707032 313
52 3300005539 Ga0068853_100065142 Ga0068853_1000651422 313
53 3300005539 Ga0068853_100354572 Ga0068853_1003545721 313
54 3300005563 Ga0068855_100023668 Ga0068855_1000236686 313
55 3300005563 Ga0068855_100045480 Ga0068855_1000454803 313
56 3300005578 Ga0068854_100010881 Ga0068854_1000108816 313
57 3300006195 Ga0075366_10033420 Ga0075366_100334203 313
58 3300006942 Ga0099824_1000021 Ga0099824_100002156 313
59 3300006946 Ga0079104_1000457 Ga0079104_100045725 313
60 3300006948 Ga0099826_10002209 Ga0099826_1000220911 313
61 3300009036 Ga0105244_10000038 Ga0105244_1000003816 313
62 3300009092 Ga0105250_10012318 Ga0105250_100123182 313
63 3300009093 Ga0105240_10000068 Ga0105240_1000006858 313
64 3300009174 Ga0105241_10009207 Ga0105241_100092074 313
65 3300009545 Ga0105237_10000274 Ga0105237_1000027458 313
66 3300009545 Ga0105237_10045792 Ga0105237_100457925 313
67 3300010375 Ga0105239_10000332 Ga0105239_1000033286 313
68 3300010375 Ga0105239_10001657 Ga0105239_100016571 313
69 3300010375 Ga0105239_10039662 Ga0105239_100396624 313
70 3300013100 Ga0157373_10000016 Ga0157373_1000001617 313
71 3300013100 Ga0157373_10009486 Ga0157373_100094866 313
72 3300013102 Ga0157371_10003961 Ga0157371_1000396110 313
73 3300013102 Ga0157371_10009726 Ga0157371_100097267 313
74 3300013104 Ga0157370_10000091 Ga0157370_1000009165 313
75 3300013104 Ga0157370_10008152 Ga0157370_100081529 313
76 3300013104 Ga0157370_10015550 Ga0157370_100155503 313
77 3300013104 Ga0157370_10249269 Ga0157370_102492692 313
78 3300013105 Ga0157369_10014000 Ga0157369_100140006 313
79 3300013306 Ga0163162_10017108 Ga0163162_100171086 313
80 3300013307 Ga0157372_10009788 Ga0157372_100097884 313
81 3300015261 Ga0182006_1000391 Ga0182006_100039110 313
82 3300017792 Ga0163161_10000019 Ga0163161_1000001922 313
83 3300025233 Ga0209437_100070 Ga0209437_100070105 313
84 3300025711 Ga0207696_1014746 Ga0207696_10147464 313
85 3300025728 Ga0207655_1000034 Ga0207655_100003416 313
86 3300025911 Ga0207654_10011740 Ga0207654_100117402 313
87 3300025912 Ga0207707_10222623 Ga0207707_102226232 313
88 3300025913 Ga0207695_10000131 Ga0207695_1000013158 313
89 3300025914 Ga0207671_10000787 Ga0207671_1000078739 313
90 3300025914 Ga0207671_10004975 Ga0207671_100049755 313
91 3300025914 Ga0207671_10013874 Ga0207671_100138745 313
92 3300025917 Ga0207660_10044569 Ga0207660_100445694 313
93 3300025919 Ga0207657_10010552 Ga0207657_100105526 313
94 3300025924 Ga0207694_10285711 Ga0207694_102857112 313
95 3300025949 Ga0207667_10322540 Ga0207667_103225402 313
96 3300025981 Ga0207640_10002865 Ga0207640_100028654 313
97 3300026116 Ga0207674_10068000 Ga0207674_100680003 313
98 3300027111 Ga0209281_1000045 Ga0209281_1000045268 313
99 3300027361 Ga0209489_108035 Ga0209489_10803515 313
100 3300027666 Ga0209282_1003213 Ga0209282_10032136 313
101 3300031548 Ga0307408_100001593 Ga0307408_1000015932 313
102 3300031731 Ga0307405_10000001 Ga0307405_10000001351 313
103 3300031731 Ga0307405_10186905 Ga0307405_101869052 313
104 3300031852 Ga0307410_10004556 Ga0307410_100045567 313
105 3300031901 Ga0307406_10000006 Ga0307406_1000000615 313
106 3300031901 Ga0307406_10003873 Ga0307406_100038737 313
107 3300031903 Ga0307407_10009421 Ga0307407_100094215 313
108 3300031911 Ga0307412_10078046 Ga0307412_100780461 313
109 3300032002 Ga0307416_100000091 Ga0307416_1000000913 313
110 3300032004 Ga0307414_10000064 Ga0307414_1000006467 313
111 3300032004 Ga0307414_10042031 Ga0307414_100420312 313
112 3300037471 Ga0395905_0058696 Ga0395905_0058696_2488_3435 313
113 3300041411 Ga0439466_0001191 Ga0439466_0001191_457_1416 313
114 3300041411 Ga0439466_0008076 Ga0439466_0008076_790_1749 313
115 3300046471 Ga0495650_0000014 Ga0495650_0000014_358711_359658 313
116 3300046492 Ga0495585_0000081 Ga0495585_0000081_29142_30089 313
117 3300046506 Ga0495583_0035477 Ga0495583_0035477_1122_2069 313
118 3300046507 Ga0495606_0000020 Ga0495606_0000020_210204_211151 313
119 3300046507 Ga0495606_0101443 Ga0495606_0101443_629_1576 313
120 3300046512 Ga0495610_0012389 Ga0495610_0012389_1863_2810 313
121 3300046512 Ga0495610_0120850 Ga0495610_0120850_164_1111 313
122 3300046513 Ga0495616_0008805 Ga0495616_0008805_2360_3307 313
123 3300046519 Ga0495632_0102135 Ga0495632_0102135_106_1053 313
124 3300046538 Ga0495609_0020326 Ga0495609_0020326_1582_2529 313
125 3300046558 Ga0495633_0003508 Ga0495633_0003508_1003_1950 313
126 3300046660 Ga0495625_0000009 Ga0495625_0000009_267424_268371 313
127 3300046660 Ga0495625_0037229 Ga0495625_0037229_1379_2326 313
128 3300046665 Ga0495661_0006368 Ga0495661_0006368_3854_4801 313
129 3300046692 Ga0495671_0048489 Ga0495671_0048489_1076_2023 313
130 3300046694 Ga0495649_0000172 Ga0495649_0000172_18534_19481 313
131 3300047472 Ga0495686_0050848 Ga0495686_0050848_1169_2125 313
132 3300048918 Ga0496115_0056892 Ga0496115_0056892_2047_2988 313
133 3300048919 Ga0496116_0000075 Ga0496116_0000075_206275_207234 313
134 3300048924 Ga0496121_0034239 Ga0496121_0034239_3001_3960 313
135 3300048924 Ga0496121_0118215 Ga0496121_0118215_945_1907 313
136 3300048928 Ga0496125_0000070 Ga0496125_0000070_225388_226347 313
137 3300048929 Ga0496126_0010806 Ga0496126_0010806_4617_5576 313
138 3300049671 Ga0501238_000070 Ga0501238_000070_3282_4241 313
139 3300049679 Ga0501249_000022 Ga0501249_000022_37828_38787 313
140 3300049758 Ga0501241_002775 Ga0501241_002775_2142_3101 313
141 3300049776 Ga0501280_000628 Ga0501280_000628_6424_7383 313
142 3300050493 nmdc:mga0k408_30285_c1 nmdc:mga0k408_30285_c1_1045_1992 313
143 3300053090 Ga0500646_0012572 Ga0500646_0012572_21_980 313
144 3300053096 Ga0500641_0000050 Ga0500641_0000050_4264_5232 313
145 3300053096 Ga0500641_0000090 Ga0500641_0000090_7085_8044 313
146 3300053125 Ga0500618_023429 Ga0500618_023429_383_1339 313
147 3300053138 Ga0500564_119456 Ga0500564_119456_97_1044 313
148 3300053726 Ga0500584_008985 Ga0500584_008985_369_1325 313
149 iso_pu_bacteria 2519899754 2520880231 313
150 iso_pu_bacteria 2643221600 2644012871 313
151 iso_pu_bacteria 2643221667 2644370819 313
152 iso_pu_bacteria 2643221716 2644641670 313
153 iso_pu_bacteria 2643221725 2644682217 313
154 iso_pu_bacteria 2738541279 2738735306 313
155 iso_pu_bacteria 2738541285 2738767883 313
156 iso_pu_bacteria 2738543007 2739216888 313
157 iso_pu_bacteria 2739367857 2740003585 313
158 iso_pu_bacteria 2739367858 2740008402 313
159 iso_pu_bacteria 2802428842 2802655173 313
160 iso_pu_bacteria 2816332280 2817413894 313
161 iso_pu_bacteria 2857613821 2857616385 313
162 iso_pu_bacteria 2857618242 2857622207 313
163 iso_pu_bacteria 2881359912 2881361190 313
164 iso_pu_bacteria 2903895155 2903899054 313
165 iso_pu_bacteria 2904419702 2904421535 313
166 iso_pu_bacteria 2904555929 2904557503 313
167 iso_pu_bacteria 2919191525 2919194591 313
168 iso_pu_bacteria 2958458903 2958460677 313
169 iso_pu_bacteria 2977268062 2977272409 313
170 iso_pu_bacteria 8054307821 8054307839 313
171 iso_pu_bacteria 8055419101 8055420401 313
172 iso_pu_bacteria 8055592153 8055592304 313
173 iso_pu_bacteria 8056440228 8056440634 313
174 3300001979 JGI24740J21852_10046423 JGI24740J21852_100464232 314
175 3300003322 rootL2_10306377 rootL2_103063771 314
176 3300005288 Ga0065714_10094635 Ga0065714_100946353 314
177 3300005289 Ga0065704_10070973 Ga0065704_1007097310 314
178 3300005330 Ga0070690_100123364 Ga0070690_1001233641 314
179 3300005539 Ga0068853_100106899 Ga0068853_1001068992 314
180 3300005617 Ga0068859_100000461 Ga0068859_1000004614 314
181 3300005841 Ga0068863_100133592 Ga0068863_1001335922 314
182 3300005985 Ga0081539_10000345 Ga0081539_100003459 314
183 3300006931 Ga0097620_100000461 Ga0097620_1000004614 314
184 3300013297 Ga0157378_10011939 Ga0157378_100119397 314
185 3300013306 Ga0163162_10123509 Ga0163162_101235093 314
186 3300013308 Ga0157375_10482273 Ga0157375_104822732 314
187 3300015262 Ga0182007_10016749 Ga0182007_100167492 314
188 3300015262 Ga0182007_10036647 Ga0182007_100366472 314
189 3300017792 Ga0163161_10145064 Ga0163161_101450643 314
190 3300026041 Ga0207639_10024410 Ga0207639_100244102 314
191 3300028794 Ga0307515_10000001 Ga0307515_100000012746 314
192 3300031251 Ga0265327_10000288 Ga0265327_1000028870 314
193 3300032004 Ga0307414_10002727 Ga0307414_100027274 314
194 3300033180 Ga0307510_10004302 Ga0307510_100043029 314
195 3300042876 Ga0451577_0000037 Ga0451577_0000037_340698_341648 314
196 3300044673 Ga0453683_0000021 Ga0453683_0000021_61475_62425 314
197 3300044673 Ga0453683_0000085 Ga0453683_0000085_118922_119872 314
198 3300044673 Ga0453683_0066603 Ga0453683_0066603_926_1876 314
199 3300044712 Ga0453684_0000110 Ga0453684_0000110_341078_342028 314
200 3300044712 Ga0453684_0067133 Ga0453684_0067133_129_1079 314
201 3300045051 Ga0451576_0000039 Ga0451576_0000039_18515_19465 314
202 3300046471 Ga0495650_0046568 Ga0495650_0046568_411_1361 314
203 3300046501 Ga0495607_0021774 Ga0495607_0021774_1165_2136 314
204 3300046513 Ga0495616_0000533 Ga0495616_0000533_5413_6363 314
205 3300046523 Ga0495644_0015592 Ga0495644_0015592_440_1387 314
206 3300046660 Ga0495625_0054589 Ga0495625_0054589_15_965 314
207 3300047472 Ga0495686_0000605 Ga0495686_0000605_47012_47962 314
208 3300049571 Ga0501034_0008249 Ga0501034_0008249_6916_7893 314
209 3300049776 Ga0501280_004084 Ga0501280_004084_742_1701 314
210 3300053096 Ga0500641_0000093 Ga0500641_0000093_24181_25140 314
211 iso_pu_bacteria 2513020052 2513234092 314
212 iso_pu_bacteria 2881955468 2881957096 314
213 iso_pu_bacteria 2919509842 2919512941 314
214 3300003323 rootH1_10201075 rootH1_102010752 315
215 3300004625 Ga0055543_1007745 Ga0055543_10077452 315
216 3300005262 Ga0065165_1000169 Ga0065165_10001695 315
217 3300005347 Ga0070668_100092959 Ga0070668_1000929592 315
218 3300005366 Ga0070659_100030058 Ga0070659_1000300585 315
219 3300005834 Ga0068851_10007743 Ga0068851_100077432 315
220 3300006353 Ga0075370_10200147 Ga0075370_102001471 315
221 3300009093 Ga0105240_10000011 Ga0105240_10000011323 315
222 3300010375 Ga0105239_10001802 Ga0105239_1000180216 315
223 3300013100 Ga0157373_10005028 Ga0157373_100050287 315
224 3300013102 Ga0157371_10000141 Ga0157371_100001413 315
225 3300013104 Ga0157370_10013182 Ga0157370_100131822 315
226 3300013105 Ga0157369_10190122 Ga0157369_101901223 315
227 3300013307 Ga0157372_10000061 Ga0157372_1000006191 315
228 3300017792 Ga0163161_10007031 Ga0163161_100070316 315
229 3300025261 Ga0209233_1005538 Ga0209233_10055382 315
230 3300025292 Ga0209676_1000329 Ga0209676_100032918 315
231 3300025321 Ga0207656_10007764 Ga0207656_100077645 315
232 3300025904 Ga0207647_10000545 Ga0207647_1000054522 315
233 3300025913 Ga0207695_10000010 Ga0207695_10000010713 315
234 3300025932 Ga0207690_10017934 Ga0207690_100179345 315
235 3300026116 Ga0207674_10089105 Ga0207674_100891053 315
236 3300028786 Ga0307517_10007634 Ga0307517_1000763410 315
237 3300031731 Ga0307405_10061159 Ga0307405_100611592 315
238 3300031911 Ga0307412_10369236 Ga0307412_103692362 315
239 3300032004 Ga0307414_10093623 Ga0307414_100936233 315
240 3300045051 Ga0451576_0000002 Ga0451576_0000002_289200_290150 315
241 3300048918 Ga0496115_0434420 Ga0496115_0434420_23_1003 315
242 3300048928 Ga0496125_0000310 Ga0496125_0000310_50576_51556 315
243 3300048929 Ga0496126_0015732 Ga0496126_0015732_1671_2651 315
244 3300053080 Ga0500635_0001571 Ga0500635_0001571_1660_2616 315
245 3300053130 Ga0500642_0098529 Ga0500642_0098529_97_1071 315
246 iso_pu_bacteria 2965320100 2965322491 315
247 3300005288 Ga0065714_10073354 Ga0065714_100733544 316
248 3300005327 Ga0070658_10054949 Ga0070658_100549492 316
249 3300009093 Ga0105240_10589750 Ga0105240_105897501 316
250 3300010375 Ga0105239_10000002 Ga0105239_1000000298 316
251 3300013104 Ga0157370_10027725 Ga0157370_100277254 316
252 3300025261 Ga0209233_1023846 Ga0209233_10238462 316
253 3300031251 Ga0265327_10000319 Ga0265327_1000031967 316
254 3300037312 Ga0395899_0000001 Ga0395899_0000001_1664831_1665784 316
255 3300042876 Ga0451577_0008556 Ga0451577_0008556_5608_6564 316
256 3300045051 Ga0451576_0665580 Ga0451576_0665580_119_1075 316
257 3300046507 Ga0495606_0008159 Ga0495606_0008159_1308_2273 316
258 3300046616 Ga0495668_0000138 Ga0495668_0000138_106985_107965 316
259 3300047472 Ga0495686_0003397 Ga0495686_0003397_1774_2733 316
260 3300053104 Ga0500556_0043261 Ga0500556_0043261_329_1309 316
261 3300053125 Ga0500618_000158 Ga0500618_000158_44905_45870 316
262 3300053153 Ga0500616_0003690 Ga0500616_0003690_7889_8869 316
263 3300053157 Ga0500624_001113 Ga0500624_001113_539_1504 316
264 iso_pu_bacteria 2919683626 2919685122 316
265 3300005578 Ga0068854_100086656 Ga0068854_1000866561 317
266 3300006195 Ga0075366_10000700 Ga0075366_1000070013 317
267 3300009093 Ga0105240_10012361 Ga0105240_1001236113 317
268 3300009093 Ga0105240_10406027 Ga0105240_104060272 317
269 3300009545 Ga0105237_10179865 Ga0105237_101798652 317
270 3300021384 Ga0213876_10010743 Ga0213876_100107432 317
271 3300025904 Ga0207647_10000139 Ga0207647_1000013916 317
272 3300025914 Ga0207671_10000150 Ga0207671_1000015044 317
273 3300025981 Ga0207640_10041361 Ga0207640_100413613 317
274 3300032004 Ga0307414_10069907 Ga0307414_100699073 317
275 3300032004 Ga0307414_10246772 Ga0307414_102467722 317
276 3300039437 Ga0436365_1734381 Ga0436365_1734381_7637_8596 317
277 3300044765 Ga0466970_0176397 Ga0466970_0176397_130_1098 317
278 3300046453 Ga0495627_004514 Ga0495627_004514_3081_4058 317
279 3300046660 Ga0495625_0041694 Ga0495625_0041694_810_1778 317
280 3300053156 Ga0500622_0001412 Ga0500622_0001412_8710_9678 317
281 3300001915 JGI24741J21665_1020034 JGI24741J21665_10200341 318
282 3300005455 Ga0070663_100281224 Ga0070663_1002812241 318
283 3300013102 Ga0157371_10012304 Ga0157371_100123041 318
284 3300013105 Ga0157369_10000475 Ga0157369_1000047545 318
285 3300013307 Ga0157372_10005116 Ga0157372_100051161 318
286 3300026067 Ga0207678_10053551 Ga0207678_100535512 318
287 3300037312 Ga0395899_0000382 Ga0395899_0000382_26717_27673 318
288 3300044656 Ga0466969_0115944 Ga0466969_0115944_203_1159 318

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08279

HTH_11

HTH domain

34

87

0.96

PF08220

HTH_DeoR

DeoR-like helix-turn-helix domain

34

84

0.94

PF13280

WYL

WYL domain

166

339

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2quf-assembly1.cif.gz_A crystal structure of transcription factor axxa-pf0095 from pyrococcus furiosus 0.89 6 62
4wf2-assembly1.cif.gz_A structure of e. coli bira g142a bound to biotinol-5'-amp 0.8873 5 66
1bia-assembly1.cif.gz_A the e. coli biotin holoenzyme synthetase(slash)bio repressor crystal structure delineates the biotin and dna-binding domains 0.8821 7 66
1u2w-assembly1.cif.gz_A crystal structure of the staphylococcus aureus pi258 cadc 0.8492 8 60
3f72-assembly3.cif.gz_F crystal structure of the staphylococcus aureus pi258 cadc metal binding site 2 mutant 0.8434 8 60
ID Description Score Start End Superfamily
4a0zA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9881 3 44 1.10.10.10
4a0yA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9821 1 44 1.10.10.10
4a12C01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.958 1 44 1.10.10.10
4a12A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9564 6 44 1.10.10.10
4a12D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9514 6 44 1.10.10.10
ID Description Score Start End GO Terms
AF-G9PV77-F1-model_v4 deleted 0.9453 141 208
AF-A0A1F6PI14-F1-model_v4 WYL domain-containing protein 0.9372 140 218
AF-A0A2M8N575-F1-model_v4 WYL domain-containing protein 0.9353 142 211
AF-A0A2N6E8Z0-F1-model_v4 WYL domain-containing protein 0.9204 139 219
AF-A0A1F6PI14-F1-model_v4 WYL domain-containing protein 0.9149 140 218

Feature Viewer

pLDDT pTM Quality
83.43 0.54 Medium
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Predicted Structure (AlphaFold2)

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