F385934

General Info

Members Datasets Scaffolds Average Seq Length
283 200 566 213

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2946072368|2946074783
Length 246
Sequence APSAVPSAATASVLDLTPAPVVPVVVVEDAADAAPLARALVAGGLPAIEVTLRTPAALDAIREISGAVPEAVVGAGTVITPEQVTACGAAGARFLVSPGWTDVLLTALLASGLPFLPGVSTTSEVVALLERGVREMKFFPAEAAGGAAYLRSLAGPLPQARFCPTGGIGPKNALGYLALPNVCCVGGSWMVPADAVADRDWPRIESLARTASALRTASALRTASAPGASSAPRTASALRAEGGTCR

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
9 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
20 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
21 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
22 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
30 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
31 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
32 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
33 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
34 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
35 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
36 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
37 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
38 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
39 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
40 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
41 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
42 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
43 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
44 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
45 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
46 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
47 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
48 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
49 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
50 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
51 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
52 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
53 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
54 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
55 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
56 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
57 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
58 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
59 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
60 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
61 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
62 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
63 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
67 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
68 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
69 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
74 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
77 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
83 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
86 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
87 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
88 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
89 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
90 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
91 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
92 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
93 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
94 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
95 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
96 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
97 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
98 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
99 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
108 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
109 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
113 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
119 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
123 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
126 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
127 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
128 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
132 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
133 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
134 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
135 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
152 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
153 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
154 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
155 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
156 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
157 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
158 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
159 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
160 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
161 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
162 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
163 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
164 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
165 2643221647 Streptomyces sp. Root369 Isolate Unclassified
166 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
167 2643221714 Streptomyces sp. Root264 Isolate Unclassified
168 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
169 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
170 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
171 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
172 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
173 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
174 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
175 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
176 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
177 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
178 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
179 2867428634 Streptomyces sp. RP5T Isolate Unclassified
180 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
181 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
182 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
183 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
184 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
185 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
186 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
187 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
188 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
189 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
190 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
191 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
192 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
193 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
194 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
195 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
196 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
197 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
198 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
199 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
200 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.51
Metatranscriptomes 0.35
Isolates 14.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.07
Nodule 0
Rhizoplane 0
Rhizosphere 75.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10032689 3300003320 Bacteria 2000
2 Ga0006562J51391_1037989 3300003578 Bacteria 1673
3 Ga0070675_100346305 3300005354 Bacteria 1317
4 Ga0070659_100054559 3300005366 Bacteria 3148
5 Ga0070667_100200173 3300005367 Bacteria 1772
6 Ga0070667_100982739 3300005367 Bacteria 787
7 Ga0070662_100096870 3300005457 Bacteria 2226
8 Ga0068853_100163175 3300005539 Bacteria 2012
9 Ga0070664_100007052 3300005564 Bacteria 9070
10 Ga0070664_100730843 3300005564 Bacteria 923
11 Ga0068854_100255807 3300005578 Bacteria 1400
12 Ga0068860_100513078 3300005843 Bacteria 1198
13 Ga0075365_10248789 3300006038 Bacteria 1249
14 Ga0075368_10007935 3300006042 Bacteria 3765
15 Ga0075363_100097827 3300006048 Bacteria 1622
16 Ga0075364_10299002 3300006051 Bacteria 1095
17 Ga0070715_10165596 3300006163 Bacteria 1096
18 Ga0075367_10005147 3300006178 Bacteria 6457
19 Ga0075367_10010319 3300006178 Bacteria 4904
20 Ga0075367_10506423 3300006178 Bacteria 766
21 Ga0075369_10020773 3300006186 Bacteria 2691
22 Ga0075370_10001283 3300006353 Bacteria 10725
23 Ga0075370_10061201 3300006353 Bacteria 2145
24 Ga0105246_10040988 3300011119 Bacteria 3128
25 Ga0163163_10174971 3300014325 Bacteria 2193
26 Ga0182007_10004529 3300015262 Bacteria 6283
27 Ga0207649_10526883 3300025920 Bacteria 901
28 Ga0207679_10025689 3300025945 Bacteria 4054
29 Ga0207640_10725158 3300025981 Bacteria 855
30 Ga0207658_10147068 3300025986 Bacteria 1915
31 Ga0207639_10201110 3300026041 Bacteria 1709
32 Ga0207678_10078753 3300026067 Bacteria 2822
33 Ga0268264_10367149 3300028381 Bacteria 1375
34 Ga0307517_10014340 3300028786 Bacteria 10653
35 Ga0307515_10000140 3300028794 Bacteria 172330
36 Ga0307515_10030439 3300028794 Bacteria 9062
37 Ga0307511_10000459 3300030521 Bacteria 44012
38 Ga0307511_10018949 3300030521 Bacteria 6561
39 Ga0307512_10001964 3300030522 Bacteria 27450
40 Ga0307512_10093406 3300030522 Bacteria 2082
41 Ga0307512_10186614 3300030522 Bacteria 1153
42 Ga0307513_10044854 3300031456 Bacteria 4838
43 Ga0307513_10057178 3300031456 Bacteria 4157
44 Ga0307509_10023942 3300031507 Bacteria 6844
45 Ga0307509_10032690 3300031507 Bacteria 5732
46 Ga0307509_10105435 3300031507 Bacteria 2840
47 Ga0307508_10049723 3300031616 Bacteria 3733
48 Ga0307508_10092846 3300031616 Bacteria 2608
49 Ga0307514_10026903 3300031649 Bacteria 4649
50 Ga0307514_10097360 3300031649 Bacteria 2123
51 Ga0307514_10208730 3300031649 Bacteria 1216
52 Ga0307516_10006189 3300031730 Bacteria 14086
53 Ga0307518_10060692 3300031838 Bacteria 2746
54 Ga0307518_10074722 3300031838 Bacteria 2451
55 Ga0307518_10134418 3300031838 Bacteria 1734
56 Ga0307409_100006614 3300031995 Bacteria 6837
57 Ga0307409_100198442 3300031995 Bacteria 1793
58 Ga0307414_10133157 3300032004 Bacteria 1933
59 Ga0307414_11140883 3300032004 Bacteria 721
60 Ga0307415_100023449 3300032126 Bacteria 3831
61 Ga0307415_100129671 3300032126 Bacteria 1906
62 Ga0307507_10016424 3300033179 Bacteria 8610
63 Ga0307507_10040631 3300033179 Bacteria 4668
64 Ga0307507_10081699 3300033179 Bacteria 2839
65 Ga0307510_10001802 3300033180 Bacteria 23942
66 Ga0307510_10142858 3300033180 Bacteria 2032
67 Ga0307510_10202630 3300033180 Bacteria 1517
68 Ga0307510_10284063 3300033180 Bacteria 1124
69 Ga0373945_0157141 3300035116 Bacteria 925
70 Ga0395898_0014003 3300037466 Bacteria 8242
71 Ga0439436_0020297 3300041404 Bacteria 1979
72 Ga0439439_0071365 3300041406 Bacteria 930
73 Ga0451853_0192867 3300041512 Bacteria 1705
74 Ga0451853_0297509 3300041512 Bacteria 2219
75 Ga0439433_0004301 3300041999 Bacteria 3065
76 Ga0439442_013085 3300042002 Bacteria 1702
77 Ga0439449_0000084 3300042007 Bacteria 30447
78 Ga0439449_0004420 3300042007 Bacteria 5420
79 Ga0439457_002585 3300042014 Bacteria 5118
80 Ga0439462_0028252 3300042015 Bacteria 1482
81 Ga0450903_000819 3300042138 Bacteria 6054
82 Ga0439458_0023120 3300042157 Bacteria 1448
83 Ga0439458_0026703 3300042157 Bacteria 1359
84 Ga0439458_0085161 3300042157 Bacteria 809
85 Ga0466972_0019457 3300044658 Bacteria 3394
86 Ga0466965_0260180 3300044683 Bacteria 932
87 Ga0466966_0264967 3300044684 Bacteria 1034
88 Ga0466961_0059444 3300044693 Bacteria 2431
89 Ga0466961_0179660 3300044693 Bacteria 1314
90 Ga0466963_0175421 3300044694 Bacteria 1495
91 Ga0466968_0245105 3300044735 Bacteria 850
92 Ga0466970_0198501 3300044765 Bacteria 1116
93 Ga0466970_0270135 3300044765 Bacteria 955
94 Ga0466960_0004373 3300044901 Bacteria 5518
95 Ga0466960_0011845 3300044901 Bacteria 3664
96 Ga0466967_0055831 3300045976 Bacteria 3480
97 Ga0466967_0062735 3300045976 Bacteria 3300
98 Ga0495592_0023843 3300046454 Bacteria 4654
99 Ga0495592_0442786 3300046454 Bacteria 815
100 Ga0495603_0000811 3300046455 Bacteria 17924
101 Ga0495603_0068345 3300046455 Bacteria 2090
102 Ga0495629_0015236 3300046459 Bacteria 5522
103 Ga0495629_0016592 3300046459 Bacteria 5286
104 Ga0495629_0097468 3300046459 Bacteria 2051
105 Ga0495629_0465912 3300046459 Bacteria 854
106 Ga0495638_0300175 3300046460 Bacteria 865
107 Ga0495651_0004157 3300046462 Bacteria 11088
108 Ga0495582_0009540 3300046473 Bacteria 5346
109 Ga0495582_0027586 3300046473 Bacteria 3114
110 Ga0495639_0018619 3300046475 Bacteria 3026
111 Ga0495662_0144684 3300046476 Bacteria 1170
112 Ga0495664_0007575 3300046477 Bacteria 6035
113 Ga0495664_0052534 3300046477 Bacteria 2422
114 Ga0495585_0048739 3300046492 Bacteria 2354
115 Ga0495594_0076824 3300046499 Bacteria 1862
116 Ga0495594_0303439 3300046499 Bacteria 909
117 Ga0495596_0097746 3300046500 Bacteria 1140
118 Ga0495607_0045749 3300046501 Bacteria 2572
119 Ga0495606_0050468 3300046507 Bacteria 2721
120 Ga0495610_0075031 3300046512 Bacteria 1567
121 Ga0495616_0015158 3300046513 Bacteria 4289
122 Ga0495618_0095374 3300046514 Bacteria 1902
123 Ga0495620_0011040 3300046515 Bacteria 4730
124 Ga0495628_0130614 3300046516 Bacteria 1921
125 Ga0495628_0441162 3300046516 Bacteria 946
126 Ga0495630_0153178 3300046517 Bacteria 1754
127 Ga0495631_0013698 3300046518 Bacteria 3928
128 Ga0495632_0060888 3300046519 Bacteria 1833
129 Ga0495637_0061694 3300046520 Bacteria 1536
130 Ga0495643_0074157 3300046522 Bacteria 1783
131 Ga0495666_0155617 3300046526 Bacteria 1061
132 Ga0495652_0021536 3300046529 Bacteria 5729
133 Ga0495652_0127076 3300046529 Bacteria 2024
134 Ga0495654_0150852 3300046530 Bacteria 1028
135 Ga0495640_0035056 3300046533 Bacteria 3554
136 Ga0495640_0061048 3300046533 Bacteria 2562
137 Ga0495640_0437931 3300046533 Bacteria 799
138 Ga0495586_0017882 3300046535 Bacteria 3771
139 Ga0495587_0009939 3300046536 Bacteria 6073
140 Ga0495609_0039286 3300046538 Bacteria 2131
141 Ga0495597_0054675 3300046542 Bacteria 1752
142 Ga0495622_0007609 3300046557 Bacteria 5029
143 Ga0495622_0152165 3300046557 Bacteria 1046
144 Ga0495633_0022105 3300046558 Bacteria 3170
145 Ga0495656_0088027 3300046615 Bacteria 1415
146 Ga0495668_0026305 3300046616 Bacteria 3302
147 Ga0495668_0071360 3300046616 Bacteria 1908
148 Ga0495634_0008797 3300046642 Bacteria 7486
149 Ga0495625_0072810 3300046660 Bacteria 2409
150 Ga0495625_0230747 3300046660 Bacteria 1209
151 Ga0495625_0308487 3300046660 Bacteria 1010
152 Ga0495635_0003182 3300046663 Bacteria 11310
153 Ga0495635_0237786 3300046663 Bacteria 1229
154 Ga0495661_0086731 3300046665 Bacteria 1791
155 Ga0495588_0068257 3300046674 Bacteria 1846
156 Ga0495657_0003462 3300046675 Bacteria 12871
157 Ga0495657_0011572 3300046675 Bacteria 6593
158 Ga0495657_0050349 3300046675 Bacteria 2800
159 Ga0495599_0306103 3300046678 Bacteria 958
160 Ga0495623_0048732 3300046679 Bacteria 2686
161 Ga0495646_0001907 3300046680 Bacteria 12538
162 Ga0495658_0197673 3300046683 Bacteria 1252
163 Ga0495613_0002464 3300046689 Bacteria 13948
164 Ga0495613_0069801 3300046689 Bacteria 2561
165 Ga0495613_0083647 3300046689 Bacteria 2317
166 Ga0495671_0091419 3300046692 Bacteria 1489
167 Ga0495649_0008980 3300046694 Bacteria 5975
168 Ga0495649_0102243 3300046694 Bacteria 1522
169 Ga0495649_0111856 3300046694 Bacteria 1448
170 Ga0495589_0101585 3300046794 Bacteria 1391
171 Ga0495589_0234615 3300046794 Bacteria 859
172 Ga0495600_0108854 3300046809 Bacteria 1804
173 Ga0495600_0184442 3300046809 Bacteria 1344
174 Ga0495581_0012923 3300047315 Bacteria 4839
175 Ga0495581_0357697 3300047315 Bacteria 852
176 Ga0495604_0001334 3300047317 Bacteria 20183
177 Ga0495604_0068118 3300047317 Bacteria 2702
178 Ga0495604_0078087 3300047317 Bacteria 2485
179 Ga0495674_0108120 3300047319 Bacteria 2360
180 Ga0495674_0158049 3300047319 Bacteria 1898
181 Ga0495672_0032396 3300047320 Bacteria 3252
182 Ga0495676_0016392 3300047321 Bacteria 6580
183 Ga0495676_0016970 3300047321 Bacteria 6447
184 Ga0495676_0064783 3300047321 Bacteria 2839
185 Ga0495680_0065137 3300047322 Bacteria 2792
186 Ga0495683_0040327 3300047323 Bacteria 2358
187 Ga0495687_002755 3300047443 Bacteria 13618
188 Ga0495687_028971 3300047443 Bacteria 2568
189 Ga0495687_055274 3300047443 Bacteria 1660
190 Ga0495675_0143574 3300047444 Bacteria 1478
191 Ga0495675_0175003 3300047444 Bacteria 1316
192 Ga0495677_0117431 3300047445 Bacteria 1013
193 Ga0495679_053254 3300047446 Bacteria 1209
194 Ga0495685_003702 3300047447 Bacteria 4890
195 Ga0495685_023124 3300047447 Bacteria 2139
196 Ga0495685_032797 3300047447 Bacteria 1785
197 Ga0495681_0000564 3300047470 Bacteria 28348
198 Ga0495681_0056544 3300047470 Bacteria 1825
199 Ga0495684_0104584 3300047471 Bacteria 2140
200 Ga0495684_0113177 3300047471 Bacteria 2046
201 Ga0495686_0021418 3300047472 Bacteria 4292
202 Ga0495686_0033360 3300047472 Bacteria 3324
203 Ga0495593_0004464 3300047673 Bacteria 8313
204 Ga0495593_0013836 3300047673 Bacteria 4596
205 Ga0495614_0029283 3300048089 Bacteria 2370
206 Ga0495614_0157656 3300048089 Bacteria 1014
207 Ga0495626_0232596 3300048091 Bacteria 744
208 Ga0495678_025750 3300049459 Bacteria 2522
209 Ga0501031_0008492 3300049568 Bacteria 6684
210 Ga0501032_0024837 3300049569 Bacteria 4134
211 Ga0501033_0016089 3300049570 Bacteria 5664
212 Ga0501033_0048681 3300049570 Bacteria 3147
213 Ga0501034_0016784 3300049571 Bacteria 7507
214 Ga0501034_0060354 3300049571 Bacteria 3809
215 Ga0501036_0149720 3300049572 Bacteria 1968
216 Ga0501037_0042198 3300049573 Bacteria 3353
217 Ga0501037_0062869 3300049573 Bacteria 2706
218 Ga0501039_0380774 3300049575 Bacteria 1108
219 Ga0501039_0467028 3300049575 Bacteria 991
220 Ga0501042_0051996 3300049578 Bacteria 2922
221 Ga0501043_0001155 3300049579 Bacteria 23219
222 Ga0501046_0034423 3300049580 Bacteria 4087
223 Ga0501047_0005680 3300049581 Bacteria 11741
224 Ga0501047_0029989 3300049581 Bacteria 5244
225 Ga0501047_0375944 3300049581 Bacteria 1255
226 Ga0501048_0008536 3300049582 Bacteria 7745
227 Ga0501070_0266123 3300049586 Bacteria 1401
228 Ga0501035_0023800 3300049822 Bacteria 5619
229 Ga0501044_0000952 3300049823 Bacteria 34736
230 Ga0501044_0017753 3300049823 Bacteria 7633
231 Ga0501044_0890248 3300049823 Bacteria 765
232 Ga0501045_0173995 3300049824 Bacteria 1604
233 nmdc:mga03n38_145833_c1 3300050490 Bacteria 1187
234 nmdc:mga03n38_26581_c1 3300050490 Bacteria 2004
235 nmdc:mga06z11_1191_c1 3300050494 Bacteria 9570
236 Ga0500610_0155112 3300053079 Bacteria 1144
237 Ga0495619_0082348 3300053085 Bacteria 2169
238 Ga0500644_0137353 3300053088 Bacteria 968
239 Ga0500560_085905 3300053107 Bacteria 1048
240 Ga0500572_053913 3300053111 Bacteria 1205
241 Ga0500564_180171 3300053138 Bacteria 882
242 Ga0500573_0036708 3300053140 Bacteria 2830
243 Ga0500624_057071 3300053157 Bacteria 738
244 2946074783 2946072368 Bacteria 8999607
245 2585308496 2582581313 Bacteria 10042643
246 2585313325 2582581314 Bacteria 11452267
247 2616694509 2616644814 Bacteria 11555299
248 2644268561 2643221647 Bacteria 10741251
249 2644435977 2643221678 Bacteria 9540101
250 2644632135 2643221714 Bacteria 9015452
251 2785344722 2784746763 Bacteria 9783172
252 2785368185 2784746768 Bacteria 10036182
253 2786669183 2786546132 Bacteria 10419719
254 2808840822 2808606359 Bacteria 9866990
255 2808919415 2808606375 Bacteria 9466072
256 2812335053 2811994874 Bacteria 5367947
257 2812481503 2811994917 Bacteria 7761064
258 2828305797 2828305725 Bacteria 4916900
259 2862295793 2862290372 Bacteria 7471434
260 2862513877 2862507626 Bacteria 9425308
261 2863405975 2863404153 Bacteria 9672205
262 2867434773 2867428634 Bacteria 9590268
263 2875393506 2875391855 Bacteria 7600475
264 2877682396 2877676314 Bacteria 9512378
265 2919468319 2919468124 Bacteria 9133025
266 2954004081 2954002825 Bacteria 9173742
267 2954387526 2954380949 Bacteria 10050426
268 2954675645 2954673503 Bacteria 9685905
269 2954688619 2954682443 Bacteria 9862841
270 2954698371 2954691527 Bacteria 10720516
271 2954703861 2954701450 Bacteria 10834262
272 2954717381 2954711539 Bacteria 10867210
273 2954727349 2954721474 Bacteria 10456478
274 2954734443 2954731030 Bacteria 10243860
275 2954746254 2954740390 Bacteria 10229294
276 2954753340 2954749733 Bacteria 10366972
277 2954765367 2954759201 Bacteria 9358192
278 2990060488 2990059506 Bacteria 9321252
279 3006394175 3006393351 Bacteria 6615579
280 3006501328 3006493962 Bacteria 8825450
281 8008579897 8008574985 Bacteria 7815457
282 8048136642 8048127548 Bacteria 11053136
283 8056836618 8056829672 Bacteria 9045328
284 rootH2_10032689
285 Ga0006562J51391_1037989
286 Ga0070675_100346305
287 Ga0070659_100054559
288 Ga0070667_100200173
289 Ga0070667_100982739
290 Ga0070662_100096870
291 Ga0068853_100163175
292 Ga0070664_100007052
293 Ga0070664_100730843
294 Ga0068854_100255807
295 Ga0068860_100513078
296 Ga0075365_10248789
297 Ga0075368_10007935
298 Ga0075363_100097827
299 Ga0075364_10299002
300 Ga0070715_10165596
301 Ga0075367_10005147
302 Ga0075367_10010319
303 Ga0075367_10506423
304 Ga0075369_10020773
305 Ga0075370_10001283
306 Ga0075370_10061201
307 Ga0105246_10040988
308 Ga0163163_10174971
309 Ga0182007_10004529
310 Ga0207649_10526883
311 Ga0207679_10025689
312 Ga0207640_10725158
313 Ga0207658_10147068
314 Ga0207639_10201110
315 Ga0207678_10078753
316 Ga0268264_10367149
317 Ga0307517_10014340
318 Ga0307515_10000140
319 Ga0307515_10030439
320 Ga0307511_10000459
321 Ga0307511_10018949
322 Ga0307512_10001964
323 Ga0307512_10093406
324 Ga0307512_10186614
325 Ga0307513_10044854
326 Ga0307513_10057178
327 Ga0307509_10023942
328 Ga0307509_10032690
329 Ga0307509_10105435
330 Ga0307508_10049723
331 Ga0307508_10092846
332 Ga0307514_10026903
333 Ga0307514_10097360
334 Ga0307514_10208730
335 Ga0307516_10006189
336 Ga0307518_10060692
337 Ga0307518_10074722
338 Ga0307518_10134418
339 Ga0307409_100006614
340 Ga0307409_100198442
341 Ga0307414_10133157
342 Ga0307414_11140883
343 Ga0307415_100023449
344 Ga0307415_100129671
345 Ga0307507_10016424
346 Ga0307507_10040631
347 Ga0307507_10081699
348 Ga0307510_10001802
349 Ga0307510_10142858
350 Ga0307510_10202630
351 Ga0307510_10284063
352 Ga0373945_0157141
353 Ga0395898_0014003
354 Ga0439436_0020297
355 Ga0439439_0071365
356 Ga0451853_0192867
357 Ga0451853_0297509
358 Ga0439433_0004301
359 Ga0439442_013085
360 Ga0439449_0000084
361 Ga0439449_0004420
362 Ga0439457_002585
363 Ga0439462_0028252
364 Ga0450903_000819
365 Ga0439458_0023120
366 Ga0439458_0026703
367 Ga0439458_0085161
368 Ga0466972_0019457
369 Ga0466965_0260180
370 Ga0466966_0264967
371 Ga0466961_0059444
372 Ga0466961_0179660
373 Ga0466963_0175421
374 Ga0466968_0245105
375 Ga0466970_0198501
376 Ga0466970_0270135
377 Ga0466960_0004373
378 Ga0466960_0011845
379 Ga0466967_0055831
380 Ga0466967_0062735
381 Ga0495592_0023843
382 Ga0495592_0442786
383 Ga0495603_0000811
384 Ga0495603_0068345
385 Ga0495629_0015236
386 Ga0495629_0016592
387 Ga0495629_0097468
388 Ga0495629_0465912
389 Ga0495638_0300175
390 Ga0495651_0004157
391 Ga0495582_0009540
392 Ga0495582_0027586
393 Ga0495639_0018619
394 Ga0495662_0144684
395 Ga0495664_0007575
396 Ga0495664_0052534
397 Ga0495585_0048739
398 Ga0495594_0076824
399 Ga0495594_0303439
400 Ga0495596_0097746
401 Ga0495607_0045749
402 Ga0495606_0050468
403 Ga0495610_0075031
404 Ga0495616_0015158
405 Ga0495618_0095374
406 Ga0495620_0011040
407 Ga0495628_0130614
408 Ga0495628_0441162
409 Ga0495630_0153178
410 Ga0495631_0013698
411 Ga0495632_0060888
412 Ga0495637_0061694
413 Ga0495643_0074157
414 Ga0495666_0155617
415 Ga0495652_0021536
416 Ga0495652_0127076
417 Ga0495654_0150852
418 Ga0495640_0035056
419 Ga0495640_0061048
420 Ga0495640_0437931
421 Ga0495586_0017882
422 Ga0495587_0009939
423 Ga0495609_0039286
424 Ga0495597_0054675
425 Ga0495622_0007609
426 Ga0495622_0152165
427 Ga0495633_0022105
428 Ga0495656_0088027
429 Ga0495668_0026305
430 Ga0495668_0071360
431 Ga0495634_0008797
432 Ga0495625_0072810
433 Ga0495625_0230747
434 Ga0495625_0308487
435 Ga0495635_0003182
436 Ga0495635_0237786
437 Ga0495661_0086731
438 Ga0495588_0068257
439 Ga0495657_0003462
440 Ga0495657_0011572
441 Ga0495657_0050349
442 Ga0495599_0306103
443 Ga0495623_0048732
444 Ga0495646_0001907
445 Ga0495658_0197673
446 Ga0495613_0002464
447 Ga0495613_0069801
448 Ga0495613_0083647
449 Ga0495671_0091419
450 Ga0495649_0008980
451 Ga0495649_0102243
452 Ga0495649_0111856
453 Ga0495589_0101585
454 Ga0495589_0234615
455 Ga0495600_0108854
456 Ga0495600_0184442
457 Ga0495581_0012923
458 Ga0495581_0357697
459 Ga0495604_0001334
460 Ga0495604_0068118
461 Ga0495604_0078087
462 Ga0495674_0108120
463 Ga0495674_0158049
464 Ga0495672_0032396
465 Ga0495676_0016392
466 Ga0495676_0016970
467 Ga0495676_0064783
468 Ga0495680_0065137
469 Ga0495683_0040327
470 Ga0495687_002755
471 Ga0495687_028971
472 Ga0495687_055274
473 Ga0495675_0143574
474 Ga0495675_0175003
475 Ga0495677_0117431
476 Ga0495679_053254
477 Ga0495685_003702
478 Ga0495685_023124
479 Ga0495685_032797
480 Ga0495681_0000564
481 Ga0495681_0056544
482 Ga0495684_0104584
483 Ga0495684_0113177
484 Ga0495686_0021418
485 Ga0495686_0033360
486 Ga0495593_0004464
487 Ga0495593_0013836
488 Ga0495614_0029283
489 Ga0495614_0157656
490 Ga0495626_0232596
491 Ga0495678_025750
492 Ga0501031_0008492
493 Ga0501032_0024837
494 Ga0501033_0016089
495 Ga0501033_0048681
496 Ga0501034_0016784
497 Ga0501034_0060354
498 Ga0501036_0149720
499 Ga0501037_0042198
500 Ga0501037_0062869
501 Ga0501039_0380774
502 Ga0501039_0467028
503 Ga0501042_0051996
504 Ga0501043_0001155
505 Ga0501046_0034423
506 Ga0501047_0005680
507 Ga0501047_0029989
508 Ga0501047_0375944
509 Ga0501048_0008536
510 Ga0501070_0266123
511 Ga0501035_0023800
512 Ga0501044_0000952
513 Ga0501044_0017753
514 Ga0501044_0890248
515 Ga0501045_0173995
516 nmdc:mga03n38_145833_c1
517 nmdc:mga03n38_26581_c1
518 nmdc:mga06z11_1191_c1
519 Ga0500610_0155112
520 Ga0495619_0082348
521 Ga0500644_0137353
522 Ga0500560_085905
523 Ga0500572_053913
524 Ga0500564_180171
525 Ga0500573_0036708
526 Ga0500624_057071
527 2946074783
528 2585308496
529 2585313325
530 2616694509
531 2644268561
532 2644435977
533 2644632135
534 2785344722
535 2785368185
536 2786669183
537 2808840822
538 2808919415
539 2812335053
540 2812481503
541 2828305797
542 2862295793
543 2862513877
544 2863405975
545 2867434773
546 2875393506
547 2877682396
548 2919468319
549 2954004081
550 2954387526
551 2954675645
552 2954688619
553 2954698371
554 2954703861
555 2954717381
556 2954727349
557 2954734443
558 2954746254
559 2954753340
560 2954765367
561 2990060488
562 3006394175
563 3006501328
564 8008579897
565 8048136642
566 8056836618

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01081

Aldolase

KDPG and KHG aldolase

14

207

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1eua-assembly1.cif.gz_B schiff base intermediate in kdpg aldolase from escherichia coli 0.9745 20 218
2c0a-assembly1.cif.gz_B mechanism of the class i kdpg aldolase 0.9743 20 218
6ovi-assembly1.cif.gz_B crystal structure of kdpg aldolase from legionella pneumophila with pyruvate captured at low ph as a covalent carbinolamine intermediate 0.9726 20 216
1fwr-assembly1.cif.gz_C crystal structure of kdpg aldolase double mutant k133q/t161k 0.9716 20 218
1mxs-assembly1.cif.gz_A crystal structure of 2-keto-3-deoxy-6-phosphogluconate (kdpg) aldolase from pseudomonas putida. 0.9688 20 218
ID Description Score Start End Superfamily
1mxsA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9688 20 218 3.20.20.70
4bk9A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9666 20 221 3.20.20.70
1vhcB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9562 24 218 3.20.20.70
3vcrA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9497 21 218 3.20.20.70
2yw3A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9301 20 219 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A5M8GNG0-F1-model_v4 deleted 0.9948 20 218
AF-A0A6B3IUW6-F1-model_v4 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) 0.9944 22 149 GO:0008675
AF-A0A7K2N8V3-F1-model_v4 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) 0.9936 17 217 GO:0008675
AF-A0A1Z2L7V4-F1-model_v4 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) 0.9935 18 219 GO:0008675
AF-A0A1E7K1Z0-F1-model_v4 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) 0.9933 18 218 GO:0008675

Map