F388227

General Info

Members Datasets Scaffolds Average Seq Length
287 176 229 280

Family's Representative Sequence

Representative Sequence 3300048922|Ga0496119_0001056|Ga0496119_0001056_20735_21718
Length 314
Sequence METSSLFALRIMGGLKAALLLLAVSLASSSKVWFVTGSNRGNGLAITRAALDAGYRVVATTRQPAQARAALGEHGDRLLIVSLDVTRPDQAEAAVAAAKERFGRIDVLVNNAGYGQLGWFENTSDALIRRQFETNLFGAMNVTRAVLPVMRQQRSGHVFTVSSVAGLVSVSGSSVYSASKFAVEGWMEGLAAELKPLGIASTIVEPGFFRTDFLDASSVSYGDRDIAEYSEASAKFRAWHDDMNHKQIGDPAKLGAAIVKISAMSSPPLRFAAGSDAYGLVIKKAQELREGAEQMRALSISTDGNWPPVGDITK

Samples

Sample ID Description Type Environment
1 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
2 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
3 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
4 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
5 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
6 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
7 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
8 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
9 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
10 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
11 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
12 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
13 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
14 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
15 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
16 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
17 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
18 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
19 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
20 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
21 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
22 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
23 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
24 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
25 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
26 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
27 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
28 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
29 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
30 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
31 2862574272 Streptomyces sp. AcE210 Isolate Nodule
32 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
33 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
34 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
35 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
36 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
37 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
38 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
39 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
40 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
41 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
42 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
43 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
51 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
52 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
53 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
54 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
64 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
65 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
66 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
70 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
71 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
72 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
73 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
74 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
75 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
76 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
77 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
78 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
79 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
80 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
81 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
82 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
83 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
84 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
92 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
93 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
94 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
95 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
101 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
102 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
103 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
104 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
105 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
106 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
107 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
121 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
124 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
125 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
126 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
127 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
128 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
129 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
130 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
131 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
132 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
135 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
136 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
139 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
140 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
141 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
142 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
143 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
144 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
147 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
148 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
149 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
150 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
151 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
152 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
155 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
156 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
157 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
158 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
159 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
160 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
161 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
162 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
163 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
164 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
165 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
166 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
167 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
168 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
169 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
170 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
171 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
172 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
173 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
174 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
175 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
176 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.62
Metatranscriptomes 0
Isolates 16.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.32
Nodule 12.2
Rhizoplane 1.39
Rhizosphere 65.85
Stem 0
Stem Tuber 0
Unclassified 13.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10093344 3300003322 Bacteria 18144
2 Ga0065714_10003212 3300005288 Bacteria 9606
3 Ga0070680_100160592 3300005336 Bacteria 1889
4 Ga0070711_100001355 3300005439 Bacteria 13374
5 Ga0068867_100069152 3300005459 Bacteria 2636
6 Ga0070704_100386897 3300005549 Bacteria 1190
7 Ga0075364_10432941 3300006051 Bacteria 898
8 Ga0105249_10197306 3300009553 Bacteria 1968
9 Ga0207712_10287997 3300025961 Bacteria 1343
10 Ga0307517_10011484 3300028786 Bacteria 12270
11 Ga0307517_10016925 3300028786 Bacteria 9547
12 Ga0307515_10002955 3300028794 Bacteria 36045
13 Ga0307515_10073209 3300028794 Bacteria 4609
14 Ga0307515_10196424 3300028794 Bacteria 1908
15 Ga0307511_10000481 3300030521 Bacteria 43338
16 Ga0307511_10058458 3300030521 Bacteria 2980
17 Ga0316183_1086246 3300030742 Bacteria 40321
18 Ga0316181_1058577 3300030744 Bacteria 14287
19 Ga0316182_1368332 3300030745 Unclassified 2317
20 Ga0307509_10001655 3300031507 Bacteria 37324
21 Ga0307509_10007108 3300031507 Bacteria 14762
22 Ga0307509_10072163 3300031507 Bacteria 3598
23 Ga0307408_100122428 3300031548 Bacteria 2017
24 Ga0307508_10225054 3300031616 Bacteria 1475
25 Ga0307514_10186249 3300031649 Bacteria 1330
26 Ga0307405_10085792 3300031731 Bacteria 2071
27 Ga0307410_10214191 3300031852 Bacteria 1478
28 Ga0307412_10425133 3300031911 Bacteria 1088
29 Ga0307409_100359868 3300031995 Bacteria 1376
30 Ga0307409_100369236 3300031995 Bacteria 1360
31 Ga0307416_100348166 3300032002 Bacteria 1498
32 Ga0307507_10094752 3300033179 Bacteria 2536
33 Ga0307510_10054591 3300033180 Bacteria 4182
34 Ga0307510_10056510 3300033180 Bacteria 4085
35 Ga0307510_10139675 3300033180 Bacteria 2070
36 Ga0373951_0000094 3300035091 Bacteria 34315
37 Ga0373927_0003748 3300035695 Bacteria 10795
38 Ga0373937_0091626 3300036401 Bacteria 2817
39 Ga0395905_0008095 3300037471 Bacteria 10383
40 Ga0439436_0067473 3300041404 Bacteria 998
41 Ga0439438_001367 3300041405 Bacteria 10771
42 Ga0451793_1494883 3300041452 Bacteria 1132
43 Ga0451793_1775374 3300041452 Bacteria 1170
44 Ga0451833_0007252 3300041491 Bacteria 1296
45 Ga0451835_0021271 3300041492 Bacteria 1098
46 Ga0451837_0785060 3300041494 Bacteria 1315
47 Ga0451839_0257305 3300041496 Bacteria 2312
48 Ga0451841_0376201 3300041498 Bacteria 1346
49 Ga0451845_0959929 3300041501 Bacteria 3439
50 Ga0451847_0757026 3300041503 Bacteria 6195
51 Ga0451851_0193183 3300041507 Bacteria 2738
52 Ga0451843_0153273 3300041509 Bacteria 798
53 Ga0451853_2473934 3300041512 Bacteria 2959
54 Ga0451853_3917333 3300041512 Bacteria 2020
55 Ga0439445_0010017 3300042004 Bacteria 2238
56 Ga0439446_0128854 3300042156 Bacteria 819
57 Ga0495617_018023 3300046452 Bacteria 2387
58 Ga0495592_0025962 3300046454 Bacteria 4444
59 Ga0495592_0048305 3300046454 Bacteria 3166
60 Ga0495592_0153557 3300046454 Bacteria 1590
61 Ga0495592_0197554 3300046454 Bacteria 1359
62 Ga0495603_0001016 3300046455 Bacteria 16176
63 Ga0495603_0004014 3300046455 Bacteria 8761
64 Ga0495603_0004683 3300046455 Bacteria 8170
65 Ga0495603_0005727 3300046455 Bacteria 7431
66 Ga0495629_0000252 3300046459 Bacteria 46609
67 Ga0495629_0002658 3300046459 Bacteria 13699
68 Ga0495629_0164369 3300046459 Bacteria 1541
69 Ga0495638_0000001 3300046460 Bacteria 1114121
70 Ga0495638_0014233 3300046460 Bacteria 5384
71 Ga0495638_0058203 3300046460 Bacteria 2396
72 Ga0495651_0000202 3300046462 Bacteria 45262
73 Ga0495651_0002222 3300046462 Bacteria 14991
74 Ga0495651_0007039 3300046462 Bacteria 8601
75 Ga0495651_0007427 3300046462 Bacteria 8380
76 Ga0495653_0017053 3300046463 Bacteria 5908
77 Ga0495662_0001795 3300046476 Bacteria 10744
78 Ga0495664_0002146 3300046477 Bacteria 10552
79 Ga0495664_0003686 3300046477 Bacteria 8351
80 Ga0495585_0007625 3300046492 Bacteria 6613
81 Ga0495594_0000146 3300046499 Bacteria 33823
82 Ga0495594_0007920 3300046499 Bacteria 5462
83 Ga0495594_0297736 3300046499 Bacteria 919
84 Ga0495583_0022489 3300046506 Bacteria 3215
85 Ga0495583_0043418 3300046506 Bacteria 2093
86 Ga0495583_0051834 3300046506 Bacteria 1869
87 Ga0495608_0104358 3300046511 Bacteria 1825
88 Ga0495620_0008691 3300046515 Bacteria 5436
89 Ga0495620_0024516 3300046515 Bacteria 2868
90 Ga0495620_0086897 3300046515 Bacteria 1258
91 Ga0495628_0017547 3300046516 Bacteria 5954
92 Ga0495628_0020378 3300046516 Bacteria 5470
93 Ga0495628_0027023 3300046516 Bacteria 4672
94 Ga0495628_0221184 3300046516 Bacteria 1422
95 Ga0495630_0118545 3300046517 Bacteria 2007
96 Ga0495637_0069949 3300046520 Bacteria 1419
97 Ga0495643_0001562 3300046522 Bacteria 20406
98 Ga0495648_0039443 3300046524 Bacteria 3005
99 Ga0495648_0043024 3300046524 Bacteria 2836
100 Ga0495666_0001499 3300046526 Bacteria 11413
101 Ga0495652_0006075 3300046529 Bacteria 11290
102 Ga0495652_0015036 3300046529 Bacteria 6933
103 Ga0495652_0039319 3300046529 Bacteria 4090
104 Ga0495652_0061530 3300046529 Bacteria 3168
105 Ga0495665_0098389 3300046531 Bacteria 1536
106 Ga0495640_0029148 3300046533 Bacteria 3966
107 Ga0495586_0026021 3300046535 Bacteria 3130
108 Ga0495586_0106497 3300046535 Bacteria 1559
109 Ga0495587_0003618 3300046536 Bacteria 10285
110 Ga0495587_0003751 3300046536 Bacteria 10077
111 Ga0495587_0006471 3300046536 Bacteria 7631
112 Ga0495587_0012492 3300046536 Bacteria 5341
113 Ga0495645_0014177 3300046543 Bacteria 5651
114 Ga0495645_0024386 3300046543 Bacteria 4388
115 Ga0495622_0004175 3300046557 Bacteria 6740
116 Ga0495622_0010212 3300046557 Bacteria 4339
117 Ga0495667_0006820 3300046559 Bacteria 7753
118 Ga0495667_0035758 3300046559 Bacteria 3318
119 Ga0495668_0060715 3300046616 Bacteria 2085
120 Ga0495668_0077213 3300046616 Bacteria 1828
121 Ga0495634_0000126 3300046642 Bacteria 65545
122 Ga0495634_0000850 3300046642 Bacteria 29410
123 Ga0495634_0113825 3300046642 Bacteria 1737
124 Ga0495611_0000607 3300046648 Bacteria 20677
125 Ga0495611_0003834 3300046648 Bacteria 6557
126 Ga0495611_0104954 3300046648 Bacteria 1314
127 Ga0495625_0006624 3300046660 Bacteria 10283
128 Ga0495625_0043958 3300046660 Bacteria 3236
129 Ga0495635_0002172 3300046663 Bacteria 13332
130 Ga0495635_0006000 3300046663 Bacteria 8476
131 Ga0495635_0122279 3300046663 Bacteria 1775
132 Ga0495635_0136958 3300046663 Bacteria 1668
133 Ga0495588_0004680 3300046674 Bacteria 6043
134 Ga0495657_0018702 3300046675 Bacteria 5007
135 Ga0495657_0020016 3300046675 Bacteria 4818
136 Ga0495657_0020645 3300046675 Bacteria 4735
137 Ga0495657_0042181 3300046675 Bacteria 3117
138 Ga0495599_0016872 3300046678 Bacteria 4535
139 Ga0495623_0027165 3300046679 Bacteria 3680
140 Ga0495623_0190288 3300046679 Bacteria 1186
141 Ga0495646_0004802 3300046680 Bacteria 8534
142 Ga0495646_0004903 3300046680 Bacteria 8453
143 Ga0495646_0021295 3300046680 Bacteria 4098
144 Ga0495613_0002879 3300046689 Bacteria 12882
145 Ga0495613_0004934 3300046689 Bacteria 10025
146 Ga0495613_0022277 3300046689 Bacteria 4721
147 Ga0495613_0035942 3300046689 Bacteria 3674
148 Ga0495613_0145494 3300046689 Bacteria 1691
149 Ga0495613_0203745 3300046689 Bacteria 1394
150 Ga0495624_0083780 3300046690 Bacteria 1971
151 Ga0495624_0086835 3300046690 Bacteria 1932
152 Ga0495670_0016335 3300046691 Bacteria 3648
153 Ga0495671_0021781 3300046692 Bacteria 3363
154 Ga0495649_0072983 3300046694 Bacteria 1839
155 Ga0495589_0089008 3300046794 Bacteria 1499
156 Ga0495600_0000692 3300046809 Bacteria 17646
157 Ga0495600_0001549 3300046809 Bacteria 12783
158 Ga0495600_0001980 3300046809 Bacteria 11510
159 Ga0495600_0016454 3300046809 Bacteria 4694
160 Ga0495600_0065226 3300046809 Bacteria 2380
161 Ga0495660_0004278 3300046810 Bacteria 8658
162 Ga0495660_0031557 3300046810 Bacteria 2979
163 Ga0495581_0051692 3300047315 Bacteria 2373
164 Ga0495604_0000268 3300047317 Bacteria 46321
165 Ga0495604_0000371 3300047317 Bacteria 40473
166 Ga0495604_0000590 3300047317 Bacteria 31463
167 Ga0495604_0001464 3300047317 Bacteria 19421
168 Ga0495604_0052404 3300047317 Bacteria 3160
169 Ga0495636_0003052 3300047318 Bacteria 6491
170 Ga0495636_0075648 3300047318 Bacteria 1443
171 Ga0495674_0003867 3300047319 Bacteria 14549
172 Ga0495676_0003232 3300047321 Bacteria 14732
173 Ga0495676_0008319 3300047321 Bacteria 9513
174 Ga0495676_0009530 3300047321 Bacteria 8840
175 Ga0495676_0011510 3300047321 Bacteria 7979
176 Ga0495676_0023011 3300047321 Bacteria 5414
177 Ga0495676_0057166 3300047321 Bacteria 3079
178 Ga0495680_0008304 3300047322 Bacteria 9454
179 Ga0495683_0001134 3300047323 Bacteria 18352
180 Ga0495683_0177722 3300047323 Bacteria 974
181 Ga0495687_006503 3300047443 Bacteria 7144
182 Ga0495687_008475 3300047443 Bacteria 5882
183 Ga0495687_010426 3300047443 Bacteria 5097
184 Ga0495687_015572 3300047443 Bacteria 3861
185 Ga0495687_062066 3300047443 Bacteria 1535
186 Ga0495675_0015816 3300047444 Bacteria 4772
187 Ga0495675_0089473 3300047444 Bacteria 1932
188 Ga0495675_0130530 3300047444 Bacteria 1562
189 Ga0495679_016834 3300047446 Bacteria 2634
190 Ga0495681_0011476 3300047470 Bacteria 5274
191 Ga0495684_0015448 3300047471 Bacteria 5875
192 Ga0495684_0141363 3300047471 Bacteria 1804
193 Ga0495593_0004881 3300047673 Bacteria 7959
194 Ga0495593_0051361 3300047673 Bacteria 2182
195 Ga0495593_0090088 3300047673 Bacteria 1580
196 Ga0495602_0061355 3300048088 Bacteria 3270
197 Ga0495614_0001782 3300048089 Bacteria 9409
198 Ga0495614_0007926 3300048089 Bacteria 4720
199 Ga0495614_0015134 3300048089 Bacteria 3366
200 Ga0495614_0039419 3300048089 Bacteria 2027
201 Ga0496104_0059281 3300048907 Bacteria 3624
202 Ga0496105_0022002 3300048908 Bacteria 5162
203 Ga0496119_0001056 3300048922 Bacteria 35138
204 Ga0496120_0000170 3300048923 Bacteria 110378
205 Ga0501221_075094 3300049704 Bacteria 804
206 Ga0501241_011467 3300049758 Bacteria 1609
207 nmdc:mga00v17_10873_c1 3300050491 Bacteria 4986
208 nmdc:mga00v17_195280_c1 3300050491 Bacteria 1308
209 nmdc:mga0yw44_123274_c1 3300050492 Bacteria 1671
210 nmdc:mga06z11_9260_c1 3300050494 Bacteria 4143
211 Ga0495601_0009310 3300053077 Bacteria 5808
212 Ga0495601_0028152 3300053077 Bacteria 3479
213 Ga0495612_0001284 3300053078 Bacteria 10356
214 Ga0500610_0089355 3300053079 Bacteria 1601
215 Ga0500578_0181827 3300053086 Bacteria 1295
216 Ga0500644_0005432 3300053088 Bacteria 3219
217 Ga0500644_0022865 3300053088 Bacteria 1891
218 Ga0500644_0063067 3300053088 Bacteria 1312
219 Ga0500641_0173127 3300053096 Bacteria 929
220 Ga0500652_009487 3300053131 Bacteria 3293
221 Ga0500658_0142484 3300053134 Bacteria 1076
222 Ga0500561_0002589 3300053137 Bacteria 3065
223 Ga0500573_0000086 3300053140 Bacteria 42361
224 Ga0500573_0066216 3300053140 Bacteria 2065
225 Ga0500600_0184390 3300053149 Bacteria 1000
226 Ga0500616_0000363 3300053153 Bacteria 64277
227 Ga0500627_0013607 3300053158 Bacteria 3092
228 Ga0500634_0144094 3300053161 Bacteria 1123
229 Ga0500636_0048615 3300053177 Bacteria 2497

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049704 Ga0501221_075094 Ga0501221_075094_25_756 233
2 3300041404 Ga0439436_0067473 Ga0439436_0067473_35_772 237
3 3300042156 Ga0439446_0128854 Ga0439446_0128854_25_780 237
4 iso_pu_bacteria 2513237084 2513572197 240
5 3300053088 Ga0500644_0005432 Ga0500644_0005432_1111_1839 241
6 3300031649 Ga0307514_10186249 Ga0307514_101862493 246
7 3300047470 Ga0495681_0011476 Ga0495681_0011476_3143_3901 246
8 3300041509 Ga0451843_0153273 Ga0451843_0153273_27_782 247
9 3300031911 Ga0307412_10425133 Ga0307412_104251331 256
10 iso_pu_bacteria 2854916844 2854920454 260
11 3300046499 Ga0495594_0297736 Ga0495594_0297736_79_894 262
12 3300053096 Ga0500641_0173127 Ga0500641_0173127_40_837 262
13 iso_pu_bacteria 2522572158 2523107784 266
14 iso_pu_bacteria 2924710171 2924710554 266
15 3300037471 Ga0395905_0008095 Ga0395905_0008095_7986_8801 270
16 3300041452 Ga0451793_1775374 Ga0451793_1775374_22_852 270
17 3300046524 Ga0495648_0043024 Ga0495648_0043024_1694_2524 270
18 3300046616 Ga0495668_0077213 Ga0495668_0077213_522_1340 270
19 3300049758 Ga0501241_011467 Ga0501241_011467_261_1076 270
20 3300050491 nmdc:mga00v17_10873_c1 nmdc:mga00v17_10873_c1_1033_1890 270
21 3300053140 Ga0500573_0000086 Ga0500573_0000086_40462_41277 270
22 iso_pu_bacteria 2510065019 2510133150 271
23 iso_pu_bacteria 2510461076 2510894519 271
24 iso_pu_bacteria 2513237093 2513634339 271
25 iso_pu_bacteria 2513237162 2514022776 271
26 iso_pu_bacteria 2515154113 2515635581 271
27 iso_pu_bacteria 2515154114 2515646219 271
28 iso_pu_bacteria 2515154116 2515657258 271
29 iso_pu_bacteria 2516653077 2517035846 271
30 iso_pu_bacteria 2517093000 2517094992 271
31 iso_pu_bacteria 2582581314 2585317152 271
32 iso_pu_bacteria 2616644814 2616700925 271
33 iso_pu_bacteria 2724679232 2725951215 271
34 iso_pu_bacteria 2751185782 2753267034 271
35 iso_pu_bacteria 2808606359 2808841073 271
36 iso_pu_bacteria 2811994879 2812354872 271
37 iso_pu_bacteria 2838680041 2838686436 271
38 iso_pu_bacteria 2838694306 2838701018 271
39 iso_pu_bacteria 2838707686 2838714147 271
40 iso_pu_bacteria 2842077413 2842083800 271
41 iso_pu_bacteria 2842118031 2842124836 271
42 iso_pu_bacteria 2842237096 2842243559 271
43 iso_pu_bacteria 2842291075 2842297948 271
44 iso_pu_bacteria 2842370503 2842377326 271
45 iso_pu_bacteria 2842377471 2842384420 271
46 iso_pu_bacteria 2842384541 2842391439 271
47 iso_pu_bacteria 2862382967 2862391080 271
48 iso_pu_bacteria 2862574272 2862581319 271
49 iso_pu_bacteria 2935894831 2935901276 271
50 iso_pu_bacteria 2936367885 2936372896 271
51 iso_pu_bacteria 2936375103 2936376768 271
52 iso_pu_bacteria 2946064051 2946064279 271
53 iso_pu_bacteria 2954380949 2954382937 271
54 iso_pu_bacteria 2954380949 2954387382 271
55 iso_pu_bacteria 2977898635 2977903793 271
56 iso_pu_bacteria 639633055 639648379 271
57 iso_pu_bacteria 8005376324 8005379023 271
58 iso_pu_bacteria 8005556819 8005557881 271
59 iso_pu_bacteria 8005563573 8005569054 271
60 iso_pu_bacteria 8008558824 8008564463 271
61 iso_pu_bacteria 8018163183 8018166967 271
62 iso_pu_bacteria 8024479707 8024482129 271
63 iso_pu_bacteria 8057874678 8057875235 271
64 3300046459 Ga0495629_0000252 Ga0495629_0000252_33586_34422 272
65 3300046462 Ga0495651_0007039 Ga0495651_0007039_2120_2956 272
66 3300046477 Ga0495664_0002146 Ga0495664_0002146_5571_6407 272
67 3300046516 Ga0495628_0221184 Ga0495628_0221184_429_1265 272
68 3300046642 Ga0495634_0000126 Ga0495634_0000126_30421_31257 272
69 3300046663 Ga0495635_0002172 Ga0495635_0002172_3484_4320 272
70 3300046680 Ga0495646_0004903 Ga0495646_0004903_2957_3793 272
71 3300046809 Ga0495600_0001980 Ga0495600_0001980_7079_7915 272
72 3300047317 Ga0495604_0000268 Ga0495604_0000268_11168_12004 272
73 3300047321 Ga0495676_0008319 Ga0495676_0008319_6158_6994 272
74 3300047673 Ga0495593_0090088 Ga0495593_0090088_421_1257 272
75 3300048089 Ga0495614_0001782 Ga0495614_0001782_851_1687 272
76 3300028786 Ga0307517_10016925 Ga0307517_100169259 274
77 3300003322 rootL2_10093344 rootL2_100933449 275
78 3300005288 Ga0065714_10003212 Ga0065714_100032129 275
79 3300005336 Ga0070680_100160592 Ga0070680_1001605922 275
80 3300005439 Ga0070711_100001355 Ga0070711_1000013557 275
81 3300005459 Ga0068867_100069152 Ga0068867_1000691523 275
82 3300005549 Ga0070704_100386897 Ga0070704_1003868972 275
83 3300006051 Ga0075364_10432941 Ga0075364_104329411 275
84 3300009553 Ga0105249_10197306 Ga0105249_101973062 275
85 3300025961 Ga0207712_10287997 Ga0207712_102879971 275
86 3300028786 Ga0307517_10011484 Ga0307517_100114848 275
87 3300028794 Ga0307515_10002955 Ga0307515_1000295521 275
88 3300028794 Ga0307515_10073209 Ga0307515_100732094 275
89 3300028794 Ga0307515_10196424 Ga0307515_101964242 275
90 3300030521 Ga0307511_10000481 Ga0307511_100004816 275
91 3300030521 Ga0307511_10058458 Ga0307511_100584585 275
92 3300030742 Ga0316183_1086246 Ga0316183_108624623 275
93 3300030744 Ga0316181_1058577 Ga0316181_10585771 275
94 3300030745 Ga0316182_1368332 Ga0316182_13683323 275
95 3300031507 Ga0307509_10001655 Ga0307509_1000165535 275
96 3300031507 Ga0307509_10007108 Ga0307509_100071084 275
97 3300031507 Ga0307509_10072163 Ga0307509_100721634 275
98 3300031548 Ga0307408_100122428 Ga0307408_1001224283 275
99 3300031616 Ga0307508_10225054 Ga0307508_102250541 275
100 3300031731 Ga0307405_10085792 Ga0307405_100857923 275
101 3300031852 Ga0307410_10214191 Ga0307410_102141912 275
102 3300031995 Ga0307409_100359868 Ga0307409_1003598682 275
103 3300031995 Ga0307409_100369236 Ga0307409_1003692362 275
104 3300032002 Ga0307416_100348166 Ga0307416_1003481662 275
105 3300033179 Ga0307507_10094752 Ga0307507_100947522 275
106 3300033180 Ga0307510_10054591 Ga0307510_100545913 275
107 3300033180 Ga0307510_10056510 Ga0307510_100565102 275
108 3300033180 Ga0307510_10139675 Ga0307510_101396752 275
109 3300035091 Ga0373951_0000094 Ga0373951_0000094_12214_13053 275
110 3300035695 Ga0373927_0003748 Ga0373927_0003748_2586_3419 275
111 3300036401 Ga0373937_0091626 Ga0373937_0091626_1805_2644 275
112 3300041405 Ga0439438_001367 Ga0439438_001367_958_1794 275
113 3300041452 Ga0451793_1494883 Ga0451793_1494883_138_971 275
114 3300041491 Ga0451833_0007252 Ga0451833_0007252_131_991 275
115 3300041492 Ga0451835_0021271 Ga0451835_0021271_126_986 275
116 3300041494 Ga0451837_0785060 Ga0451837_0785060_113_973 275
117 3300041496 Ga0451839_0257305 Ga0451839_0257305_144_1004 275
118 3300041498 Ga0451841_0376201 Ga0451841_0376201_343_1203 275
119 3300041501 Ga0451845_0959929 Ga0451845_0959929_780_1640 275
120 3300041503 Ga0451847_0757026 Ga0451847_0757026_4732_5592 275
121 3300041507 Ga0451851_0193183 Ga0451851_0193183_570_1430 275
122 3300041512 Ga0451853_2473934 Ga0451853_2473934_291_1151 275
123 3300041512 Ga0451853_3917333 Ga0451853_3917333_255_1115 275
124 3300042004 Ga0439445_0010017 Ga0439445_0010017_694_1569 275
125 3300046452 Ga0495617_018023 Ga0495617_018023_638_1483 275
126 3300046454 Ga0495592_0025962 Ga0495592_0025962_449_1294 275
127 3300046454 Ga0495592_0048305 Ga0495592_0048305_146_991 275
128 3300046454 Ga0495592_0153557 Ga0495592_0153557_275_1120 275
129 3300046454 Ga0495592_0197554 Ga0495592_0197554_177_1022 275
130 3300046455 Ga0495603_0001016 Ga0495603_0001016_9999_10844 275
131 3300046455 Ga0495603_0004014 Ga0495603_0004014_4476_5321 275
132 3300046455 Ga0495603_0004683 Ga0495603_0004683_6394_7239 275
133 3300046455 Ga0495603_0005727 Ga0495603_0005727_760_1605 275
134 3300046459 Ga0495629_0000252 Ga0495629_0000252_30078_30920 275
135 3300046459 Ga0495629_0002658 Ga0495629_0002658_10485_11330 275
136 3300046459 Ga0495629_0164369 Ga0495629_0164369_569_1414 275
137 3300046460 Ga0495638_0000001 Ga0495638_0000001_634016_634867 275
138 3300046460 Ga0495638_0014233 Ga0495638_0014233_2655_3494 275
139 3300046460 Ga0495638_0058203 Ga0495638_0058203_12_857 275
140 3300046462 Ga0495651_0000202 Ga0495651_0000202_22131_22976 275
141 3300046462 Ga0495651_0002222 Ga0495651_0002222_5910_6755 275
142 3300046462 Ga0495651_0007039 Ga0495651_0007039_5623_6465 275
143 3300046462 Ga0495651_0007427 Ga0495651_0007427_437_1282 275
144 3300046463 Ga0495653_0017053 Ga0495653_0017053_365_1210 275
145 3300046476 Ga0495662_0001795 Ga0495662_0001795_4102_4947 275
146 3300046477 Ga0495664_0002146 Ga0495664_0002146_2062_2904 275
147 3300046477 Ga0495664_0003686 Ga0495664_0003686_6225_7070 275
148 3300046492 Ga0495585_0007625 Ga0495585_0007625_3248_4093 275
149 3300046499 Ga0495594_0000146 Ga0495594_0000146_29935_30780 275
150 3300046499 Ga0495594_0007920 Ga0495594_0007920_593_1438 275
151 3300046506 Ga0495583_0022489 Ga0495583_0022489_690_1535 275
152 3300046506 Ga0495583_0043418 Ga0495583_0043418_26_871 275
153 3300046506 Ga0495583_0051834 Ga0495583_0051834_760_1605 275
154 3300046511 Ga0495608_0104358 Ga0495608_0104358_718_1563 275
155 3300046515 Ga0495620_0008691 Ga0495620_0008691_3859_4704 275
156 3300046515 Ga0495620_0024516 Ga0495620_0024516_1323_2183 275
157 3300046515 Ga0495620_0086897 Ga0495620_0086897_18_863 275
158 3300046516 Ga0495628_0017547 Ga0495628_0017547_329_1174 275
159 3300046516 Ga0495628_0020378 Ga0495628_0020378_4395_5240 275
160 3300046516 Ga0495628_0027023 Ga0495628_0027023_1448_2356 275
161 3300046517 Ga0495630_0118545 Ga0495630_0118545_153_998 275
162 3300046520 Ga0495637_0069949 Ga0495637_0069949_22_867 275
163 3300046522 Ga0495643_0001562 Ga0495643_0001562_18257_19102 275
164 3300046524 Ga0495648_0039443 Ga0495648_0039443_1556_2416 275
165 3300046526 Ga0495666_0001499 Ga0495666_0001499_8492_9337 275
166 3300046529 Ga0495652_0006075 Ga0495652_0006075_7913_8758 275
167 3300046529 Ga0495652_0015036 Ga0495652_0015036_719_1564 275
168 3300046529 Ga0495652_0039319 Ga0495652_0039319_2809_3654 275
169 3300046529 Ga0495652_0061530 Ga0495652_0061530_1672_2517 275
170 3300046531 Ga0495665_0098389 Ga0495665_0098389_267_1112 275
171 3300046533 Ga0495640_0029148 Ga0495640_0029148_577_1422 275
172 3300046535 Ga0495586_0026021 Ga0495586_0026021_1778_2623 275
173 3300046535 Ga0495586_0106497 Ga0495586_0106497_551_1396 275
174 3300046536 Ga0495587_0003618 Ga0495587_0003618_5980_6825 275
175 3300046536 Ga0495587_0003751 Ga0495587_0003751_2049_2894 275
176 3300046536 Ga0495587_0003751 Ga0495587_0003751_5561_6403 275
177 3300046536 Ga0495587_0006471 Ga0495587_0006471_3815_4660 275
178 3300046536 Ga0495587_0012492 Ga0495587_0012492_3856_4701 275
179 3300046543 Ga0495645_0014177 Ga0495645_0014177_575_1420 275
180 3300046543 Ga0495645_0024386 Ga0495645_0024386_741_1586 275
181 3300046557 Ga0495622_0004175 Ga0495622_0004175_4964_5809 275
182 3300046557 Ga0495622_0010212 Ga0495622_0010212_165_1010 275
183 3300046559 Ga0495667_0006820 Ga0495667_0006820_6773_7618 275
184 3300046559 Ga0495667_0035758 Ga0495667_0035758_2188_3033 275
185 3300046616 Ga0495668_0060715 Ga0495668_0060715_259_1104 275
186 3300046642 Ga0495634_0000126 Ga0495634_0000126_33924_34766 275
187 3300046642 Ga0495634_0000850 Ga0495634_0000850_22730_23575 275
188 3300046642 Ga0495634_0113825 Ga0495634_0113825_733_1578 275
189 3300046648 Ga0495611_0000607 Ga0495611_0000607_15445_16290 275
190 3300046648 Ga0495611_0003834 Ga0495611_0003834_2147_2992 275
191 3300046648 Ga0495611_0104954 Ga0495611_0104954_320_1165 275
192 3300046660 Ga0495625_0006624 Ga0495625_0006624_7408_8262 275
193 3300046660 Ga0495625_0043958 Ga0495625_0043958_142_1002 275
194 3300046663 Ga0495635_0002172 Ga0495635_0002172_6987_7829 275
195 3300046663 Ga0495635_0006000 Ga0495635_0006000_2877_3722 275
196 3300046663 Ga0495635_0122279 Ga0495635_0122279_38_883 275
197 3300046663 Ga0495635_0136958 Ga0495635_0136958_437_1282 275
198 3300046674 Ga0495588_0004680 Ga0495588_0004680_3562_4407 275
199 3300046675 Ga0495657_0018702 Ga0495657_0018702_1001_1843 275
200 3300046675 Ga0495657_0020016 Ga0495657_0020016_682_1527 275
201 3300046675 Ga0495657_0020645 Ga0495657_0020645_3654_4562 275
202 3300046675 Ga0495657_0042181 Ga0495657_0042181_230_1075 275
203 3300046678 Ga0495599_0016872 Ga0495599_0016872_882_1727 275
204 3300046679 Ga0495623_0027165 Ga0495623_0027165_2199_3044 275
205 3300046679 Ga0495623_0190288 Ga0495623_0190288_179_1024 275
206 3300046680 Ga0495646_0004802 Ga0495646_0004802_1090_1935 275
207 3300046680 Ga0495646_0021295 Ga0495646_0021295_231_1076 275
208 3300046689 Ga0495613_0002879 Ga0495613_0002879_3819_4664 275
209 3300046689 Ga0495613_0004934 Ga0495613_0004934_9038_9883 275
210 3300046689 Ga0495613_0022277 Ga0495613_0022277_1301_2209 275
211 3300046689 Ga0495613_0035942 Ga0495613_0035942_2493_3338 275
212 3300046689 Ga0495613_0145494 Ga0495613_0145494_170_1015 275
213 3300046689 Ga0495613_0203745 Ga0495613_0203745_409_1254 275
214 3300046690 Ga0495624_0083780 Ga0495624_0083780_839_1684 275
215 3300046690 Ga0495624_0086835 Ga0495624_0086835_670_1515 275
216 3300046691 Ga0495670_0016335 Ga0495670_0016335_2781_3626 275
217 3300046692 Ga0495671_0021781 Ga0495671_0021781_349_1194 275
218 3300046694 Ga0495649_0072983 Ga0495649_0072983_847_1692 275
219 3300046794 Ga0495589_0089008 Ga0495589_0089008_447_1292 275
220 3300046809 Ga0495600_0000692 Ga0495600_0000692_6495_7340 275
221 3300046809 Ga0495600_0001549 Ga0495600_0001549_3772_4617 275
222 3300046809 Ga0495600_0001980 Ga0495600_0001980_10582_11424 275
223 3300046809 Ga0495600_0016454 Ga0495600_0016454_614_1459 275
224 3300046809 Ga0495600_0065226 Ga0495600_0065226_231_1076 275
225 3300046810 Ga0495660_0004278 Ga0495660_0004278_1057_1902 275
226 3300046810 Ga0495660_0031557 Ga0495660_0031557_1668_2513 275
227 3300047315 Ga0495581_0051692 Ga0495581_0051692_1263_2108 275
228 3300047317 Ga0495604_0000268 Ga0495604_0000268_14671_15513 275
229 3300047317 Ga0495604_0000371 Ga0495604_0000371_17450_18295 275
230 3300047317 Ga0495604_0000590 Ga0495604_0000590_7099_7944 275
231 3300047317 Ga0495604_0001464 Ga0495604_0001464_870_1715 275
232 3300047317 Ga0495604_0052404 Ga0495604_0052404_1467_2375 275
233 3300047318 Ga0495636_0003052 Ga0495636_0003052_2522_3367 275
234 3300047318 Ga0495636_0075648 Ga0495636_0075648_31_876 275
235 3300047319 Ga0495674_0003867 Ga0495674_0003867_10202_11044 275
236 3300047321 Ga0495676_0003232 Ga0495676_0003232_1908_2753 275
237 3300047321 Ga0495676_0008319 Ga0495676_0008319_2649_3491 275
238 3300047321 Ga0495676_0009530 Ga0495676_0009530_4942_5787 275
239 3300047321 Ga0495676_0011510 Ga0495676_0011510_821_1666 275
240 3300047321 Ga0495676_0023011 Ga0495676_0023011_383_1228 275
241 3300047321 Ga0495676_0057166 Ga0495676_0057166_1651_2496 275
242 3300047322 Ga0495680_0008304 Ga0495680_0008304_6602_7510 275
243 3300047323 Ga0495683_0001134 Ga0495683_0001134_4422_5267 275
244 3300047323 Ga0495683_0177722 Ga0495683_0177722_96_941 275
245 3300047443 Ga0495687_006503 Ga0495687_006503_5195_6040 275
246 3300047443 Ga0495687_008475 Ga0495687_008475_4787_5632 275
247 3300047443 Ga0495687_010426 Ga0495687_010426_2279_3121 275
248 3300047443 Ga0495687_015572 Ga0495687_015572_363_1208 275
249 3300047443 Ga0495687_062066 Ga0495687_062066_336_1181 275
250 3300047444 Ga0495675_0015816 Ga0495675_0015816_3291_4136 275
251 3300047444 Ga0495675_0089473 Ga0495675_0089473_437_1282 275
252 3300047444 Ga0495675_0130530 Ga0495675_0130530_676_1515 275
253 3300047446 Ga0495679_016834 Ga0495679_016834_658_1509 275
254 3300047471 Ga0495684_0015448 Ga0495684_0015448_3286_4131 275
255 3300047471 Ga0495684_0141363 Ga0495684_0141363_437_1282 275
256 3300047673 Ga0495593_0004881 Ga0495593_0004881_2337_3182 275
257 3300047673 Ga0495593_0051361 Ga0495593_0051361_1022_1867 275
258 3300048088 Ga0495602_0061355 Ga0495602_0061355_426_1271 275
259 3300048089 Ga0495614_0007926 Ga0495614_0007926_2054_2896 275
260 3300048089 Ga0495614_0015134 Ga0495614_0015134_2025_2870 275
261 3300048089 Ga0495614_0039419 Ga0495614_0039419_980_1825 275
262 3300048907 Ga0496104_0059281 Ga0496104_0059281_1813_2664 275
263 3300048908 Ga0496105_0022002 Ga0496105_0022002_3264_4115 275
264 3300048922 Ga0496119_0001056 Ga0496119_0001056_20735_21718 275
265 3300048922 Ga0496119_0001056 Ga0496119_0001056_24682_25533 275
266 3300048923 Ga0496120_0000170 Ga0496120_0000170_13478_14461 275
267 3300048923 Ga0496120_0000170 Ga0496120_0000170_9663_10514 275
268 3300050491 nmdc:mga00v17_195280_c1 nmdc:mga00v17_195280_c1_359_1198 275
269 3300050492 nmdc:mga0yw44_123274_c1 nmdc:mga0yw44_123274_c1_507_1346 275
270 3300050494 nmdc:mga06z11_9260_c1 nmdc:mga06z11_9260_c1_2223_3071 275
271 3300053077 Ga0495601_0009310 Ga0495601_0009310_4561_5406 275
272 3300053077 Ga0495601_0028152 Ga0495601_0028152_909_1754 275
273 3300053078 Ga0495612_0001284 Ga0495612_0001284_7277_8122 275
274 3300053079 Ga0500610_0089355 Ga0500610_0089355_672_1517 275
275 3300053086 Ga0500578_0181827 Ga0500578_0181827_196_1083 275
276 3300053088 Ga0500644_0022865 Ga0500644_0022865_81_929 275
277 3300053088 Ga0500644_0063067 Ga0500644_0063067_256_1101 275
278 3300053131 Ga0500652_009487 Ga0500652_009487_830_1717 275
279 3300053134 Ga0500658_0142484 Ga0500658_0142484_92_952 275
280 3300053137 Ga0500561_0002589 Ga0500561_0002589_389_1234 275
281 3300053140 Ga0500573_0066216 Ga0500573_0066216_1002_1847 275
282 3300053149 Ga0500600_0184390 Ga0500600_0184390_64_948 275
283 3300053153 Ga0500616_0000363 Ga0500616_0000363_29147_30013 275
284 3300053158 Ga0500627_0013607 Ga0500627_0013607_1500_2366 275
285 3300053161 Ga0500634_0144094 Ga0500634_0144094_22_867 275
286 3300053177 Ga0500636_0048615 Ga0500636_0048615_1272_2117 275
287 iso_pu_bacteria 2842217011 2842217064 275

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

31

221

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

37

261

0.89

PF08659

KR

KR domain

31

210

0.84

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

33

204

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ehd-assembly1.cif.gz_B crystal structure analysis of oxidoreductase 0.9487 1 178
7e6o-assembly1.cif.gz_C crystal structure of polyol dehydrogenase from paracoccus denitrificans 0.947 3 180
7e6o-assembly1.cif.gz_A crystal structure of polyol dehydrogenase from paracoccus denitrificans 0.9465 3 180
3m1a-assembly6.cif.gz_J the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9328 2 274
3m1a-assembly6.cif.gz_J the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9294 2 274
ID Description Score Start End Superfamily
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9676 83 179 3.40.50.720
af_A0A1D6ED38_49_231_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9619 2 174 3.40.50.720
af_Q54WM6_4_292_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9561 2 275 3.40.50.720
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9541 3 179 3.40.50.720
af_Q869L6_6_285_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9513 2 275 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Q5SBG4-F1-model_v4 SDR family oxidoreductase 0.9723 1 206 GO:0016491
AF-A0A356HP90-F1-model_v4 deleted 0.9648 81 184
AF-A0A316FYC3-F1-model_v4 Short-subunit dehydrogenase 0.9622 2 275 GO:0016491
AF-A0A1Q6KX94-F1-model_v4 deleted 0.9618 3 172
AF-A0A3D9NWM5-F1-model_v4 deleted 0.9612 2 275

Feature Viewer

pLDDT pTM Quality
93.49 0.92 High
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Predicted Structure (AlphaFold2)

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