F386774

General Info

Members Datasets Scaffolds Average Seq Length
285 158 570 555

Family's Representative Sequence

Representative Sequence 3300009553|Ga0105249_10064317|Ga0105249_100643172
Length 624
Sequence MRQSGTMQRYALLLTAIAARAHAGRDHLAPKLGVKTETLQARERGKRCEDASHSKSASREIHRDCFLSRKLLECVRVLAPLLLLISLALSAAVQAQPDSLEQLADDFWAWRVKNAPFTSDDVNRIERLGGMRDWSRASIDQRGKDLAGFEARWKKLNPAQWPIPKQVDYKLIGSALSRVRWEREVNPRWKRDPNFYIEQTLTALAETLTVPAPYDEARSREILTRIENIPSILQQGSENLDKPPAPFASVAVQNLDGIRERLHKMAGALVASTNLKLDELNAATDRAADALEKFQQQLKDKLPKLPQRTALGRDAYVWLLRNVALMPFTPEELLAMGRQEWNRAVAFEAYEKNRNKDAPPLKIATDINTWLKDAAEKELQIRKFLDERGILTVPKWVQHYTLQPTPEYLRALEFTEHDDFTSPSRLNENCIRYVPEPSEKLGYFWRATAMDPRPITVHEGIPGHYFQLCLSWKNEDPIRRHYYDSGANEGIGFYAEEMMLQAGLFDDSPHTREIIYNFMRLRALRVEVDVKLALGEFTLEQAAKYLREKVPMDEQTARQEAIAFSTNPGGAMTYQIGKLQILKFLADARMQQGDKFNLRAFHDFVWKNGNVPIALQEWEYFGQE

Samples

Sample ID Description Type Environment
1 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300002126 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
34 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
35 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
36 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
37 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
40 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
41 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
54 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
73 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
75 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
107 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
108 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
109 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
110 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
113 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
122 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
123 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
124 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
125 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
126 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
127 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
128 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
129 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
130 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
131 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
132 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
133 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
141 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
142 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.3
Metatranscriptomes 0.7
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.02
Rhizosphere 90.18
Stem 0
Stem Tuber 0
Unclassified 14.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105249_10064317 3300009553 Bacteria 3372
2 LJNas_1000186 3300000546 Bacteria 10421
3 JGI24035J26624_1000690 3300002126 Bacteria 3131
4 JGI25406J46586_10000001 3300003203 Bacteria 251772
5 Ga0065703_1019253 3300005272 Unclassified 3394
6 Ga0065712_10002023 3300005290 Bacteria 5442
7 Ga0065712_10006244 3300005290 Bacteria 4842
8 Ga0065712_10015876 3300005290 Bacteria 2602
9 Ga0065715_10001307 3300005293 Bacteria 8733
10 Ga0065715_10009348 3300005293 Bacteria 3857
11 Ga0065715_10095766 3300005293 Bacteria 3992
12 Ga0070676_10012733 3300005328 Bacteria 4600
13 Ga0070690_100114255 3300005330 Unclassified 1805
14 Ga0070670_100067752 3300005331 Unclassified 3062
15 Ga0070670_100087413 3300005331 Bacteria 2679
16 Ga0070666_10013647 3300005335 Bacteria 5159
17 Ga0070666_10096884 3300005335 Bacteria 2031
18 Ga0070689_100000264 3300005340 Bacteria 30144
19 Ga0070689_100045482 3300005340 Bacteria 3381
20 Ga0070687_100003763 3300005343 Bacteria 5945
21 Ga0070668_100053605 3300005347 Bacteria 3110
22 Ga0070668_100085005 3300005347 Bacteria 2486
23 Ga0070669_100025305 3300005353 Bacteria 4262
24 Ga0070675_100004640 3300005354 Bacteria 10491
25 Ga0070671_100018089 3300005355 Bacteria 5720
26 Ga0070671_100031059 3300005355 Unclassified 4411
27 Ga0070671_100094086 3300005355 Bacteria 2511
28 Ga0070674_100012210 3300005356 Bacteria 5270
29 Ga0070674_100063912 3300005356 Bacteria 2577
30 Ga0070673_100027022 3300005364 Bacteria 4248
31 Ga0070673_100080000 3300005364 Bacteria 2647
32 Ga0070688_100008983 3300005365 Bacteria 5445
33 Ga0070688_100056827 3300005365 Bacteria 2458
34 Ga0070659_100023306 3300005366 Bacteria 4736
35 Ga0070667_100184015 3300005367 Unclassified 1848
36 Ga0070709_10033554 3300005434 Bacteria 3105
37 Ga0070714_100006555 3300005435 Bacteria 9004
38 Ga0070714_100016675 3300005435 Bacteria 5937
39 Ga0070713_100000134 3300005436 Bacteria 48639
40 Ga0070713_100015409 3300005436 Bacteria 5713
41 Ga0070713_100107432 3300005436 Unclassified 2428
42 Ga0070710_10002880 3300005437 Bacteria 8201
43 Ga0070700_100015653 3300005441 Bacteria 4305
44 Ga0070694_100017143 3300005444 Bacteria 4571
45 Ga0070694_100036745 3300005444 Bacteria 3246
46 Ga0070708_100009496 3300005445 Bacteria 7840
47 Ga0070708_100016324 3300005445 Bacteria 6159
48 Ga0070708_100025232 3300005445 Bacteria 5080
49 Ga0070708_100073568 3300005445 Bacteria 3081
50 Ga0070708_100180108 3300005445 Bacteria 1975
51 Ga0070678_100018607 3300005456 Bacteria 4505
52 Ga0070678_100036185 3300005456 Bacteria 3453
53 Ga0070662_100046937 3300005457 Bacteria 3105
54 Ga0070681_10203314 3300005458 Bacteria 1898
55 Ga0070685_10011752 3300005466 Bacteria 4590
56 Ga0070706_100000011 3300005467 Bacteria 198585
57 Ga0070706_100004077 3300005467 Bacteria 14207
58 Ga0070706_100052347 3300005467 Bacteria 3768
59 Ga0070706_100110796 3300005467 Bacteria 2555
60 Ga0070707_100000989 3300005468 Bacteria 28113
61 Ga0070707_100001045 3300005468 Bacteria 27417
62 Ga0070707_100004588 3300005468 Bacteria 12924
63 Ga0070707_100040232 3300005468 Bacteria 4472
64 Ga0070707_100043385 3300005468 Bacteria 4305
65 Ga0070707_100134420 3300005468 Unclassified 2406
66 Ga0070698_100000837 3300005471 Bacteria 33661
67 Ga0070699_100009645 3300005518 Bacteria 8357
68 Ga0070699_100070696 3300005518 Bacteria 3034
69 Ga0070699_100127330 3300005518 Unclassified 2243
70 Ga0070679_100051761 3300005530 Bacteria 4090
71 Ga0070684_100000110 3300005535 Bacteria 53697
72 Ga0070697_100002724 3300005536 Bacteria 13616
73 Ga0070697_100015614 3300005536 Bacteria 5963
74 Ga0070697_100016417 3300005536 Bacteria 5823
75 Ga0070697_100024094 3300005536 Bacteria 4844
76 Ga0070697_100039082 3300005536 Bacteria 3836
77 Ga0070697_100039665 3300005536 Bacteria 3808
78 Ga0070697_100070508 3300005536 Bacteria 2865
79 Ga0070697_100079456 3300005536 Bacteria 2700
80 Ga0070697_100139310 3300005536 Unclassified 2039
81 Ga0070672_100048895 3300005543 Bacteria 3288
82 Ga0070672_100112511 3300005543 Unclassified 2221
83 Ga0070696_100009963 3300005546 Bacteria 6357
84 Ga0070665_100045970 3300005548 Bacteria 4385
85 Ga0070665_100045975 3300005548 Unclassified 4385
86 Ga0070665_100057360 3300005548 Unclassified 3903
87 Ga0070704_100000748 3300005549 Bacteria 15972
88 Ga0070704_100027459 3300005549 Unclassified 3776
89 Ga0068859_100101803 3300005617 Unclassified 2930
90 Ga0068861_100089383 3300005719 Bacteria 2428
91 Ga0068863_100008347 3300005841 Bacteria 10115
92 Ga0068863_100018699 3300005841 Bacteria 6630
93 Ga0068858_100006415 3300005842 Bacteria 11457
94 Ga0068860_100003526 3300005843 Bacteria 16089
95 Ga0081455_10000281 3300005937 Bacteria 67337
96 Ga0081455_10004438 3300005937 Bacteria 15746
97 Ga0081455_10006289 3300005937 Bacteria 12770
98 Ga0081455_10021776 3300005937 Bacteria 6005
99 Ga0081455_10057230 3300005937 Bacteria 3305
100 Ga0081455_10074567 3300005937 Bacteria 2802
101 Ga0081540_1000927 3300005983 Bacteria 26363
102 Ga0081539_10000014 3300005985 Bacteria 411270
103 Ga0081539_10000517 3300005985 Bacteria 80413
104 Ga0081539_10013645 3300005985 Bacteria 6109
105 Ga0081539_10019357 3300005985 Bacteria 4665
106 Ga0081539_10028737 3300005985 Bacteria 3491
107 Ga0070717_10001280 3300006028 Bacteria 17207
108 Ga0070717_10007133 3300006028 Bacteria 8281
109 Ga0070717_10025690 3300006028 Unclassified 4689
110 Ga0070717_10026090 3300006028 Bacteria 4657
111 Ga0070712_100000262 3300006175 Bacteria 29465
112 Ga0070712_100013517 3300006175 Bacteria 5218
113 Ga0070712_100086602 3300006175 Bacteria 2283
114 Ga0097621_100048957 3300006237 Bacteria 3431
115 Ga0075428_100059114 3300006844 Bacteria 4198
116 Ga0075430_100017323 3300006846 Bacteria 6136
117 Ga0075434_100006321 3300006871 Bacteria 10859
118 Ga0075436_100001444 3300006914 Bacteria 16138
119 Ga0097620_100101801 3300006931 Unclassified 2930
120 Ga0114129_10012621 3300009147 Bacteria 12027
121 Ga0105249_10002427 3300009553 Bacteria 16172
122 Ga0105239_10015761 3300010375 Bacteria 8366
123 Ga0105239_10029184 3300010375 Bacteria 6065
124 Ga0105239_10034525 3300010375 Bacteria 5555
125 Ga0157369_10184320 3300013105 Bacteria 2195
126 Ga0157374_10109597 3300013296 Bacteria 2654
127 Ga0157378_10025924 3300013297 Bacteria 5166
128 Ga0157378_10050961 3300013297 Bacteria 3683
129 Ga0157378_10104814 3300013297 Bacteria 2585
130 Ga0163162_10014591 3300013306 Bacteria 7677
131 Ga0163162_10045204 3300013306 Bacteria 4412
132 Ga0157372_10150252 3300013307 Bacteria 2688
133 Ga0157375_10001641 3300013308 Bacteria 19239
134 Ga0157375_10006194 3300013308 Bacteria 10423
135 Ga0157375_10032863 3300013308 Unclassified 4925
136 Ga0157375_10138289 3300013308 Bacteria 2561
137 Ga0157375_10217467 3300013308 Bacteria 2069
138 Ga0157375_10225231 3300013308 Unclassified 2034
139 Ga0157375_10248486 3300013308 Unclassified 1939
140 Ga0163163_10028461 3300014325 Bacteria 5366
141 Ga0163163_10045694 3300014325 Bacteria 4300
142 Ga0157377_10001754 3300014745 Bacteria 9448
143 Ga0157376_10000437 3300014969 Bacteria 26851
144 Ga0157376_10013680 3300014969 Bacteria 6065
145 Ga0157376_10017580 3300014969 Bacteria 5460
146 Ga0157376_10197389 3300014969 Unclassified 1849
147 Ga0213876_10000893 3300021384 Bacteria 19920
148 Ga0213876_10030212 3300021384 Bacteria 2857
149 Ga0207666_1000381 3300025271 Bacteria 5887
150 Ga0207673_1000249 3300025290 Bacteria 5477
151 Ga0207697_10000141 3300025315 Bacteria 34858
152 Ga0207697_10000440 3300025315 Bacteria 23431
153 Ga0207697_10002631 3300025315 Bacteria 9226
154 Ga0207697_10003547 3300025315 Bacteria 7684
155 Ga0207697_10007620 3300025315 Bacteria 4807
156 Ga0207680_10027252 3300025903 Bacteria 3179
157 Ga0207647_10002251 3300025904 Bacteria 14706
158 Ga0207685_10020020 3300025905 Bacteria 2216
159 Ga0207645_10018464 3300025907 Bacteria 4587
160 Ga0207645_10028551 3300025907 Unclassified 3601
161 Ga0207684_10000052 3300025910 Bacteria 228510
162 Ga0207684_10002065 3300025910 Bacteria 20665
163 Ga0207684_10012588 3300025910 Bacteria 7352
164 Ga0207684_10012949 3300025910 Bacteria 7222
165 Ga0207684_10060232 3300025910 Bacteria 3224
166 Ga0207693_10000275 3300025915 Bacteria 47590
167 Ga0207693_10007441 3300025915 Bacteria 9005
168 Ga0207693_10016499 3300025915 Bacteria 5901
169 Ga0207693_10024629 3300025915 Unclassified 4773
170 Ga0207693_10075682 3300025915 Bacteria 2636
171 Ga0207663_10004264 3300025916 Bacteria 7096
172 Ga0207663_10044068 3300025916 Bacteria 2736
173 Ga0207663_10090651 3300025916 Unclassified 2027
174 Ga0207662_10011496 3300025918 Bacteria 4913
175 Ga0207657_10036911 3300025919 Bacteria 4370
176 Ga0207652_10013365 3300025921 Bacteria 6648
177 Ga0207646_10000317 3300025922 Bacteria 65310
178 Ga0207646_10000653 3300025922 Bacteria 44777
179 Ga0207646_10001552 3300025922 Bacteria 28129
180 Ga0207646_10002190 3300025922 Bacteria 23305
181 Ga0207646_10031296 3300025922 Unclassified 4817
182 Ga0207646_10036908 3300025922 Bacteria 4409
183 Ga0207659_10055512 3300025926 Bacteria 2834
184 Ga0207700_10000111 3300025928 Bacteria 48784
185 Ga0207700_10041961 3300025928 Bacteria 3351
186 Ga0207670_10000380 3300025936 Bacteria 25579
187 Ga0207670_10123097 3300025936 Unclassified 1889
188 Ga0207669_10075670 3300025937 Unclassified 2134
189 Ga0207665_10042029 3300025939 Unclassified 3055
190 Ga0207665_10068905 3300025939 Unclassified 2411
191 Ga0207691_10001256 3300025940 Bacteria 25380
192 Ga0207691_10032730 3300025940 Bacteria 4845
193 Ga0207691_10128572 3300025940 Unclassified 2239
194 Ga0207661_10001592 3300025944 Bacteria 15448
195 Ga0207679_10125460 3300025945 Unclassified 2051
196 Ga0207712_10004071 3300025961 Bacteria 9225
197 Ga0207668_10015382 3300025972 Bacteria 4754
198 Ga0207703_10005743 3300026035 Bacteria 9940
199 Ga0207708_10025932 3300026075 Bacteria 4434
200 Ga0207641_10003149 3300026088 Bacteria 14797
201 Ga0207683_10016201 3300026121 Bacteria 6344
202 Ga0207683_10056477 3300026121 Bacteria 3444
203 Ga0207698_10098252 3300026142 Bacteria 2419
204 Ga0268266_10032522 3300028379 Bacteria 4431
205 Ga0268266_10048284 3300028379 Bacteria 3648
206 Ga0268266_10136113 3300028379 Bacteria 2200
207 Ga0268264_10018323 3300028381 Bacteria 5725
208 Ga0265770_1003632 3300030878 Unclassified 2095
209 Ga0265760_10005658 3300031090 Bacteria 3576
210 Ga0373945_0014549 3300035116 Unclassified 2638
211 Ga0373956_0006856 3300035119 Bacteria 4573
212 Ga0373943_0006933 3300035170 Bacteria 5083
213 Ga0373955_0054258 3300035172 Bacteria 2191
214 Ga0373935_0001647 3300035692 Bacteria 12486
215 Ga0373935_0008706 3300035692 Bacteria 6078
216 Ga0373935_0068261 3300035692 Bacteria 2288
217 Ga0373927_0002943 3300035695 Bacteria 12369
218 Ga0373927_0032577 3300035695 Bacteria 3395
219 Ga0373927_0089146 3300035695 Bacteria 2003
220 Ga0373947_0020061 3300035725 Bacteria 3857
221 Ga0373947_0049620 3300035725 Bacteria 2521
222 Ga0373947_0050553 3300035725 Bacteria 2500
223 Ga0373947_0094045 3300035725 Unclassified 1874
224 Ga0373937_0017073 3300036401 Bacteria 6455
225 Ga0373925_0050575 3300037068 Bacteria 3100
226 Ga0395900_0012241 3300037418 Bacteria 8771
227 Ga0395898_0044041 3300037466 Bacteria 4396
228 Ga0395905_0046512 3300037471 Bacteria 4069
229 Ga0436364_0290176 3300037853 Bacteria 21314
230 Ga0395901_0031814 3300038443 Bacteria 5440
231 Ga0395901_0070743 3300038443 Bacteria 3635
232 Ga0395901_0148429 3300038443 Bacteria 2464
233 Ga0436365_0429772 3300039437 Bacteria 23182
234 Ga0436365_1027468 3300039437 Bacteria 4483
235 Ga0436365_1746520 3300039437 Bacteria 3096
236 Ga0436365_1913791 3300039437 Bacteria 42482
237 Ga0436362_0916974 3300039453 Bacteria 2184
238 Ga0439455_0008120 3300042012 Bacteria 2243
239 Ga0453683_0009759 3300044673 Bacteria 6400
240 Ga0495592_0047651 3300046454 Bacteria 3191
241 Ga0495592_0067549 3300046454 Unclassified 2612
242 Ga0495651_0036532 3300046462 Bacteria 3825
243 Ga0495580_0003809 3300046472 Bacteria 12776
244 Ga0495580_0018122 3300046472 Bacteria 5247
245 Ga0495582_0002967 3300046473 Bacteria 9504
246 Ga0495630_0044921 3300046517 Bacteria 3301
247 Ga0495666_0015576 3300046526 Bacteria 3785
248 Ga0495640_0022323 3300046533 Bacteria 4627
249 Ga0495598_0007365 3300046537 Unclassified 2522
250 Ga0495659_0006040 3300046664 Bacteria 3828
251 Ga0495599_0074349 3300046678 Bacteria 2121
252 Ga0495623_0065496 3300046679 Unclassified 2272
253 Ga0495646_0038524 3300046680 Bacteria 2951
254 Ga0495658_0005438 3300046683 Bacteria 6262
255 Ga0495658_0056223 3300046683 Bacteria 2243
256 Ga0495613_0085943 3300046689 Unclassified 2281
257 Ga0495581_0011754 3300047315 Bacteria 5068
258 Ga0495674_0019127 3300047319 Bacteria 6363
259 Ga0495674_0038504 3300047319 Bacteria 4291
260 Ga0495676_0016638 3300047321 Bacteria 6517
261 Ga0495675_0022920 3300047444 Bacteria 3980
262 Ga0496100_0069344 3300048903 Bacteria 2348
263 Ga0496102_0002864 3300048905 Bacteria 14652
264 Ga0496102_0140845 3300048905 Unclassified 2261
265 Ga0496103_0010173 3300048906 Bacteria 5562
266 Ga0496105_0090797 3300048908 Bacteria 2523
267 Ga0496106_0198892 3300048909 Unclassified 1595
268 Ga0496108_0003286 3300048911 Bacteria 12993
269 Ga0496109_0009765 3300048912 Bacteria 8190
270 Ga0496109_0093367 3300048912 Bacteria 2785
271 Ga0496109_0172949 3300048912 Bacteria 2027
272 Ga0496109_0173219 3300048912 Unclassified 2025
273 Ga0496110_0029952 3300048913 Bacteria 4689
274 Ga0496111_0057508 3300048914 Bacteria 2816
275 Ga0496112_0011962 3300048915 Bacteria 7954
276 Ga0496113_0051533 3300048916 Bacteria 3072
277 Ga0496114_0010549 3300048917 Bacteria 7352
278 Ga0496114_0120905 3300048917 Bacteria 2252
279 Ga0496115_0001278 3300048918 Bacteria 18007
280 Ga0496115_0005040 3300048918 Bacteria 9598
281 Ga0496115_0104652 3300048918 Unclassified 2323
282 Ga0496126_0000231 3300048929 Bacteria 120254
283 nmdc:mga05p37_199240_c1 3300050507 Bacteria 2426
284 nmdc:mga08x19_3528_c1 3300050514 Bacteria 9304
285 Ga0495601_0022700 3300053077 Bacteria 3855
286 Ga0105249_10064317
287 LJNas_1000186
288 JGI24035J26624_1000690
289 JGI25406J46586_10000001
290 Ga0065703_1019253
291 Ga0065712_10002023
292 Ga0065712_10006244
293 Ga0065712_10015876
294 Ga0065715_10001307
295 Ga0065715_10009348
296 Ga0065715_10095766
297 Ga0070676_10012733
298 Ga0070690_100114255
299 Ga0070670_100067752
300 Ga0070670_100087413
301 Ga0070666_10013647
302 Ga0070666_10096884
303 Ga0070689_100000264
304 Ga0070689_100045482
305 Ga0070687_100003763
306 Ga0070668_100053605
307 Ga0070668_100085005
308 Ga0070669_100025305
309 Ga0070675_100004640
310 Ga0070671_100018089
311 Ga0070671_100031059
312 Ga0070671_100094086
313 Ga0070674_100012210
314 Ga0070674_100063912
315 Ga0070673_100027022
316 Ga0070673_100080000
317 Ga0070688_100008983
318 Ga0070688_100056827
319 Ga0070659_100023306
320 Ga0070667_100184015
321 Ga0070709_10033554
322 Ga0070714_100006555
323 Ga0070714_100016675
324 Ga0070713_100000134
325 Ga0070713_100015409
326 Ga0070713_100107432
327 Ga0070710_10002880
328 Ga0070700_100015653
329 Ga0070694_100017143
330 Ga0070694_100036745
331 Ga0070708_100009496
332 Ga0070708_100016324
333 Ga0070708_100025232
334 Ga0070708_100073568
335 Ga0070708_100180108
336 Ga0070678_100018607
337 Ga0070678_100036185
338 Ga0070662_100046937
339 Ga0070681_10203314
340 Ga0070685_10011752
341 Ga0070706_100000011
342 Ga0070706_100004077
343 Ga0070706_100052347
344 Ga0070706_100110796
345 Ga0070707_100000989
346 Ga0070707_100001045
347 Ga0070707_100004588
348 Ga0070707_100040232
349 Ga0070707_100043385
350 Ga0070707_100134420
351 Ga0070698_100000837
352 Ga0070699_100009645
353 Ga0070699_100070696
354 Ga0070699_100127330
355 Ga0070679_100051761
356 Ga0070684_100000110
357 Ga0070697_100002724
358 Ga0070697_100015614
359 Ga0070697_100016417
360 Ga0070697_100024094
361 Ga0070697_100039082
362 Ga0070697_100039665
363 Ga0070697_100070508
364 Ga0070697_100079456
365 Ga0070697_100139310
366 Ga0070672_100048895
367 Ga0070672_100112511
368 Ga0070696_100009963
369 Ga0070665_100045970
370 Ga0070665_100045975
371 Ga0070665_100057360
372 Ga0070704_100000748
373 Ga0070704_100027459
374 Ga0068859_100101803
375 Ga0068861_100089383
376 Ga0068863_100008347
377 Ga0068863_100018699
378 Ga0068858_100006415
379 Ga0068860_100003526
380 Ga0081455_10000281
381 Ga0081455_10004438
382 Ga0081455_10006289
383 Ga0081455_10021776
384 Ga0081455_10057230
385 Ga0081455_10074567
386 Ga0081540_1000927
387 Ga0081539_10000014
388 Ga0081539_10000517
389 Ga0081539_10013645
390 Ga0081539_10019357
391 Ga0081539_10028737
392 Ga0070717_10001280
393 Ga0070717_10007133
394 Ga0070717_10025690
395 Ga0070717_10026090
396 Ga0070712_100000262
397 Ga0070712_100013517
398 Ga0070712_100086602
399 Ga0097621_100048957
400 Ga0075428_100059114
401 Ga0075430_100017323
402 Ga0075434_100006321
403 Ga0075436_100001444
404 Ga0097620_100101801
405 Ga0114129_10012621
406 Ga0105249_10002427
407 Ga0105239_10015761
408 Ga0105239_10029184
409 Ga0105239_10034525
410 Ga0157369_10184320
411 Ga0157374_10109597
412 Ga0157378_10025924
413 Ga0157378_10050961
414 Ga0157378_10104814
415 Ga0163162_10014591
416 Ga0163162_10045204
417 Ga0157372_10150252
418 Ga0157375_10001641
419 Ga0157375_10006194
420 Ga0157375_10032863
421 Ga0157375_10138289
422 Ga0157375_10217467
423 Ga0157375_10225231
424 Ga0157375_10248486
425 Ga0163163_10028461
426 Ga0163163_10045694
427 Ga0157377_10001754
428 Ga0157376_10000437
429 Ga0157376_10013680
430 Ga0157376_10017580
431 Ga0157376_10197389
432 Ga0213876_10000893
433 Ga0213876_10030212
434 Ga0207666_1000381
435 Ga0207673_1000249
436 Ga0207697_10000141
437 Ga0207697_10000440
438 Ga0207697_10002631
439 Ga0207697_10003547
440 Ga0207697_10007620
441 Ga0207680_10027252
442 Ga0207647_10002251
443 Ga0207685_10020020
444 Ga0207645_10018464
445 Ga0207645_10028551
446 Ga0207684_10000052
447 Ga0207684_10002065
448 Ga0207684_10012588
449 Ga0207684_10012949
450 Ga0207684_10060232
451 Ga0207693_10000275
452 Ga0207693_10007441
453 Ga0207693_10016499
454 Ga0207693_10024629
455 Ga0207693_10075682
456 Ga0207663_10004264
457 Ga0207663_10044068
458 Ga0207663_10090651
459 Ga0207662_10011496
460 Ga0207657_10036911
461 Ga0207652_10013365
462 Ga0207646_10000317
463 Ga0207646_10000653
464 Ga0207646_10001552
465 Ga0207646_10002190
466 Ga0207646_10031296
467 Ga0207646_10036908
468 Ga0207659_10055512
469 Ga0207700_10000111
470 Ga0207700_10041961
471 Ga0207670_10000380
472 Ga0207670_10123097
473 Ga0207669_10075670
474 Ga0207665_10042029
475 Ga0207665_10068905
476 Ga0207691_10001256
477 Ga0207691_10032730
478 Ga0207691_10128572
479 Ga0207661_10001592
480 Ga0207679_10125460
481 Ga0207712_10004071
482 Ga0207668_10015382
483 Ga0207703_10005743
484 Ga0207708_10025932
485 Ga0207641_10003149
486 Ga0207683_10016201
487 Ga0207683_10056477
488 Ga0207698_10098252
489 Ga0268266_10032522
490 Ga0268266_10048284
491 Ga0268266_10136113
492 Ga0268264_10018323
493 Ga0265770_1003632
494 Ga0265760_10005658
495 Ga0373945_0014549
496 Ga0373956_0006856
497 Ga0373943_0006933
498 Ga0373955_0054258
499 Ga0373935_0001647
500 Ga0373935_0008706
501 Ga0373935_0068261
502 Ga0373927_0002943
503 Ga0373927_0032577
504 Ga0373927_0089146
505 Ga0373947_0020061
506 Ga0373947_0049620
507 Ga0373947_0050553
508 Ga0373947_0094045
509 Ga0373937_0017073
510 Ga0373925_0050575
511 Ga0395900_0012241
512 Ga0395898_0044041
513 Ga0395905_0046512
514 Ga0436364_0290176
515 Ga0395901_0031814
516 Ga0395901_0070743
517 Ga0395901_0148429
518 Ga0436365_0429772
519 Ga0436365_1027468
520 Ga0436365_1746520
521 Ga0436365_1913791
522 Ga0436362_0916974
523 Ga0439455_0008120
524 Ga0453683_0009759
525 Ga0495592_0047651
526 Ga0495592_0067549
527 Ga0495651_0036532
528 Ga0495580_0003809
529 Ga0495580_0018122
530 Ga0495582_0002967
531 Ga0495630_0044921
532 Ga0495666_0015576
533 Ga0495640_0022323
534 Ga0495598_0007365
535 Ga0495659_0006040
536 Ga0495599_0074349
537 Ga0495623_0065496
538 Ga0495646_0038524
539 Ga0495658_0005438
540 Ga0495658_0056223
541 Ga0495613_0085943
542 Ga0495581_0011754
543 Ga0495674_0019127
544 Ga0495674_0038504
545 Ga0495676_0016638
546 Ga0495675_0022920
547 Ga0496100_0069344
548 Ga0496102_0002864
549 Ga0496102_0140845
550 Ga0496103_0010173
551 Ga0496105_0090797
552 Ga0496106_0198892
553 Ga0496108_0003286
554 Ga0496109_0009765
555 Ga0496109_0093367
556 Ga0496109_0172949
557 Ga0496109_0173219
558 Ga0496110_0029952
559 Ga0496111_0057508
560 Ga0496112_0011962
561 Ga0496113_0051533
562 Ga0496114_0010549
563 Ga0496114_0120905
564 Ga0496115_0001278
565 Ga0496115_0005040
566 Ga0496115_0104652
567 Ga0496126_0000231
568 nmdc:mga05p37_199240_c1
569 nmdc:mga08x19_3528_c1
570 Ga0495601_0022700

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05960

DUF885

Bacterial protein of unknown function (DUF885)

124

617

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.7301 25 555
3u24-assembly1.cif.gz_A the structure of a putative lipoprotein of unknown function from shewanella oneidensis. 0.7261 27 550
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.7205 27 555
3iuk-assembly1.cif.gz_A crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.7062 25 547
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.7059 26 547
ID Description Score Start End Superfamily
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.7027 60 546 1.10.1370.30
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.6195 60 546 1.10.1370.30
3g2eC00 Alpha Beta;3-Layer(aba) Sandwich;Pyruvate-ferredoxin Oxidoreductase; domain 3;Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.4745 448 504 3.40.920.10
af_Q6P3X3_676_843_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3489 66 229 1.25.40.10
af_A0A286YA76_825_961_1.20.120.230 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.3463 112 231 1.20.120.230
ID Description Score Start End GO Terms
AF-A0A2V5SSV9-F1-model_v4 DUF4440 domain-containing protein 0.9899 27 552
AF-A0A2V6JPM1-F1-model_v4 DUF885 domain-containing protein 0.9814 108 531
AF-E8X6D2-F1-model_v4 DUF885 domain-containing protein 0.9802 28 556
AF-A0A7U5BFJ3-F1-model_v4 DUF885 domain-containing protein 0.9786 28 554
AF-A0A838HRF1-F1-model_v4 DUF885 family protein 0.9786 44 559

Map