F387756

General Info

Members Datasets Scaffolds Average Seq Length
286 199 240 208

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8048127548|8048135806
Length 223
Sequence TTCGTLARLRGYAAHMGAYLQGSLFDQADDIGLGSLRGTRRTELGSGAWIDLLPGWLRGADDLFTRLVAEVPWKAERRHMYEQMVDVPRLLAFYGAEDPLPHPVLSEAREALSAYYATELGEPFTTAGLCYYRDGRDSVAWHGDRIGRGGTEDTMVAILSVGAPRDLLLRPRGGGSALRRPLGHGDLLVMGGSCQRTWEHAIPKSSRATGPRISIQFRPSGVA

Samples

Sample ID Description Type Environment
1 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
2 2547132424 Nocardia nova SH22a Isolate Unclassified
3 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
4 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
5 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
6 2643221548 Streptomyces sp. Root55 Isolate Unclassified
7 2643221578 Streptomyces sp. Root63 Isolate Unclassified
8 2643221647 Streptomyces sp. Root369 Isolate Unclassified
9 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
10 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
11 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
12 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
13 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
14 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
15 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
16 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
17 2862574272 Streptomyces sp. AcE210 Isolate Nodule
18 2867428634 Streptomyces sp. RP5T Isolate Unclassified
19 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
20 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
21 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
22 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
23 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
24 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
25 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
26 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
27 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
28 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
29 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
30 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
31 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
32 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
33 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
34 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
35 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
36 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
37 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
38 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
39 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
40 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
41 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
42 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
43 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
48 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
56 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
57 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
58 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
70 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
71 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
72 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
73 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
74 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
75 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
78 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
79 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
82 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
83 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
84 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
85 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
86 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
87 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
88 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
89 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
90 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
101 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
102 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
103 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
104 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
107 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
108 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
109 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
110 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
111 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
112 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
113 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
114 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
115 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
116 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
117 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
120 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
121 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
124 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
125 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
126 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
127 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
128 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
129 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
132 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
136 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
137 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
138 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
139 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
140 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
141 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
142 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
143 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
144 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
145 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
148 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
149 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
150 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
153 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
154 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
155 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
156 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
157 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
158 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
159 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
160 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
161 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
162 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
163 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
176 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
177 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
178 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
179 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
182 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
183 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
184 3300053106 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 endosphere Metagenome Endosphere
185 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
186 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
187 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
188 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
189 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
190 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
191 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
192 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
193 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
194 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
195 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
196 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
197 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
198 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
199 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.22
Metatranscriptomes 0.7
Isolates 16.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.24
Nodule 1.4
Rhizoplane 1.05
Rhizosphere 81.82
Stem 0
Stem Tuber 0
Unclassified 10.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10029775 3300002067 Bacteria 1624
2 JGI24738J21930_10009734 3300002075 Bacteria 2155
3 JGI25160J50197_1001128 3300003354 Bacteria 13650
4 JGI25160J50197_1006703 3300003354 Bacteria 4625
5 Ga0070658_10089982 3300005327 Bacteria 2528
6 Ga0070714_100000012 3300005435 Bacteria 226258
7 Ga0070714_100768699 3300005435 Bacteria 932
8 Ga0070710_10000032 3300005437 Bacteria 64514
9 Ga0068855_100175151 3300005563 Bacteria 2428
10 Ga0068854_100088457 3300005578 Bacteria 2300
11 Ga0081455_10020714 3300005937 Bacteria 6184
12 Ga0075363_100193185 3300006048 Bacteria 1161
13 Ga0099826_10027049 3300006948 Bacteria 4220
14 Ga0105239_10234008 3300010375 Bacteria 2061
15 Ga0105246_10086796 3300011119 Bacteria 2244
16 Ga0157370_10176751 3300013104 Bacteria 1984
17 Ga0157369_10752919 3300013105 Bacteria 1002
18 Ga0157375_10598242 3300013308 Bacteria 1262
19 Ga0182008_10000505 3300014497 Bacteria 29375
20 Ga0182006_1026109 3300015261 Bacteria 2394
21 Ga0182007_10000199 3300015262 Bacteria 40278
22 Ga0182005_1011836 3300015265 Bacteria 2475
23 Ga0183367_1003 3300015688 Bacteria 814276
24 Ga0163161_10389146 3300017792 Bacteria 1116
25 Ga0197907_10638835 3300020069 Bacteria 1282
26 Ga0206354_10096591 3300020081 Bacteria 1390
27 Ga0207426_1000668 3300025302 Bacteria 41637
28 Ga0207426_1002101 3300025302 Bacteria 13718
29 Ga0207426_1002113 3300025302 Bacteria 13635
30 Ga0207426_1016323 3300025302 Bacteria 2669
31 Ga0207692_10000217 3300025898 Bacteria 19313
32 Ga0207647_10010804 3300025904 Bacteria 6427
33 Ga0207664_10000003 3300025929 Bacteria 510966
34 Ga0207667_10571573 3300025949 Bacteria 1142
35 Ga0207674_10997145 3300026116 Bacteria 807
36 Ga0307515_10000106 3300028794 Bacteria 197218
37 Ga0307511_10041755 3300030521 Bacteria 3867
38 Ga0307512_10111609 3300030522 Bacteria 1799
39 Ga0316177_1183135 3300030731 Bacteria 1874
40 Ga0314311_1098050 3300030733 Bacteria 5850
41 Ga0307509_10030429 3300031507 Bacteria 5972
42 Ga0307508_10002509 3300031616 Bacteria 19330
43 Ga0307508_10076984 3300031616 Bacteria 2914
44 Ga0307514_10003580 3300031649 Bacteria 14781
45 Ga0307516_10012404 3300031730 Bacteria 9186
46 Ga0307516_10160491 3300031730 Bacteria 1999
47 Ga0307518_10140908 3300031838 Bacteria 1682
48 Ga0307507_10004015 3300033179 Bacteria 26995
49 Ga0307507_10018760 3300033179 Bacteria 7844
50 Ga0307510_10118538 3300033180 Bacteria 2359
51 Ga0395898_0127600 3300037466 Bacteria 2437
52 Ga0451789_0332366 3300041443 Bacteria 743
53 Ga0451800_1285002 3300041459 Bacteria 795
54 Ga0451837_0184306 3300041494 Bacteria 1947
55 Ga0439442_002211 3300042002 Bacteria 3830
56 Ga0439449_0000204 3300042007 Bacteria 20810
57 Ga0439449_0052718 3300042007 Bacteria 1504
58 Ga0439457_080775 3300042014 Bacteria 747
59 Ga0466969_0066887 3300044656 Bacteria 1734
60 Ga0466972_0012741 3300044658 Bacteria 4222
61 Ga0466972_0028229 3300044658 Bacteria 2769
62 Ga0466972_0054256 3300044658 Bacteria 1929
63 Ga0466965_0005227 3300044683 Bacteria 5835
64 Ga0466965_0012661 3300044683 Bacteria 3973
65 Ga0466965_0012830 3300044683 Bacteria 3945
66 Ga0466965_0494356 3300044683 Bacteria 685
67 Ga0466966_0001137 3300044684 Bacteria 17111
68 Ga0466961_0001159 3300044693 Bacteria 16206
69 Ga0466961_0032644 3300044693 Bacteria 3346
70 Ga0466963_0000020 3300044694 Bacteria 55146
71 Ga0466963_0073102 3300044694 Bacteria 2311
72 Ga0466964_0002995 3300044706 Bacteria 6115
73 Ga0466971_0000761 3300044719 Bacteria 12951
74 Ga0466968_0264065 3300044735 Bacteria 820
75 Ga0466970_0000323 3300044765 Bacteria 23219
76 Ga0466957_0000391 3300044842 Bacteria 21460
77 Ga0466960_0003231 3300044901 Bacteria 6249
78 Ga0466960_0007666 3300044901 Bacteria 4394
79 Ga0466960_0013182 3300044901 Bacteria 3506
80 Ga0466960_0034578 3300044901 Bacteria 2356
81 Ga0466959_0000749 3300045049 Bacteria 19023
82 Ga0466958_0219534 3300045836 Bacteria 1212
83 Ga0466967_0000228 3300045976 Bacteria 24249
84 Ga0466967_0079333 3300045976 Bacteria 2959
85 Ga0466967_0094502 3300045976 Bacteria 2723
86 Ga0466967_0763061 3300045976 Bacteria 959
87 Ga0495592_0007019 3300046454 Bacteria 8421
88 Ga0495603_0021426 3300046455 Bacteria 3914
89 Ga0495603_0029645 3300046455 Bacteria 3298
90 Ga0495603_0038444 3300046455 Bacteria 2870
91 Ga0495590_0030232 3300046457 Bacteria 1898
92 Ga0495629_0003831 3300046459 Bacteria 11345
93 Ga0495629_0011908 3300046459 Bacteria 6307
94 Ga0495629_0031736 3300046459 Bacteria 3739
95 Ga0495629_0048840 3300046459 Bacteria 2967
96 Ga0495638_0074014 3300046460 Bacteria 2078
97 Ga0495638_0119545 3300046460 Bacteria 1558
98 Ga0495651_0004526 3300046462 Bacteria 10634
99 Ga0495651_0081759 3300046462 Bacteria 2438
100 Ga0495605_0006610 3300046474 Bacteria 6640
101 Ga0495662_0042751 3300046476 Bacteria 2187
102 Ga0495662_0102461 3300046476 Bacteria 1400
103 Ga0495662_0123137 3300046476 Bacteria 1273
104 Ga0495664_0000080 3300046477 Bacteria 47313
105 Ga0495585_0029647 3300046492 Bacteria 3114
106 Ga0495585_0311882 3300046492 Bacteria 771
107 Ga0495594_0041227 3300046499 Bacteria 2528
108 Ga0495594_0223568 3300046499 Bacteria 1073
109 Ga0495596_0042146 3300046500 Bacteria 1799
110 Ga0495583_0006788 3300046506 Bacteria 7397
111 Ga0495583_0144013 3300046506 Bacteria 991
112 Ga0495606_0068172 3300046507 Bacteria 2251
113 Ga0495610_0020294 3300046512 Bacteria 3692
114 Ga0495620_0005800 3300046515 Bacteria 6856
115 Ga0495620_0014166 3300046515 Bacteria 4061
116 Ga0495628_0112107 3300046516 Bacteria 2097
117 Ga0495628_0383932 3300046516 Bacteria 1028
118 Ga0495631_0003381 3300046518 Bacteria 8746
119 Ga0495631_0067782 3300046518 Bacteria 1544
120 Ga0495643_0176567 3300046522 Bacteria 1041
121 Ga0495644_0069648 3300046523 Bacteria 1322
122 Ga0495652_0055665 3300046529 Bacteria 3363
123 Ga0495652_0056809 3300046529 Bacteria 3322
124 Ga0495640_0014103 3300046533 Bacteria 6058
125 Ga0495586_0100202 3300046535 Bacteria 1607
126 Ga0495586_0225411 3300046535 Bacteria 1066
127 Ga0495587_0000196 3300046536 Bacteria 44727
128 Ga0495645_0009663 3300046543 Bacteria 6746
129 Ga0495622_0015712 3300046557 Bacteria 3520
130 Ga0495622_0022228 3300046557 Bacteria 2955
131 Ga0495667_0335003 3300046559 Bacteria 957
132 Ga0495667_0356135 3300046559 Bacteria 924
133 Ga0495656_0392499 3300046615 Bacteria 725
134 Ga0495668_0025622 3300046616 Bacteria 3350
135 Ga0495668_0058990 3300046616 Bacteria 2117
136 Ga0495634_0044033 3300046642 Bacteria 3022
137 Ga0495634_0227315 3300046642 Bacteria 1149
138 Ga0495611_0025542 3300046648 Bacteria 2575
139 Ga0495611_0026032 3300046648 Bacteria 2552
140 Ga0495625_0063625 3300046660 Bacteria 2604
141 Ga0495625_0089722 3300046660 Bacteria 2127
142 Ga0495635_0000275 3300046663 Bacteria 33061
143 Ga0495635_0667622 3300046663 Bacteria 675
144 Ga0495661_0070784 3300046665 Bacteria 2040
145 Ga0495588_0013731 3300046674 Bacteria 3862
146 Ga0495588_0113499 3300046674 Bacteria 1427
147 Ga0495657_0002849 3300046675 Bacteria 14359
148 Ga0495657_0107700 3300046675 Bacteria 1768
149 Ga0495623_0107937 3300046679 Bacteria 1690
150 Ga0495646_0000335 3300046680 Bacteria 24078
151 Ga0495658_0208758 3300046683 Bacteria 1219
152 Ga0495613_0001012 3300046689 Bacteria 21374
153 Ga0495613_0092385 3300046689 Bacteria 2191
154 Ga0495613_0178887 3300046689 Bacteria 1502
155 Ga0495624_0051275 3300046690 Bacteria 2612
156 Ga0495624_0318709 3300046690 Bacteria 936
157 Ga0495671_0017442 3300046692 Bacteria 3822
158 Ga0495649_0114495 3300046694 Bacteria 1428
159 Ga0495589_0002777 3300046794 Bacteria 9687
160 Ga0495589_0019425 3300046794 Bacteria 3483
161 Ga0495589_0023078 3300046794 Bacteria 3171
162 Ga0495589_0037488 3300046794 Bacteria 2429
163 Ga0495589_0082051 3300046794 Bacteria 1568
164 Ga0495600_0002576 3300046809 Bacteria 10449
165 Ga0495600_0089357 3300046809 Bacteria 2010
166 Ga0495600_0118822 3300046809 Bacteria 1720
167 Ga0495660_0015462 3300046810 Bacteria 4407
168 Ga0495581_0003867 3300047315 Bacteria 8614
169 Ga0495581_0061613 3300047315 Bacteria 2168
170 Ga0495604_0020531 3300047317 Bacteria 5275
171 Ga0495604_0112842 3300047317 Bacteria 1979
172 Ga0495604_0159437 3300047317 Bacteria 1595
173 Ga0495636_0005593 3300047318 Bacteria 4935
174 Ga0495636_0049496 3300047318 Bacteria 1757
175 Ga0495636_0097176 3300047318 Bacteria 1284
176 Ga0495674_0325896 3300047319 Bacteria 1250
177 Ga0495672_0318678 3300047320 Bacteria 731
178 Ga0495676_0005891 3300047321 Bacteria 11250
179 Ga0495676_0013977 3300047321 Bacteria 7192
180 Ga0495676_0015659 3300047321 Bacteria 6743
181 Ga0495676_0028357 3300047321 Bacteria 4780
182 Ga0495676_0070795 3300047321 Bacteria 2683
183 Ga0495680_0019518 3300047322 Bacteria 5719
184 Ga0495687_008597 3300047443 Bacteria 5823
185 Ga0495687_058808 3300047443 Bacteria 1593
186 Ga0495675_0020695 3300047444 Bacteria 4187
187 Ga0495685_003978 3300047447 Bacteria 4748
188 Ga0495685_019224 3300047447 Bacteria 2346
189 Ga0495685_046330 3300047447 Bacteria 1479
190 Ga0495685_052544 3300047447 Bacteria 1380
191 Ga0495681_0006520 3300047470 Bacteria 7655
192 Ga0495686_0112876 3300047472 Bacteria 1627
193 Ga0495593_0000801 3300047673 Bacteria 18167
194 Ga0495602_0120000 3300048088 Bacteria 2117
195 Ga0495614_0000107 3300048089 Bacteria 28466
196 Ga0495614_0014256 3300048089 Bacteria 3482
197 Ga0495614_0020076 3300048089 Bacteria 2890
198 Ga0501031_0059641 3300049568 Bacteria 2486
199 Ga0501033_0000856 3300049570 Bacteria 27837
200 Ga0501033_0009117 3300049570 Bacteria 7652
201 Ga0501033_0068783 3300049570 Bacteria 2603
202 Ga0501034_0036326 3300049571 Bacteria 4991
203 Ga0501034_0050440 3300049571 Bacteria 4197
204 Ga0501034_0205050 3300049571 Bacteria 1928
205 Ga0501036_0000666 3300049572 Bacteria 25235
206 Ga0501036_0006001 3300049572 Bacteria 9849
207 Ga0501037_0074429 3300049573 Bacteria 2468
208 Ga0501037_0124256 3300049573 Bacteria 1854
209 Ga0501038_0004237 3300049574 Bacteria 13331
210 Ga0501039_0060163 3300049575 Bacteria 2942
211 Ga0501042_0763776 3300049578 Bacteria 703
212 Ga0501043_0011612 3300049579 Bacteria 6895
213 Ga0501043_0025412 3300049579 Bacteria 4647
214 Ga0501046_0229797 3300049580 Bacteria 1371
215 Ga0501047_0018004 3300049581 Bacteria 6771
216 Ga0501047_0077624 3300049581 Bacteria 3194
217 Ga0501047_0278191 3300049581 Bacteria 1519
218 Ga0501048_0008453 3300049582 Bacteria 7787
219 Ga0501069_0096890 3300049585 Bacteria 1672
220 Ga0501069_0310048 3300049585 Bacteria 926
221 Ga0501070_0000250 3300049586 Bacteria 50587
222 Ga0501070_0027511 3300049586 Bacteria 4770
223 Ga0501070_0539115 3300049586 Bacteria 935
224 Ga0501074_0107483 3300049590 Bacteria 1997
225 Ga0501077_0298841 3300049593 Bacteria 1026
226 Ga0501035_0002640 3300049822 Bacteria 17462
227 Ga0501035_0027467 3300049822 Bacteria 5202
228 Ga0501044_0012429 3300049823 Bacteria 9220
229 Ga0501044_0014138 3300049823 Bacteria 8617
230 Ga0501044_0041984 3300049823 Bacteria 4761
231 nmdc:mga06z11_9205_c1 3300050494 Bacteria 4152
232 Ga0495612_0042234 3300053078 Bacteria 1861
233 Ga0500640_027501 3300053095 Bacteria 2481
234 Ga0500558_176646 3300053106 Bacteria 767
235 Ga0500560_009507 3300053107 Bacteria 2392
236 Ga0500572_021435 3300053111 Bacteria 1711
237 Ga0500608_240954 3300053122 Bacteria 713
238 Ga0500573_0167202 3300053140 Bacteria 1192
239 Ga0500633_0124494 3300053160 Bacteria 960
240 Ga0466962_0055469 3300061719 Bacteria 1893

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046492 Ga0495585_0029647 Ga0495585_0029647_2528_3073 181
2 3300046476 Ga0495662_0042751 Ga0495662_0042751_1597_2154 185
3 3300046674 Ga0495588_0013731 Ga0495588_0013731_3237_3794 185
4 3300044683 Ga0466965_0494356 Ga0466965_0494356_32_655 188
5 3300046694 Ga0495649_0114495 Ga0495649_0114495_13_579 188
6 3300013308 Ga0157375_10598242 Ga0157375_105982422 199
7 3300046459 Ga0495629_0031736 Ga0495629_0031736_917_1543 199
8 3300046557 Ga0495622_0022228 Ga0495622_0022228_1689_2315 199
9 3300046663 Ga0495635_0667622 Ga0495635_0667622_32_658 199
10 3300046674 Ga0495588_0113499 Ga0495588_0113499_681_1307 199
11 iso_pu_bacteria 2891326441 2891329452 200
12 3300046476 Ga0495662_0123137 Ga0495662_0123137_424_1050 201
13 3300046689 Ga0495613_0092385 Ga0495613_0092385_1097_1723 201
14 3300041459 Ga0451800_1285002 Ga0451800_1285002_70_678 202
15 3300049593 Ga0501077_0298841 Ga0501077_0298841_181_798 202
16 iso_pu_bacteria 2808606982 2811844793 202
17 iso_pu_bacteria 2947224130 2947224502 202
18 3300049823 Ga0501044_0014138 Ga0501044_0014138_5953_6582 204
19 iso_pu_bacteria 2547132111 2547408913 204
20 iso_pu_bacteria 2547132424 2548696786 204
21 iso_pu_bacteria 2582581313 2585306058 204
22 iso_pu_bacteria 2616644814 2616693786 204
23 iso_pu_bacteria 2643221548 2643764224 204
24 iso_pu_bacteria 2643221578 2643904265 204
25 iso_pu_bacteria 2643221647 2644265079 204
26 iso_pu_bacteria 2643221673 2644402619 204
27 iso_pu_bacteria 2643221682 2644458716 204
28 iso_pu_bacteria 2784746768 2785366180 204
29 iso_pu_bacteria 2791355406 2793982746 204
30 iso_pu_bacteria 2808606375 2808917412 204
31 iso_pu_bacteria 2862382967 2862391035 204
32 iso_pu_bacteria 2867428634 2867433816 204
33 iso_pu_bacteria 2912723979 2912726827 204
34 iso_pu_bacteria 2912757875 2912764903 204
35 iso_pu_bacteria 2919713450 2919717600 204
36 iso_pu_bacteria 2946045630 2946047242 204
37 iso_pu_bacteria 2954002825 2954009116 204
38 iso_pu_bacteria 2954380949 2954389674 204
39 iso_pu_bacteria 2954701450 2954701712 204
40 iso_pu_bacteria 2954711539 2954719190 204
41 iso_pu_bacteria 2954721474 2954729161 204
42 iso_pu_bacteria 2954731030 2954732649 204
43 iso_pu_bacteria 2954740390 2954748061 204
44 iso_pu_bacteria 2954749733 2954751528 204
45 iso_pu_bacteria 2954759201 2954767186 204
46 iso_pu_bacteria 2966598605 2966599294 204
47 iso_pu_bacteria 2990059506 2990063281 204
48 iso_pu_bacteria 3006493962 3006498647 204
49 iso_pu_bacteria 8008558824 8008560172 204
50 iso_pu_bacteria 8008574985 8008581451 204
51 iso_pu_bacteria 8025530807 8025538508 204
52 iso_pu_bacteria 8047893842 8047901555 204
53 iso_pu_bacteria 8048356638 8048357338 204
54 iso_pu_bacteria 8048369669 8048378493 204
55 iso_pu_bacteria 8048379754 8048387594 204
56 iso_pu_bacteria 8048406513 8048414152 204
57 3300005437 Ga0070710_10000032 Ga0070710_100000327 205
58 3300025898 Ga0207692_10000217 Ga0207692_1000021714 205
59 3300030731 Ga0316177_1183135 Ga0316177_11831352 205
60 3300030733 Ga0314311_1098050 Ga0314311_10980506 205
61 3300044658 Ga0466972_0028229 Ga0466972_0028229_814_1434 205
62 3300044683 Ga0466965_0012661 Ga0466965_0012661_715_1335 205
63 3300044735 Ga0466968_0264065 Ga0466968_0264065_36_656 205
64 3300044901 Ga0466960_0003231 Ga0466960_0003231_5333_5953 205
65 3300049585 Ga0501069_0096890 Ga0501069_0096890_18_644 205
66 iso_pu_bacteria 2582581312 2585301164 205
67 iso_pu_bacteria 2862574272 2862574816 205
68 3300044901 Ga0466960_0013182 Ga0466960_0013182_1334_1954 206
69 3300006048 Ga0075363_100193185 Ga0075363_1001931852 207
70 3300013104 Ga0157370_10176751 Ga0157370_101767511 207
71 3300017792 Ga0163161_10389146 Ga0163161_103891462 207
72 3300041443 Ga0451789_0332366 Ga0451789_0332366_39_662 207
73 3300042014 Ga0439457_080775 Ga0439457_080775_61_684 207
74 3300044901 Ga0466960_0034578 Ga0466960_0034578_74_724 207
75 3300002067 JGI24735J21928_10029775 JGI24735J21928_100297752 208
76 3300002075 JGI24738J21930_10009734 JGI24738J21930_100097343 208
77 3300003354 JGI25160J50197_1001128 JGI25160J50197_10011285 208
78 3300003354 JGI25160J50197_1006703 JGI25160J50197_10067035 208
79 3300005327 Ga0070658_10089982 Ga0070658_100899823 208
80 3300005435 Ga0070714_100000012 Ga0070714_100000012124 208
81 3300005435 Ga0070714_100768699 Ga0070714_1007686991 208
82 3300005563 Ga0068855_100175151 Ga0068855_1001751513 208
83 3300005578 Ga0068854_100088457 Ga0068854_1000884572 208
84 3300005937 Ga0081455_10020714 Ga0081455_100207143 208
85 3300006948 Ga0099826_10027049 Ga0099826_100270494 208
86 3300010375 Ga0105239_10234008 Ga0105239_102340082 208
87 3300011119 Ga0105246_10086796 Ga0105246_100867962 208
88 3300013105 Ga0157369_10752919 Ga0157369_107529191 208
89 3300014497 Ga0182008_10000505 Ga0182008_1000050520 208
90 3300015261 Ga0182006_1026109 Ga0182006_10261092 208
91 3300015262 Ga0182007_10000199 Ga0182007_1000019924 208
92 3300015265 Ga0182005_1011836 Ga0182005_10118362 208
93 3300015688 Ga0183367_1003 Ga0183367_1003717 208
94 3300020069 Ga0197907_10638835 Ga0197907_106388351 208
95 3300020081 Ga0206354_10096591 Ga0206354_100965912 208
96 3300025302 Ga0207426_1000668 Ga0207426_100066828 208
97 3300025302 Ga0207426_1002101 Ga0207426_10021016 208
98 3300025302 Ga0207426_1002113 Ga0207426_10021133 208
99 3300025302 Ga0207426_1016323 Ga0207426_10163233 208
100 3300025904 Ga0207647_10010804 Ga0207647_100108042 208
101 3300025929 Ga0207664_10000003 Ga0207664_1000000383 208
102 3300025949 Ga0207667_10571573 Ga0207667_105715732 208
103 3300026116 Ga0207674_10997145 Ga0207674_109971451 208
104 3300028794 Ga0307515_10000106 Ga0307515_1000010633 208
105 3300030521 Ga0307511_10041755 Ga0307511_100417554 208
106 3300030522 Ga0307512_10111609 Ga0307512_101116092 208
107 3300031507 Ga0307509_10030429 Ga0307509_100304293 208
108 3300031616 Ga0307508_10002509 Ga0307508_1000250913 208
109 3300031616 Ga0307508_10076984 Ga0307508_100769843 208
110 3300031649 Ga0307514_10003580 Ga0307514_100035808 208
111 3300031730 Ga0307516_10012404 Ga0307516_100124047 208
112 3300031730 Ga0307516_10160491 Ga0307516_101604911 208
113 3300031838 Ga0307518_10140908 Ga0307518_101409083 208
114 3300033179 Ga0307507_10004015 Ga0307507_1000401519 208
115 3300033179 Ga0307507_10018760 Ga0307507_100187605 208
116 3300033180 Ga0307510_10118538 Ga0307510_101185382 208
117 3300037466 Ga0395898_0127600 Ga0395898_0127600_549_1178 208
118 3300041494 Ga0451837_0184306 Ga0451837_0184306_124_750 208
119 3300042002 Ga0439442_002211 Ga0439442_002211_1442_2071 208
120 3300042007 Ga0439449_0000204 Ga0439449_0000204_14097_14756 208
121 3300042007 Ga0439449_0052718 Ga0439449_0052718_851_1480 208
122 3300044656 Ga0466969_0066887 Ga0466969_0066887_700_1332 208
123 3300044658 Ga0466972_0012741 Ga0466972_0012741_2688_3317 208
124 3300044658 Ga0466972_0054256 Ga0466972_0054256_857_1486 208
125 3300044683 Ga0466965_0005227 Ga0466965_0005227_3261_3893 208
126 3300044683 Ga0466965_0012830 Ga0466965_0012830_1406_2035 208
127 3300044684 Ga0466966_0001137 Ga0466966_0001137_11484_12116 208
128 3300044693 Ga0466961_0001159 Ga0466961_0001159_5378_6010 208
129 3300044693 Ga0466961_0032644 Ga0466961_0032644_296_925 208
130 3300044694 Ga0466963_0000020 Ga0466963_0000020_12050_12682 208
131 3300044694 Ga0466963_0073102 Ga0466963_0073102_1369_1995 208
132 3300044706 Ga0466964_0002995 Ga0466964_0002995_5377_6009 208
133 3300044719 Ga0466971_0000761 Ga0466971_0000761_11953_12585 208
134 3300044765 Ga0466970_0000323 Ga0466970_0000323_18880_19512 208
135 3300044842 Ga0466957_0000391 Ga0466957_0000391_13250_13882 208
136 3300044901 Ga0466960_0007666 Ga0466960_0007666_2361_2990 208
137 3300045049 Ga0466959_0000749 Ga0466959_0000749_3566_4198 208
138 3300045836 Ga0466958_0219534 Ga0466958_0219534_342_974 208
139 3300045976 Ga0466967_0000228 Ga0466967_0000228_14959_15591 208
140 3300045976 Ga0466967_0079333 Ga0466967_0079333_192_818 208
141 3300045976 Ga0466967_0094502 Ga0466967_0094502_1950_2582 208
142 3300045976 Ga0466967_0763061 Ga0466967_0763061_175_801 208
143 3300046454 Ga0495592_0007019 Ga0495592_0007019_1782_2411 208
144 3300046455 Ga0495603_0021426 Ga0495603_0021426_1928_2554 208
145 3300046455 Ga0495603_0029645 Ga0495603_0029645_2017_2646 208
146 3300046455 Ga0495603_0038444 Ga0495603_0038444_694_1323 208
147 3300046457 Ga0495590_0030232 Ga0495590_0030232_932_1558 208
148 3300046459 Ga0495629_0003831 Ga0495629_0003831_8536_9165 208
149 3300046459 Ga0495629_0011908 Ga0495629_0011908_2806_3435 208
150 3300046459 Ga0495629_0048840 Ga0495629_0048840_1371_1997 208
151 3300046460 Ga0495638_0074014 Ga0495638_0074014_1181_1810 208
152 3300046460 Ga0495638_0119545 Ga0495638_0119545_780_1406 208
153 3300046462 Ga0495651_0004526 Ga0495651_0004526_8100_8729 208
154 3300046462 Ga0495651_0081759 Ga0495651_0081759_702_1328 208
155 3300046474 Ga0495605_0006610 Ga0495605_0006610_2246_2872 208
156 3300046476 Ga0495662_0102461 Ga0495662_0102461_36_665 208
157 3300046477 Ga0495664_0000080 Ga0495664_0000080_6684_7313 208
158 3300046492 Ga0495585_0311882 Ga0495585_0311882_74_703 208
159 3300046499 Ga0495594_0041227 Ga0495594_0041227_1577_2206 208
160 3300046499 Ga0495594_0223568 Ga0495594_0223568_378_1004 208
161 3300046500 Ga0495596_0042146 Ga0495596_0042146_556_1182 208
162 3300046506 Ga0495583_0006788 Ga0495583_0006788_3504_4130 208
163 3300046506 Ga0495583_0144013 Ga0495583_0144013_238_867 208
164 3300046507 Ga0495606_0068172 Ga0495606_0068172_401_1027 208
165 3300046512 Ga0495610_0020294 Ga0495610_0020294_1701_2327 208
166 3300046515 Ga0495620_0005800 Ga0495620_0005800_3741_4367 208
167 3300046515 Ga0495620_0014166 Ga0495620_0014166_1468_2094 208
168 3300046516 Ga0495628_0112107 Ga0495628_0112107_79_708 208
169 3300046516 Ga0495628_0383932 Ga0495628_0383932_22_648 208
170 3300046518 Ga0495631_0003381 Ga0495631_0003381_5232_5858 208
171 3300046518 Ga0495631_0067782 Ga0495631_0067782_25_654 208
172 3300046522 Ga0495643_0176567 Ga0495643_0176567_256_882 208
173 3300046523 Ga0495644_0069648 Ga0495644_0069648_610_1236 208
174 3300046529 Ga0495652_0055665 Ga0495652_0055665_2585_3214 208
175 3300046529 Ga0495652_0056809 Ga0495652_0056809_361_987 208
176 3300046533 Ga0495640_0014103 Ga0495640_0014103_5347_5973 208
177 3300046535 Ga0495586_0100202 Ga0495586_0100202_461_1090 208
178 3300046535 Ga0495586_0225411 Ga0495586_0225411_259_885 208
179 3300046536 Ga0495587_0000196 Ga0495587_0000196_6702_7331 208
180 3300046543 Ga0495645_0009663 Ga0495645_0009663_5646_6275 208
181 3300046557 Ga0495622_0015712 Ga0495622_0015712_156_782 208
182 3300046559 Ga0495667_0335003 Ga0495667_0335003_85_714 208
183 3300046559 Ga0495667_0356135 Ga0495667_0356135_230_856 208
184 3300046615 Ga0495656_0392499 Ga0495656_0392499_61_690 208
185 3300046616 Ga0495668_0025622 Ga0495668_0025622_887_1513 208
186 3300046616 Ga0495668_0058990 Ga0495668_0058990_198_824 208
187 3300046642 Ga0495634_0044033 Ga0495634_0044033_1906_2535 208
188 3300046642 Ga0495634_0227315 Ga0495634_0227315_347_973 208
189 3300046648 Ga0495611_0025542 Ga0495611_0025542_708_1337 208
190 3300046648 Ga0495611_0026032 Ga0495611_0026032_1015_1644 208
191 3300046660 Ga0495625_0063625 Ga0495625_0063625_1475_2104 208
192 3300046660 Ga0495625_0089722 Ga0495625_0089722_1304_1930 208
193 3300046663 Ga0495635_0000275 Ga0495635_0000275_6832_7461 208
194 3300046665 Ga0495661_0070784 Ga0495661_0070784_831_1457 208
195 3300046675 Ga0495657_0002849 Ga0495657_0002849_7233_7862 208
196 3300046675 Ga0495657_0107700 Ga0495657_0107700_734_1360 208
197 3300046679 Ga0495623_0107937 Ga0495623_0107937_10_636 208
198 3300046680 Ga0495646_0000335 Ga0495646_0000335_14236_14865 208
199 3300046683 Ga0495658_0208758 Ga0495658_0208758_532_1161 208
200 3300046689 Ga0495613_0001012 Ga0495613_0001012_20703_21332 208
201 3300046689 Ga0495613_0178887 Ga0495613_0178887_376_1002 208
202 3300046690 Ga0495624_0051275 Ga0495624_0051275_1962_2588 208
203 3300046690 Ga0495624_0318709 Ga0495624_0318709_280_906 208
204 3300046692 Ga0495671_0017442 Ga0495671_0017442_1186_1815 208
205 3300046794 Ga0495589_0002777 Ga0495589_0002777_6783_7412 208
206 3300046794 Ga0495589_0019425 Ga0495589_0019425_816_1442 208
207 3300046794 Ga0495589_0023078 Ga0495589_0023078_910_1536 208
208 3300046794 Ga0495589_0037488 Ga0495589_0037488_16_645 208
209 3300046794 Ga0495589_0082051 Ga0495589_0082051_534_1160 208
210 3300046809 Ga0495600_0002576 Ga0495600_0002576_6418_7047 208
211 3300046809 Ga0495600_0089357 Ga0495600_0089357_1087_1713 208
212 3300046809 Ga0495600_0118822 Ga0495600_0118822_83_709 208
213 3300046810 Ga0495660_0015462 Ga0495660_0015462_3033_3659 208
214 3300047315 Ga0495581_0003867 Ga0495581_0003867_4771_5400 208
215 3300047315 Ga0495581_0061613 Ga0495581_0061613_44_670 208
216 3300047317 Ga0495604_0020531 Ga0495604_0020531_2102_2731 208
217 3300047317 Ga0495604_0112842 Ga0495604_0112842_87_713 208
218 3300047317 Ga0495604_0159437 Ga0495604_0159437_837_1463 208
219 3300047318 Ga0495636_0005593 Ga0495636_0005593_2633_3259 208
220 3300047318 Ga0495636_0049496 Ga0495636_0049496_709_1335 208
221 3300047318 Ga0495636_0097176 Ga0495636_0097176_586_1215 208
222 3300047319 Ga0495674_0325896 Ga0495674_0325896_546_1172 208
223 3300047320 Ga0495672_0318678 Ga0495672_0318678_22_648 208
224 3300047321 Ga0495676_0005891 Ga0495676_0005891_1054_1683 208
225 3300047321 Ga0495676_0013977 Ga0495676_0013977_4976_5602 208
226 3300047321 Ga0495676_0015659 Ga0495676_0015659_93_719 208
227 3300047321 Ga0495676_0028357 Ga0495676_0028357_1728_2357 208
228 3300047321 Ga0495676_0070795 Ga0495676_0070795_768_1397 208
229 3300047322 Ga0495680_0019518 Ga0495680_0019518_2171_2797 208
230 3300047443 Ga0495687_008597 Ga0495687_008597_4357_4983 208
231 3300047443 Ga0495687_058808 Ga0495687_058808_821_1447 208
232 3300047444 Ga0495675_0020695 Ga0495675_0020695_336_965 208
233 3300047447 Ga0495685_003978 Ga0495685_003978_3521_4147 208
234 3300047447 Ga0495685_019224 Ga0495685_019224_137_763 208
235 3300047447 Ga0495685_046330 Ga0495685_046330_784_1410 208
236 3300047447 Ga0495685_052544 Ga0495685_052544_290_916 208
237 3300047470 Ga0495681_0006520 Ga0495681_0006520_2896_3525 208
238 3300047472 Ga0495686_0112876 Ga0495686_0112876_947_1573 208
239 3300047673 Ga0495593_0000801 Ga0495593_0000801_13385_14014 208
240 3300048088 Ga0495602_0120000 Ga0495602_0120000_61_690 208
241 3300048089 Ga0495614_0000107 Ga0495614_0000107_62_691 208
242 3300048089 Ga0495614_0014256 Ga0495614_0014256_2053_2682 208
243 3300048089 Ga0495614_0020076 Ga0495614_0020076_1819_2445 208
244 3300049568 Ga0501031_0059641 Ga0501031_0059641_859_1488 208
245 3300049570 Ga0501033_0000856 Ga0501033_0000856_9436_10065 208
246 3300049570 Ga0501033_0009117 Ga0501033_0009117_4278_4910 208
247 3300049570 Ga0501033_0068783 Ga0501033_0068783_1899_2528 208
248 3300049571 Ga0501034_0036326 Ga0501034_0036326_2483_3109 208
249 3300049571 Ga0501034_0050440 Ga0501034_0050440_2634_3266 208
250 3300049571 Ga0501034_0205050 Ga0501034_0205050_502_1134 208
251 3300049572 Ga0501036_0000666 Ga0501036_0000666_19892_20524 208
252 3300049572 Ga0501036_0006001 Ga0501036_0006001_8731_9363 208
253 3300049573 Ga0501037_0074429 Ga0501037_0074429_1163_1792 208
254 3300049573 Ga0501037_0124256 Ga0501037_0124256_107_733 208
255 3300049574 Ga0501038_0004237 Ga0501038_0004237_9233_9862 208
256 3300049575 Ga0501039_0060163 Ga0501039_0060163_59_691 208
257 3300049578 Ga0501042_0763776 Ga0501042_0763776_12_644 208
258 3300049579 Ga0501043_0011612 Ga0501043_0011612_3784_4413 208
259 3300049579 Ga0501043_0025412 Ga0501043_0025412_3378_4010 208
260 3300049580 Ga0501046_0229797 Ga0501046_0229797_727_1356 208
261 3300049581 Ga0501047_0018004 Ga0501047_0018004_621_1253 208
262 3300049581 Ga0501047_0077624 Ga0501047_0077624_219_845 208
263 3300049581 Ga0501047_0278191 Ga0501047_0278191_789_1424 208
264 3300049582 Ga0501048_0008453 Ga0501048_0008453_2472_3101 208
265 3300049585 Ga0501069_0310048 Ga0501069_0310048_137_769 208
266 3300049586 Ga0501070_0000250 Ga0501070_0000250_3361_3993 208
267 3300049586 Ga0501070_0027511 Ga0501070_0027511_1953_2582 208
268 3300049586 Ga0501070_0539115 Ga0501070_0539115_64_690 208
269 3300049590 Ga0501074_0107483 Ga0501074_0107483_432_1064 208
270 3300049822 Ga0501035_0002640 Ga0501035_0002640_11716_12348 208
271 3300049822 Ga0501035_0027467 Ga0501035_0027467_3855_4484 208
272 3300049823 Ga0501044_0012429 Ga0501044_0012429_6191_6820 208
273 3300049823 Ga0501044_0041984 Ga0501044_0041984_1169_1798 208
274 3300050494 nmdc:mga06z11_9205_c1 nmdc:mga06z11_9205_c1_315_941 208
275 3300053078 Ga0495612_0042234 Ga0495612_0042234_844_1473 208
276 3300053095 Ga0500640_027501 Ga0500640_027501_26_655 208
277 3300053106 Ga0500558_176646 Ga0500558_176646_62_691 208
278 3300053107 Ga0500560_009507 Ga0500560_009507_1729_2358 208
279 3300053111 Ga0500572_021435 Ga0500572_021435_554_1183 208
280 3300053122 Ga0500608_240954 Ga0500608_240954_17_646 208
281 3300053140 Ga0500573_0167202 Ga0500573_0167202_11_640 208
282 3300053160 Ga0500633_0124494 Ga0500633_0124494_259_888 208
283 3300061719 Ga0466962_0055469 Ga0466962_0055469_44_673 208
284 iso_pu_bacteria 2811994917 2812477171 208
285 iso_pu_bacteria 3006486233 3006488144 208
286 iso_pu_bacteria 8048127548 8048135806 208

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13532

2OG-FeII_Oxy_2

2OG-Fe(II) oxygenase superfamily

51

218

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rzl-assembly2.cif.gz_D duplex interrogation by a direct dna repair protein in the search of damage 0.8332 24 208
3btz-assembly1.cif.gz_A crystal structure of human abh2 cross-linked to dsdna 0.8246 25 204
3buc-assembly1.cif.gz_A x-ray structure of human abh2 bound to dsdna with mn(ii) and 2kg 0.8221 24 208
6xwv-assembly1.cif.gz_C crystal structure of drosophila melanogaster cenp-c bound to cal1 0.8206 112 203
3rzl-assembly1.cif.gz_A duplex interrogation by a direct dna repair protein in the search of damage 0.8195 22 208
ID Description Score Start End Superfamily
af_L7N6A4_38_203_2.60.120.590 Mainly Beta;Sandwich;Jelly Rolls;Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.98 44 205 2.60.120.590
af_L7N6A4_38_203_2.60.120.590 Mainly Beta;Sandwich;Jelly Rolls;Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.9511 44 205 2.60.120.590
af_Q9FLT3_18_198_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8226 111 203 2.60.120.10
3rzlA00 Mainly Beta;Sandwich;Jelly Rolls;Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.8195 22 208 2.60.120.590
af_Q9VHP9_1291_1411_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8135 112 203 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A1M4EIB5-F1-model_v4 Alkylated DNA repair protein AlkB 0.9813 15 208 GO:0006307
GO:0051213
AF-A0A1U1W8Z7-F1-model_v4 deleted 0.9793 90 208
AF-A0A0F4J0V1-F1-model_v4 deleted 0.9762 15 208
AF-A0A6B1PJ62-F1-model_v4 deleted 0.9753 39 117
AF-A0A6B3GUW1-F1-model_v4 Alpha-ketoglutarate-dependent dioxygenase AlkB 0.975 49 208 GO:0006307
GO:0051213

Feature Viewer

pLDDT pTM Quality
91.09 0.87 High
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Predicted Structure (AlphaFold2)

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