F388512

General Info

Members Datasets Scaffolds Average Seq Length
288 155 288 243

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100001856|Ga0075428_1000018563
Length 263
Sequence VCTSRATHVQSGELMSIESPADWQGLKEVARVARLTLDALVRQVGPGVTTGELDVTAARLLAVHGARSAPALVYGFPGTVLISINDEVVHGIPGPRRIAPGDIVKIDVTIEKDGYVADAARSVVVEPASGVAHRLVACATAAFQAALGVARAGVRVNEIGRAVEREVGRRGFSVVAGLCGHGVGRTIHEAPSVPNQYDRFQQDELTEGLVITIEPMVTAGSSRVVQDKDGWTLRTRDGSLSAHHEQTLVITRGAPIVLTGAPA

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
117 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
123 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
124 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
125 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
126 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
127 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
128 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
129 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
141 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
142 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.04
Nodule 0
Rhizoplane 1.39
Rhizosphere 97.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10027733 3300005290 Unclassified 1332
2 Ga0065712_10071562 3300005290 Bacteria 5186
3 Ga0065712_10073153 3300005290 Bacteria 4484
4 Ga0065712_10199993 3300005290 Bacteria 1112
5 Ga0065715_10122769 3300005293 Unclassified 2196
6 Ga0065715_10130548 3300005293 Bacteria 2024
7 Ga0065715_10261411 3300005293 Bacteria 1137
8 Ga0065707_10108156 3300005295 Bacteria 2517
9 Ga0065707_10309797 3300005295 Bacteria 953
10 Ga0070658_10077886 3300005327 Bacteria 2720
11 Ga0070676_10085062 3300005328 Bacteria 1926
12 Ga0070676_10117283 3300005328 Bacteria 1666
13 Ga0070690_100201674 3300005330 Bacteria 1384
14 Ga0070670_100008903 3300005331 Bacteria 8569
15 Ga0070670_100266543 3300005331 Unclassified 1494
16 Ga0070670_100437762 3300005331 Bacteria 1157
17 Ga0070677_10044443 3300005333 Bacteria 1768
18 Ga0068869_100055982 3300005334 Bacteria 2875
19 Ga0070666_10395719 3300005335 Bacteria 993
20 Ga0068868_100342307 3300005338 Bacteria 1279
21 Ga0070689_100291960 3300005340 Bacteria 1355
22 Ga0070689_100658012 3300005340 Unclassified 912
23 Ga0070661_100087880 3300005344 Bacteria 2300
24 Ga0070669_100006893 3300005353 Bacteria 8165
25 Ga0070669_100100988 3300005353 Bacteria 2176
26 Ga0070669_100291854 3300005353 Bacteria 1309
27 Ga0070669_100462851 3300005353 Unclassified 1047
28 Ga0070675_100003942 3300005354 Bacteria 11248
29 Ga0070675_100004588 3300005354 Bacteria 10548
30 Ga0070675_100008333 3300005354 Bacteria 8042
31 Ga0070675_100027305 3300005354 Bacteria 4585
32 Ga0070675_100048328 3300005354 Bacteria 3488
33 Ga0070675_100060665 3300005354 Bacteria 3122
34 Ga0070675_100549146 3300005354 Bacteria 1045
35 Ga0070671_100091485 3300005355 Bacteria 2548
36 Ga0070673_100009801 3300005364 Bacteria 6451
37 Ga0070673_100013462 3300005364 Bacteria 5659
38 Ga0070673_100112294 3300005364 Bacteria 2262
39 Ga0070667_100140545 3300005367 Bacteria 2114
40 Ga0070713_100003844 3300005436 Bacteria 9947
41 Ga0070701_10011789 3300005438 Bacteria 3924
42 Ga0070705_100224187 3300005440 Bacteria 1303
43 Ga0070700_100041025 3300005441 Bacteria 2836
44 Ga0070678_100045685 3300005456 Bacteria 3135
45 Ga0070678_100230240 3300005456 Bacteria 1545
46 Ga0070678_100260703 3300005456 Bacteria 1458
47 Ga0070678_100284759 3300005456 Bacteria 1399
48 Ga0070678_100329783 3300005456 Bacteria 1306
49 Ga0070678_100435735 3300005456 Unclassified 1145
50 Ga0070679_100023377 3300005530 Bacteria 6049
51 Ga0070684_100774676 3300005535 Bacteria 896
52 Ga0068853_100411849 3300005539 Bacteria 1266
53 Ga0070672_100006464 3300005543 Bacteria 7879
54 Ga0070672_100028447 3300005543 Unclassified 4182
55 Ga0070672_100034250 3300005543 Bacteria 3853
56 Ga0070672_100072371 3300005543 Bacteria 2745
57 Ga0070672_100099123 3300005543 Bacteria 2361
58 Ga0070693_100024849 3300005547 Bacteria 3218
59 Ga0070665_100094318 3300005548 Unclassified 2997
60 Ga0070665_100541374 3300005548 Bacteria 1176
61 Ga0070704_100242436 3300005549 Bacteria 1476
62 Ga0070704_100387014 3300005549 Bacteria 1190
63 Ga0070664_100012014 3300005564 Bacteria 7034
64 Ga0070664_100637181 3300005564 Bacteria 990
65 Ga0068854_100034572 3300005578 Bacteria 3532
66 Ga0070702_100029035 3300005615 Bacteria 3003
67 Ga0068852_100470346 3300005616 Bacteria 1247
68 Ga0068859_100065218 3300005617 Bacteria 3676
69 Ga0068859_100255583 3300005617 Bacteria 1843
70 Ga0068859_101147517 3300005617 Bacteria 855
71 Ga0068866_10077277 3300005718 Bacteria 1778
72 Ga0068861_100080412 3300005719 Bacteria 2550
73 Ga0068861_100085685 3300005719 Bacteria 2475
74 Ga0068861_100488392 3300005719 Unclassified 1111
75 Ga0068870_10072303 3300005840 Bacteria 1884
76 Ga0068863_100391977 3300005841 Bacteria 1357
77 Ga0068858_100150478 3300005842 Bacteria 2188
78 Ga0068858_100329537 3300005842 Bacteria 1460
79 Ga0068860_100007232 3300005843 Bacteria 11099
80 Ga0068862_100278941 3300005844 Bacteria 1531
81 Ga0068862_100745007 3300005844 Bacteria 953
82 Ga0075364_10033328 3300006051 Bacteria 3316
83 Ga0097621_100107006 3300006237 Bacteria 2359
84 Ga0097621_100697433 3300006237 Bacteria 934
85 Ga0075428_100001856 3300006844 Bacteria 22643
86 Ga0075428_100009023 3300006844 Bacteria 11065
87 Ga0075428_100019599 3300006844 Bacteria 7485
88 Ga0075428_100027912 3300006844 Bacteria 6246
89 Ga0075428_100078786 3300006844 Bacteria 3596
90 Ga0075428_100220614 3300006844 Bacteria 2047
91 Ga0075428_100401413 3300006844 Unclassified 1469
92 Ga0075428_100680764 3300006844 Bacteria 1096
93 Ga0075428_100705277 3300006844 Bacteria 1075
94 Ga0075428_100859781 3300006844 Bacteria 963
95 Ga0075430_100007933 3300006846 Bacteria 8976
96 Ga0075430_100051856 3300006846 Unclassified 3455
97 Ga0075430_100147565 3300006846 Bacteria 1959
98 Ga0075430_100264146 3300006846 Bacteria 1425
99 Ga0075430_100322424 3300006846 Bacteria 1277
100 Ga0075430_100554199 3300006846 Unclassified 948
101 Ga0075431_100436895 3300006847 Bacteria 1306
102 Ga0075433_10041454 3300006852 Bacteria 3989
103 Ga0075434_100160344 3300006871 Bacteria 2269
104 Ga0075434_100169539 3300006871 Unclassified 2203
105 Ga0075429_100021762 3300006880 Bacteria 5560
106 Ga0075429_100239038 3300006880 Bacteria 1591
107 Ga0068865_100008591 3300006881 Bacteria 6314
108 Ga0068865_100032449 3300006881 Bacteria 3488
109 Ga0068865_100198355 3300006881 Bacteria 1557
110 Ga0097620_100065220 3300006931 Bacteria 3676
111 Ga0097620_100255594 3300006931 Bacteria 1843
112 Ga0097620_101147756 3300006931 Bacteria 855
113 Ga0075435_100001863 3300007076 Bacteria 13704
114 Ga0111539_10001068 3300009094 Bacteria 36134
115 Ga0111539_10004139 3300009094 Bacteria 19023
116 Ga0111539_10220751 3300009094 Bacteria 2208
117 Ga0111539_10586214 3300009094 Bacteria 1298
118 Ga0105247_10149121 3300009101 Bacteria 1540
119 Ga0114129_10000705 3300009147 Bacteria 42129
120 Ga0114129_10022418 3300009147 Bacteria 8966
121 Ga0114129_10083003 3300009147 Bacteria 4452
122 Ga0114129_10214180 3300009147 Unclassified 2602
123 Ga0114129_10443601 3300009147 Bacteria 1703
124 Ga0114129_10848643 3300009147 Bacteria 1161
125 Ga0105243_10006294 3300009148 Bacteria 9174
126 Ga0105241_10223849 3300009174 Bacteria 1583
127 Ga0105242_10003303 3300009176 Bacteria 12558
128 Ga0105242_10260359 3300009176 Bacteria 1567
129 Ga0105248_11412596 3300009177 Unclassified 787
130 Ga0105238_10008703 3300009551 Bacteria 10154
131 Ga0105239_10442210 3300010375 Bacteria 1474
132 Ga0105246_10039907 3300011119 Bacteria 3165
133 Ga0157373_10008139 3300013100 Bacteria 7798
134 Ga0157369_10374016 3300013105 Bacteria 1479
135 Ga0157374_10037343 3300013296 Unclassified 4458
136 Ga0157375_10133610 3300013308 Unclassified 2603
137 Ga0163163_10045734 3300014325 Bacteria 4298
138 Ga0163163_10060615 3300014325 Bacteria 3747
139 Ga0157380_10015915 3300014326 Bacteria 5535
140 Ga0157380_10077908 3300014326 Bacteria 2703
141 Ga0157380_10097680 3300014326 Unclassified 2438
142 Ga0157380_10751106 3300014326 Bacteria 987
143 Ga0182008_10003194 3300014497 Bacteria 10014
144 Ga0157377_10030538 3300014745 Unclassified 2920
145 Ga0157377_10060109 3300014745 Bacteria 2169
146 Ga0157376_10086921 3300014969 Bacteria 2696
147 Ga0157376_10262545 3300014969 Bacteria 1619
148 Ga0207682_10003094 3300025893 Bacteria 7290
149 Ga0207688_10165983 3300025901 Bacteria 1311
150 Ga0207680_10105212 3300025903 Bacteria 1820
151 Ga0207680_10203580 3300025903 Bacteria 1350
152 Ga0207645_10004159 3300025907 Bacteria 10750
153 Ga0207645_10004899 3300025907 Bacteria 9818
154 Ga0207643_10021512 3300025908 Bacteria 3544
155 Ga0207643_10298152 3300025908 Bacteria 1003
156 Ga0207654_10347277 3300025911 Bacteria 1021
157 Ga0207707_10017768 3300025912 Bacteria 6202
158 Ga0207662_10005501 3300025918 Bacteria 6762
159 Ga0207662_10072520 3300025918 Bacteria 2087
160 Ga0207681_10016388 3300025923 Bacteria 4636
161 Ga0207681_10025603 3300025923 Bacteria 3797
162 Ga0207681_10111330 3300025923 Unclassified 1992
163 Ga0207681_10260725 3300025923 Bacteria 1357
164 Ga0207650_10132186 3300025925 Bacteria 1954
165 Ga0207659_10001526 3300025926 Bacteria 13744
166 Ga0207659_10057947 3300025926 Unclassified 2780
167 Ga0207659_10088966 3300025926 Bacteria 2301
168 Ga0207659_10123202 3300025926 Bacteria 1989
169 Ga0207659_10504928 3300025926 Unclassified 1024
170 Ga0207659_10520208 3300025926 Bacteria 1009
171 Ga0207700_10348989 3300025928 Bacteria 1288
172 Ga0207644_10042081 3300025931 Bacteria 3235
173 Ga0207706_10032322 3300025933 Bacteria 4661
174 Ga0207686_10139841 3300025934 Bacteria 1672
175 Ga0207709_10037802 3300025935 Bacteria 2870
176 Ga0207709_10048656 3300025935 Bacteria 2584
177 Ga0207670_10222735 3300025936 Bacteria 1445
178 Ga0207669_10051339 3300025937 Bacteria 2470
179 Ga0207669_10057132 3300025937 Bacteria 2374
180 Ga0207669_10436449 3300025937 Bacteria 1034
181 Ga0207669_10439398 3300025937 Bacteria 1031
182 Ga0207704_10004969 3300025938 Bacteria 6117
183 Ga0207704_10169831 3300025938 Bacteria 1563
184 Ga0207691_10003821 3300025940 Bacteria 14615
185 Ga0207691_10023908 3300025940 Bacteria 5750
186 Ga0207691_10040460 3300025940 Bacteria 4305
187 Ga0207691_10070671 3300025940 Bacteria 3151
188 Ga0207691_10146228 3300025940 Bacteria 2081
189 Ga0207711_10058868 3300025941 Bacteria 3307
190 Ga0207689_10001183 3300025942 Bacteria 25083
191 Ga0207689_10422233 3300025942 Bacteria 1113
192 Ga0207679_10069172 3300025945 Bacteria 2655
193 Ga0207651_10011826 3300025960 Bacteria 4902
194 Ga0207651_10070187 3300025960 Bacteria 2477
195 Ga0207651_10281562 3300025960 Bacteria 1374
196 Ga0207712_10724318 3300025961 Bacteria 870
197 Ga0207668_10147225 3300025972 Bacteria 1819
198 Ga0207658_10268159 3300025986 Bacteria 1458
199 Ga0207658_10453277 3300025986 Bacteria 1136
200 Ga0207677_10033779 3300026023 Unclassified 3304
201 Ga0207677_10584439 3300026023 Unclassified 978
202 Ga0207703_10022707 3300026035 Bacteria 4927
203 Ga0207708_10007070 3300026075 Bacteria 8292
204 Ga0207708_10027916 3300026075 Bacteria 4273
205 Ga0207641_10094141 3300026088 Bacteria 2627
206 Ga0207641_10332851 3300026088 Bacteria 1443
207 Ga0207648_10003634 3300026089 Bacteria 16131
208 Ga0207676_10027160 3300026095 Bacteria 4261
209 Ga0207675_100122607 3300026118 Bacteria 2460
210 Ga0207675_100246964 3300026118 Bacteria 1726
211 Ga0207675_100507961 3300026118 Bacteria 1201
212 Ga0207675_100597654 3300026118 Bacteria 1106
213 Ga0207683_10060808 3300026121 Bacteria 3321
214 Ga0207683_10078274 3300026121 Bacteria 2929
215 Ga0207683_10098032 3300026121 Bacteria 2615
216 Ga0207683_10324593 3300026121 Bacteria 1410
217 Ga0207683_10349583 3300026121 Bacteria 1357
218 Ga0207683_10485737 3300026121 Bacteria 1140
219 Ga0209968_1019599 3300027526 Unclassified 1090
220 Ga0207428_10005403 3300027907 Bacteria 11920
221 Ga0207428_10041006 3300027907 Bacteria 3750
222 Ga0207428_10303704 3300027907 Bacteria 1181
223 Ga0268264_10770962 3300028381 Bacteria 959
224 Ga0307408_100012106 3300031548 Bacteria 5710
225 Ga0307408_100059668 3300031548 Bacteria 2777
226 Ga0307409_100109365 3300031995 Unclassified 2314
227 Ga0307416_100006741 3300032002 Bacteria 7220
228 Ga0307416_100065523 3300032002 Bacteria 2986
229 Ga0307416_100121700 3300032002 Bacteria 2327
230 Ga0307416_100461152 3300032002 Bacteria 1326
231 Ga0307411_10084088 3300032005 Unclassified 2200
232 Ga0307411_10297200 3300032005 Bacteria 1293
233 Ga0307415_100164826 3300032126 Unclassified 1722
234 Ga0373934_0159710 3300035086 Bacteria 925
235 Ga0373936_0206009 3300035113 Bacteria 869
236 Ga0373935_0383793 3300035692 Bacteria 1006
237 Ga0373933_0002054 3300035724 Bacteria 11570
238 Ga0373947_0242367 3300035725 Bacteria 1190
239 Ga0373937_0001203 3300036401 Bacteria 21757
240 Ga0373925_0013257 3300037068 Bacteria 5965
241 Ga0439443_013259 3300042003 Bacteria 1230
242 Ga0439435_0012700 3300042436 Bacteria 2047
243 Ga0439464_0004934 3300042439 Bacteria 3427
244 Ga0495603_0174411 3300046455 Bacteria 1245
245 Ga0495608_0023890 3300046511 Bacteria 4182
246 Ga0495643_0021118 3300046522 Bacteria 3741
247 Ga0495647_0065573 3300046681 Bacteria 1442
248 Ga0495658_0039959 3300046683 Bacteria 2606
249 Ga0496102_0332629 3300048905 Bacteria 1431
250 Ga0496104_0586754 3300048907 Unclassified 1025
251 Ga0496113_0092366 3300048916 Unclassified 2334
252 Ga0496114_0245900 3300048917 Bacteria 1574
253 Ga0501292_003689 3300049515 Unclassified 2060
254 Ga0501034_0046736 3300049571 Bacteria 4373
255 Ga0501072_0415072 3300049588 Bacteria 1067
256 Ga0501073_0071312 3300049589 Bacteria 2421
257 Ga0501076_0276955 3300049592 Bacteria 1374
258 Ga0501076_0671492 3300049592 Unclassified 855
259 Ga0501207_062190 3300049654 Unclassified 686
260 Ga0501233_032000 3300049668 Unclassified 1194
261 Ga0501235_007872 3300049669 Unclassified 2323
262 Ga0501079_0264648 3300049741 Bacteria 1344
263 Ga0501083_0032919 3300049744 Bacteria 3551
264 Ga0501035_0617319 3300049822 Bacteria 882
265 nmdc:mga00v17_13980_c1 3300050491 Bacteria 3625
266 nmdc:mga05p37_2294_c2 3300050507 Bacteria 4425
267 nmdc:mga05p37_32630_c1 3300050507 Bacteria 6369
268 nmdc:mga05p37_557231_c1 3300050507 Bacteria 1303
269 nmdc:mga05p37_8349_c1 3300050507 Bacteria 12245
270 nmdc:mga09592_219309_c1 3300050508 Bacteria 1648
271 nmdc:mga09592_24323_c1 3300050508 Bacteria 5008
272 nmdc:mga09592_34946_c1 3300050508 Bacteria 4204
273 nmdc:mga0qj67_140424_c1 3300050509 Bacteria 1958
274 nmdc:mga0qj67_145079_c1 3300050509 Bacteria 1924
275 nmdc:mga0qj67_215678_c1 3300050509 Bacteria 1558
276 nmdc:mga0qj67_329406_c1 3300050509 Bacteria 1236
277 nmdc:mga0qj67_6304_c1 3300050509 Bacteria 8707
278 nmdc:mga06r32_234110_c1 3300050510 Bacteria 1825
279 nmdc:mga06r32_5896_c1 3300050510 Bacteria 11029
280 nmdc:mga06r32_597393_c1 3300050510 Bacteria 1075
281 nmdc:mga06r32_6078_c1 3300050510 Bacteria 10847
282 nmdc:mga08y16_11972_c1 3300050511 Bacteria 9110
283 nmdc:mga08y16_48582_c1 3300050511 Bacteria 4440
284 nmdc:mga08y16_797401_c1 3300050511 Bacteria 937
285 nmdc:mga0n895_180306_c1 3300050512 Bacteria 2143
286 nmdc:mga08x19_206863_c1 3300050514 Bacteria 1346
287 nmdc:mga0a205_81455_c1 3300050515 Bacteria 3127
288 Ga0500555_002507 3300053103 Bacteria 5309

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025912 Ga0207707_10017768 Ga0207707_100177682 203
2 3300050510 nmdc:mga06r32_234110_c1 nmdc:mga06r32_234110_c1_33_677 208
3 3300050510 nmdc:mga06r32_6078_c1 nmdc:mga06r32_6078_c1_10171_10815 208
4 3300049654 Ga0501207_062190 Ga0501207_062190_16_666 210
5 3300005354 Ga0070675_100008333 Ga0070675_1000083334 216
6 3300005543 Ga0070672_100099123 Ga0070672_1000991233 216
7 3300005548 Ga0070665_100541374 Ga0070665_1005413741 216
8 3300005617 Ga0068859_101147517 Ga0068859_1011475171 216
9 3300005840 Ga0068870_10072303 Ga0068870_100723031 216
10 3300005844 Ga0068862_100745007 Ga0068862_1007450071 216
11 3300006931 Ga0097620_101147756 Ga0097620_1011477561 216
12 3300025908 Ga0207643_10021512 Ga0207643_100215123 216
13 3300025926 Ga0207659_10088966 Ga0207659_100889662 216
14 3300025940 Ga0207691_10146228 Ga0207691_101462283 216
15 3300027907 Ga0207428_10041006 Ga0207428_100410062 217
16 3300005353 Ga0070669_100100988 Ga0070669_1001009882 218
17 3300006846 Ga0075430_100554199 Ga0075430_1005541992 218
18 3300049588 Ga0501072_0415072 Ga0501072_0415072_221_907 221
19 3300006846 Ga0075430_100051856 Ga0075430_1000518565 222
20 3300006880 Ga0075429_100021762 Ga0075429_1000217624 222
21 3300035113 Ga0373936_0206009 Ga0373936_0206009_29_715 222
22 3300050514 nmdc:mga08x19_206863_c1 nmdc:mga08x19_206863_c1_210_950 224
23 3300053103 Ga0500555_002507 Ga0500555_002507_3469_4209 224
24 3300005295 Ga0065707_10108156 Ga0065707_101081563 225
25 3300027526 Ga0209968_1019599 Ga0209968_10195991 225
26 3300009094 Ga0111539_10586214 Ga0111539_105862141 226
27 3300031995 Ga0307409_100109365 Ga0307409_1001093652 226
28 3300032002 Ga0307416_100006741 Ga0307416_1000067412 226
29 3300032005 Ga0307411_10084088 Ga0307411_100840883 226
30 3300050511 nmdc:mga08y16_797401_c1 nmdc:mga08y16_797401_c1_151_894 226
31 3300009147 Ga0114129_10848643 Ga0114129_108486431 227
32 3300005327 Ga0070658_10077886 Ga0070658_100778861 228
33 3300005530 Ga0070679_100023377 Ga0070679_1000233774 228
34 3300005539 Ga0068853_100411849 Ga0068853_1004118493 228
35 3300006051 Ga0075364_10033328 Ga0075364_100333282 228
36 3300013100 Ga0157373_10008139 Ga0157373_100081397 228
37 3300013105 Ga0157369_10374016 Ga0157369_103740163 228
38 3300046522 Ga0495643_0021118 Ga0495643_0021118_856_1605 228
39 3300050491 nmdc:mga00v17_13980_c1 nmdc:mga00v17_13980_c1_2137_2877 228
40 3300005436 Ga0070713_100003844 Ga0070713_1000038442 229
41 3300025928 Ga0207700_10348989 Ga0207700_103489892 229
42 3300046511 Ga0495608_0023890 Ga0495608_0023890_2289_3017 229
43 3300049592 Ga0501076_0671492 Ga0501076_0671492_116_823 229
44 3300005354 Ga0070675_100003942 Ga0070675_1000039428 230
45 3300005543 Ga0070672_100028447 Ga0070672_1000284472 230
46 3300005548 Ga0070665_100094318 Ga0070665_1000943183 230
47 3300006844 Ga0075428_100705277 Ga0075428_1007052771 230
48 3300013296 Ga0157374_10037343 Ga0157374_100373432 230
49 3300013308 Ga0157375_10133610 Ga0157375_101336103 230
50 3300014969 Ga0157376_10262545 Ga0157376_102625452 230
51 3300025923 Ga0207681_10111330 Ga0207681_101113303 230
52 3300025926 Ga0207659_10001526 Ga0207659_1000152613 230
53 3300025937 Ga0207669_10436449 Ga0207669_104364491 230
54 3300025940 Ga0207691_10023908 Ga0207691_100239083 230
55 3300035692 Ga0373935_0383793 Ga0373935_0383793_239_982 230
56 3300005290 Ga0065712_10073153 Ga0065712_100731534 231
57 3300005331 Ga0070670_100437762 Ga0070670_1004377621 231
58 3300005535 Ga0070684_100774676 Ga0070684_1007746761 231
59 3300006844 Ga0075428_100027912 Ga0075428_1000279123 231
60 3300006846 Ga0075430_100264146 Ga0075430_1002641462 231
61 3300025925 Ga0207650_10132186 Ga0207650_101321862 231
62 3300050509 nmdc:mga0qj67_215678_c1 nmdc:mga0qj67_215678_c1_512_1261 231
63 3300049571 Ga0501034_0046736 Ga0501034_0046736_3439_4188 232
64 3300049744 Ga0501083_0032919 Ga0501083_0032919_2000_2749 232
65 3300035086 Ga0373934_0159710 Ga0373934_0159710_130_870 233
66 3300035724 Ga0373933_0002054 Ga0373933_0002054_793_1533 233
67 3300036401 Ga0373937_0001203 Ga0373937_0001203_19406_20146 233
68 3300005340 Ga0070689_100658012 Ga0070689_1006580121 234
69 3300005354 Ga0070675_100048328 Ga0070675_1000483284 235
70 3300005456 Ga0070678_100435735 Ga0070678_1004357351 235
71 3300025926 Ga0207659_10504928 Ga0207659_105049281 235
72 3300006852 Ga0075433_10041454 Ga0075433_100414543 236
73 3300009147 Ga0114129_10214180 Ga0114129_102141802 236
74 3300050515 nmdc:mga0a205_81455_c1 nmdc:mga0a205_81455_c1_1635_2384 236
75 3300005344 Ga0070661_100087880 Ga0070661_1000878803 237
76 3300005293 Ga0065715_10130548 Ga0065715_101305481 240
77 3300005295 Ga0065707_10309797 Ga0065707_103097971 240
78 3300005328 Ga0070676_10117283 Ga0070676_101172831 240
79 3300005330 Ga0070690_100201674 Ga0070690_1002016742 240
80 3300005335 Ga0070666_10395719 Ga0070666_103957192 240
81 3300005353 Ga0070669_100291854 Ga0070669_1002918542 240
82 3300005438 Ga0070701_10011789 Ga0070701_100117893 240
83 3300005440 Ga0070705_100224187 Ga0070705_1002241871 240
84 3300005441 Ga0070700_100041025 Ga0070700_1000410253 240
85 3300005456 Ga0070678_100284759 Ga0070678_1002847591 240
86 3300005543 Ga0070672_100034250 Ga0070672_1000342503 240
87 3300005547 Ga0070693_100024849 Ga0070693_1000248493 240
88 3300005549 Ga0070704_100242436 Ga0070704_1002424361 240
89 3300005549 Ga0070704_100387014 Ga0070704_1003870142 240
90 3300005578 Ga0068854_100034572 Ga0068854_1000345723 240
91 3300005615 Ga0070702_100029035 Ga0070702_1000290352 240
92 3300005616 Ga0068852_100470346 Ga0068852_1004703462 240
93 3300005617 Ga0068859_100255583 Ga0068859_1002555832 240
94 3300005842 Ga0068858_100150478 Ga0068858_1001504783 240
95 3300006237 Ga0097621_100697433 Ga0097621_1006974332 240
96 3300006844 Ga0075428_100401413 Ga0075428_1004014132 240
97 3300006844 Ga0075428_100680764 Ga0075428_1006807642 240
98 3300006844 Ga0075428_100859781 Ga0075428_1008597812 240
99 3300006847 Ga0075431_100436895 Ga0075431_1004368952 240
100 3300006880 Ga0075429_100239038 Ga0075429_1002390381 240
101 3300006931 Ga0097620_100255594 Ga0097620_1002555942 240
102 3300007076 Ga0075435_100001863 Ga0075435_10000186310 240
103 3300009101 Ga0105247_10149121 Ga0105247_101491212 240
104 3300009147 Ga0114129_10443601 Ga0114129_104436012 240
105 3300009174 Ga0105241_10223849 Ga0105241_102238493 240
106 3300009176 Ga0105242_10260359 Ga0105242_102603593 240
107 3300010375 Ga0105239_10442210 Ga0105239_104422102 240
108 3300014326 Ga0157380_10097680 Ga0157380_100976802 240
109 3300014497 Ga0182008_10003194 Ga0182008_100031943 240
110 3300014969 Ga0157376_10086921 Ga0157376_100869214 240
111 3300025901 Ga0207688_10165983 Ga0207688_101659832 240
112 3300025903 Ga0207680_10105212 Ga0207680_101052123 240
113 3300025907 Ga0207645_10004159 Ga0207645_100041599 240
114 3300025911 Ga0207654_10347277 Ga0207654_103472771 240
115 3300025918 Ga0207662_10005501 Ga0207662_100055019 240
116 3300025923 Ga0207681_10025603 Ga0207681_100256033 240
117 3300025931 Ga0207644_10042081 Ga0207644_100420814 240
118 3300025933 Ga0207706_10032322 Ga0207706_100323224 240
119 3300025934 Ga0207686_10139841 Ga0207686_101398412 240
120 3300025935 Ga0207709_10048656 Ga0207709_100486562 240
121 3300025937 Ga0207669_10057132 Ga0207669_100571321 240
122 3300025940 Ga0207691_10070671 Ga0207691_100706713 240
123 3300025941 Ga0207711_10058868 Ga0207711_100588685 240
124 3300025942 Ga0207689_10422233 Ga0207689_104222331 240
125 3300025960 Ga0207651_10011826 Ga0207651_100118263 240
126 3300025961 Ga0207712_10724318 Ga0207712_107243181 240
127 3300026075 Ga0207708_10027916 Ga0207708_100279166 240
128 3300026088 Ga0207641_10094141 Ga0207641_100941413 240
129 3300026121 Ga0207683_10098032 Ga0207683_100980322 240
130 3300028381 Ga0268264_10770962 Ga0268264_107709622 240
131 3300037068 Ga0373925_0013257 Ga0373925_0013257_4257_4997 240
132 3300048905 Ga0496102_0332629 Ga0496102_0332629_514_1254 240
133 3300050507 nmdc:mga05p37_557231_c1 nmdc:mga05p37_557231_c1_119_859 240
134 3300050510 nmdc:mga06r32_597393_c1 nmdc:mga06r32_597393_c1_70_810 240
135 3300005290 Ga0065712_10071562 Ga0065712_100715626 241
136 3300005290 Ga0065712_10199993 Ga0065712_101999932 241
137 3300005293 Ga0065715_10122769 Ga0065715_101227693 241
138 3300005293 Ga0065715_10261411 Ga0065715_102614111 241
139 3300005328 Ga0070676_10085062 Ga0070676_100850623 241
140 3300005331 Ga0070670_100266543 Ga0070670_1002665432 241
141 3300005333 Ga0070677_10044443 Ga0070677_100444432 241
142 3300005334 Ga0068869_100055982 Ga0068869_1000559824 241
143 3300005338 Ga0068868_100342307 Ga0068868_1003423072 241
144 3300005340 Ga0070689_100291960 Ga0070689_1002919601 241
145 3300005353 Ga0070669_100006893 Ga0070669_1000068936 241
146 3300005353 Ga0070669_100462851 Ga0070669_1004628511 241
147 3300005354 Ga0070675_100004588 Ga0070675_1000045882 241
148 3300005354 Ga0070675_100027305 Ga0070675_1000273052 241
149 3300005354 Ga0070675_100060665 Ga0070675_1000606652 241
150 3300005354 Ga0070675_100549146 Ga0070675_1005491461 241
151 3300005355 Ga0070671_100091485 Ga0070671_1000914851 241
152 3300005364 Ga0070673_100009801 Ga0070673_1000098012 241
153 3300005364 Ga0070673_100013462 Ga0070673_1000134623 241
154 3300005364 Ga0070673_100112294 Ga0070673_1001122943 241
155 3300005367 Ga0070667_100140545 Ga0070667_1001405451 241
156 3300005456 Ga0070678_100045685 Ga0070678_1000456854 241
157 3300005456 Ga0070678_100230240 Ga0070678_1002302401 241
158 3300005456 Ga0070678_100260703 Ga0070678_1002607032 241
159 3300005456 Ga0070678_100329783 Ga0070678_1003297832 241
160 3300005543 Ga0070672_100006464 Ga0070672_1000064643 241
161 3300005543 Ga0070672_100072371 Ga0070672_1000723713 241
162 3300005564 Ga0070664_100637181 Ga0070664_1006371811 241
163 3300005617 Ga0068859_100065218 Ga0068859_1000652186 241
164 3300005718 Ga0068866_10077277 Ga0068866_100772772 241
165 3300005719 Ga0068861_100080412 Ga0068861_1000804124 241
166 3300005719 Ga0068861_100085685 Ga0068861_1000856853 241
167 3300005719 Ga0068861_100488392 Ga0068861_1004883922 241
168 3300005841 Ga0068863_100391977 Ga0068863_1003919771 241
169 3300005842 Ga0068858_100329537 Ga0068858_1003295372 241
170 3300005843 Ga0068860_100007232 Ga0068860_1000072322 241
171 3300005844 Ga0068862_100278941 Ga0068862_1002789411 241
172 3300006237 Ga0097621_100107006 Ga0097621_1001070063 241
173 3300006844 Ga0075428_100019599 Ga0075428_10001959910 241
174 3300006844 Ga0075428_100220614 Ga0075428_1002206142 241
175 3300006846 Ga0075430_100322424 Ga0075430_1003224242 241
176 3300006871 Ga0075434_100160344 Ga0075434_1001603443 241
177 3300006871 Ga0075434_100169539 Ga0075434_1001695392 241
178 3300006881 Ga0068865_100008591 Ga0068865_1000085913 241
179 3300006881 Ga0068865_100032449 Ga0068865_1000324492 241
180 3300006881 Ga0068865_100198355 Ga0068865_1001983552 241
181 3300006931 Ga0097620_100065220 Ga0097620_1000652206 241
182 3300009094 Ga0111539_10004139 Ga0111539_100041395 241
183 3300009147 Ga0114129_10022418 Ga0114129_1002241811 241
184 3300009147 Ga0114129_10083003 Ga0114129_100830032 241
185 3300009148 Ga0105243_10006294 Ga0105243_1000629414 241
186 3300009176 Ga0105242_10003303 Ga0105242_1000330312 241
187 3300009177 Ga0105248_11412596 Ga0105248_114125961 241
188 3300009551 Ga0105238_10008703 Ga0105238_1000870312 241
189 3300011119 Ga0105246_10039907 Ga0105246_100399072 241
190 3300014325 Ga0163163_10045734 Ga0163163_100457346 241
191 3300014326 Ga0157380_10015915 Ga0157380_100159152 241
192 3300014326 Ga0157380_10077908 Ga0157380_100779083 241
193 3300014326 Ga0157380_10751106 Ga0157380_107511062 241
194 3300014745 Ga0157377_10030538 Ga0157377_100305383 241
195 3300025893 Ga0207682_10003094 Ga0207682_100030948 241
196 3300025907 Ga0207645_10004899 Ga0207645_100048993 241
197 3300025908 Ga0207643_10298152 Ga0207643_102981521 241
198 3300025918 Ga0207662_10072520 Ga0207662_100725202 241
199 3300025923 Ga0207681_10016388 Ga0207681_100163887 241
200 3300025923 Ga0207681_10260725 Ga0207681_102607252 241
201 3300025926 Ga0207659_10057947 Ga0207659_100579474 241
202 3300025926 Ga0207659_10123202 Ga0207659_101232022 241
203 3300025926 Ga0207659_10520208 Ga0207659_105202081 241
204 3300025935 Ga0207709_10037802 Ga0207709_100378025 241
205 3300025936 Ga0207670_10222735 Ga0207670_102227351 241
206 3300025937 Ga0207669_10051339 Ga0207669_100513391 241
207 3300025937 Ga0207669_10439398 Ga0207669_104393982 241
208 3300025938 Ga0207704_10004969 Ga0207704_100049696 241
209 3300025938 Ga0207704_10169831 Ga0207704_101698312 241
210 3300025940 Ga0207691_10003821 Ga0207691_1000382114 241
211 3300025940 Ga0207691_10040460 Ga0207691_100404605 241
212 3300025942 Ga0207689_10001183 Ga0207689_1000118314 241
213 3300025960 Ga0207651_10070187 Ga0207651_100701873 241
214 3300025960 Ga0207651_10281562 Ga0207651_102815622 241
215 3300025972 Ga0207668_10147225 Ga0207668_101472253 241
216 3300025986 Ga0207658_10268159 Ga0207658_102681592 241
217 3300025986 Ga0207658_10453277 Ga0207658_104532771 241
218 3300026023 Ga0207677_10033779 Ga0207677_100337794 241
219 3300026023 Ga0207677_10584439 Ga0207677_105844391 241
220 3300026035 Ga0207703_10022707 Ga0207703_100227078 241
221 3300026075 Ga0207708_10007070 Ga0207708_1000707011 241
222 3300026088 Ga0207641_10332851 Ga0207641_103328512 241
223 3300026089 Ga0207648_10003634 Ga0207648_1000363414 241
224 3300026095 Ga0207676_10027160 Ga0207676_100271603 241
225 3300026118 Ga0207675_100122607 Ga0207675_1001226072 241
226 3300026118 Ga0207675_100246964 Ga0207675_1002469642 241
227 3300026118 Ga0207675_100507961 Ga0207675_1005079612 241
228 3300026118 Ga0207675_100597654 Ga0207675_1005976542 241
229 3300026121 Ga0207683_10060808 Ga0207683_100608083 241
230 3300026121 Ga0207683_10078274 Ga0207683_100782743 241
231 3300026121 Ga0207683_10324593 Ga0207683_103245932 241
232 3300026121 Ga0207683_10349583 Ga0207683_103495832 241
233 3300026121 Ga0207683_10485737 Ga0207683_104857372 241
234 3300027907 Ga0207428_10303704 Ga0207428_103037042 241
235 3300031548 Ga0307408_100012106 Ga0307408_1000121066 241
236 3300032002 Ga0307416_100065523 Ga0307416_1000655233 241
237 3300032002 Ga0307416_100461152 Ga0307416_1004611521 241
238 3300035725 Ga0373947_0242367 Ga0373947_0242367_437_1180 241
239 3300046455 Ga0495603_0174411 Ga0495603_0174411_409_1152 241
240 3300046681 Ga0495647_0065573 Ga0495647_0065573_415_1158 241
241 3300046683 Ga0495658_0039959 Ga0495658_0039959_499_1242 241
242 3300048907 Ga0496104_0586754 Ga0496104_0586754_126_869 241
243 3300048916 Ga0496113_0092366 Ga0496113_0092366_1543_2286 241
244 3300048917 Ga0496114_0245900 Ga0496114_0245900_782_1525 241
245 3300049589 Ga0501073_0071312 Ga0501073_0071312_807_1550 241
246 3300049592 Ga0501076_0276955 Ga0501076_0276955_110_853 241
247 3300049741 Ga0501079_0264648 Ga0501079_0264648_284_1027 241
248 3300049822 Ga0501035_0617319 Ga0501035_0617319_93_836 241
249 3300050507 nmdc:mga05p37_2294_c2 nmdc:mga05p37_2294_c2_2674_3417 241
250 3300050507 nmdc:mga05p37_32630_c1 nmdc:mga05p37_32630_c1_3116_3859 241
251 3300050508 nmdc:mga09592_219309_c1 nmdc:mga09592_219309_c1_482_1225 241
252 3300050509 nmdc:mga0qj67_145079_c1 nmdc:mga0qj67_145079_c1_644_1387 241
253 3300050509 nmdc:mga0qj67_329406_c1 nmdc:mga0qj67_329406_c1_123_866 241
254 3300050509 nmdc:mga0qj67_6304_c1 nmdc:mga0qj67_6304_c1_4015_4758 241
255 3300050512 nmdc:mga0n895_180306_c1 nmdc:mga0n895_180306_c1_1045_1788 241
256 3300005331 Ga0070670_100008903 Ga0070670_1000089031 242
257 3300005564 Ga0070664_100012014 Ga0070664_10001201410 242
258 3300006844 Ga0075428_100078786 Ga0075428_1000787863 242
259 3300006846 Ga0075430_100147565 Ga0075430_1001475652 242
260 3300014325 Ga0163163_10060615 Ga0163163_100606152 242
261 3300014745 Ga0157377_10060109 Ga0157377_100601092 242
262 3300025945 Ga0207679_10069172 Ga0207679_100691724 242
263 3300050509 nmdc:mga0qj67_140424_c1 nmdc:mga0qj67_140424_c1_531_1277 242
264 3300005290 Ga0065712_10027733 Ga0065712_100277332 243
265 3300006844 Ga0075428_100001856 Ga0075428_1000018563 243
266 3300006844 Ga0075428_100009023 Ga0075428_1000090233 243
267 3300006846 Ga0075430_100007933 Ga0075430_10000793310 243
268 3300009094 Ga0111539_10001068 Ga0111539_100010682 243
269 3300009094 Ga0111539_10220751 Ga0111539_102207513 243
270 3300009147 Ga0114129_10000705 Ga0114129_1000070550 243
271 3300025903 Ga0207680_10203580 Ga0207680_102035801 243
272 3300027907 Ga0207428_10005403 Ga0207428_100054039 243
273 3300031548 Ga0307408_100059668 Ga0307408_1000596684 243
274 3300032002 Ga0307416_100121700 Ga0307416_1001217003 243
275 3300032005 Ga0307411_10297200 Ga0307411_102972002 243
276 3300032126 Ga0307415_100164826 Ga0307415_1001648262 243
277 3300042003 Ga0439443_013259 Ga0439443_013259_373_1122 243
278 3300042436 Ga0439435_0012700 Ga0439435_0012700_1039_1800 243
279 3300042439 Ga0439464_0004934 Ga0439464_0004934_425_1174 243
280 3300049515 Ga0501292_003689 Ga0501292_003689_34_783 243
281 3300049668 Ga0501233_032000 Ga0501233_032000_50_799 243
282 3300049669 Ga0501235_007872 Ga0501235_007872_315_1064 243
283 3300050507 nmdc:mga05p37_8349_c1 nmdc:mga05p37_8349_c1_10679_11428 243
284 3300050508 nmdc:mga09592_24323_c1 nmdc:mga09592_24323_c1_3330_4079 243
285 3300050508 nmdc:mga09592_34946_c1 nmdc:mga09592_34946_c1_3414_4163 243
286 3300050510 nmdc:mga06r32_5896_c1 nmdc:mga06r32_5896_c1_6242_6991 243
287 3300050511 nmdc:mga08y16_11972_c1 nmdc:mga08y16_11972_c1_7301_8050 243
288 3300050511 nmdc:mga08y16_48582_c1 nmdc:mga08y16_48582_c1_3167_3916 243

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00557

Peptidase_M24

Metallopeptidase family M24

24

252

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qxz-assembly1.cif.gz_A crystal structure of s. aureus methionine aminopeptidase in complex with a ketoheterocycle inhibitor 119 0.9756 1 240
1qxz-assembly1.cif.gz_A crystal structure of s. aureus methionine aminopeptidase in complex with a ketoheterocycle inhibitor 119 0.9598 1 240
4ook-assembly1.cif.gz_A third metal bound m.tuberculosis methionine aminopeptidase 0.9583 1 240
5yoi-assembly1.cif.gz_A mycobacterium tuberculosis methionine aminopeptidase type 1c (c105t mutant) in complex with methionine 0.9558 1 240
5yr4-assembly1.cif.gz_A human methionine aminopeptidase type 1b (f309m mutant) in complex with tnp470 0.9556 1 240
ID Description Score Start End Superfamily
af_Q8I3J2_42_327_3.90.230.10 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9702 3 239 3.90.230.10
4fukB01 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9643 8 242 3.90.230.10
af_Q6Z3V9_1_121_3.90.230.10 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9637 13 123 3.90.230.10
af_Q4D257_64_370_3.90.230.10 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9637 8 242 3.90.230.10
af_I1J6Q1_1_201_3.90.230.10 Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily 0.9636 47 240 3.90.230.10
ID Description Score Start End GO Terms
AF-A0A7V0UFF9-F1-model_v4 Methionine aminopeptidase (MAP) (MetAP) (EC 3.4.11.18) (Peptidase M) 0.9851 1 241 GO:0004239
GO:0006508
GO:0046872
GO:0070006
AF-A0A2M9Z970-F1-model_v4 Methionine aminopeptidase (MAP) (MetAP) (EC 3.4.11.18) (Peptidase M) 0.9797 1 241 GO:0004239
GO:0006508
GO:0046872
GO:0070006
AF-A0A2Z3YRT8-F1-model_v4 deleted 0.9779 1 240
AF-A0A351X0T7-F1-model_v4 Methionine aminopeptidase (MAP) (MetAP) (EC 3.4.11.18) (Peptidase M) 0.9768 1 240 GO:0004239
GO:0006508
GO:0046872
GO:0070006
AF-A0A6J7GSM4-F1-model_v4 Unannotated protein 0.9767 1 240 GO:0006508
GO:0070006

Feature Viewer

pLDDT pTM Quality
92.43 0.91 High
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Predicted Structure (AlphaFold2)

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Map