F387658

General Info

Members Datasets Scaffolds Average Seq Length
286 194 572 249

Family's Representative Sequence

Representative Sequence 3300048924|Ga0496121_0007501|Ga0496121_0007501_11999_12871
Length 283
Sequence MPVSRHGREARVSARLWPSGGRASAAQSHDRGHLVYAAAGVLTVHTERGTSIVPANRVAWTPAGFTHHHRAHGDTDMRIVFLAPSLARLVPDHPAVFLTSPLAREVLLALTGPDNYDGATPRRGPAAQARLLRVLVDELHEAHEQPLRLPEPRDDRLRAIARTLDADPADNASLAQLGKAIGAGARTLSRLFHDELGMTFHEWRTQLRIHHALLLLADGHDVTQTAYACGWANPSSFIAAFTNVMGTTPGRYRTTSPRELAPGRRADSNRCPVHQERSTGRVR

Samples

Sample ID Description Type Environment
1 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
2 3300002073 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
64 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
65 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
106 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
107 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
110 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
116 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
123 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
126 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
127 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
128 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
129 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
130 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
131 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
132 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
136 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
163 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
174 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
175 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
176 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
177 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
178 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
179 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
180 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
184 2508501039 Frankia saprophytica CN3 Isolate Nodule
185 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
186 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
187 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
188 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
189 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
190 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
191 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
192 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
193 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
194 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.8
Metatranscriptomes 0.35
Isolates 3.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.15
Nodule 0.7
Rhizoplane 4.2
Rhizosphere 83.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496121_0007501 3300048924 Bacteria 13162
2 JGI24745J21846_1007688 3300002073 Bacteria 1208
3 Ga0070658_10049916 3300005327 Bacteria 3391
4 Ga0070676_10216916 3300005328 Bacteria 1262
5 Ga0070683_100013894 3300005329 Bacteria 7033
6 Ga0070683_100121589 3300005329 Bacteria 2467
7 Ga0070683_100178053 3300005329 Bacteria 2018
8 Ga0070683_100211717 3300005329 Bacteria 1841
9 Ga0070670_100203347 3300005331 Bacteria 1721
10 Ga0068869_100352797 3300005334 Bacteria 1199
11 Ga0068868_100006272 3300005338 Bacteria 8411
12 Ga0068868_100380083 3300005338 Bacteria 1215
13 Ga0070660_100095754 3300005339 Bacteria 2347
14 Ga0070660_100104796 3300005339 Bacteria 2244
15 Ga0070660_100302809 3300005339 Bacteria 1311
16 Ga0070691_10172391 3300005341 Bacteria 1122
17 Ga0070661_100046993 3300005344 Bacteria 3158
18 Ga0070668_100062468 3300005347 Bacteria 2886
19 Ga0070668_100275457 3300005347 Bacteria 1404
20 Ga0070675_100091523 3300005354 Bacteria 2548
21 Ga0070659_100191853 3300005366 Bacteria 1679
22 Ga0070667_100004010 3300005367 Bacteria 12466
23 Ga0070709_10139019 3300005434 Bacteria 1667
24 Ga0070714_100005557 3300005435 Bacteria 9624
25 Ga0070714_100029044 3300005435 Bacteria 4594
26 Ga0070714_100495755 3300005435 Bacteria 1164
27 Ga0070713_100117109 3300005436 Bacteria 2331
28 Ga0070713_100120649 3300005436 Bacteria 2299
29 Ga0070713_100224991 3300005436 Bacteria 1703
30 Ga0070713_100293011 3300005436 Bacteria 1496
31 Ga0070663_100000853 3300005455 Bacteria 16515
32 Ga0070678_100122657 3300005456 Bacteria 2051
33 Ga0070678_100206778 3300005456 Bacteria 1624
34 Ga0070681_10354766 3300005458 Bacteria 1377
35 Ga0070685_10023913 3300005466 Bacteria 3350
36 Ga0070684_100051338 3300005535 Bacteria 3582
37 Ga0070684_100081522 3300005535 Bacteria 2863
38 Ga0068853_100048872 3300005539 Bacteria 3634
39 Ga0068853_100075204 3300005539 Bacteria 2948
40 Ga0068853_100164823 3300005539 Bacteria 2002
41 Ga0070665_100004848 3300005548 Bacteria 13978
42 Ga0070665_100455628 3300005548 Bacteria 1289
43 Ga0068855_100023754 3300005563 Bacteria 7343
44 Ga0068855_100411262 3300005563 Bacteria 1481
45 Ga0068857_100151319 3300005577 Bacteria 2102
46 Ga0068857_100280338 3300005577 Bacteria 1533
47 Ga0068854_100032123 3300005578 Bacteria 3651
48 Ga0068854_100089382 3300005578 Bacteria 2289
49 Ga0068856_100059203 3300005614 Bacteria 3783
50 Ga0068856_100249879 3300005614 Bacteria 1789
51 Ga0068852_100042441 3300005616 Bacteria 3850
52 Ga0068861_100012415 3300005719 Bacteria 5941
53 Ga0068870_10178317 3300005840 Bacteria 1273
54 Ga0068858_100025146 3300005842 Bacteria 5541
55 Ga0068860_100015962 3300005843 Bacteria 7330
56 Ga0068862_100053172 3300005844 Bacteria 3466
57 Ga0081540_1014971 3300005983 Bacteria 4931
58 Ga0075365_10029223 3300006038 Bacteria 3521
59 Ga0070716_100113275 3300006173 Bacteria 1685
60 Ga0070712_100033646 3300006175 Bacteria 3470
61 Ga0070712_100247516 3300006175 Bacteria 1422
62 Ga0075431_100045116 3300006847 Bacteria 4545
63 Ga0068865_100209819 3300006881 Bacteria 1517
64 Ga0068865_100375529 3300006881 Bacteria 1158
65 Ga0105240_10028562 3300009093 Bacteria 7283
66 Ga0105245_10005616 3300009098 Bacteria 11017
67 Ga0114129_10512609 3300009147 Bacteria 1565
68 Ga0105243_10565055 3300009148 Bacteria 1089
69 Ga0105241_10003515 3300009174 Bacteria 11656
70 Ga0105242_10060866 3300009176 Bacteria 3104
71 Ga0105242_10956298 3300009176 Bacteria 861
72 Ga0105248_10022394 3300009177 Bacteria 7009
73 Ga0105248_10682976 3300009177 Bacteria 1158
74 Ga0105237_10398556 3300009545 Bacteria 1381
75 Ga0105238_10143668 3300009551 Bacteria 2363
76 Ga0105238_10203422 3300009551 Bacteria 1956
77 Ga0105249_10187952 3300009553 Bacteria 2014
78 Ga0105239_10000861 3300010375 Bacteria 43090
79 Ga0105239_10403632 3300010375 Bacteria 1547
80 Ga0105239_10414587 3300010375 Bacteria 1525
81 Ga0105239_11051573 3300010375 Bacteria 937
82 Ga0105246_10015013 3300011119 Bacteria 4880
83 Ga0157371_10320169 3300013102 Bacteria 1125
84 Ga0157369_10331651 3300013105 Bacteria 1581
85 Ga0157369_10937316 3300013105 Bacteria 887
86 Ga0157374_11032007 3300013296 Bacteria 842
87 Ga0163162_10017701 3300013306 Bacteria 6974
88 Ga0157375_10103889 3300013308 Bacteria 2929
89 Ga0157375_10142802 3300013308 Bacteria 2522
90 Ga0163163_10241287 3300014325 Bacteria 1857
91 Ga0157379_10012297 3300014968 Bacteria 7476
92 Ga0157376_10746474 3300014969 Bacteria 987
93 Ga0163161_10245699 3300017792 Bacteria 1393
94 Ga0213875_10002018 3300021388 Bacteria 12521
95 Ga0213875_10039877 3300021388 Bacteria 2211
96 Ga0209758_1003174 3300025297 Bacteria 15415
97 Ga0207692_10004890 3300025898 Bacteria 5337
98 Ga0207688_10000304 3300025901 Bacteria 22575
99 Ga0207680_10004171 3300025903 Bacteria 6843
100 Ga0207647_10040155 3300025904 Bacteria 2948
101 Ga0207699_10031182 3300025906 Bacteria 2991
102 Ga0207699_10087350 3300025906 Bacteria 1949
103 Ga0207645_10104544 3300025907 Bacteria 1829
104 Ga0207707_10558409 3300025912 Bacteria 972
105 Ga0207671_10161646 3300025914 Bacteria 1735
106 Ga0207693_10049575 3300025915 Bacteria 3297
107 Ga0207657_10087208 3300025919 Bacteria 2611
108 Ga0207657_10099298 3300025919 Bacteria 2418
109 Ga0207649_10173858 3300025920 Bacteria 1502
110 Ga0207694_10120523 3300025924 Bacteria 2094
111 Ga0207687_10019589 3300025927 Bacteria 4484
112 Ga0207700_10130728 3300025928 Bacteria 2050
113 Ga0207664_10009242 3300025929 Bacteria 6907
114 Ga0207664_10032167 3300025929 Bacteria 4019
115 Ga0207664_10067855 3300025929 Bacteria 2863
116 Ga0207690_10373561 3300025932 Bacteria 1131
117 Ga0207686_10204081 3300025934 Bacteria 1417
118 Ga0207704_10047123 3300025938 Bacteria 2574
119 Ga0207704_10155212 3300025938 Bacteria 1621
120 Ga0207704_10425287 3300025938 Bacteria 1054
121 Ga0207665_10006169 3300025939 Bacteria 7958
122 Ga0207689_10021245 3300025942 Bacteria 5457
123 Ga0207661_10155292 3300025944 Bacteria 1981
124 Ga0207679_10192305 3300025945 Bacteria 1698
125 Ga0207667_10604003 3300025949 Bacteria 1106
126 Ga0207712_10065860 3300025961 Bacteria 2588
127 Ga0207668_10609889 3300025972 Bacteria 951
128 Ga0207640_10067075 3300025981 Bacteria 2399
129 Ga0207658_10002387 3300025986 Bacteria 13766
130 Ga0207677_10014793 3300026023 Bacteria 4569
131 Ga0207677_10205919 3300026023 Bacteria 1567
132 Ga0207703_10396082 3300026035 Bacteria 1280
133 Ga0207678_10004901 3300026067 Bacteria 12024
134 Ga0207708_10167079 3300026075 Bacteria 1740
135 Ga0207702_10235939 3300026078 Bacteria 1711
136 Ga0207702_10550557 3300026078 Bacteria 1128
137 Ga0207676_10081056 3300026095 Bacteria 2636
138 Ga0207674_10005696 3300026116 Bacteria 14775
139 Ga0207674_10021403 3300026116 Bacteria 6962
140 Ga0207674_10182160 3300026116 Bacteria 2052
141 Ga0207675_100006213 3300026118 Bacteria 11342
142 Ga0207675_100233163 3300026118 Bacteria 1776
143 Ga0207683_10023782 3300026121 Bacteria 5271
144 Ga0207683_10215245 3300026121 Bacteria 1750
145 Ga0207698_10045356 3300026142 Bacteria 3311
146 Ga0207698_10127831 3300026142 Bacteria 2165
147 Ga0207698_10227292 3300026142 Bacteria 1691
148 Ga0268266_10000503 3300028379 Bacteria 55789
149 Ga0268266_10010079 3300028379 Bacteria 8286
150 Ga0268266_10615304 3300028379 Bacteria 1044
151 Ga0268265_10141885 3300028380 Bacteria 2012
152 Ga0268264_10201236 3300028381 Bacteria 1822
153 Ga0307517_10015170 3300028786 Bacteria 10261
154 Ga0307515_10048253 3300028794 Bacteria 6443
155 Ga0307515_10059700 3300028794 Bacteria 5459
156 Ga0307512_10007094 3300030522 Bacteria 11162
157 Ga0307512_10056931 3300030522 Bacteria 3064
158 Ga0307513_10141189 3300031456 Bacteria 2334
159 Ga0307509_10019383 3300031507 Bacteria 7760
160 Ga0307508_10159735 3300031616 Bacteria 1857
161 Ga0307516_10048115 3300031730 Bacteria 4197
162 Ga0307516_10089779 3300031730 Bacteria 2903
163 Ga0372808_012184 3300036459 Bacteria 1219
164 Ga0373925_0000014 3300037068 Bacteria 180414
165 Ga0395898_0956438 3300037466 Bacteria 793
166 Ga0466961_0001727 3300044693 Bacteria 13590
167 Ga0466971_0018461 3300044719 Bacteria 3089
168 Ga0466960_0068231 3300044901 Bacteria 1763
169 Ga0466959_0000182 3300045049 Bacteria 41499
170 Ga0466959_0042501 3300045049 Bacteria 3352
171 Ga0466958_0092325 3300045836 Bacteria 1874
172 Ga0495603_0093906 3300046455 Bacteria 1753
173 Ga0495638_0078901 3300046460 Bacteria 2003
174 Ga0495664_0006884 3300046477 Bacteria 6293
175 Ga0495608_0110925 3300046511 Bacteria 1764
176 Ga0495643_0026671 3300046522 Bacteria 3256
177 Ga0495661_0177773 3300046665 Bacteria 1130
178 Ga0495670_0010665 3300046691 Bacteria 4517
179 Ga0495683_0099473 3300047323 Bacteria 1400
180 Ga0495687_011676 3300047443 Bacteria 4702
181 Ga0495685_008272 3300047447 Bacteria 3449
182 Ga0495681_0008249 3300047470 Bacteria 6547
183 Ga0496100_0264378 3300048903 Bacteria 1277
184 Ga0496103_0072010 3300048906 Bacteria 2164
185 Ga0496107_0163411 3300048910 Bacteria 1651
186 Ga0496108_0017032 3300048911 Bacteria 5941
187 Ga0496109_0020751 3300048912 Bacteria 5803
188 Ga0496110_0014978 3300048913 Bacteria 6447
189 Ga0496110_0609902 3300048913 Bacteria 990
190 Ga0496111_0468354 3300048914 Bacteria 929
191 Ga0496112_0134149 3300048915 Bacteria 2446
192 Ga0496112_0152716 3300048915 Bacteria 2276
193 Ga0496114_0183515 3300048917 Bacteria 1828
194 Ga0496114_0326535 3300048917 Bacteria 1356
195 Ga0496126_0026389 3300048929 Bacteria 5570
196 Ga0496126_0201479 3300048929 Bacteria 1680
197 Ga0496126_0453975 3300048929 Bacteria 1031
198 Ga0501031_0003529 3300049568 Bacteria 10038
199 Ga0501032_0006366 3300049569 Bacteria 8702
200 Ga0501032_0025795 3300049569 Bacteria 4049
201 Ga0501032_0152760 3300049569 Bacteria 1518
202 Ga0501033_0000714 3300049570 Bacteria 30480
203 Ga0501034_0002520 3300049571 Bacteria 21955
204 Ga0501034_0006870 3300049571 Bacteria 12167
205 Ga0501034_0165069 3300049571 Bacteria 2183
206 Ga0501036_0005945 3300049572 Bacteria 9889
207 Ga0501036_0087443 3300049572 Bacteria 2634
208 Ga0501037_0004508 3300049573 Bacteria 10122
209 Ga0501037_0052785 3300049573 Bacteria 2972
210 Ga0501037_0086645 3300049573 Bacteria 2267
211 Ga0501038_0000681 3300049574 Bacteria 30246
212 Ga0501038_0000973 3300049574 Bacteria 25695
213 Ga0501038_0407508 3300049574 Bacteria 1051
214 Ga0501039_0058539 3300049575 Bacteria 2984
215 Ga0501040_0026913 3300049576 Bacteria 3869
216 Ga0501041_0006276 3300049577 Bacteria 6955
217 Ga0501042_0118902 3300049578 Bacteria 1902
218 Ga0501043_0005753 3300049579 Bacteria 9988
219 Ga0501043_0042502 3300049579 Bacteria 3572
220 Ga0501043_0057505 3300049579 Bacteria 3053
221 Ga0501046_0006461 3300049580 Bacteria 10370
222 Ga0501046_0017189 3300049580 Bacteria 6044
223 Ga0501047_0000063 3300049581 Bacteria 136761
224 Ga0501047_0009477 3300049581 Bacteria 9199
225 Ga0501047_0012703 3300049581 Bacteria 7978
226 Ga0501047_0102693 3300049581 Bacteria 2738
227 Ga0501048_0000390 3300049582 Bacteria 30459
228 Ga0501048_0047777 3300049582 Bacteria 3053
229 Ga0501067_0000677 3300049583 Bacteria 18344
230 Ga0501068_0002288 3300049584 Bacteria 10200
231 Ga0501068_0071601 3300049584 Bacteria 2116
232 Ga0501069_0016677 3300049585 Bacteria 3947
233 Ga0501070_0001914 3300049586 Bacteria 18377
234 Ga0501070_0051609 3300049586 Bacteria 3413
235 Ga0501070_0054580 3300049586 Bacteria 3313
236 Ga0501071_0001913 3300049587 Bacteria 12389
237 Ga0501072_0007264 3300049588 Bacteria 8404
238 Ga0501072_0088877 3300049588 Bacteria 2452
239 Ga0501073_0015719 3300049589 Bacteria 5486
240 Ga0501074_0046418 3300049590 Bacteria 3141
241 Ga0501074_0055872 3300049590 Bacteria 2844
242 Ga0501074_0071681 3300049590 Bacteria 2490
243 Ga0501079_0010050 3300049741 Bacteria 7185
244 Ga0501079_0015592 3300049741 Bacteria 5802
245 Ga0501080_0028682 3300049742 Bacteria 5181
246 Ga0501080_0069307 3300049742 Bacteria 3280
247 Ga0501080_0082568 3300049742 Bacteria 2984
248 Ga0501083_0002684 3300049744 Bacteria 12258
249 Ga0501083_0004350 3300049744 Bacteria 9976
250 Ga0501035_0000963 3300049822 Bacteria 30420
251 Ga0501035_0120473 3300049822 Bacteria 2294
252 Ga0501035_0327628 3300049822 Bacteria 1285
253 Ga0501044_0001772 3300049823 Bacteria 25250
254 Ga0501044_0007877 3300049823 Bacteria 11710
255 Ga0501044_0009798 3300049823 Bacteria 10417
256 Ga0501044_0083932 3300049823 Bacteria 3220
257 Ga0501044_0265721 3300049823 Bacteria 1653
258 Ga0501045_0025262 3300049824 Bacteria 4269
259 Ga0501045_0071443 3300049824 Bacteria 2554
260 nmdc:mga0yw44_33477_c1 3300050492 Bacteria 3003
261 nmdc:mga0qj67_400832_c1 3300050509 Bacteria 1107
262 nmdc:mga06r32_40862_c1 3300050510 Bacteria 4405
263 nmdc:mga0n895_965527_c1 3300050512 Bacteria 835
264 Ga0495612_0028073 3300053078 Bacteria 2265
265 Ga0500569_030486 3300053109 Bacteria 1509
266 Ga0500652_011884 3300053131 Bacteria 3034
267 Ga0500561_0008363 3300053137 Bacteria 2058
268 Ga0500600_0016521 3300053149 Bacteria 4467
269 Ga0500616_0000672 3300053153 Bacteria 40160
270 Ga0500633_0005333 3300053160 Bacteria 3045
271 Ga0501084_0028896 3300054114 Bacteria 4636
272 Ga0501084_0175289 3300054114 Bacteria 1810
273 Ga0501082_0006796 3300060353 Bacteria 9886
274 Ga0501082_0009145 3300060353 Bacteria 8543
275 Ga0530510_0272146 3300061734 Bacteria 1264
276 2508673834 2508501039 Bacteria 9978592
277 2738696174 2738541272 Bacteria 6848551
278 2808846216 2808606359 Bacteria 9866990
279 2862182259 2862178590 Bacteria 8583590
280 2883823496 2883821847 Bacteria 5121194
281 2891555789 2891554331 Bacteria 8812224
282 2895443175 2895442618 Bacteria 11027144
283 2997603279 2997600082 Bacteria 9896405
284 3006326789 3006321560 Bacteria 8247479
285 3006396955 3006393351 Bacteria 6615579
286 8002786771 8002784119 Bacteria 9788632
287 Ga0496121_0007501
288 JGI24745J21846_1007688
289 Ga0070658_10049916
290 Ga0070676_10216916
291 Ga0070683_100013894
292 Ga0070683_100121589
293 Ga0070683_100178053
294 Ga0070683_100211717
295 Ga0070670_100203347
296 Ga0068869_100352797
297 Ga0068868_100006272
298 Ga0068868_100380083
299 Ga0070660_100095754
300 Ga0070660_100104796
301 Ga0070660_100302809
302 Ga0070691_10172391
303 Ga0070661_100046993
304 Ga0070668_100062468
305 Ga0070668_100275457
306 Ga0070675_100091523
307 Ga0070659_100191853
308 Ga0070667_100004010
309 Ga0070709_10139019
310 Ga0070714_100005557
311 Ga0070714_100029044
312 Ga0070714_100495755
313 Ga0070713_100117109
314 Ga0070713_100120649
315 Ga0070713_100224991
316 Ga0070713_100293011
317 Ga0070663_100000853
318 Ga0070678_100122657
319 Ga0070678_100206778
320 Ga0070681_10354766
321 Ga0070685_10023913
322 Ga0070684_100051338
323 Ga0070684_100081522
324 Ga0068853_100048872
325 Ga0068853_100075204
326 Ga0068853_100164823
327 Ga0070665_100004848
328 Ga0070665_100455628
329 Ga0068855_100023754
330 Ga0068855_100411262
331 Ga0068857_100151319
332 Ga0068857_100280338
333 Ga0068854_100032123
334 Ga0068854_100089382
335 Ga0068856_100059203
336 Ga0068856_100249879
337 Ga0068852_100042441
338 Ga0068861_100012415
339 Ga0068870_10178317
340 Ga0068858_100025146
341 Ga0068860_100015962
342 Ga0068862_100053172
343 Ga0081540_1014971
344 Ga0075365_10029223
345 Ga0070716_100113275
346 Ga0070712_100033646
347 Ga0070712_100247516
348 Ga0075431_100045116
349 Ga0068865_100209819
350 Ga0068865_100375529
351 Ga0105240_10028562
352 Ga0105245_10005616
353 Ga0114129_10512609
354 Ga0105243_10565055
355 Ga0105241_10003515
356 Ga0105242_10060866
357 Ga0105242_10956298
358 Ga0105248_10022394
359 Ga0105248_10682976
360 Ga0105237_10398556
361 Ga0105238_10143668
362 Ga0105238_10203422
363 Ga0105249_10187952
364 Ga0105239_10000861
365 Ga0105239_10403632
366 Ga0105239_10414587
367 Ga0105239_11051573
368 Ga0105246_10015013
369 Ga0157371_10320169
370 Ga0157369_10331651
371 Ga0157369_10937316
372 Ga0157374_11032007
373 Ga0163162_10017701
374 Ga0157375_10103889
375 Ga0157375_10142802
376 Ga0163163_10241287
377 Ga0157379_10012297
378 Ga0157376_10746474
379 Ga0163161_10245699
380 Ga0213875_10002018
381 Ga0213875_10039877
382 Ga0209758_1003174
383 Ga0207692_10004890
384 Ga0207688_10000304
385 Ga0207680_10004171
386 Ga0207647_10040155
387 Ga0207699_10031182
388 Ga0207699_10087350
389 Ga0207645_10104544
390 Ga0207707_10558409
391 Ga0207671_10161646
392 Ga0207693_10049575
393 Ga0207657_10087208
394 Ga0207657_10099298
395 Ga0207649_10173858
396 Ga0207694_10120523
397 Ga0207687_10019589
398 Ga0207700_10130728
399 Ga0207664_10009242
400 Ga0207664_10032167
401 Ga0207664_10067855
402 Ga0207690_10373561
403 Ga0207686_10204081
404 Ga0207704_10047123
405 Ga0207704_10155212
406 Ga0207704_10425287
407 Ga0207665_10006169
408 Ga0207689_10021245
409 Ga0207661_10155292
410 Ga0207679_10192305
411 Ga0207667_10604003
412 Ga0207712_10065860
413 Ga0207668_10609889
414 Ga0207640_10067075
415 Ga0207658_10002387
416 Ga0207677_10014793
417 Ga0207677_10205919
418 Ga0207703_10396082
419 Ga0207678_10004901
420 Ga0207708_10167079
421 Ga0207702_10235939
422 Ga0207702_10550557
423 Ga0207676_10081056
424 Ga0207674_10005696
425 Ga0207674_10021403
426 Ga0207674_10182160
427 Ga0207675_100006213
428 Ga0207675_100233163
429 Ga0207683_10023782
430 Ga0207683_10215245
431 Ga0207698_10045356
432 Ga0207698_10127831
433 Ga0207698_10227292
434 Ga0268266_10000503
435 Ga0268266_10010079
436 Ga0268266_10615304
437 Ga0268265_10141885
438 Ga0268264_10201236
439 Ga0307517_10015170
440 Ga0307515_10048253
441 Ga0307515_10059700
442 Ga0307512_10007094
443 Ga0307512_10056931
444 Ga0307513_10141189
445 Ga0307509_10019383
446 Ga0307508_10159735
447 Ga0307516_10048115
448 Ga0307516_10089779
449 Ga0372808_012184
450 Ga0373925_0000014
451 Ga0395898_0956438
452 Ga0466961_0001727
453 Ga0466971_0018461
454 Ga0466960_0068231
455 Ga0466959_0000182
456 Ga0466959_0042501
457 Ga0466958_0092325
458 Ga0495603_0093906
459 Ga0495638_0078901
460 Ga0495664_0006884
461 Ga0495608_0110925
462 Ga0495643_0026671
463 Ga0495661_0177773
464 Ga0495670_0010665
465 Ga0495683_0099473
466 Ga0495687_011676
467 Ga0495685_008272
468 Ga0495681_0008249
469 Ga0496100_0264378
470 Ga0496103_0072010
471 Ga0496107_0163411
472 Ga0496108_0017032
473 Ga0496109_0020751
474 Ga0496110_0014978
475 Ga0496110_0609902
476 Ga0496111_0468354
477 Ga0496112_0134149
478 Ga0496112_0152716
479 Ga0496114_0183515
480 Ga0496114_0326535
481 Ga0496126_0026389
482 Ga0496126_0201479
483 Ga0496126_0453975
484 Ga0501031_0003529
485 Ga0501032_0006366
486 Ga0501032_0025795
487 Ga0501032_0152760
488 Ga0501033_0000714
489 Ga0501034_0002520
490 Ga0501034_0006870
491 Ga0501034_0165069
492 Ga0501036_0005945
493 Ga0501036_0087443
494 Ga0501037_0004508
495 Ga0501037_0052785
496 Ga0501037_0086645
497 Ga0501038_0000681
498 Ga0501038_0000973
499 Ga0501038_0407508
500 Ga0501039_0058539
501 Ga0501040_0026913
502 Ga0501041_0006276
503 Ga0501042_0118902
504 Ga0501043_0005753
505 Ga0501043_0042502
506 Ga0501043_0057505
507 Ga0501046_0006461
508 Ga0501046_0017189
509 Ga0501047_0000063
510 Ga0501047_0009477
511 Ga0501047_0012703
512 Ga0501047_0102693
513 Ga0501048_0000390
514 Ga0501048_0047777
515 Ga0501067_0000677
516 Ga0501068_0002288
517 Ga0501068_0071601
518 Ga0501069_0016677
519 Ga0501070_0001914
520 Ga0501070_0051609
521 Ga0501070_0054580
522 Ga0501071_0001913
523 Ga0501072_0007264
524 Ga0501072_0088877
525 Ga0501073_0015719
526 Ga0501074_0046418
527 Ga0501074_0055872
528 Ga0501074_0071681
529 Ga0501079_0010050
530 Ga0501079_0015592
531 Ga0501080_0028682
532 Ga0501080_0069307
533 Ga0501080_0082568
534 Ga0501083_0002684
535 Ga0501083_0004350
536 Ga0501035_0000963
537 Ga0501035_0120473
538 Ga0501035_0327628
539 Ga0501044_0001772
540 Ga0501044_0007877
541 Ga0501044_0009798
542 Ga0501044_0083932
543 Ga0501044_0265721
544 Ga0501045_0025262
545 Ga0501045_0071443
546 nmdc:mga0yw44_33477_c1
547 nmdc:mga0qj67_400832_c1
548 nmdc:mga06r32_40862_c1
549 nmdc:mga0n895_965527_c1
550 Ga0495612_0028073
551 Ga0500569_030486
552 Ga0500652_011884
553 Ga0500561_0008363
554 Ga0500600_0016521
555 Ga0500616_0000672
556 Ga0500633_0005333
557 Ga0501084_0028896
558 Ga0501084_0175289
559 Ga0501082_0006796
560 Ga0501082_0009145
561 Ga0530510_0272146
562 2508673834
563 2738696174
564 2808846216
565 2862182259
566 2883823496
567 2891555789
568 2895443175
569 2997603279
570 3006326789
571 3006396955
572 8002786771

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

177

255

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yhf-assembly1.cif.gz_A crystal structure of conserved spy1581 protein of unknown function from streptococcus pyogenes 0.9158 15 78
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.9102 148 247
2i45-assembly3.cif.gz_E crystal structure of protein nmb1881 from neisseria meningitidis 0.8972 16 77
3fe5-assembly1.cif.gz_A crystal structure of 3-hydroxyanthranilate 3,4-dioxygenase from bovine kidney 0.8968 15 79
6o2k-assembly1.cif.gz_A drosophila melanogaster cenp-c cupin domain 0.894 14 76
ID Description Score Start End Superfamily
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9712 193 247 1.10.10.60
af_P96245_143_250_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.968 146 248 1.10.10.60
af_P76241_5_112_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9389 17 96 2.60.120.10
af_P96245_1_96_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9324 14 92 2.60.120.10
af_P09377_170_274_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9321 148 247 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A231HEW2-F1-model_v4 HTH-type transcriptional regulator NimR 0.9918 30 247 GO:0003700
GO:0043565
AF-A0A5N0E8P6-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9892 18 247 GO:0003700
GO:0043565
AF-A0A3D9ZBZ5-F1-model_v4 Helix-turn-helix protein 0.9851 11 247 GO:0003700
GO:0043565
AF-A0A1R1SGH5-F1-model_v4 Amidase domain-containing transcriptional regulator 0.9818 30 247 GO:0003700
GO:0043565
AF-D7C5F5-F1-model_v4 Amidase domain-containing transcriptional regulator 0.9803 37 247 GO:0003700
GO:0043565

Map