F386821

General Info

Members Datasets Scaffolds Average Seq Length
285 141 285 229

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10014297|Ga0213875_100142973
Length 261
Sequence VLCCGSRESTSNQAHRGYALNPLIIALDVDSSPGALKLVEQIGAGADFYKVGMELYAAAGMEIVSELNAQGKKVFLDLKLYDIGETVKRATRQICKSDAVTYLTIHGSGAIMKAAVEGRGNSETKLLAVTVLTSFDQEDLADLGYPVQLADLVELRVRKAVESGIDGVVCSPLEVARVRSLGGPNLKLVVPGVRSAGAATGDQKRVATPSQAIADGADHLVIGRQVTRAADPRAACEEILAEIMVPETSSVSRDANWASRN

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
61 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
64 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
98 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
99 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
100 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
101 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
102 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
121 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
122 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
127 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 89.47
Stem 0
Stem Tuber 0
Unclassified 10.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10013446 3300005327 Bacteria 6568
2 Ga0070658_10120548 3300005327 Unclassified 2179
3 Ga0070658_10149055 3300005327 Unclassified 1957
4 Ga0070658_10265090 3300005327 Bacteria 1460
5 Ga0070658_10644020 3300005327 Unclassified 919
6 Ga0070683_100000031 3300005329 Bacteria 150779
7 Ga0070683_100000834 3300005329 Bacteria 22848
8 Ga0068869_100279479 3300005334 Unclassified 1342
9 Ga0070666_10046091 3300005335 Bacteria 2924
10 Ga0070666_10648143 3300005335 Unclassified 772
11 Ga0070680_100009674 3300005336 Bacteria 7417
12 Ga0068868_100014086 3300005338 Bacteria 5887
13 Ga0068868_100162116 3300005338 Bacteria 1847
14 Ga0070660_100006658 3300005339 Bacteria 8018
15 Ga0070660_100065809 3300005339 Unclassified 2821
16 Ga0070689_100125157 3300005340 Bacteria 2056
17 Ga0070661_100060311 3300005344 Bacteria 2784
18 Ga0070671_100112032 3300005355 Unclassified 2292
19 Ga0070667_100092844 3300005367 Bacteria 2598
20 Ga0070714_100094831 3300005435 Unclassified 2620
21 Ga0070681_10000603 3300005458 Bacteria 29582
22 Ga0070681_10021363 3300005458 Bacteria 6490
23 Ga0068867_100025169 3300005459 Bacteria 4269
24 Ga0070699_100727765 3300005518 Unclassified 907
25 Ga0070679_100002388 3300005530 Bacteria 17025
26 Ga0070679_100317696 3300005530 Bacteria 1507
27 Ga0070679_100517421 3300005530 Bacteria 1137
28 Ga0070684_100001688 3300005535 Bacteria 16052
29 Ga0068853_100028342 3300005539 Unclassified 4710
30 Ga0068853_100209827 3300005539 Bacteria 1775
31 Ga0070695_100049950 3300005545 Bacteria 2679
32 Ga0070693_100073635 3300005547 Bacteria 2018
33 Ga0070665_100225344 3300005548 Bacteria 1875
34 Ga0068855_100018337 3300005563 Bacteria 8408
35 Ga0068855_100018526 3300005563 Bacteria 8371
36 Ga0068855_100052908 3300005563 Bacteria 4778
37 Ga0068855_100157242 3300005563 Bacteria 2582
38 Ga0068855_100187148 3300005563 Bacteria 2338
39 Ga0068855_100486857 3300005563 Unclassified 1342
40 Ga0068855_100516429 3300005563 Bacteria 1296
41 Ga0068857_100001898 3300005577 Bacteria 16837
42 Ga0068857_100003245 3300005577 Bacteria 13510
43 Ga0068857_100122236 3300005577 Bacteria 2345
44 Ga0068856_100007638 3300005614 Bacteria 10554
45 Ga0068856_100008857 3300005614 Bacteria 9791
46 Ga0068856_100052854 3300005614 Bacteria 4007
47 Ga0068856_100081819 3300005614 Unclassified 3204
48 Ga0068856_100459760 3300005614 Unclassified 1294
49 Ga0068852_100008568 3300005616 Bacteria 7543
50 Ga0068852_100108206 3300005616 Bacteria 2523
51 Ga0068852_100117262 3300005616 Bacteria 2431
52 Ga0068852_100235591 3300005616 Bacteria 1747
53 Ga0068852_100297500 3300005616 Unclassified 1561
54 Ga0068852_100838539 3300005616 Bacteria 934
55 Ga0068859_100093259 3300005617 Bacteria 3062
56 Ga0068859_100888764 3300005617 Bacteria 976
57 Ga0068864_100098309 3300005618 Unclassified 2592
58 Ga0068861_100177985 3300005719 Bacteria 1768
59 Ga0068851_10289568 3300005834 Unclassified 939
60 Ga0068858_100004704 3300005842 Bacteria 13375
61 Ga0068858_100123289 3300005842 Bacteria 2425
62 Ga0068860_100226419 3300005843 Unclassified 1816
63 Ga0081455_10084175 3300005937 Bacteria 2596
64 Ga0070712_100888433 3300006175 Bacteria 768
65 Ga0097621_100037831 3300006237 Bacteria 3870
66 Ga0068871_100005165 3300006358 Bacteria 9128
67 Ga0068871_100145482 3300006358 Bacteria 2017
68 Ga0075431_100032946 3300006847 Bacteria 5339
69 Ga0075436_100370699 3300006914 Bacteria 1034
70 Ga0097620_100093257 3300006931 Bacteria 3062
71 Ga0097620_100888677 3300006931 Bacteria 976
72 Ga0105240_10000394 3300009093 Bacteria 81599
73 Ga0105240_10008781 3300009093 Bacteria 14394
74 Ga0105240_10020614 3300009093 Bacteria 8788
75 Ga0105240_10235076 3300009093 Bacteria 2127
76 Ga0105240_10254612 3300009093 Bacteria 2028
77 Ga0105240_10353348 3300009093 Bacteria 1667
78 Ga0105245_10007629 3300009098 Bacteria 9475
79 Ga0105245_10049782 3300009098 Bacteria 3753
80 Ga0105245_10220504 3300009098 Bacteria 1830
81 Ga0105245_10321566 3300009098 Bacteria 1524
82 Ga0105247_10120999 3300009101 Bacteria 1696
83 Ga0114129_10083687 3300009147 Bacteria 4431
84 Ga0105243_10071993 3300009148 Unclassified 2797
85 Ga0105241_10008126 3300009174 Bacteria 7726
86 Ga0105241_10109660 3300009174 Bacteria 2207
87 Ga0105241_10147209 3300009174 Unclassified 1923
88 Ga0105241_10193859 3300009174 Bacteria 1693
89 Ga0105241_10225686 3300009174 Bacteria 1577
90 Ga0105241_10228051 3300009174 Bacteria 1569
91 Ga0105242_10122526 3300009176 Bacteria 2234
92 Ga0105242_10464768 3300009176 Unclassified 1196
93 Ga0105248_10006538 3300009177 Bacteria 12781
94 Ga0105248_10086594 3300009177 Bacteria 3525
95 Ga0105248_10137183 3300009177 Unclassified 2760
96 Ga0105248_10198285 3300009177 Bacteria 2262
97 Ga0105237_10010856 3300009545 Bacteria 9665
98 Ga0105237_10020924 3300009545 Bacteria 6734
99 Ga0105237_10107921 3300009545 Bacteria 2776
100 Ga0105237_10716866 3300009545 Unclassified 1007
101 Ga0105237_10934321 3300009545 Bacteria 874
102 Ga0105238_10008406 3300009551 Bacteria 10331
103 Ga0105238_10069265 3300009551 Bacteria 3528
104 Ga0105238_10071348 3300009551 Bacteria 3471
105 Ga0105238_10178305 3300009551 Unclassified 2101
106 Ga0105238_10202555 3300009551 Bacteria 1960
107 Ga0105249_10008347 3300009553 Bacteria 9019
108 Ga0105239_10007256 3300010375 Bacteria 12733
109 Ga0105239_10016108 3300010375 Bacteria 8271
110 Ga0105239_10123730 3300010375 Unclassified 2874
111 Ga0105246_10045245 3300011119 Bacteria 2996
112 Ga0105246_10283350 3300011119 Bacteria 1330
113 Ga0157370_10000968 3300013104 Bacteria 36361
114 Ga0157370_10020751 3300013104 Bacteria 6557
115 Ga0157370_10235018 3300013104 Bacteria 1696
116 Ga0157370_10514413 3300013104 Bacteria 1099
117 Ga0157369_10004356 3300013105 Bacteria 16702
118 Ga0157369_10004394 3300013105 Bacteria 16642
119 Ga0157369_10014538 3300013105 Bacteria 8881
120 Ga0157369_10102213 3300013105 Unclassified 3055
121 Ga0157369_10747791 3300013105 Unclassified 1006
122 Ga0163162_10021880 3300013306 Bacteria 6300
123 Ga0163162_11123172 3300013306 Unclassified 891
124 Ga0157372_10033312 3300013307 Bacteria 5657
125 Ga0157372_10162375 3300013307 Unclassified 2582
126 Ga0157372_10255742 3300013307 Unclassified 2033
127 Ga0157372_10489950 3300013307 Bacteria 1433
128 Ga0157375_10005923 3300013308 Bacteria 10655
129 Ga0157375_10155895 3300013308 Unclassified 2422
130 Ga0163163_10014950 3300014325 Bacteria 7152
131 Ga0163163_10021242 3300014325 Bacteria 6123
132 Ga0163163_10307490 3300014325 Bacteria 1638
133 Ga0163163_10797972 3300014325 Bacteria 1007
134 Ga0157379_10066364 3300014968 Bacteria 3226
135 Ga0157376_10195670 3300014969 Bacteria 1857
136 Ga0213873_10139853 3300021358 Unclassified 722
137 Ga0213872_10000123 3300021361 Bacteria 73253
138 Ga0213876_10038646 3300021384 Bacteria 2520
139 Ga0213875_10000004 3300021388 Bacteria 703388
140 Ga0213875_10000069 3300021388 Bacteria 121776
141 Ga0213875_10010578 3300021388 Bacteria 4616
142 Ga0213875_10014297 3300021388 Unclassified 3874
143 Ga0213875_10035326 3300021388 Bacteria 2359
144 Ga0213875_10086133 3300021388 Bacteria 1465
145 Ga0213871_10001229 3300021441 Bacteria 4160
146 Ga0207680_10064485 3300025903 Bacteria 2246
147 Ga0207705_10008514 3300025909 Bacteria 7481
148 Ga0207705_10053749 3300025909 Bacteria 2902
149 Ga0207705_10184804 3300025909 Bacteria 1574
150 Ga0207654_10012466 3300025911 Bacteria 4356
151 Ga0207654_10095966 3300025911 Bacteria 1817
152 Ga0207654_10106551 3300025911 Unclassified 1736
153 Ga0207707_10006193 3300025912 Bacteria 10452
154 Ga0207707_10056220 3300025912 Bacteria 3423
155 Ga0207695_10001654 3300025913 Bacteria 35916
156 Ga0207695_10003500 3300025913 Bacteria 22030
157 Ga0207695_10017792 3300025913 Bacteria 8247
158 Ga0207695_10046032 3300025913 Bacteria 4625
159 Ga0207695_10209069 3300025913 Bacteria 1863
160 Ga0207671_10034873 3300025914 Unclassified 3738
161 Ga0207671_10043116 3300025914 Bacteria 3336
162 Ga0207663_10376640 3300025916 Bacteria 1080
163 Ga0207660_10293966 3300025917 Bacteria 1292
164 Ga0207657_10007784 3300025919 Bacteria 10938
165 Ga0207649_10138405 3300025920 Bacteria 1662
166 Ga0207652_10006024 3300025921 Bacteria 9817
167 Ga0207652_10267743 3300025921 Bacteria 1541
168 Ga0207694_10001877 3300025924 Bacteria 17419
169 Ga0207687_10026773 3300025927 Bacteria 3864
170 Ga0207687_10064101 3300025927 Unclassified 2604
171 Ga0207700_10709366 3300025928 Bacteria 898
172 Ga0207644_10034928 3300025931 Bacteria 3520
173 Ga0207686_10456855 3300025934 Unclassified 983
174 Ga0207709_10042628 3300025935 Unclassified 2731
175 Ga0207711_10254159 3300025941 Bacteria 1614
176 Ga0207711_10255039 3300025941 Unclassified 1611
177 Ga0207711_10703173 3300025941 Unclassified 943
178 Ga0207661_10001576 3300025944 Bacteria 15516
179 Ga0207667_10011904 3300025949 Bacteria 10076
180 Ga0207667_10127144 3300025949 Bacteria 2625
181 Ga0207667_10179098 3300025949 Bacteria 2177
182 Ga0207667_10188933 3300025949 Unclassified 2114
183 Ga0207658_10035847 3300025986 Unclassified 3555
184 Ga0207703_10014954 3300026035 Bacteria 6056
185 Ga0207703_10099209 3300026035 Bacteria 2465
186 Ga0207703_11010073 3300026035 Bacteria 798
187 Ga0207639_10036540 3300026041 Bacteria 3641
188 Ga0207639_10278213 3300026041 Bacteria 1471
189 Ga0207702_10007019 3300026078 Bacteria 9634
190 Ga0207702_10007247 3300026078 Bacteria 9486
191 Ga0207702_10110782 3300026078 Bacteria 2440
192 Ga0207702_10750193 3300026078 Bacteria 964
193 Ga0207702_10802193 3300026078 Unclassified 930
194 Ga0207641_10032529 3300026088 Unclassified 4330
195 Ga0207641_10115739 3300026088 Bacteria 2384
196 Ga0207648_10023202 3300026089 Bacteria 5565
197 Ga0207676_10105385 3300026095 Unclassified 2347
198 Ga0207674_10003320 3300026116 Bacteria 19781
199 Ga0207674_10005510 3300026116 Bacteria 15028
200 Ga0207674_10176236 3300026116 Bacteria 2090
201 Ga0207675_100229673 3300026118 Bacteria 1790
202 Ga0207698_10095865 3300026142 Bacteria 2443
203 Ga0207698_10176203 3300026142 Bacteria 1889
204 Ga0207698_10220603 3300026142 Bacteria 1713
205 Ga0207698_10390382 3300026142 Bacteria 1327
206 Ga0268266_10013652 3300028379 Bacteria 6995
207 Ga0268264_10307242 3300028381 Archaea 1495
208 Ga0268264_10931905 3300028381 Unclassified 873
209 Ga0265325_10099379 3300031241 Bacteria 1426
210 Ga0265325_10105202 3300031241 Bacteria 1377
211 Ga0373923_0059950 3300035111 Bacteria 1614
212 Ga0373954_0001488 3300035118 Bacteria 9532
213 Ga0373954_0014834 3300035118 Unclassified 3477
214 Ga0373957_0019016 3300035120 Unclassified 2412
215 Ga0373935_0243679 3300035692 Bacteria 1256
216 Ga0373935_0493663 3300035692 Bacteria 888
217 Ga0373927_0023316 3300035695 Bacteria 4053
218 Ga0373927_0039216 3300035695 Bacteria 3074
219 Ga0373933_0230722 3300035724 Bacteria 1189
220 Ga0373933_0357568 3300035724 Unclassified 949
221 Ga0373947_0016328 3300035725 Bacteria 4267
222 Ga0373937_0016469 3300036401 Bacteria 6567
223 Ga0373937_0592399 3300036401 Bacteria 1053
224 Ga0373925_0007888 3300037068 Bacteria 7752
225 Ga0373925_0229216 3300037068 Unclassified 1485
226 Ga0373925_0332936 3300037068 Unclassified 1230
227 Ga0373925_0748562 3300037068 Bacteria 806
228 Ga0395898_0856815 3300037466 Bacteria 848
229 Ga0436364_0214096 3300037853 Unclassified 2750
230 Ga0436364_0278774 3300037853 Bacteria 400541
231 Ga0436364_0348738 3300037853 Bacteria 2168
232 Ga0436364_0380227 3300037853 Bacteria 1932
233 Ga0436364_0501664 3300037853 Unclassified 896
234 Ga0436364_0579539 3300037853 Bacteria 71293
235 Ga0436364_0677562 3300037853 Bacteria 12365
236 Ga0436364_0709353 3300037853 Bacteria 4941
237 Ga0436364_0763822 3300037853 Bacteria 7141
238 Ga0436364_0879370 3300037853 Unclassified 1321
239 Ga0436364_0935850 3300037853 Archaea 1787
240 Ga0436364_0965741 3300037853 Bacteria 4149
241 Ga0436364_1401431 3300037853 Bacteria 676
242 Ga0436364_1411939 3300037853 Bacteria 11671
243 Ga0436364_1505911 3300037853 Unclassified 1255
244 Ga0436364_1546004 3300037853 Bacteria 7201
245 Ga0436365_0864892 3300039437 Bacteria 30275
246 Ga0436365_0950263 3300039437 Unclassified 808
247 Ga0436365_1011471 3300039437 Bacteria 9553
248 Ga0436365_1101613 3300039437 Bacteria 1242
249 Ga0436360_1311663 3300039438 Bacteria 24668
250 Ga0436361_0687744 3300039447 Bacteria 71365
251 Ga0436363_0127434 3300039450 Unclassified 1172
252 Ga0436363_0191553 3300039450 Bacteria 3680
253 Ga0436363_0693248 3300039450 Bacteria 667
254 Ga0436362_0046117 3300039453 Unclassified 1334
255 Ga0436362_0522360 3300039453 Bacteria 2295
256 Ga0436362_0657996 3300039453 Unclassified 1092
257 Ga0451577_0000806 3300042876 Bacteria 47200
258 Ga0466963_0568536 3300044694 Bacteria 801
259 Ga0453684_0000080 3300044712 Bacteria 411138
260 Ga0466958_0204827 3300045836 Bacteria 1256
261 Ga0466967_0874431 3300045976 Bacteria 893
262 Ga0495651_0056615 3300046462 Bacteria 3011
263 Ga0495653_0528627 3300046463 Bacteria 732
264 Ga0495580_0044253 3300046472 Bacteria 3167
265 Ga0495580_0062609 3300046472 Unclassified 2610
266 Ga0495582_0073605 3300046473 Bacteria 1891
267 Ga0495652_0114113 3300046529 Bacteria 2168
268 Ga0495640_0352042 3300046533 Unclassified 909
269 Ga0495667_0122609 3300046559 Unclassified 1678
270 Ga0495658_0096890 3300046683 Bacteria 1755
271 Ga0495581_0262014 3300047315 Bacteria 1011
272 Ga0495684_0370471 3300047471 Unclassified 1012
273 Ga0495602_0255919 3300048088 Bacteria 1302
274 Ga0501034_0014605 3300049571 Bacteria 8086
275 Ga0501038_0355565 3300049574 Bacteria 1140
276 Ga0501043_0006526 3300049579 Bacteria 9359
277 Ga0501047_0084272 3300049581 Bacteria 3055
278 Ga0501070_0012059 3300049586 Bacteria 7294
279 Ga0501073_0101298 3300049589 Bacteria 2000
280 Ga0501239_011296 3300049672 Bacteria 996
281 Ga0501080_0758661 3300049742 Unclassified 853
282 Ga0501044_0384826 3300049823 Bacteria 1317
283 nmdc:mga0qj67_768471_c1 3300050509 Unclassified 764
284 nmdc:mga06r32_66290_c1 3300050510 Bacteria 3484
285 Ga0495619_0135987 3300053085 Bacteria 1691

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037853 Ga0436364_1401431 Ga0436364_1401431_81_656 183
2 3300039450 Ga0436363_0693248 Ga0436363_0693248_15_566 183
3 3300037853 Ga0436364_0879370 Ga0436364_0879370_13_612 191
4 3300037853 Ga0436364_1546004 Ga0436364_1546004_3302_3931 191
5 3300045976 Ga0466967_0874431 Ga0466967_0874431_26_610 191
6 3300046463 Ga0495653_0528627 Ga0495653_0528627_29_640 197
7 3300005340 Ga0070689_100125157 Ga0070689_1001251573 205
8 3300021388 Ga0213875_10000004 Ga0213875_1000000418 205
9 3300049672 Ga0501239_011296 Ga0501239_011296_19_645 205
10 3300037853 Ga0436364_0579539 Ga0436364_0579539_24088_24729 206
11 3300005459 Ga0068867_100025169 Ga0068867_1000251692 207
12 3300005617 Ga0068859_100093259 Ga0068859_1000932592 207
13 3300005719 Ga0068861_100177985 Ga0068861_1001779853 207
14 3300006931 Ga0097620_100093257 Ga0097620_1000932572 207
15 3300009098 Ga0105245_10220504 Ga0105245_102205041 207
16 3300011119 Ga0105246_10045245 Ga0105246_100452452 207
17 3300026118 Ga0207675_100229673 Ga0207675_1002296732 207
18 3300028381 Ga0268264_10931905 Ga0268264_109319052 207
19 3300005338 Ga0068868_100162116 Ga0068868_1001621163 209
20 3300046529 Ga0495652_0114113 Ga0495652_0114113_14_661 211
21 3300009177 Ga0105248_10006538 Ga0105248_100065385 213
22 3300025941 Ga0207711_10254159 Ga0207711_102541593 213
23 3300046472 Ga0495580_0044253 Ga0495580_0044253_2398_3060 213
24 3300005563 Ga0068855_100018526 Ga0068855_1000185263 215
25 3300005577 Ga0068857_100001898 Ga0068857_1000018987 215
26 3300005614 Ga0068856_100007638 Ga0068856_1000076383 215
27 3300025912 Ga0207707_10006193 Ga0207707_100061933 215
28 3300025913 Ga0207695_10003500 Ga0207695_100035009 215
29 3300025914 Ga0207671_10034873 Ga0207671_100348733 215
30 3300025921 Ga0207652_10006024 Ga0207652_100060243 215
31 3300025924 Ga0207694_10001877 Ga0207694_100018777 215
32 3300025944 Ga0207661_10001576 Ga0207661_100015766 215
33 3300025949 Ga0207667_10011904 Ga0207667_100119043 215
34 3300026078 Ga0207702_10007019 Ga0207702_100070196 215
35 3300026116 Ga0207674_10003320 Ga0207674_100033209 215
36 3300037853 Ga0436364_0677562 Ga0436364_0677562_8658_9359 215
37 3300039453 Ga0436362_0657996 Ga0436362_0657996_47_700 215
38 3300046472 Ga0495580_0062609 Ga0495580_0062609_1577_2260 219
39 3300014325 Ga0163163_10021242 Ga0163163_100212422 220
40 3300005545 Ga0070695_100049950 Ga0070695_1000499503 221
41 3300005547 Ga0070693_100073635 Ga0070693_1000736352 221
42 3300006914 Ga0075436_100370699 Ga0075436_1003706992 221
43 3300009174 Ga0105241_10225686 Ga0105241_102256861 221
44 3300009545 Ga0105237_10934321 Ga0105237_109343211 221
45 3300013105 Ga0157369_10014538 Ga0157369_100145385 221
46 3300013308 Ga0157375_10155895 Ga0157375_101558951 221
47 3300026035 Ga0207703_11010073 Ga0207703_110100731 221
48 3300037068 Ga0373925_0229216 Ga0373925_0229216_703_1401 221
49 3300037853 Ga0436364_0214096 Ga0436364_0214096_270_941 221
50 3300039438 Ga0436360_1311663 Ga0436360_1311663_14306_15010 221
51 3300026089 Ga0207648_10023202 Ga0207648_100232022 222
52 3300005329 Ga0070683_100000031 Ga0070683_10000003165 224
53 3300005518 Ga0070699_100727765 Ga0070699_1007277651 224
54 3300005563 Ga0068855_100157242 Ga0068855_1001572422 224
55 3300005937 Ga0081455_10084175 Ga0081455_100841752 224
56 3300006847 Ga0075431_100032946 Ga0075431_1000329465 224
57 3300009147 Ga0114129_10083687 Ga0114129_100836873 224
58 3300021384 Ga0213876_10038646 Ga0213876_100386461 224
59 3300021388 Ga0213875_10010578 Ga0213875_100105783 224
60 3300021441 Ga0213871_10001229 Ga0213871_100012293 224
61 3300037853 Ga0436364_0380227 Ga0436364_0380227_1200_1901 224
62 3300037853 Ga0436364_1411939 Ga0436364_1411939_1298_1993 224
63 3300039437 Ga0436365_0864892 Ga0436365_0864892_6017_6736 224
64 3300039437 Ga0436365_1011471 Ga0436365_1011471_1893_2588 224
65 3300039450 Ga0436363_0191553 Ga0436363_0191553_2315_2995 224
66 3300039453 Ga0436362_0046117 Ga0436362_0046117_169_903 224
67 3300042876 Ga0451577_0000806 Ga0451577_0000806_6200_6919 224
68 3300044712 Ga0453684_0000080 Ga0453684_0000080_61021_61740 224
69 3300050509 nmdc:mga0qj67_768471_c1 nmdc:mga0qj67_768471_c1_49_732 224
70 3300050510 nmdc:mga06r32_66290_c1 nmdc:mga06r32_66290_c1_1980_2663 224
71 3300005327 Ga0070658_10013446 Ga0070658_100134463 225
72 3300005327 Ga0070658_10120548 Ga0070658_101205482 225
73 3300005327 Ga0070658_10149055 Ga0070658_101490552 225
74 3300005327 Ga0070658_10265090 Ga0070658_102650902 225
75 3300005327 Ga0070658_10644020 Ga0070658_106440201 225
76 3300005329 Ga0070683_100000834 Ga0070683_10000083411 225
77 3300005334 Ga0068869_100279479 Ga0068869_1002794792 225
78 3300005335 Ga0070666_10046091 Ga0070666_100460912 225
79 3300005335 Ga0070666_10648143 Ga0070666_106481431 225
80 3300005336 Ga0070680_100009674 Ga0070680_1000096747 225
81 3300005338 Ga0068868_100014086 Ga0068868_1000140865 225
82 3300005339 Ga0070660_100006658 Ga0070660_1000066588 225
83 3300005339 Ga0070660_100065809 Ga0070660_1000658092 225
84 3300005344 Ga0070661_100060311 Ga0070661_1000603112 225
85 3300005355 Ga0070671_100112032 Ga0070671_1001120322 225
86 3300005367 Ga0070667_100092844 Ga0070667_1000928443 225
87 3300005435 Ga0070714_100094831 Ga0070714_1000948313 225
88 3300005458 Ga0070681_10000603 Ga0070681_100006033 225
89 3300005458 Ga0070681_10021363 Ga0070681_100213632 225
90 3300005530 Ga0070679_100002388 Ga0070679_1000023887 225
91 3300005530 Ga0070679_100317696 Ga0070679_1003176961 225
92 3300005530 Ga0070679_100517421 Ga0070679_1005174212 225
93 3300005535 Ga0070684_100001688 Ga0070684_1000016887 225
94 3300005539 Ga0068853_100028342 Ga0068853_1000283423 225
95 3300005539 Ga0068853_100209827 Ga0068853_1002098272 225
96 3300005548 Ga0070665_100225344 Ga0070665_1002253444 225
97 3300005563 Ga0068855_100018337 Ga0068855_1000183372 225
98 3300005563 Ga0068855_100052908 Ga0068855_1000529084 225
99 3300005563 Ga0068855_100187148 Ga0068855_1001871482 225
100 3300005563 Ga0068855_100486857 Ga0068855_1004868572 225
101 3300005563 Ga0068855_100516429 Ga0068855_1005164292 225
102 3300005577 Ga0068857_100003245 Ga0068857_1000032457 225
103 3300005577 Ga0068857_100122236 Ga0068857_1001222363 225
104 3300005614 Ga0068856_100008857 Ga0068856_1000088574 225
105 3300005614 Ga0068856_100052854 Ga0068856_1000528543 225
106 3300005614 Ga0068856_100081819 Ga0068856_1000818192 225
107 3300005614 Ga0068856_100459760 Ga0068856_1004597602 225
108 3300005616 Ga0068852_100008568 Ga0068852_1000085688 225
109 3300005616 Ga0068852_100108206 Ga0068852_1001082062 225
110 3300005616 Ga0068852_100117262 Ga0068852_1001172622 225
111 3300005616 Ga0068852_100235591 Ga0068852_1002355912 225
112 3300005616 Ga0068852_100297500 Ga0068852_1002975001 225
113 3300005616 Ga0068852_100838539 Ga0068852_1008385392 225
114 3300005617 Ga0068859_100888764 Ga0068859_1008887642 225
115 3300005618 Ga0068864_100098309 Ga0068864_1000983092 225
116 3300005834 Ga0068851_10289568 Ga0068851_102895681 225
117 3300005842 Ga0068858_100004704 Ga0068858_1000047049 225
118 3300005842 Ga0068858_100123289 Ga0068858_1001232893 225
119 3300005843 Ga0068860_100226419 Ga0068860_1002264192 225
120 3300006175 Ga0070712_100888433 Ga0070712_1008884331 225
121 3300006237 Ga0097621_100037831 Ga0097621_1000378312 225
122 3300006358 Ga0068871_100005165 Ga0068871_1000051653 225
123 3300006358 Ga0068871_100145482 Ga0068871_1001454822 225
124 3300006931 Ga0097620_100888677 Ga0097620_1008886772 225
125 3300009093 Ga0105240_10000394 Ga0105240_1000039423 225
126 3300009093 Ga0105240_10008781 Ga0105240_1000878111 225
127 3300009093 Ga0105240_10020614 Ga0105240_100206145 225
128 3300009093 Ga0105240_10235076 Ga0105240_102350762 225
129 3300009093 Ga0105240_10254612 Ga0105240_102546122 225
130 3300009093 Ga0105240_10353348 Ga0105240_103533482 225
131 3300009098 Ga0105245_10007629 Ga0105245_100076297 225
132 3300009098 Ga0105245_10049782 Ga0105245_100497822 225
133 3300009098 Ga0105245_10321566 Ga0105245_103215662 225
134 3300009101 Ga0105247_10120999 Ga0105247_101209992 225
135 3300009148 Ga0105243_10071993 Ga0105243_100719932 225
136 3300009174 Ga0105241_10008126 Ga0105241_100081265 225
137 3300009174 Ga0105241_10109660 Ga0105241_101096602 225
138 3300009174 Ga0105241_10147209 Ga0105241_101472092 225
139 3300009174 Ga0105241_10193859 Ga0105241_101938592 225
140 3300009174 Ga0105241_10228051 Ga0105241_102280512 225
141 3300009176 Ga0105242_10122526 Ga0105242_101225263 225
142 3300009176 Ga0105242_10464768 Ga0105242_104647682 225
143 3300009177 Ga0105248_10086594 Ga0105248_100865942 225
144 3300009177 Ga0105248_10137183 Ga0105248_101371833 225
145 3300009177 Ga0105248_10198285 Ga0105248_101982852 225
146 3300009545 Ga0105237_10010856 Ga0105237_100108563 225
147 3300009545 Ga0105237_10020924 Ga0105237_100209247 225
148 3300009545 Ga0105237_10107921 Ga0105237_101079214 225
149 3300009545 Ga0105237_10716866 Ga0105237_107168662 225
150 3300009551 Ga0105238_10008406 Ga0105238_100084067 225
151 3300009551 Ga0105238_10069265 Ga0105238_100692653 225
152 3300009551 Ga0105238_10071348 Ga0105238_100713484 225
153 3300009551 Ga0105238_10178305 Ga0105238_101783053 225
154 3300009551 Ga0105238_10202555 Ga0105238_102025552 225
155 3300009553 Ga0105249_10008347 Ga0105249_100083474 225
156 3300010375 Ga0105239_10007256 Ga0105239_100072564 225
157 3300010375 Ga0105239_10016108 Ga0105239_100161085 225
158 3300010375 Ga0105239_10123730 Ga0105239_101237302 225
159 3300011119 Ga0105246_10283350 Ga0105246_102833503 225
160 3300013104 Ga0157370_10000968 Ga0157370_1000096818 225
161 3300013104 Ga0157370_10020751 Ga0157370_100207514 225
162 3300013104 Ga0157370_10235018 Ga0157370_102350182 225
163 3300013104 Ga0157370_10514413 Ga0157370_105144132 225
164 3300013105 Ga0157369_10004356 Ga0157369_1000435611 225
165 3300013105 Ga0157369_10004394 Ga0157369_100043946 225
166 3300013105 Ga0157369_10102213 Ga0157369_101022132 225
167 3300013105 Ga0157369_10747791 Ga0157369_107477911 225
168 3300013306 Ga0163162_10021880 Ga0163162_100218804 225
169 3300013306 Ga0163162_11123172 Ga0163162_111231722 225
170 3300013307 Ga0157372_10033312 Ga0157372_100333124 225
171 3300013307 Ga0157372_10162375 Ga0157372_101623754 225
172 3300013307 Ga0157372_10255742 Ga0157372_102557422 225
173 3300013307 Ga0157372_10489950 Ga0157372_104899502 225
174 3300013308 Ga0157375_10005923 Ga0157375_100059239 225
175 3300014325 Ga0163163_10014950 Ga0163163_100149502 225
176 3300014325 Ga0163163_10307490 Ga0163163_103074902 225
177 3300014325 Ga0163163_10797972 Ga0163163_107979721 225
178 3300014968 Ga0157379_10066364 Ga0157379_100663642 225
179 3300014969 Ga0157376_10195670 Ga0157376_101956703 225
180 3300021358 Ga0213873_10139853 Ga0213873_101398531 225
181 3300021361 Ga0213872_10000123 Ga0213872_1000012340 225
182 3300021388 Ga0213875_10000069 Ga0213875_1000006945 225
183 3300021388 Ga0213875_10014297 Ga0213875_100142973 225
184 3300021388 Ga0213875_10035326 Ga0213875_100353262 225
185 3300021388 Ga0213875_10086133 Ga0213875_100861332 225
186 3300025903 Ga0207680_10064485 Ga0207680_100644853 225
187 3300025909 Ga0207705_10008514 Ga0207705_100085148 225
188 3300025909 Ga0207705_10053749 Ga0207705_100537495 225
189 3300025909 Ga0207705_10184804 Ga0207705_101848042 225
190 3300025911 Ga0207654_10012466 Ga0207654_100124663 225
191 3300025911 Ga0207654_10095966 Ga0207654_100959662 225
192 3300025911 Ga0207654_10106551 Ga0207654_101065511 225
193 3300025912 Ga0207707_10056220 Ga0207707_100562202 225
194 3300025913 Ga0207695_10001654 Ga0207695_1000165428 225
195 3300025913 Ga0207695_10017792 Ga0207695_100177925 225
196 3300025913 Ga0207695_10046032 Ga0207695_100460322 225
197 3300025913 Ga0207695_10209069 Ga0207695_102090692 225
198 3300025914 Ga0207671_10043116 Ga0207671_100431163 225
199 3300025916 Ga0207663_10376640 Ga0207663_103766401 225
200 3300025917 Ga0207660_10293966 Ga0207660_102939662 225
201 3300025919 Ga0207657_10007784 Ga0207657_100077843 225
202 3300025920 Ga0207649_10138405 Ga0207649_101384052 225
203 3300025921 Ga0207652_10267743 Ga0207652_102677433 225
204 3300025927 Ga0207687_10026773 Ga0207687_100267732 225
205 3300025927 Ga0207687_10064101 Ga0207687_100641012 225
206 3300025928 Ga0207700_10709366 Ga0207700_107093662 225
207 3300025931 Ga0207644_10034928 Ga0207644_100349282 225
208 3300025934 Ga0207686_10456855 Ga0207686_104568551 225
209 3300025935 Ga0207709_10042628 Ga0207709_100426282 225
210 3300025941 Ga0207711_10255039 Ga0207711_102550393 225
211 3300025941 Ga0207711_10703173 Ga0207711_107031732 225
212 3300025949 Ga0207667_10127144 Ga0207667_101271442 225
213 3300025949 Ga0207667_10179098 Ga0207667_101790983 225
214 3300025949 Ga0207667_10188933 Ga0207667_101889333 225
215 3300025986 Ga0207658_10035847 Ga0207658_100358472 225
216 3300026035 Ga0207703_10014954 Ga0207703_100149546 225
217 3300026035 Ga0207703_10099209 Ga0207703_100992093 225
218 3300026041 Ga0207639_10036540 Ga0207639_100365404 225
219 3300026041 Ga0207639_10278213 Ga0207639_102782132 225
220 3300026078 Ga0207702_10007247 Ga0207702_100072474 225
221 3300026078 Ga0207702_10110782 Ga0207702_101107824 225
222 3300026078 Ga0207702_10750193 Ga0207702_107501931 225
223 3300026078 Ga0207702_10802193 Ga0207702_108021932 225
224 3300026088 Ga0207641_10032529 Ga0207641_100325293 225
225 3300026088 Ga0207641_10115739 Ga0207641_101157393 225
226 3300026095 Ga0207676_10105385 Ga0207676_101053852 225
227 3300026116 Ga0207674_10005510 Ga0207674_100055107 225
228 3300026116 Ga0207674_10176236 Ga0207674_101762364 225
229 3300026142 Ga0207698_10095865 Ga0207698_100958655 225
230 3300026142 Ga0207698_10176203 Ga0207698_101762032 225
231 3300026142 Ga0207698_10220603 Ga0207698_102206032 225
232 3300026142 Ga0207698_10390382 Ga0207698_103903822 225
233 3300028379 Ga0268266_10013652 Ga0268266_100136523 225
234 3300028381 Ga0268264_10307242 Ga0268264_103072421 225
235 3300031241 Ga0265325_10099379 Ga0265325_100993792 225
236 3300031241 Ga0265325_10105202 Ga0265325_101052021 225
237 3300035111 Ga0373923_0059950 Ga0373923_0059950_576_1265 225
238 3300035118 Ga0373954_0001488 Ga0373954_0001488_6293_6982 225
239 3300035118 Ga0373954_0014834 Ga0373954_0014834_2605_3294 225
240 3300035120 Ga0373957_0019016 Ga0373957_0019016_351_1040 225
241 3300035692 Ga0373935_0243679 Ga0373935_0243679_499_1188 225
242 3300035692 Ga0373935_0493663 Ga0373935_0493663_58_756 225
243 3300035695 Ga0373927_0023316 Ga0373927_0023316_2191_2883 225
244 3300035695 Ga0373927_0039216 Ga0373927_0039216_1872_2570 225
245 3300035724 Ga0373933_0230722 Ga0373933_0230722_189_878 225
246 3300035724 Ga0373933_0357568 Ga0373933_0357568_40_729 225
247 3300035725 Ga0373947_0016328 Ga0373947_0016328_2507_3196 225
248 3300036401 Ga0373937_0016469 Ga0373937_0016469_3383_4072 225
249 3300036401 Ga0373937_0592399 Ga0373937_0592399_52_750 225
250 3300037068 Ga0373925_0007888 Ga0373925_0007888_6385_7074 225
251 3300037068 Ga0373925_0332936 Ga0373925_0332936_354_1052 225
252 3300037068 Ga0373925_0748562 Ga0373925_0748562_90_785 225
253 3300037466 Ga0395898_0856815 Ga0395898_0856815_137_826 225
254 3300037853 Ga0436364_0278774 Ga0436364_0278774_139641_140348 225
255 3300037853 Ga0436364_0348738 Ga0436364_0348738_476_1192 225
256 3300037853 Ga0436364_0501664 Ga0436364_0501664_191_874 225
257 3300037853 Ga0436364_0709353 Ga0436364_0709353_2558_3271 225
258 3300037853 Ga0436364_0763822 Ga0436364_0763822_5975_6685 225
259 3300037853 Ga0436364_0935850 Ga0436364_0935850_195_905 225
260 3300037853 Ga0436364_0965741 Ga0436364_0965741_2002_2712 225
261 3300037853 Ga0436364_1505911 Ga0436364_1505911_355_1065 225
262 3300039437 Ga0436365_0950263 Ga0436365_0950263_44_727 225
263 3300039437 Ga0436365_1101613 Ga0436365_1101613_480_1202 225
264 3300039447 Ga0436361_0687744 Ga0436361_0687744_46160_46858 225
265 3300039450 Ga0436363_0127434 Ga0436363_0127434_217_945 225
266 3300039453 Ga0436362_0522360 Ga0436362_0522360_213_893 225
267 3300044694 Ga0466963_0568536 Ga0466963_0568536_28_720 225
268 3300045836 Ga0466958_0204827 Ga0466958_0204827_431_1123 225
269 3300046462 Ga0495651_0056615 Ga0495651_0056615_663_1352 225
270 3300046473 Ga0495582_0073605 Ga0495582_0073605_434_1123 225
271 3300046533 Ga0495640_0352042 Ga0495640_0352042_151_849 225
272 3300046559 Ga0495667_0122609 Ga0495667_0122609_975_1664 225
273 3300046683 Ga0495658_0096890 Ga0495658_0096890_768_1457 225
274 3300047315 Ga0495581_0262014 Ga0495581_0262014_105_806 225
275 3300047471 Ga0495684_0370471 Ga0495684_0370471_131_829 225
276 3300048088 Ga0495602_0255919 Ga0495602_0255919_141_839 225
277 3300049571 Ga0501034_0014605 Ga0501034_0014605_6870_7571 225
278 3300049574 Ga0501038_0355565 Ga0501038_0355565_14_715 225
279 3300049579 Ga0501043_0006526 Ga0501043_0006526_7182_7883 225
280 3300049581 Ga0501047_0084272 Ga0501047_0084272_1553_2230 225
281 3300049586 Ga0501070_0012059 Ga0501070_0012059_5495_6196 225
282 3300049589 Ga0501073_0101298 Ga0501073_0101298_950_1651 225
283 3300049742 Ga0501080_0758661 Ga0501080_0758661_67_768 225
284 3300049823 Ga0501044_0384826 Ga0501044_0384826_88_789 225
285 3300053085 Ga0495619_0135987 Ga0495619_0135987_152_841 225

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00215

OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

21

239

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1jjk-assembly1.cif.gz_A selenomethionine substitution of orotidine-5'-monophosphate decarboxylase from e. coli causes a change in crystal contacts and space group 0.9648 2 225
8cso-assembly1.cif.gz_B crystal structure of orotidine 5'-phosphate decarboxylase from klebsiella pneumoniae in complex with uridine-5'-monophosphate 0.964 3 224
1dbt-assembly2.cif.gz_C-2 crystal structure of orotidine 5'-monophosphate decarboxylase from bacillus subtilis complexed with ump 0.9573 3 224
1jjk-assembly1.cif.gz_A selenomethionine substitution of orotidine-5'-monophosphate decarboxylase from e. coli causes a change in crystal contacts and space group 0.9565 2 225
8cso-assembly5.cif.gz_J crystal structure of orotidine 5'-phosphate decarboxylase from klebsiella pneumoniae in complex with uridine-5'-monophosphate 0.9517 6 172
ID Description Score Start End Superfamily
1jjkA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9374 2 225 3.20.20.70
1jjkA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9252 2 225 3.20.20.70
2yyuB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.921 2 225 3.20.20.70
2yyuB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9132 2 225 3.20.20.70
3ru6D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9095 3 223 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A317IZT0-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) 0.9885 3 224 GO:0004590
GO:0005829
GO:0006207
GO:0044205
AF-A0A2V9I1S5-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) 0.9837 6 113 GO:0004590
GO:0005829
GO:0006207
GO:0044205
AF-A0A7C8LS78-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) 0.9814 47 224 GO:0004590
GO:0005829
GO:0006207
GO:0044205
AF-A0A7C3E161-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) 0.9803 2 224 GO:0004590
GO:0005829
GO:0006207
GO:0044205
AF-B9JZC0-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) 0.9802 4 224 GO:0004590
GO:0005829
GO:0006207
GO:0044205

Feature Viewer

pLDDT pTM Quality
95.96 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map