F388290

General Info

Members Datasets Scaffolds Average Seq Length
287 199 574 275

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2508501039|2508670335
Length 329
Sequence PPQTPAAGAAAPNVPDVPDAPDAPAVPAASAASAASAASTEPAPFGKSAGGSASTPAVEVVGVDKVFPVAGGGATIALTGIDLTVAPGEFVSLIGPSGCGKSTLLRLIGDLVEATRGEVRVFGESARAARQSQRYGIAFQQAGLLEWRTVAGNIELPLQVHGVKKKERRERARELLELVGLGDFAGHWPAQLSGGMQQRVAIARALAERPPLLLLDEPFGALDEMTRERMQAELARIRLETSTTVILVTHSIPEAVFLSDRVAVMSPRPGRITRIIDIDVPGRVPAPGESGGAPALEDAVAEAEDVREQAAFFQAVTAVREALRAGGDS

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
77 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
78 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
121 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
122 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
123 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
124 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
125 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
126 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
127 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
128 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
135 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
136 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
137 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
138 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
139 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
140 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
141 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
142 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
143 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
144 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
145 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
156 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
159 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
160 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
161 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
162 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
163 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
173 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
174 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
178 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
179 2508501039 Frankia saprophytica CN3 Isolate Nodule
180 2517572101 Frankia sp. DC12 Isolate Nodule
181 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
182 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
183 2619618881 Frankia sp. ACN1ag Isolate Unclassified
184 2619619003 Frankia sp. CpI1-P Isolate Nodule
185 2626541554 Frankia sp. AvcI.1 Isolate Nodule
186 2643221549 Agromyces sp. Root1464 Isolate Unclassified
187 2643221566 Microbacterium sp. Root166 Isolate Unclassified
188 2687453737 Frankia sp. BMG5.36 Isolate Nodule
189 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
190 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
191 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
192 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
193 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
194 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
195 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
196 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
197 8002784119 Frankia sp. AgB1.9 Isolate Nodule
198 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
199 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.64
Metatranscriptomes 1.05
Isolates 7.32

Biome Distribution

Category Percentage (%)
Aerial Root 0.35
Bulb 0
Endosphere 2.79
Nodule 2.09
Rhizoplane 6.27
Rhizosphere 76.66
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10001099 3300003203 Bacteria 12668
2 Ga0070658_10157213 3300005327 Bacteria 1906
3 Ga0070658_10345686 3300005327 Bacteria 1273
4 Ga0070670_100029545 3300005331 Bacteria 4719
5 Ga0068869_100005134 3300005334 Bacteria 8210
6 Ga0068869_100041920 3300005334 Bacteria 3279
7 Ga0070680_100012976 3300005336 Bacteria 6481
8 Ga0070682_100007230 3300005337 Bacteria 6255
9 Ga0068868_100081050 3300005338 Bacteria 2601
10 Ga0070660_100020233 3300005339 Bacteria 4888
11 Ga0070660_100049260 3300005339 Bacteria 3238
12 Ga0070691_10007470 3300005341 Bacteria 5011
13 Ga0070687_100050877 3300005343 Bacteria 2142
14 Ga0070661_100020423 3300005344 Bacteria 4722
15 Ga0070661_100042586 3300005344 Bacteria 3314
16 Ga0070692_10002768 3300005345 Bacteria 6906
17 Ga0070692_10206026 3300005345 Bacteria 1155
18 Ga0070668_100041782 3300005347 Bacteria 3513
19 Ga0070668_100072121 3300005347 Bacteria 2691
20 Ga0070675_100017195 3300005354 Bacteria 5747
21 Ga0070675_100072662 3300005354 Bacteria 2856
22 Ga0070675_100137957 3300005354 Bacteria 2082
23 Ga0070671_100005657 3300005355 Bacteria 9948
24 Ga0070671_100091388 3300005355 Bacteria 2549
25 Ga0070673_100173030 3300005364 Bacteria 1844
26 Ga0070659_100001097 3300005366 Bacteria 19735
27 Ga0070701_10019868 3300005438 Bacteria 3178
28 Ga0070705_100070026 3300005440 Bacteria 2117
29 Ga0070700_100027782 3300005441 Bacteria 3358
30 Ga0070663_100002917 3300005455 Bacteria 9728
31 Ga0070663_100129782 3300005455 Bacteria 1913
32 Ga0070663_100205797 3300005455 Bacteria 1538
33 Ga0070678_100011448 3300005456 Bacteria 5473
34 Ga0070681_10018792 3300005458 Bacteria 6917
35 Ga0070679_100051719 3300005530 Bacteria 4092
36 Ga0070672_100147470 3300005543 Bacteria 1945
37 Ga0070672_100211568 3300005543 Bacteria 1624
38 Ga0070672_100538772 3300005543 Bacteria 1013
39 Ga0070693_100000347 3300005547 Bacteria 21059
40 Ga0070665_100542954 3300005548 Bacteria 1174
41 Ga0070665_100580337 3300005548 Bacteria 1134
42 Ga0070665_100681817 3300005548 Bacteria 1041
43 Ga0068855_100125758 3300005563 Bacteria 2931
44 Ga0068855_100258721 3300005563 Bacteria 1940
45 Ga0070664_100029567 3300005564 Bacteria 4568
46 Ga0070664_100042059 3300005564 Bacteria 3858
47 Ga0068857_100245262 3300005577 Bacteria 1641
48 Ga0068854_100010009 3300005578 Bacteria 6139
49 Ga0068856_100019177 3300005614 Bacteria 6640
50 Ga0068856_100189340 3300005614 Bacteria 2071
51 Ga0070702_100002009 3300005615 Bacteria 8578
52 Ga0068852_100020662 3300005616 Bacteria 5237
53 Ga0068852_100175666 3300005616 Bacteria 2011
54 Ga0068852_100271626 3300005616 Bacteria 1631
55 Ga0068859_100002957 3300005617 Bacteria 17235
56 Ga0068859_100041923 3300005617 Bacteria 4598
57 Ga0068859_100367504 3300005617 Bacteria 1534
58 Ga0068864_100115588 3300005618 Bacteria 2393
59 Ga0068864_100205007 3300005618 Bacteria 1813
60 Ga0068851_10020568 3300005834 Bacteria 3197
61 Ga0068870_10001611 3300005840 Bacteria 9183
62 Ga0068863_100013760 3300005841 Bacteria 7798
63 Ga0068858_100064091 3300005842 Bacteria 3401
64 Ga0068858_100113678 3300005842 Bacteria 2528
65 Ga0068862_100000237 3300005844 Bacteria 61270
66 Ga0081455_10108436 3300005937 Bacteria 2211
67 Ga0081539_10000352 3300005985 Bacteria 100942
68 Ga0081539_10022554 3300005985 Bacteria 4161
69 Ga0081539_10039856 3300005985 Bacteria 2766
70 Ga0075432_10044424 3300006058 Bacteria 1558
71 Ga0097621_100212531 3300006237 Bacteria 1683
72 Ga0068871_100042170 3300006358 Bacteria 3662
73 Ga0075434_100006513 3300006871 Bacteria 10708
74 Ga0068865_100015526 3300006881 Bacteria 4859
75 Ga0075436_100001698 3300006914 Bacteria 15076
76 Ga0097620_100002957 3300006931 Bacteria 17235
77 Ga0097620_100041922 3300006931 Bacteria 4598
78 Ga0097620_100367526 3300006931 Bacteria 1534
79 Ga0075435_100040799 3300007076 Bacteria 3708
80 Ga0105244_10071335 3300009036 Bacteria 1732
81 Ga0105240_10182117 3300009093 Bacteria 2478
82 Ga0111539_10076564 3300009094 Bacteria 3939
83 Ga0105245_10010417 3300009098 Bacteria 8097
84 Ga0105245_10023473 3300009098 Bacteria 5415
85 Ga0105245_10149330 3300009098 Bacteria 2208
86 Ga0105243_10028698 3300009148 Bacteria 4273
87 Ga0105241_10004243 3300009174 Bacteria 10590
88 Ga0105248_10000034 3300009177 Bacteria 192324
89 Ga0105237_10044786 3300009545 Bacteria 4455
90 Ga0105237_10487506 3300009545 Bacteria 1239
91 Ga0105238_10040622 3300009551 Bacteria 4713
92 Ga0105249_10007146 3300009553 Bacteria 9744
93 Ga0105249_10791683 3300009553 Bacteria 1012
94 Ga0105239_10041277 3300010375 Bacteria 5056
95 Ga0105239_10133440 3300010375 Bacteria 2763
96 Ga0105239_10359767 3300010375 Bacteria 1644
97 Ga0105246_10009891 3300011119 Bacteria 5883
98 Ga0105246_10331047 3300011119 Bacteria 1241
99 Ga0157371_10004992 3300013102 Bacteria 11384
100 Ga0157371_10168440 3300013102 Bacteria 1565
101 Ga0157370_10043853 3300013104 Bacteria 4302
102 Ga0157369_10066623 3300013105 Bacteria 3873
103 Ga0157369_10298790 3300013105 Bacteria 1675
104 Ga0157374_10018863 3300013296 Bacteria 6097
105 Ga0157378_10832224 3300013297 Bacteria 950
106 Ga0163162_10527782 3300013306 Bacteria 1310
107 Ga0163162_10696227 3300013306 Bacteria 1138
108 Ga0157372_10019524 3300013307 Bacteria 7306
109 Ga0157372_10325269 3300013307 Bacteria 1790
110 Ga0157375_10027317 3300013308 Bacteria 5334
111 Ga0157375_10374067 3300013308 Bacteria 1591
112 Ga0157375_10483442 3300013308 Bacteria 1403
113 Ga0157375_10488919 3300013308 Bacteria 1395
114 Ga0163163_10402003 3300014325 Bacteria 1428
115 Ga0157377_10007201 3300014745 Bacteria 5357
116 Ga0157377_10223571 3300014745 Bacteria 1207
117 Ga0157377_10255901 3300014745 Bacteria 1137
118 Ga0157379_10086257 3300014968 Bacteria 2815
119 Ga0157379_10425461 3300014968 Bacteria 1223
120 Ga0206354_10628210 3300020081 Bacteria 4155
121 Ga0206353_10109164 3300020082 Bacteria 5678
122 Ga0224712_10001135 3300022467 Bacteria 5928
123 Ga0207656_10009433 3300025321 Bacteria 3626
124 Ga0207688_10000765 3300025901 Bacteria 15989
125 Ga0207645_10013111 3300025907 Bacteria 5599
126 Ga0207643_10000049 3300025908 Bacteria 78784
127 Ga0207643_10003461 3300025908 Bacteria 8498
128 Ga0207705_10020276 3300025909 Bacteria 4754
129 Ga0207705_10030882 3300025909 Bacteria 3824
130 Ga0207671_10044701 3300025914 Bacteria 3275
131 Ga0207671_10232323 3300025914 Bacteria 1447
132 Ga0207660_10093967 3300025917 Bacteria 2229
133 Ga0207657_10008837 3300025919 Bacteria 10190
134 Ga0207657_10011572 3300025919 Bacteria 8752
135 Ga0207657_10030133 3300025919 Bacteria 4930
136 Ga0207649_10027450 3300025920 Bacteria 3340
137 Ga0207652_10023917 3300025921 Bacteria 5066
138 Ga0207694_10084707 3300025924 Bacteria 2493
139 Ga0207694_10247342 3300025924 Bacteria 1458
140 Ga0207650_10006096 3300025925 Bacteria 8217
141 Ga0207659_10011241 3300025926 Bacteria 5651
142 Ga0207687_10032119 3300025927 Bacteria 3553
143 Ga0207687_10065533 3300025927 Bacteria 2580
144 Ga0207644_10024574 3300025931 Bacteria 4137
145 Ga0207690_10007571 3300025932 Bacteria 6446
146 Ga0207690_10034873 3300025932 Bacteria 3245
147 Ga0207706_10070908 3300025933 Bacteria 3065
148 Ga0207704_10203951 3300025938 Bacteria 1450
149 Ga0207691_10084809 3300025940 Bacteria 2843
150 Ga0207691_10098352 3300025940 Bacteria 2614
151 Ga0207691_10172010 3300025940 Bacteria 1897
152 Ga0207711_10000203 3300025941 Bacteria 63383
153 Ga0207689_10000355 3300025942 Bacteria 42965
154 Ga0207689_10035655 3300025942 Bacteria 4131
155 Ga0207661_10006328 3300025944 Bacteria 8374
156 Ga0207679_10016731 3300025945 Bacteria 4873
157 Ga0207667_10090541 3300025949 Bacteria 3161
158 Ga0207651_10045821 3300025960 Bacteria 2936
159 Ga0207712_10002270 3300025961 Bacteria 12476
160 Ga0207712_10284413 3300025961 Bacteria 1351
161 Ga0207712_10482964 3300025961 Bacteria 1056
162 Ga0207668_10029077 3300025972 Bacteria 3620
163 Ga0207640_10397231 3300025981 Bacteria 1122
164 Ga0207677_10047445 3300026023 Bacteria 2884
165 Ga0207677_10190786 3300026023 Bacteria 1621
166 Ga0207703_10405822 3300026035 Bacteria 1265
167 Ga0207639_10010005 3300026041 Bacteria 6555
168 Ga0207678_10000705 3300026067 Bacteria 30524
169 Ga0207678_10159320 3300026067 Bacteria 1928
170 Ga0207678_10262857 3300026067 Bacteria 1479
171 Ga0207702_10001520 3300026078 Bacteria 22948
172 Ga0207702_10083596 3300026078 Bacteria 2778
173 Ga0207641_10016724 3300026088 Bacteria 6007
174 Ga0207648_10057736 3300026089 Bacteria 3386
175 Ga0207676_10003132 3300026095 Bacteria 11807
176 Ga0207676_10111313 3300026095 Bacteria 2291
177 Ga0207674_10310296 3300026116 Bacteria 1527
178 Ga0207683_10000155 3300026121 Bacteria 57375
179 Ga0207683_10188470 3300026121 Bacteria 1872
180 Ga0207698_10017059 3300026142 Bacteria 4916
181 Ga0207698_10166006 3300026142 Bacteria 1937
182 Ga0207428_10003991 3300027907 Bacteria 14165
183 Ga0268266_10580296 3300028379 Bacteria 1076
184 Ga0268265_10000015 3300028380 Bacteria 322854
185 Ga0307515_10000315 3300028794 Bacteria 119286
186 Ga0307515_10079836 3300028794 Bacteria 4278
187 Ga0307515_10181883 3300028794 Bacteria 2048
188 Ga0307512_10038396 3300030522 Bacteria 4027
189 Ga0307509_10257077 3300031507 Bacteria 1525
190 Ga0307508_10008596 3300031616 Bacteria 9427
191 Ga0307516_10074861 3300031730 Bacteria 3240
192 Ga0307413_10194626 3300031824 Bacteria 1459
193 Ga0307410_10318098 3300031852 Bacteria 1234
194 Ga0307406_10284543 3300031901 Bacteria 1263
195 Ga0307409_100044585 3300031995 Bacteria 3342
196 Ga0307409_100050199 3300031995 Bacteria 3185
197 Ga0307409_100085727 3300031995 Bacteria 2561
198 Ga0307416_100086045 3300032002 Bacteria 2678
199 Ga0307415_100030396 3300032126 Bacteria 3467
200 Ga0307415_100251981 3300032126 Bacteria 1435
201 Ga0395900_0173740 3300037418 Bacteria 2192
202 Ga0395898_0055802 3300037466 Bacteria 3853
203 Ga0395901_0044808 3300038443 Bacteria 4588
204 Ga0439451_018651 3300042009 Bacteria 1400
205 Ga0450902_006026 3300042137 Bacteria 1850
206 Ga0439458_0008424 3300042157 Bacteria 2296
207 Ga0466972_0003237 3300044658 Bacteria 8073
208 Ga0466965_0000769 3300044683 Bacteria 12068
209 Ga0466965_0011086 3300044683 Bacteria 4216
210 Ga0466970_0007107 3300044765 Bacteria 5602
211 Ga0466957_0027412 3300044842 Bacteria 3386
212 Ga0466960_0004195 3300044901 Bacteria 5603
213 Ga0466959_0168050 3300045049 Bacteria 1539
214 Ga0466967_0069112 3300045976 Bacteria 3156
215 Ga0495649_0203391 3300046694 Bacteria 1028
216 Ga0495589_0058005 3300046794 Bacteria 1904
217 Ga0496102_0004742 3300048905 Bacteria 11512
218 Ga0496102_0025051 3300048905 Bacteria 5307
219 Ga0496102_0026544 3300048905 Bacteria 5168
220 Ga0496102_0160417 3300048905 Bacteria 2115
221 Ga0496103_0018471 3300048906 Bacteria 4182
222 Ga0496103_0138000 3300048906 Bacteria 1559
223 Ga0496104_0047487 3300048907 Bacteria 4046
224 Ga0496104_0192242 3300048907 Bacteria 1953
225 Ga0496105_0036330 3300048908 Bacteria 4058
226 Ga0496108_0026484 3300048911 Bacteria 4782
227 Ga0496108_0164290 3300048911 Bacteria 1919
228 Ga0496108_0197112 3300048911 Bacteria 1747
229 Ga0496109_0004796 3300048912 Bacteria 11290
230 Ga0496110_0011966 3300048913 Bacteria 7125
231 Ga0496110_0017590 3300048913 Bacteria 5978
232 Ga0496111_0047483 3300048914 Bacteria 3092
233 Ga0496114_0139906 3300048917 Bacteria 2095
234 Ga0496114_0252818 3300048917 Bacteria 1551
235 Ga0496116_0000371 3300048919 Bacteria 67456
236 Ga0496117_0024280 3300048920 Bacteria 4800
237 Ga0496117_0044184 3300048920 Bacteria 3230
238 Ga0496118_0002375 3300048921 Bacteria 25435
239 Ga0496118_0003721 3300048921 Bacteria 18881
240 Ga0496118_0101205 3300048921 Bacteria 1947
241 Ga0496118_0115687 3300048921 Bacteria 1765
242 Ga0496119_0000892 3300048922 Bacteria 39075
243 Ga0496119_0015267 3300048922 Bacteria 5932
244 Ga0496119_0031786 3300048922 Bacteria 3530
245 Ga0496120_0000882 3300048923 Bacteria 42252
246 Ga0496120_0002612 3300048923 Bacteria 17853
247 Ga0496122_0007542 3300048925 Bacteria 12055
248 Ga0496123_0001148 3300048926 Bacteria 39511
249 Ga0496124_0001764 3300048927 Bacteria 30135
250 Ga0496125_0000350 3300048928 Bacteria 87293
251 Ga0496126_0000075 3300048929 Bacteria 235121
252 Ga0501033_0039757 3300049570 Bacteria 3513
253 Ga0501047_0139090 3300049581 Bacteria 2307
254 Ga0501035_0196794 3300049822 Bacteria 1731
255 nmdc:mga08y16_119307_c1 3300050511 Bacteria 2746
256 nmdc:mga0n895_69040_c1 3300050512 Bacteria 3501
257 nmdc:mga08x19_247698_c1 3300050514 Bacteria 1230
258 nmdc:mga0a205_139484_c1 3300050515 Bacteria 2325
259 Ga0500651_0000170 3300053093 Bacteria 42448
260 Ga0500556_0000064 3300053104 Bacteria 109213
261 Ga0500556_0001107 3300053104 Bacteria 13405
262 Ga0500593_016310 3300053117 Bacteria 3217
263 Ga0500559_0001053 3300053136 Bacteria 16797
264 Ga0500616_0004063 3300053153 Bacteria 10644
265 Ga0500645_024875 3300053730 Bacteria 1828
266 Ga0500599_001791 3300053736 Bacteria 2519
267 2508670335 2508501039 Bacteria 9978592
268 2517762821 2517572101 Bacteria 6884336
269 2579856983 2579778521 Bacteria 7624758
270 2587861691 2585428094 Bacteria 3604039
271 2619858604 2619618881 Bacteria 7521104
272 2620352828 2619619003 Bacteria 7619552
273 2626638156 2626541554 Bacteria 7741902
274 2643769175 2643221549 Bacteria 4042819
275 2643847733 2643221566 Bacteria 3460379
276 2689958815 2687453737 Bacteria 11203906
277 2738692536 2738541272 Bacteria 6848551
278 2739323624 2738543027 Bacteria 6409078
279 2809226200 2808606447 Bacteria 3572005
280 2821268943 2821268502 Bacteria 3750023
281 2852632458 2852632344 Bacteria 3463163
282 2891969462 2891968417 Bacteria 5821697
283 2977237291 2977236895 Bacteria 3569373
284 2984544922 2984542743 Bacteria 3569378
285 8002791619 8002784119 Bacteria 9788632
286 8054473193 8054472261 Bacteria 7464355
287 8056039929 8056037122 Bacteria 3854319
288 JGI25406J46586_10001099
289 Ga0070658_10157213
290 Ga0070658_10345686
291 Ga0070670_100029545
292 Ga0068869_100005134
293 Ga0068869_100041920
294 Ga0070680_100012976
295 Ga0070682_100007230
296 Ga0068868_100081050
297 Ga0070660_100020233
298 Ga0070660_100049260
299 Ga0070691_10007470
300 Ga0070687_100050877
301 Ga0070661_100020423
302 Ga0070661_100042586
303 Ga0070692_10002768
304 Ga0070692_10206026
305 Ga0070668_100041782
306 Ga0070668_100072121
307 Ga0070675_100017195
308 Ga0070675_100072662
309 Ga0070675_100137957
310 Ga0070671_100005657
311 Ga0070671_100091388
312 Ga0070673_100173030
313 Ga0070659_100001097
314 Ga0070701_10019868
315 Ga0070705_100070026
316 Ga0070700_100027782
317 Ga0070663_100002917
318 Ga0070663_100129782
319 Ga0070663_100205797
320 Ga0070678_100011448
321 Ga0070681_10018792
322 Ga0070679_100051719
323 Ga0070672_100147470
324 Ga0070672_100211568
325 Ga0070672_100538772
326 Ga0070693_100000347
327 Ga0070665_100542954
328 Ga0070665_100580337
329 Ga0070665_100681817
330 Ga0068855_100125758
331 Ga0068855_100258721
332 Ga0070664_100029567
333 Ga0070664_100042059
334 Ga0068857_100245262
335 Ga0068854_100010009
336 Ga0068856_100019177
337 Ga0068856_100189340
338 Ga0070702_100002009
339 Ga0068852_100020662
340 Ga0068852_100175666
341 Ga0068852_100271626
342 Ga0068859_100002957
343 Ga0068859_100041923
344 Ga0068859_100367504
345 Ga0068864_100115588
346 Ga0068864_100205007
347 Ga0068851_10020568
348 Ga0068870_10001611
349 Ga0068863_100013760
350 Ga0068858_100064091
351 Ga0068858_100113678
352 Ga0068862_100000237
353 Ga0081455_10108436
354 Ga0081539_10000352
355 Ga0081539_10022554
356 Ga0081539_10039856
357 Ga0075432_10044424
358 Ga0097621_100212531
359 Ga0068871_100042170
360 Ga0075434_100006513
361 Ga0068865_100015526
362 Ga0075436_100001698
363 Ga0097620_100002957
364 Ga0097620_100041922
365 Ga0097620_100367526
366 Ga0075435_100040799
367 Ga0105244_10071335
368 Ga0105240_10182117
369 Ga0111539_10076564
370 Ga0105245_10010417
371 Ga0105245_10023473
372 Ga0105245_10149330
373 Ga0105243_10028698
374 Ga0105241_10004243
375 Ga0105248_10000034
376 Ga0105237_10044786
377 Ga0105237_10487506
378 Ga0105238_10040622
379 Ga0105249_10007146
380 Ga0105249_10791683
381 Ga0105239_10041277
382 Ga0105239_10133440
383 Ga0105239_10359767
384 Ga0105246_10009891
385 Ga0105246_10331047
386 Ga0157371_10004992
387 Ga0157371_10168440
388 Ga0157370_10043853
389 Ga0157369_10066623
390 Ga0157369_10298790
391 Ga0157374_10018863
392 Ga0157378_10832224
393 Ga0163162_10527782
394 Ga0163162_10696227
395 Ga0157372_10019524
396 Ga0157372_10325269
397 Ga0157375_10027317
398 Ga0157375_10374067
399 Ga0157375_10483442
400 Ga0157375_10488919
401 Ga0163163_10402003
402 Ga0157377_10007201
403 Ga0157377_10223571
404 Ga0157377_10255901
405 Ga0157379_10086257
406 Ga0157379_10425461
407 Ga0206354_10628210
408 Ga0206353_10109164
409 Ga0224712_10001135
410 Ga0207656_10009433
411 Ga0207688_10000765
412 Ga0207645_10013111
413 Ga0207643_10000049
414 Ga0207643_10003461
415 Ga0207705_10020276
416 Ga0207705_10030882
417 Ga0207671_10044701
418 Ga0207671_10232323
419 Ga0207660_10093967
420 Ga0207657_10008837
421 Ga0207657_10011572
422 Ga0207657_10030133
423 Ga0207649_10027450
424 Ga0207652_10023917
425 Ga0207694_10084707
426 Ga0207694_10247342
427 Ga0207650_10006096
428 Ga0207659_10011241
429 Ga0207687_10032119
430 Ga0207687_10065533
431 Ga0207644_10024574
432 Ga0207690_10007571
433 Ga0207690_10034873
434 Ga0207706_10070908
435 Ga0207704_10203951
436 Ga0207691_10084809
437 Ga0207691_10098352
438 Ga0207691_10172010
439 Ga0207711_10000203
440 Ga0207689_10000355
441 Ga0207689_10035655
442 Ga0207661_10006328
443 Ga0207679_10016731
444 Ga0207667_10090541
445 Ga0207651_10045821
446 Ga0207712_10002270
447 Ga0207712_10284413
448 Ga0207712_10482964
449 Ga0207668_10029077
450 Ga0207640_10397231
451 Ga0207677_10047445
452 Ga0207677_10190786
453 Ga0207703_10405822
454 Ga0207639_10010005
455 Ga0207678_10000705
456 Ga0207678_10159320
457 Ga0207678_10262857
458 Ga0207702_10001520
459 Ga0207702_10083596
460 Ga0207641_10016724
461 Ga0207648_10057736
462 Ga0207676_10003132
463 Ga0207676_10111313
464 Ga0207674_10310296
465 Ga0207683_10000155
466 Ga0207683_10188470
467 Ga0207698_10017059
468 Ga0207698_10166006
469 Ga0207428_10003991
470 Ga0268266_10580296
471 Ga0268265_10000015
472 Ga0307515_10000315
473 Ga0307515_10079836
474 Ga0307515_10181883
475 Ga0307512_10038396
476 Ga0307509_10257077
477 Ga0307508_10008596
478 Ga0307516_10074861
479 Ga0307413_10194626
480 Ga0307410_10318098
481 Ga0307406_10284543
482 Ga0307409_100044585
483 Ga0307409_100050199
484 Ga0307409_100085727
485 Ga0307416_100086045
486 Ga0307415_100030396
487 Ga0307415_100251981
488 Ga0395900_0173740
489 Ga0395898_0055802
490 Ga0395901_0044808
491 Ga0439451_018651
492 Ga0450902_006026
493 Ga0439458_0008424
494 Ga0466972_0003237
495 Ga0466965_0000769
496 Ga0466965_0011086
497 Ga0466970_0007107
498 Ga0466957_0027412
499 Ga0466960_0004195
500 Ga0466959_0168050
501 Ga0466967_0069112
502 Ga0495649_0203391
503 Ga0495589_0058005
504 Ga0496102_0004742
505 Ga0496102_0025051
506 Ga0496102_0026544
507 Ga0496102_0160417
508 Ga0496103_0018471
509 Ga0496103_0138000
510 Ga0496104_0047487
511 Ga0496104_0192242
512 Ga0496105_0036330
513 Ga0496108_0026484
514 Ga0496108_0164290
515 Ga0496108_0197112
516 Ga0496109_0004796
517 Ga0496110_0011966
518 Ga0496110_0017590
519 Ga0496111_0047483
520 Ga0496114_0139906
521 Ga0496114_0252818
522 Ga0496116_0000371
523 Ga0496117_0024280
524 Ga0496117_0044184
525 Ga0496118_0002375
526 Ga0496118_0003721
527 Ga0496118_0101205
528 Ga0496118_0115687
529 Ga0496119_0000892
530 Ga0496119_0015267
531 Ga0496119_0031786
532 Ga0496120_0000882
533 Ga0496120_0002612
534 Ga0496122_0007542
535 Ga0496123_0001148
536 Ga0496124_0001764
537 Ga0496125_0000350
538 Ga0496126_0000075
539 Ga0501033_0039757
540 Ga0501047_0139090
541 Ga0501035_0196794
542 nmdc:mga08y16_119307_c1
543 nmdc:mga0n895_69040_c1
544 nmdc:mga08x19_247698_c1
545 nmdc:mga0a205_139484_c1
546 Ga0500651_0000170
547 Ga0500556_0000064
548 Ga0500556_0001107
549 Ga0500593_016310
550 Ga0500559_0001053
551 Ga0500616_0004063
552 Ga0500645_024875
553 Ga0500599_001791
554 2508670335
555 2517762821
556 2579856983
557 2587861691
558 2619858604
559 2620352828
560 2626638156
561 2643769175
562 2643847733
563 2689958815
564 2738692536
565 2739323624
566 2809226200
567 2821268943
568 2852632458
569 2891969462
570 2977237291
571 2984544922
572 8002791619
573 8054473193
574 8056039929

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

78

220

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3puy-assembly1.cif.gz_B crystal structure of an outward-facing mbp-maltose transporter complex bound to amp-pnp after crystal soaking of the pretranslocation state 0.941 16 235
3rlf-assembly1.cif.gz_B crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to mgamppnp 0.9393 16 235
3pux-assembly1.cif.gz_B crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-bef3 0.9355 16 235
6cvl-assembly1.cif.gz_C crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein 0.9339 15 236
2r6g-assembly1.cif.gz_A the crystal structure of the e. coli maltose transporter 0.9316 16 235
ID Description Score Start End Superfamily
af_Q9VRG3_1356_1574_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9363 14 222 3.40.50.300
af_Q2G1I6_1_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9343 16 263 3.40.50.300
af_Q4DWA3_1535_1779_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9165 12 235 3.40.50.300
af_P0A9U1_321_563_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9142 14 235 3.40.50.300
af_Q9VVK6_1124_1370_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9123 14 236 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A117M6M0-F1-model_v4 ABC-type transport system, ATPase component 0.942 14 235 GO:0005524
GO:0016887
AF-K1YG27-F1-model_v4 ABC transporter domain-containing protein 0.9378 14 235 GO:0005524
GO:0016887
AF-A0A7C2WNC3-F1-model_v4 ATP-binding cassette domain-containing protein 0.9372 14 236 GO:0005524
GO:0016887
AF-A0A1T4Y160-F1-model_v4 Tungstate transport system ATP-binding protein 0.9368 16 230 GO:0005524
GO:0016887
AF-A0A510HJD7-F1-model_v4 Putative ABC transporter ATP-binding protein YhaQ 0.9355 16 236 GO:0005524
GO:0016887

Map