F388012

General Info

Members Datasets Scaffolds Average Seq Length
287 186 574 318

Family's Representative Sequence

Representative Sequence 3300013102|Ga0157371_10037465|Ga0157371_100374653
Length 337
Sequence MTIPLPAEAPGGTALKSAATGLTATVQVPGTSANLGPGFDSLGLAVSLYDTLSVGTLPGGVLEFDLRGEGVEELPRDSSHLVVQAMDLAFARLGYRRPGLRITARNVLPHGRGLGSSASAIVAAITAANALVDAPDRQDTQWVLQLASEMEGHPDNVAPAIFGAVAISWREGEVYFSTKVTPSPEVVPVVAIPDYEVKTELARRLLPATVPHADAAANSGRTALLVHALKDAPELLTAGTRDYLHQDYRTEAMPESAALVAELRAAGHAAFISGAGPTVMALANGEAEALAVVQSIESRSAGKGTPGEKAGGAGVSWRVLRLSVDLEGAKVEVHPGS

Samples

Sample ID Description Type Environment
1 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
23 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
32 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
33 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
57 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
65 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
73 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
74 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
75 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
76 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
77 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
78 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
79 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
80 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
81 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
82 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
83 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
84 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
85 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
86 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
87 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
88 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
89 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
90 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
91 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
92 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
93 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
94 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
98 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
99 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
100 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
101 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
106 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
111 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
112 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
115 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
116 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
117 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
118 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
119 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
122 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
126 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
132 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
135 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
150 2643221561 Nocardioides sp. Root151 Isolate Unclassified
151 2643221696 Nocardioides sp. Root140 Isolate Unclassified
152 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
153 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
154 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
155 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
156 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
157 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
158 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
159 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
160 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
161 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
162 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
163 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
164 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
165 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
166 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
167 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
168 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
169 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
170 2931396565 Pseudomonas sp. DR48 Isolate Rhizosphere
171 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
172 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
173 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
174 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
175 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
176 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
177 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
178 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
179 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
180 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
181 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
182 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
183 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
184 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
185 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
186 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.02
Metatranscriptomes 1.74
Isolates 13.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.88
Nodule 0.35
Rhizoplane 5.23
Rhizosphere 81.88
Stem 0
Stem Tuber 0
Unclassified 0.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157371_10037465 3300013102 Bacteria 3470
2 LJQas_1002736 3300000549 Bacteria 2426
3 JGI25152J39213_1000114 3300002773 Bacteria 56359
4 rootH2_10230832 3300003320 Bacteria 1989
5 rootL2_10100473 3300003322 Bacteria 2100
6 Ga0065714_10013199 3300005288 Bacteria 4455
7 Ga0070658_10007737 3300005327 Bacteria 8659
8 Ga0070666_10044941 3300005335 Bacteria 2960
9 Ga0070680_100002557 3300005336 Bacteria 13456
10 Ga0070669_100049605 3300005353 Bacteria 3064
11 Ga0070674_100008268 3300005356 Bacteria 6186
12 Ga0070678_100066095 3300005456 Bacteria 2687
13 Ga0070681_10092701 3300005458 Bacteria 2969
14 Ga0070685_10167629 3300005466 Bacteria 1405
15 Ga0070679_100011660 3300005530 Bacteria 8377
16 Ga0070679_100066476 3300005530 Bacteria 3593
17 Ga0068856_100076020 3300005614 Bacteria 3327
18 Ga0068860_100001468 3300005843 Bacteria 25481
19 Ga0081455_10006155 3300005937 Bacteria 12944
20 Ga0075365_10018220 3300006038 Bacteria 4313
21 Ga0075365_10089182 3300006038 Bacteria 2099
22 Ga0075365_10110285 3300006038 Bacteria 1890
23 Ga0075368_10148621 3300006042 Bacteria 978
24 Ga0075364_10303014 3300006051 Bacteria 1088
25 Ga0105251_10009980 3300009011 Bacteria 5554
26 Ga0105244_10004628 3300009036 Bacteria 9413
27 Ga0105245_10272895 3300009098 Bacteria 1650
28 Ga0105245_10352914 3300009098 Bacteria 1458
29 Ga0105243_10022207 3300009148 Bacteria 4821
30 Ga0105246_10020503 3300011119 Bacteria 4241
31 Ga0105246_10023638 3300011119 Bacteria 3979
32 Ga0105246_10035811 3300011119 Bacteria 3320
33 Ga0157370_10019086 3300013104 Bacteria 6892
34 Ga0157369_10550118 3300013105 Bacteria 1193
35 Ga0206354_10182835 3300020081 Bacteria 3003
36 Ga0206353_10162527 3300020082 Bacteria 35930
37 Ga0213875_10000989 3300021388 Bacteria 20317
38 Ga0207425_1007799 3300025245 Bacteria 2791
39 Ga0209148_1002290 3300025254 Bacteria 6895
40 Ga0209148_1006475 3300025254 Bacteria 2536
41 Ga0209129_1000028 3300025258 Bacteria 405451
42 Ga0209025_1000112 3300025294 Bacteria 218958
43 Ga0209051_1032737 3300025303 Bacteria 1978
44 Ga0207697_10003091 3300025315 Bacteria 8332
45 Ga0207697_10007857 3300025315 Bacteria 4716
46 Ga0207655_1004006 3300025728 Bacteria 10648
47 Ga0207655_1004384 3300025728 Bacteria 10025
48 Ga0207655_1045169 3300025728 Bacteria 1843
49 Ga0207713_1042847 3300025735 Bacteria 1876
50 Ga0207682_10001475 3300025893 Bacteria 10867
51 Ga0207680_10024973 3300025903 Bacteria 3289
52 Ga0207645_10000942 3300025907 Bacteria 24175
53 Ga0207705_10001621 3300025909 Bacteria 17865
54 Ga0207660_10000795 3300025917 Bacteria 20900
55 Ga0207660_10203829 3300025917 Bacteria 1546
56 Ga0207652_10004687 3300025921 Bacteria 11085
57 Ga0207650_10026806 3300025925 Bacteria 4116
58 Ga0207687_10274752 3300025927 Bacteria 1348
59 Ga0207669_10021461 3300025937 Bacteria 3411
60 Ga0207691_10005954 3300025940 Bacteria 11778
61 Ga0207691_10189725 3300025940 Bacteria 1793
62 Ga0207658_10310269 3300025986 Bacteria 1362
63 Ga0207702_10128951 3300026078 Bacteria 2274
64 Ga0207683_10003254 3300026121 Bacteria 14168
65 Ga0207428_10016364 3300027907 Bacteria 6382
66 Ga0268264_10000238 3300028381 Bacteria 105229
67 Ga0307408_100007555 3300031548 Bacteria 7187
68 Ga0307408_100030825 3300031548 Bacteria 3727
69 Ga0307408_100050218 3300031548 Bacteria 2999
70 Ga0307408_100331984 3300031548 Bacteria 1284
71 Ga0307408_100394817 3300031548 Bacteria 1186
72 Ga0307405_10002941 3300031731 Bacteria 7690
73 Ga0307405_10058658 3300031731 Bacteria 2423
74 Ga0307405_10080082 3300031731 Bacteria 2131
75 Ga0307405_10122522 3300031731 Bacteria 1781
76 Ga0307405_10186947 3300031731 Bacteria 1492
77 Ga0307413_10049431 3300031824 Bacteria 2520
78 Ga0307413_10062770 3300031824 Bacteria 2300
79 Ga0307413_10157476 3300031824 Bacteria 1591
80 Ga0307413_10184147 3300031824 Bacteria 1492
81 Ga0307410_10020555 3300031852 Bacteria 4040
82 Ga0307410_10034047 3300031852 Bacteria 3295
83 Ga0307410_10038346 3300031852 Bacteria 3138
84 Ga0307410_10042098 3300031852 Bacteria 3016
85 Ga0307410_10059090 3300031852 Bacteria 2616
86 Ga0307410_10136063 3300031852 Bacteria 1811
87 Ga0307407_10025041 3300031903 Bacteria 3139
88 Ga0307407_10068231 3300031903 Bacteria 2105
89 Ga0307407_10090477 3300031903 Bacteria 1874
90 Ga0307407_10094665 3300031903 Bacteria 1839
91 Ga0307412_10008053 3300031911 Bacteria 6005
92 Ga0307412_10014208 3300031911 Bacteria 4691
93 Ga0307412_10022205 3300031911 Bacteria 3886
94 Ga0307412_10042749 3300031911 Bacteria 2947
95 Ga0307412_10092160 3300031911 Bacteria 2123
96 Ga0307412_10136090 3300031911 Bacteria 1792
97 Ga0307409_100017958 3300031995 Bacteria 4734
98 Ga0307409_100039037 3300031995 Bacteria 3519
99 Ga0307409_100065054 3300031995 Bacteria 2867
100 Ga0307409_100096088 3300031995 Bacteria 2443
101 Ga0307409_100175248 3300031995 Bacteria 1892
102 Ga0307409_100178154 3300031995 Bacteria 1878
103 Ga0307409_100437746 3300031995 Bacteria 1259
104 Ga0307416_100054535 3300032002 Bacteria 3214
105 Ga0307416_100130716 3300032002 Bacteria 2259
106 Ga0307416_100136741 3300032002 Bacteria 2218
107 Ga0307416_100188491 3300032002 Bacteria 1942
108 Ga0307416_100190572 3300032002 Bacteria 1933
109 Ga0307416_100245594 3300032002 Bacteria 1738
110 Ga0307416_100294935 3300032002 Bacteria 1608
111 Ga0307416_100313083 3300032002 Bacteria 1567
112 Ga0307416_100325605 3300032002 Bacteria 1541
113 Ga0307414_10060842 3300032004 Bacteria 2673
114 Ga0307411_10059076 3300032005 Bacteria 2541
115 Ga0307411_10068280 3300032005 Bacteria 2395
116 Ga0307415_100016158 3300032126 Bacteria 4440
117 Ga0395899_0000755 3300037312 Bacteria 32009
118 Ga0395899_0044833 3300037312 Bacteria 3294
119 Ga0395899_0077803 3300037312 Bacteria 2419
120 Ga0395900_0010499 3300037418 Bacteria 9473
121 Ga0395900_0045038 3300037418 Bacteria 4544
122 Ga0395900_0052145 3300037418 Bacteria 4211
123 Ga0395900_0064640 3300037418 Bacteria 3759
124 Ga0395900_0169778 3300037418 Bacteria 2221
125 Ga0395898_0003273 3300037466 Bacteria 18206
126 Ga0395898_0015259 3300037466 Bacteria 7883
127 Ga0395898_0043372 3300037466 Bacteria 4432
128 Ga0395898_0066495 3300037466 Bacteria 3492
129 Ga0395898_0072126 3300037466 Bacteria 3336
130 Ga0395905_0024223 3300037471 Bacteria 5729
131 Ga0395905_0228364 3300037471 Bacteria 1741
132 Ga0436364_0304524 3300037853 Bacteria 28242
133 Ga0395901_0004494 3300038443 Bacteria 14064
134 Ga0395901_0071201 3300038443 Bacteria 3623
135 Ga0395901_0079743 3300038443 Bacteria 3418
136 Ga0395901_0186187 3300038443 Bacteria 2177
137 Ga0395901_0196844 3300038443 Bacteria 2113
138 Ga0395901_0222516 3300038443 Bacteria 1972
139 Ga0439436_0001615 3300041404 Bacteria 6562
140 Ga0439436_0048157 3300041404 Bacteria 1209
141 Ga0439438_047063 3300041405 Bacteria 1106
142 Ga0439439_0000520 3300041406 Bacteria 6640
143 Ga0439439_0001582 3300041406 Bacteria 4587
144 Ga0439466_0013351 3300041411 Bacteria 3008
145 Ga0439466_0022055 3300041411 Bacteria 2251
146 Ga0439465_0004420 3300041413 Bacteria 4550
147 Ga0451853_0914722 3300041512 Bacteria 1029
148 Ga0439433_0000030 3300041999 Bacteria 17674
149 Ga0439433_0003532 3300041999 Bacteria 3359
150 Ga0439433_0012721 3300041999 Bacteria 1846
151 Ga0439442_000016 3300042002 Bacteria 46336
152 Ga0439442_000103 3300042002 Bacteria 20871
153 Ga0439442_004587 3300042002 Bacteria 2745
154 Ga0439432_024107 3300042006 Bacteria 2000
155 Ga0439449_0000891 3300042007 Bacteria 11645
156 Ga0439449_0009348 3300042007 Bacteria 3715
157 Ga0439449_0025766 3300042007 Bacteria 2197
158 Ga0439452_026688 3300042010 Bacteria 1455
159 Ga0439454_004230 3300042011 Bacteria 1642
160 Ga0439457_000129 3300042014 Bacteria 18872
161 Ga0439457_001465 3300042014 Bacteria 7085
162 Ga0439462_0006809 3300042015 Bacteria 2851
163 Ga0450919_000120 3300042121 Bacteria 7920
164 Ga0450920_000095 3300042122 Bacteria 11676
165 Ga0450920_003509 3300042122 Bacteria 2721
166 Ga0450920_009205 3300042122 Bacteria 1815
167 Ga0450920_022649 3300042122 Bacteria 1217
168 Ga0450907_000274 3300042146 Bacteria 17342
169 Ga0450907_010704 3300042146 Bacteria 1521
170 Ga0439446_0008276 3300042156 Bacteria 2757
171 Ga0450908_000249 3300042184 Bacteria 10628
172 Ga0450909_001750 3300042185 Bacteria 3054
173 Ga0439434_0000367 3300042435 Bacteria 12875
174 Ga0439434_0000407 3300042435 Bacteria 12239
175 Ga0450918_001110 3300042531 Bacteria 5535
176 Ga0466965_0046960 3300044683 Bacteria 2138
177 Ga0466966_0085917 3300044684 Bacteria 1956
178 Ga0466966_0125095 3300044684 Bacteria 1577
179 Ga0466961_0211872 3300044693 Bacteria 1196
180 Ga0466963_0156115 3300044694 Bacteria 1586
181 Ga0466963_0253671 3300044694 Bacteria 1234
182 Ga0466970_0085887 3300044765 Bacteria 1705
183 Ga0466957_0112668 3300044842 Bacteria 1726
184 Ga0466957_0313466 3300044842 Bacteria 1057
185 Ga0466960_0047738 3300044901 Bacteria 2055
186 Ga0466967_0178694 3300045976 Bacteria 2000
187 Ga0466967_0204032 3300045976 Bacteria 1873
188 Ga0466967_0396457 3300045976 Bacteria 1342
189 Ga0495638_0056445 3300046460 Bacteria 2437
190 Ga0495653_0002348 3300046463 Bacteria 15031
191 Ga0495653_0028724 3300046463 Bacteria 4446
192 Ga0495580_0012354 3300046472 Bacteria 6551
193 Ga0495582_0078850 3300046473 Bacteria 1827
194 Ga0495639_0013876 3300046475 Bacteria 3483
195 Ga0495664_0010688 3300046477 Bacteria 5155
196 Ga0495594_0012717 3300046499 Bacteria 4391
197 Ga0495630_0056481 3300046517 Bacteria 2942
198 Ga0495665_0013383 3300046531 Bacteria 4437
199 Ga0495665_0061856 3300046531 Bacteria 1977
200 Ga0495586_0038846 3300046535 Bacteria 2558
201 Ga0495586_0056597 3300046535 Bacteria 2127
202 Ga0495586_0091125 3300046535 Bacteria 1684
203 Ga0495587_0002832 3300046536 Bacteria 11616
204 Ga0495645_0056629 3300046543 Bacteria 2846
205 Ga0495667_0009581 3300046559 Bacteria 6566
206 Ga0495656_0024667 3300046615 Bacteria 2377
207 Ga0495588_0021527 3300046674 Bacteria 3177
208 Ga0495657_0098268 3300046675 Bacteria 1868
209 Ga0495623_0064667 3300046679 Bacteria 2289
210 Ga0495670_0011139 3300046691 Bacteria 4419
211 Ga0495600_0001436 3300046809 Bacteria 13179
212 Ga0495600_0195077 3300046809 Bacteria 1301
213 Ga0495581_0008147 3300047315 Bacteria 6068
214 Ga0495581_0017167 3300047315 Bacteria 4206
215 Ga0495636_0041495 3300047318 Bacteria 1910
216 Ga0495680_0060700 3300047322 Bacteria 2913
217 Ga0495675_0028144 3300047444 Bacteria 3583
218 Ga0495681_0039677 3300047470 Bacteria 2297
219 Ga0495593_0014713 3300047673 Bacteria 4447
220 Ga0496101_0214645 3300048904 Bacteria 1491
221 Ga0496102_0160076 3300048905 Bacteria 2117
222 Ga0496103_0025190 3300048906 Bacteria 3594
223 Ga0496106_0036646 3300048909 Bacteria 3668
224 Ga0496107_0178125 3300048910 Bacteria 1578
225 Ga0496108_0028516 3300048911 Bacteria 4619
226 Ga0496109_0037088 3300048912 Bacteria 4403
227 Ga0496109_0050389 3300048912 Bacteria 3792
228 Ga0496109_0086048 3300048912 Bacteria 2903
229 Ga0496110_0033485 3300048913 Bacteria 4445
230 Ga0496111_0115650 3300048914 Bacteria 1977
231 Ga0496111_0163083 3300048914 Unclassified 1655
232 Ga0496112_0058364 3300048915 Bacteria 3800
233 Ga0496113_0108575 3300048916 Bacteria 2157
234 Ga0496113_0195557 3300048916 Bacteria 1606
235 Ga0496125_0019635 3300048928 Bacteria 6365
236 Ga0496125_0058598 3300048928 Bacteria 3110
237 Ga0496126_0221080 3300048929 Bacteria 1591
238 Ga0501317_000634 3300049533 Bacteria 2610
239 Ga0501321_001096 3300049537 Bacteria 2052
240 Ga0501032_0000380 3300049569 Bacteria 36690
241 Ga0501032_0002253 3300049569 Bacteria 15173
242 Ga0501034_0000051 3300049571 Bacteria 210960
243 Ga0501037_0064507 3300049573 Bacteria 2669
244 Ga0501038_0041198 3300049574 Bacteria 4028
245 Ga0501038_0042939 3300049574 Bacteria 3935
246 Ga0501043_0040000 3300049579 Bacteria 3685
247 nmdc:mga0yw44_25836_c1 3300050492 Bacteria 3346
248 nmdc:mga0yw44_41957_c1 3300050492 Bacteria 2726
249 Ga0587090_001634 3300059510 Bacteria 2313
250 2555231120 2554235227 Bacteria 3637389
251 2643828304 2643221561 Bacteria 4984412
252 2644535119 2643221696 Bacteria 5431823
253 2655032167 2654587600 Bacteria 3911798
254 2691514489 2690315906 Bacteria 4517044
255 2775655181 2775506735 Bacteria 4556596
256 2808878613 2808606366 Bacteria 4415912
257 2808891806 2808606370 Bacteria 4942454
258 2808896936 2808606371 Bacteria 4251511
259 2812320644 2811994871 Bacteria 4497550
260 2837272326 2837268691 Bacteria 7850704
261 2844849431 2844849076 Bacteria 4091819
262 2857741426 2857740372 Bacteria 4782044
263 2904499960 2904497146 Bacteria 4731781
264 2904776531 2904776348 Bacteria 4658726
265 2910809955 2910809715 Bacteria 4982797
266 2919037655 2919034639 Bacteria 4763403
267 2919052145 2919051321 Bacteria 4210889
268 2919061796 2919059106 Bacteria 4991624
269 2919391311 2919391150 Bacteria 4884741
270 2919542046 2919538618 Bacteria 4677069
271 2931403376 2931396565 Bacteria 7251677
272 2932429139 2932426870 Bacteria 4547726
273 2933420623 2933418574 Bacteria 4476724
274 2939598543 2939598168 Bacteria 4687164
275 2939648972 2939647034 Bacteria 4681660
276 2939676166 2939674588 Bacteria 4844420
277 2945921312 2945920336 Bacteria 4501603
278 2945942513 2945941187 Bacteria 4682474
279 2945959729 2945956166 Bacteria 5110334
280 2946026314 2946024296 Bacteria 3508095
281 2946038443 2946037020 Bacteria 4900426
282 2946062258 2946059875 Bacteria 4386623
283 2953999717 2953998280 Bacteria 4812144
284 2974306428 2974302888 Bacteria 4369871
285 8004022180 8004021418 Bacteria 4313954
286 8004027803 8004025490 Bacteria 4327753
287 8054613211 8054609563 Bacteria 5170090
288 Ga0157371_10037465
289 LJQas_1002736
290 JGI25152J39213_1000114
291 rootH2_10230832
292 rootL2_10100473
293 Ga0065714_10013199
294 Ga0070658_10007737
295 Ga0070666_10044941
296 Ga0070680_100002557
297 Ga0070669_100049605
298 Ga0070674_100008268
299 Ga0070678_100066095
300 Ga0070681_10092701
301 Ga0070685_10167629
302 Ga0070679_100011660
303 Ga0070679_100066476
304 Ga0068856_100076020
305 Ga0068860_100001468
306 Ga0081455_10006155
307 Ga0075365_10018220
308 Ga0075365_10089182
309 Ga0075365_10110285
310 Ga0075368_10148621
311 Ga0075364_10303014
312 Ga0105251_10009980
313 Ga0105244_10004628
314 Ga0105245_10272895
315 Ga0105245_10352914
316 Ga0105243_10022207
317 Ga0105246_10020503
318 Ga0105246_10023638
319 Ga0105246_10035811
320 Ga0157370_10019086
321 Ga0157369_10550118
322 Ga0206354_10182835
323 Ga0206353_10162527
324 Ga0213875_10000989
325 Ga0207425_1007799
326 Ga0209148_1002290
327 Ga0209148_1006475
328 Ga0209129_1000028
329 Ga0209025_1000112
330 Ga0209051_1032737
331 Ga0207697_10003091
332 Ga0207697_10007857
333 Ga0207655_1004006
334 Ga0207655_1004384
335 Ga0207655_1045169
336 Ga0207713_1042847
337 Ga0207682_10001475
338 Ga0207680_10024973
339 Ga0207645_10000942
340 Ga0207705_10001621
341 Ga0207660_10000795
342 Ga0207660_10203829
343 Ga0207652_10004687
344 Ga0207650_10026806
345 Ga0207687_10274752
346 Ga0207669_10021461
347 Ga0207691_10005954
348 Ga0207691_10189725
349 Ga0207658_10310269
350 Ga0207702_10128951
351 Ga0207683_10003254
352 Ga0207428_10016364
353 Ga0268264_10000238
354 Ga0307408_100007555
355 Ga0307408_100030825
356 Ga0307408_100050218
357 Ga0307408_100331984
358 Ga0307408_100394817
359 Ga0307405_10002941
360 Ga0307405_10058658
361 Ga0307405_10080082
362 Ga0307405_10122522
363 Ga0307405_10186947
364 Ga0307413_10049431
365 Ga0307413_10062770
366 Ga0307413_10157476
367 Ga0307413_10184147
368 Ga0307410_10020555
369 Ga0307410_10034047
370 Ga0307410_10038346
371 Ga0307410_10042098
372 Ga0307410_10059090
373 Ga0307410_10136063
374 Ga0307407_10025041
375 Ga0307407_10068231
376 Ga0307407_10090477
377 Ga0307407_10094665
378 Ga0307412_10008053
379 Ga0307412_10014208
380 Ga0307412_10022205
381 Ga0307412_10042749
382 Ga0307412_10092160
383 Ga0307412_10136090
384 Ga0307409_100017958
385 Ga0307409_100039037
386 Ga0307409_100065054
387 Ga0307409_100096088
388 Ga0307409_100175248
389 Ga0307409_100178154
390 Ga0307409_100437746
391 Ga0307416_100054535
392 Ga0307416_100130716
393 Ga0307416_100136741
394 Ga0307416_100188491
395 Ga0307416_100190572
396 Ga0307416_100245594
397 Ga0307416_100294935
398 Ga0307416_100313083
399 Ga0307416_100325605
400 Ga0307414_10060842
401 Ga0307411_10059076
402 Ga0307411_10068280
403 Ga0307415_100016158
404 Ga0395899_0000755
405 Ga0395899_0044833
406 Ga0395899_0077803
407 Ga0395900_0010499
408 Ga0395900_0045038
409 Ga0395900_0052145
410 Ga0395900_0064640
411 Ga0395900_0169778
412 Ga0395898_0003273
413 Ga0395898_0015259
414 Ga0395898_0043372
415 Ga0395898_0066495
416 Ga0395898_0072126
417 Ga0395905_0024223
418 Ga0395905_0228364
419 Ga0436364_0304524
420 Ga0395901_0004494
421 Ga0395901_0071201
422 Ga0395901_0079743
423 Ga0395901_0186187
424 Ga0395901_0196844
425 Ga0395901_0222516
426 Ga0439436_0001615
427 Ga0439436_0048157
428 Ga0439438_047063
429 Ga0439439_0000520
430 Ga0439439_0001582
431 Ga0439466_0013351
432 Ga0439466_0022055
433 Ga0439465_0004420
434 Ga0451853_0914722
435 Ga0439433_0000030
436 Ga0439433_0003532
437 Ga0439433_0012721
438 Ga0439442_000016
439 Ga0439442_000103
440 Ga0439442_004587
441 Ga0439432_024107
442 Ga0439449_0000891
443 Ga0439449_0009348
444 Ga0439449_0025766
445 Ga0439452_026688
446 Ga0439454_004230
447 Ga0439457_000129
448 Ga0439457_001465
449 Ga0439462_0006809
450 Ga0450919_000120
451 Ga0450920_000095
452 Ga0450920_003509
453 Ga0450920_009205
454 Ga0450920_022649
455 Ga0450907_000274
456 Ga0450907_010704
457 Ga0439446_0008276
458 Ga0450908_000249
459 Ga0450909_001750
460 Ga0439434_0000367
461 Ga0439434_0000407
462 Ga0450918_001110
463 Ga0466965_0046960
464 Ga0466966_0085917
465 Ga0466966_0125095
466 Ga0466961_0211872
467 Ga0466963_0156115
468 Ga0466963_0253671
469 Ga0466970_0085887
470 Ga0466957_0112668
471 Ga0466957_0313466
472 Ga0466960_0047738
473 Ga0466967_0178694
474 Ga0466967_0204032
475 Ga0466967_0396457
476 Ga0495638_0056445
477 Ga0495653_0002348
478 Ga0495653_0028724
479 Ga0495580_0012354
480 Ga0495582_0078850
481 Ga0495639_0013876
482 Ga0495664_0010688
483 Ga0495594_0012717
484 Ga0495630_0056481
485 Ga0495665_0013383
486 Ga0495665_0061856
487 Ga0495586_0038846
488 Ga0495586_0056597
489 Ga0495586_0091125
490 Ga0495587_0002832
491 Ga0495645_0056629
492 Ga0495667_0009581
493 Ga0495656_0024667
494 Ga0495588_0021527
495 Ga0495657_0098268
496 Ga0495623_0064667
497 Ga0495670_0011139
498 Ga0495600_0001436
499 Ga0495600_0195077
500 Ga0495581_0008147
501 Ga0495581_0017167
502 Ga0495636_0041495
503 Ga0495680_0060700
504 Ga0495675_0028144
505 Ga0495681_0039677
506 Ga0495593_0014713
507 Ga0496101_0214645
508 Ga0496102_0160076
509 Ga0496103_0025190
510 Ga0496106_0036646
511 Ga0496107_0178125
512 Ga0496108_0028516
513 Ga0496109_0037088
514 Ga0496109_0050389
515 Ga0496109_0086048
516 Ga0496110_0033485
517 Ga0496111_0115650
518 Ga0496111_0163083
519 Ga0496112_0058364
520 Ga0496113_0108575
521 Ga0496113_0195557
522 Ga0496125_0019635
523 Ga0496125_0058598
524 Ga0496126_0221080
525 Ga0501317_000634
526 Ga0501321_001096
527 Ga0501032_0000380
528 Ga0501032_0002253
529 Ga0501034_0000051
530 Ga0501037_0064507
531 Ga0501038_0041198
532 Ga0501038_0042939
533 Ga0501043_0040000
534 nmdc:mga0yw44_25836_c1
535 nmdc:mga0yw44_41957_c1
536 Ga0587090_001634
537 2555231120
538 2643828304
539 2644535119
540 2655032167
541 2691514489
542 2775655181
543 2808878613
544 2808891806
545 2808896936
546 2812320644
547 2837272326
548 2844849431
549 2857741426
550 2904499960
551 2904776531
552 2910809955
553 2919037655
554 2919052145
555 2919061796
556 2919391311
557 2919542046
558 2931403376
559 2932429139
560 2933420623
561 2939598543
562 2939648972
563 2939676166
564 2945921312
565 2945942513
566 2945959729
567 2946026314
568 2946038443
569 2946062258
570 2953999717
571 2974306428
572 8004022180
573 8004027803
574 8054613211

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00288

GHMP_kinases_N

GHMP kinases N terminal domain

80

164

0.9

PF08544

GHMP_kinases_C

GHMP kinases C terminal

221

301

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6cyz-assembly1.cif.gz_B mycobacterial homoserine kinase thrb in complex with amppnp 0.9386 15 324
6cyz-assembly1.cif.gz_B mycobacterial homoserine kinase thrb in complex with amppnp 0.9355 15 324
5was-assembly1.cif.gz_A-2 corynebacterium glutamicum hydrolyzed homoserine kinase 0.913 19 184
5wat-assembly1.cif.gz_A-4 corynebacterium glutamicum full length homoserine kinase 0.899 15 328
5wat-assembly1.cif.gz_B corynebacterium glutamicum full length homoserine kinase 0.8966 15 328
ID Description Score Start End Superfamily
af_P9WKE7_13_177_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9577 25 183 3.30.230.10
af_Q2FYV2_4_165_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9233 25 184 3.30.230.10
af_P9WKE7_178_307_3.30.70.890 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;GHMP kinase, C-terminal domain 0.923 186 316 3.30.70.890
af_P9WKE7_13_177_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9183 25 183 3.30.230.10
af_Q2FYV2_4_165_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.907 25 184 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A0K2RR87-F1-model_v4 Homoserine kinase (HK) (HSK) (EC 2.7.1.39) 0.9976 47 328 GO:0004413
GO:0005524
GO:0005737
GO:0009088
AF-A0A3N9W572-F1-model_v4 deleted 0.997 201 281
AF-A0A542IRY5-F1-model_v4 Homoserine kinase (HK) (HSK) (EC 2.7.1.39) 0.9951 14 328 GO:0004413
GO:0005524
GO:0005737
GO:0009088
AF-A0A0K2RR87-F1-model_v4 Homoserine kinase (HK) (HSK) (EC 2.7.1.39) 0.9905 47 328 GO:0004413
GO:0005524
GO:0005737
GO:0009088
AF-A0A542IRY5-F1-model_v4 Homoserine kinase (HK) (HSK) (EC 2.7.1.39) 0.9888 14 328 GO:0004413
GO:0005524
GO:0005737
GO:0009088

Map