F385930

General Info

Members Datasets Scaffolds Average Seq Length
283 189 566 251

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862290372|2862292029
Length 293
Sequence RGDRTNGPDRAASSPSGPVPALDRAETADVPASGPPTTTPTTDAALARWTALRDGAVLLDGFHALKHALRFDAHVATALTSDLQAVRALADELAPDVADAVAEAATEVPAAVLRELLPRLHPTGIAALAARPARADNLAALTRTPRTAPVVVLDNPRNLGNAGAVIRLAAGFGATGVVTTGTLDPWHPNVVRGAAGLHYATAVEHLPVDALPAGPLYALDPEGEDIRTLELPDDALLAFGSERSGITDELRARADALVSLPMRPQVSSYNLATSVGMALFHWSAAGWSAAGGR

Samples

Sample ID Description Type Environment
1 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
9 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
10 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
11 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
12 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
15 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
16 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
17 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
18 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
19 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
23 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
24 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
26 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
27 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
28 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
29 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
30 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
31 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
32 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
33 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
34 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
35 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
36 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
37 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
38 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
39 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
40 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
41 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
42 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
43 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
44 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
45 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
46 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
47 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
48 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
49 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
50 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
51 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
52 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
53 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
54 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
55 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
56 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
57 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
58 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
59 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
60 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
61 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
62 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
63 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
64 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
65 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
68 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
69 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
74 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
75 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
76 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
77 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
83 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
86 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
89 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
92 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
93 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
94 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
95 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
96 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
97 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
98 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
101 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
102 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
103 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
114 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
119 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
144 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
145 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
146 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
147 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
148 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
149 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
150 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
151 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
152 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
153 2643221647 Streptomyces sp. Root369 Isolate Unclassified
154 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
155 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
156 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
157 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
158 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
159 2808606448 Streptomyces sp. 193411 Isolate Unclassified
160 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
161 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
162 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
163 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
164 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
165 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
166 2862574272 Streptomyces sp. AcE210 Isolate Nodule
167 2867428634 Streptomyces sp. RP5T Isolate Unclassified
168 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
169 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
170 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
171 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
172 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
173 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
174 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
175 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
176 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
177 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
178 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
179 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
180 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
181 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
182 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
183 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
184 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
185 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
186 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
187 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
188 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
189 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.45
Metatranscriptomes 0.71
Isolates 14.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.83
Nodule 0.71
Rhizoplane 1.06
Rhizosphere 80.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24738J21930_10011226 3300002075 Bacteria 1973
2 rootL2_10026351 3300003322 Bacteria 3843
3 rootL2_10133531 3300003322 Bacteria 1313
4 rootL2_10133538 3300003322 Bacteria 1631
5 rootH1_10007551 3300003323 Bacteria 4500
6 rootH1_10016181 3300003323 Bacteria 1344
7 Ga0006562J51391_1171375 3300003578 Bacteria 5366
8 Ga0006562J51391_1171376 3300003578 Bacteria 5290
9 Ga0070708_100722224 3300005445 Bacteria 937
10 Ga0068855_100285264 3300005563 Bacteria 1832
11 Ga0068856_100050552 3300005614 Bacteria 4098
12 Ga0068852_100612131 3300005616 Bacteria 1094
13 Ga0075367_10002634 3300006178 Bacteria 8253
14 Ga0075430_100293015 3300006846 Bacteria 1346
15 Ga0105251_10004396 3300009011 Bacteria 9603
16 Ga0105250_10023726 3300009092 Bacteria 2473
17 Ga0105243_10772797 3300009148 Bacteria 944
18 Ga0105246_10002936 3300011119 Bacteria 10318
19 Ga0157372_10094303 3300013307 Bacteria 3408
20 Ga0182007_10018049 3300015262 Bacteria 2565
21 Ga0183367_1008 3300015688 Bacteria 490626
22 Ga0209758_1011148 3300025297 Bacteria 5248
23 Ga0207647_10016998 3300025904 Bacteria 4953
24 Ga0207686_10419341 3300025934 Bacteria 1023
25 Ga0207702_10134515 3300026078 Bacteria 2229
26 Ga0209371_1010249 3300027312 Bacteria 2899
27 Ga0209813_10002520 3300027866 Bacteria 4196
28 Ga0268266_10251392 3300028379 Bacteria 1635
29 Ga0307517_10010824 3300028786 Bacteria 12716
30 Ga0307515_10003050 3300028794 Bacteria 35485
31 Ga0268256_1008422 3300030500 Bacteria 3533
32 Ga0307511_10000542 3300030521 Bacteria 40449
33 Ga0307512_10001246 3300030522 Bacteria 36723
34 Ga0307509_10025134 3300031507 Bacteria 6656
35 Ga0307509_10047345 3300031507 Bacteria 4626
36 Ga0307509_10065555 3300031507 Bacteria 3813
37 Ga0307508_10003598 3300031616 Bacteria 15582
38 Ga0307508_10031080 3300031616 Bacteria 4828
39 Ga0307508_10120710 3300031616 Bacteria 2223
40 Ga0307514_10009095 3300031649 Bacteria 8386
41 Ga0307514_10037426 3300031649 Bacteria 3847
42 Ga0307514_10304349 3300031649 Bacteria 890
43 Ga0307516_10002653 3300031730 Bacteria 23673
44 Ga0307516_10320947 3300031730 Bacteria 1220
45 Ga0307518_10029402 3300031838 Bacteria 3976
46 Ga0307507_10033929 3300033179 Bacteria 5287
47 Ga0307507_10110771 3300033179 Bacteria 2245
48 Ga0307510_10013861 3300033180 Bacteria 9551
49 Ga0307510_10058028 3300033180 Bacteria 4011
50 Ga0307510_10098160 3300033180 Bacteria 2734
51 Ga0307510_10124905 3300033180 Bacteria 2265
52 Ga0395900_0563862 3300037418 Bacteria 1082
53 Ga0395898_0003641 3300037466 Bacteria 17130
54 Ga0395898_0021020 3300037466 Bacteria 6621
55 Ga0395898_0364329 3300037466 Bacteria 1378
56 Ga0395901_0049314 3300038443 Bacteria 4374
57 Ga0395901_0122033 3300038443 Bacteria 2739
58 Ga0439439_0003637 3300041406 Bacteria 3416
59 Ga0451853_2184133 3300041512 Bacteria 1906
60 Ga0439433_0001449 3300041999 Bacteria 4901
61 Ga0439448_0001828 3300042005 Bacteria 5633
62 Ga0439449_0015201 3300042007 Bacteria 2891
63 Ga0439449_0028477 3300042007 Bacteria 2082
64 Ga0439455_0006701 3300042012 Bacteria 2403
65 Ga0439457_000196 3300042014 Bacteria 15966
66 Ga0439457_003227 3300042014 Bacteria 4480
67 Ga0439462_0039173 3300042015 Bacteria 1263
68 Ga0450894_000206 3300042131 Bacteria 10605
69 Ga0450898_002195 3300042134 Bacteria 2709
70 Ga0450899_001037 3300042135 Bacteria 3158
71 Ga0450903_002577 3300042138 Bacteria 3209
72 Ga0450906_021201 3300042145 Bacteria 1162
73 Ga0466969_0027393 3300044656 Bacteria 2918
74 Ga0466972_0004448 3300044658 Bacteria 7010
75 Ga0466972_0030748 3300044658 Bacteria 2643
76 Ga0466965_0000060 3300044683 Bacteria 34483
77 Ga0466965_0004845 3300044683 Bacteria 6004
78 Ga0466965_0008689 3300044683 Bacteria 4703
79 Ga0466966_0002325 3300044684 Bacteria 12395
80 Ga0466961_0002088 3300044693 Bacteria 12452
81 Ga0466961_0019470 3300044693 Bacteria 4366
82 Ga0466963_0002015 3300044694 Bacteria 11165
83 Ga0466963_0057046 3300044694 Bacteria 2600
84 Ga0466964_0001119 3300044706 Bacteria 9012
85 Ga0466968_0197497 3300044735 Bacteria 941
86 Ga0466970_0007548 3300044765 Bacteria 5454
87 Ga0466957_0007149 3300044842 Bacteria 6311
88 Ga0466957_0014677 3300044842 Bacteria 4564
89 Ga0466960_0008118 3300044901 Bacteria 4289
90 Ga0466960_0010229 3300044901 Bacteria 3894
91 Ga0466959_0002534 3300045049 Bacteria 11720
92 Ga0466958_0000503 3300045836 Bacteria 16423
93 Ga0466958_0203535 3300045836 Bacteria 1260
94 Ga0466967_0000426 3300045976 Bacteria 20050
95 Ga0466967_0230124 3300045976 Bacteria 1765
96 Ga0495627_007081 3300046453 Bacteria 4343
97 Ga0495629_0007975 3300046459 Bacteria 7789
98 Ga0495629_0017388 3300046459 Bacteria 5153
99 Ga0495629_0038224 3300046459 Bacteria 3381
100 Ga0495651_0004401 3300046462 Bacteria 10788
101 Ga0495582_0025268 3300046473 Bacteria 3254
102 Ga0495639_0017556 3300046475 Bacteria 3109
103 Ga0495662_0002327 3300046476 Bacteria 9578
104 Ga0495662_0009046 3300046476 Bacteria 4891
105 Ga0495664_0000984 3300046477 Bacteria 14646
106 Ga0495594_0006289 3300046499 Bacteria 6108
107 Ga0495594_0019339 3300046499 Bacteria 3617
108 Ga0495594_0043473 3300046499 Bacteria 2462
109 Ga0495594_0102117 3300046499 Bacteria 1613
110 Ga0495596_0026529 3300046500 Bacteria 2334
111 Ga0495583_0070609 3300046506 Bacteria 1535
112 Ga0495606_0038494 3300046507 Bacteria 3234
113 Ga0495618_0079465 3300046514 Bacteria 2092
114 Ga0495618_0097111 3300046514 Bacteria 1884
115 Ga0495620_0005570 3300046515 Bacteria 7018
116 Ga0495620_0038220 3300046515 Bacteria 2131
117 Ga0495620_0050094 3300046515 Bacteria 1784
118 Ga0495628_0012497 3300046516 Bacteria 7157
119 Ga0495630_0002881 3300046517 Bacteria 11951
120 Ga0495630_0325939 3300046517 Bacteria 1174
121 Ga0495631_0016097 3300046518 Bacteria 3573
122 Ga0495637_0037060 3300046520 Bacteria 2120
123 Ga0495643_0021837 3300046522 Bacteria 3663
124 Ga0495643_0158298 3300046522 Bacteria 1116
125 Ga0495648_0082576 3300046524 Bacteria 1823
126 Ga0495666_0098596 3300046526 Bacteria 1377
127 Ga0495652_0018976 3300046529 Bacteria 6127
128 Ga0495652_0024100 3300046529 Bacteria 5389
129 Ga0495654_0047736 3300046530 Bacteria 2103
130 Ga0495640_0034774 3300046533 Bacteria 3568
131 Ga0495640_0084933 3300046533 Bacteria 2098
132 Ga0495645_0051820 3300046543 Bacteria 2986
133 Ga0495645_0304561 3300046543 Bacteria 1040
134 Ga0495633_0027319 3300046558 Bacteria 2790
135 Ga0495633_0038518 3300046558 Bacteria 2283
136 Ga0495634_0002279 3300046642 Bacteria 16055
137 Ga0495625_0269337 3300046660 Bacteria 1099
138 Ga0495635_0008560 3300046663 Bacteria 7144
139 Ga0495635_0074077 3300046663 Bacteria 2332
140 Ga0495661_0056806 3300046665 Bacteria 2339
141 Ga0495588_0020168 3300046674 Bacteria 3272
142 Ga0495657_0001638 3300046675 Bacteria 19231
143 Ga0495657_0028716 3300046675 Bacteria 3908
144 Ga0495646_0004157 3300046680 Bacteria 9090
145 Ga0495613_0004563 3300046689 Bacteria 10390
146 Ga0495613_0036674 3300046689 Bacteria 3635
147 Ga0495613_0044411 3300046689 Bacteria 3288
148 Ga0495613_0048335 3300046689 Bacteria 3141
149 Ga0495624_0158235 3300046690 Bacteria 1384
150 Ga0495670_0047592 3300046691 Bacteria 2144
151 Ga0495670_0062681 3300046691 Bacteria 1871
152 Ga0495649_0017920 3300046694 Bacteria 3990
153 Ga0495589_0027712 3300046794 Bacteria 2863
154 Ga0495589_0028488 3300046794 Bacteria 2818
155 Ga0495589_0039712 3300046794 Bacteria 2351
156 Ga0495589_0105242 3300046794 Bacteria 1363
157 Ga0495600_0004162 3300046809 Bacteria 8623
158 Ga0495600_0087590 3300046809 Bacteria 2031
159 Ga0495581_0002023 3300047315 Bacteria 11399
160 Ga0495581_0136217 3300047315 Bacteria 1431
161 Ga0495604_0000211 3300047317 Bacteria 53509
162 Ga0495636_0000731 3300047318 Bacteria 12056
163 Ga0495636_0001273 3300047318 Bacteria 9552
164 Ga0495636_0013080 3300047318 Bacteria 3291
165 Ga0495636_0162684 3300047318 Bacteria 1006
166 Ga0495674_0100693 3300047319 Bacteria 2459
167 Ga0495674_0175205 3300047319 Bacteria 1788
168 Ga0495676_0016834 3300047321 Bacteria 6473
169 Ga0495676_0024935 3300047321 Bacteria 5167
170 Ga0495680_0003493 3300047322 Bacteria 15431
171 Ga0495687_001906 3300047443 Bacteria 17911
172 Ga0495687_005012 3300047443 Bacteria 8641
173 Ga0495687_021538 3300047443 Bacteria 3115
174 Ga0495687_054427 3300047443 Bacteria 1679
175 Ga0495675_0025519 3300047444 Bacteria 3767
176 Ga0495675_0025657 3300047444 Bacteria 3756
177 Ga0495685_006427 3300047447 Bacteria 3846
178 Ga0495685_011108 3300047447 Bacteria 3031
179 Ga0495685_011933 3300047447 Bacteria 2939
180 Ga0495681_0016699 3300047470 Bacteria 4102
181 Ga0495681_0039188 3300047470 Bacteria 2316
182 Ga0495684_0194625 3300047471 Bacteria 1497
183 Ga0495686_0110698 3300047472 Bacteria 1647
184 Ga0495593_0002687 3300047673 Bacteria 10697
185 Ga0495614_0002226 3300048089 Bacteria 8596
186 Ga0495614_0033847 3300048089 Bacteria 2197
187 Ga0495614_0147292 3300048089 Bacteria 1049
188 Ga0495626_0040150 3300048091 Bacteria 2211
189 Ga0496108_0139452 3300048911 Bacteria 2089
190 Ga0496109_0034076 3300048912 Bacteria 4583
191 Ga0496111_0548520 3300048914 Bacteria 849
192 Ga0501031_0006384 3300049568 Bacteria 7690
193 Ga0501031_0290235 3300049568 Bacteria 1061
194 Ga0501032_0019479 3300049569 Bacteria 4746
195 Ga0501033_0001480 3300049570 Bacteria 20793
196 Ga0501033_0001506 3300049570 Bacteria 20631
197 Ga0501033_0019215 3300049570 Bacteria 5166
198 Ga0501034_0006298 3300049571 Bacteria 12772
199 Ga0501034_0021032 3300049571 Bacteria 6660
200 Ga0501034_0047346 3300049571 Bacteria 4342
201 Ga0501034_0052087 3300049571 Bacteria 4125
202 Ga0501036_0006440 3300049572 Bacteria 9536
203 Ga0501036_0048792 3300049572 Bacteria 3584
204 Ga0501037_0001923 3300049573 Bacteria 15061
205 Ga0501037_0195415 3300049573 Bacteria 1431
206 Ga0501038_0168464 3300049574 Bacteria 1775
207 Ga0501038_0357237 3300049574 Bacteria 1137
208 Ga0501038_0411139 3300049574 Bacteria 1045
209 Ga0501039_0003601 3300049575 Bacteria 11615
210 Ga0501039_0204232 3300049575 Bacteria 1554
211 Ga0501042_0044651 3300049578 Bacteria 3158
212 Ga0501043_0001557 3300049579 Bacteria 19966
213 Ga0501043_0073630 3300049579 Bacteria 2683
214 Ga0501046_0003702 3300049580 Bacteria 14000
215 Ga0501046_0351886 3300049580 Bacteria 1069
216 Ga0501047_0000075 3300049581 Bacteria 124995
217 Ga0501047_0007963 3300049581 Bacteria 9993
218 Ga0501047_0025302 3300049581 Bacteria 5704
219 Ga0501047_0040097 3300049581 Bacteria 4529
220 Ga0501047_0134223 3300049581 Bacteria 2355
221 Ga0501048_0020695 3300049582 Bacteria 4822
222 Ga0501068_0119238 3300049584 Bacteria 1644
223 Ga0501070_0003406 3300049586 Bacteria 13796
224 Ga0501070_0069398 3300049586 Bacteria 2918
225 Ga0501070_0336964 3300049586 Bacteria 1225
226 Ga0501074_0008427 3300049590 Bacteria 7476
227 Ga0501080_0225751 3300049742 Bacteria 1713
228 Ga0501035_0000852 3300049822 Bacteria 32539
229 Ga0501035_0043240 3300049822 Bacteria 4060
230 Ga0501035_0190096 3300049822 Bacteria 1765
231 Ga0501044_0016513 3300049823 Bacteria 7924
232 Ga0501044_0040556 3300049823 Bacteria 4851
233 Ga0501044_0074370 3300049823 Bacteria 3452
234 Ga0501044_0106560 3300049823 Bacteria 2815
235 nmdc:mga06z11_16529_c1 3300050494 Bacteria 3326
236 nmdc:mga04h51_2797_c1 3300050495 Bacteria 4168
237 Ga0495655_0098515 3300053083 Bacteria 862
238 Ga0500583_0112505 3300053092 Bacteria 1342
239 Ga0500640_004395 3300053095 Bacteria 5113
240 Ga0500624_002335 3300053157 Bacteria 2588
241 Ga0466962_0002713 3300061719 Bacteria 8414
242 2862292029 2862290372 Bacteria 7471434
243 2547406175 2547132111 Bacteria 8013147
244 2585305683 2582581313 Bacteria 10042643
245 2585312615 2582581314 Bacteria 11452267
246 2644262799 2643221647 Bacteria 10741251
247 2784589100 2784132148 Bacteria 8627943
248 2785342748 2784746763 Bacteria 9783172
249 2786671133 2786546132 Bacteria 10419719
250 2808842568 2808606359 Bacteria 9866990
251 2808921074 2808606375 Bacteria 9466072
252 2809232702 2808606448 Bacteria 8656184
253 2812357547 2811994879 Bacteria 9313447
254 2812480057 2811994917 Bacteria 7761064
255 2852637379 2852635781 Bacteria 8251373
256 2862286161 2862281513 Bacteria 9621493
257 2862389712 2862382967 Bacteria 10317375
258 2862516402 2862507626 Bacteria 9425308
259 2862578754 2862574272 Bacteria 10567477
260 2867432668 2867428634 Bacteria 9590268
261 2873155250 2873151551 Bacteria 8625867
262 2912724031 2912723979 Bacteria 8557534
263 2912731498 2912723979 Bacteria 8557534
264 2919475524 2919468124 Bacteria 9133025
265 2946068328 2946064051 Bacteria 8957905
266 2947228579 2947224130 Bacteria 9938529
267 2954006944 2954002825 Bacteria 9173742
268 2954385685 2954380949 Bacteria 10050426
269 2954677465 2954673503 Bacteria 9685905
270 2954686689 2954682443 Bacteria 9862841
271 2954696335 2954691527 Bacteria 10720516
272 2954715701 2954711539 Bacteria 10867210
273 2954725638 2954721474 Bacteria 10456478
274 2954736174 2954731030 Bacteria 10243860
275 2954744577 2954740390 Bacteria 10229294
276 2954755021 2954749733 Bacteria 10366972
277 2954763560 2954759201 Bacteria 9358192
278 3006398093 3006393351 Bacteria 6615579
279 3006488550 3006486233 Bacteria 8157040
280 3006499482 3006493962 Bacteria 8825450
281 8008578405 8008574985 Bacteria 7815457
282 8023625204 8023623736 Bacteria 8593882
283 8056837963 8056829672 Bacteria 9045328
284 JGI24738J21930_10011226
285 rootL2_10026351
286 rootL2_10133531
287 rootL2_10133538
288 rootH1_10007551
289 rootH1_10016181
290 Ga0006562J51391_1171375
291 Ga0006562J51391_1171376
292 Ga0070708_100722224
293 Ga0068855_100285264
294 Ga0068856_100050552
295 Ga0068852_100612131
296 Ga0075367_10002634
297 Ga0075430_100293015
298 Ga0105251_10004396
299 Ga0105250_10023726
300 Ga0105243_10772797
301 Ga0105246_10002936
302 Ga0157372_10094303
303 Ga0182007_10018049
304 Ga0183367_1008
305 Ga0209758_1011148
306 Ga0207647_10016998
307 Ga0207686_10419341
308 Ga0207702_10134515
309 Ga0209371_1010249
310 Ga0209813_10002520
311 Ga0268266_10251392
312 Ga0307517_10010824
313 Ga0307515_10003050
314 Ga0268256_1008422
315 Ga0307511_10000542
316 Ga0307512_10001246
317 Ga0307509_10025134
318 Ga0307509_10047345
319 Ga0307509_10065555
320 Ga0307508_10003598
321 Ga0307508_10031080
322 Ga0307508_10120710
323 Ga0307514_10009095
324 Ga0307514_10037426
325 Ga0307514_10304349
326 Ga0307516_10002653
327 Ga0307516_10320947
328 Ga0307518_10029402
329 Ga0307507_10033929
330 Ga0307507_10110771
331 Ga0307510_10013861
332 Ga0307510_10058028
333 Ga0307510_10098160
334 Ga0307510_10124905
335 Ga0395900_0563862
336 Ga0395898_0003641
337 Ga0395898_0021020
338 Ga0395898_0364329
339 Ga0395901_0049314
340 Ga0395901_0122033
341 Ga0439439_0003637
342 Ga0451853_2184133
343 Ga0439433_0001449
344 Ga0439448_0001828
345 Ga0439449_0015201
346 Ga0439449_0028477
347 Ga0439455_0006701
348 Ga0439457_000196
349 Ga0439457_003227
350 Ga0439462_0039173
351 Ga0450894_000206
352 Ga0450898_002195
353 Ga0450899_001037
354 Ga0450903_002577
355 Ga0450906_021201
356 Ga0466969_0027393
357 Ga0466972_0004448
358 Ga0466972_0030748
359 Ga0466965_0000060
360 Ga0466965_0004845
361 Ga0466965_0008689
362 Ga0466966_0002325
363 Ga0466961_0002088
364 Ga0466961_0019470
365 Ga0466963_0002015
366 Ga0466963_0057046
367 Ga0466964_0001119
368 Ga0466968_0197497
369 Ga0466970_0007548
370 Ga0466957_0007149
371 Ga0466957_0014677
372 Ga0466960_0008118
373 Ga0466960_0010229
374 Ga0466959_0002534
375 Ga0466958_0000503
376 Ga0466958_0203535
377 Ga0466967_0000426
378 Ga0466967_0230124
379 Ga0495627_007081
380 Ga0495629_0007975
381 Ga0495629_0017388
382 Ga0495629_0038224
383 Ga0495651_0004401
384 Ga0495582_0025268
385 Ga0495639_0017556
386 Ga0495662_0002327
387 Ga0495662_0009046
388 Ga0495664_0000984
389 Ga0495594_0006289
390 Ga0495594_0019339
391 Ga0495594_0043473
392 Ga0495594_0102117
393 Ga0495596_0026529
394 Ga0495583_0070609
395 Ga0495606_0038494
396 Ga0495618_0079465
397 Ga0495618_0097111
398 Ga0495620_0005570
399 Ga0495620_0038220
400 Ga0495620_0050094
401 Ga0495628_0012497
402 Ga0495630_0002881
403 Ga0495630_0325939
404 Ga0495631_0016097
405 Ga0495637_0037060
406 Ga0495643_0021837
407 Ga0495643_0158298
408 Ga0495648_0082576
409 Ga0495666_0098596
410 Ga0495652_0018976
411 Ga0495652_0024100
412 Ga0495654_0047736
413 Ga0495640_0034774
414 Ga0495640_0084933
415 Ga0495645_0051820
416 Ga0495645_0304561
417 Ga0495633_0027319
418 Ga0495633_0038518
419 Ga0495634_0002279
420 Ga0495625_0269337
421 Ga0495635_0008560
422 Ga0495635_0074077
423 Ga0495661_0056806
424 Ga0495588_0020168
425 Ga0495657_0001638
426 Ga0495657_0028716
427 Ga0495646_0004157
428 Ga0495613_0004563
429 Ga0495613_0036674
430 Ga0495613_0044411
431 Ga0495613_0048335
432 Ga0495624_0158235
433 Ga0495670_0047592
434 Ga0495670_0062681
435 Ga0495649_0017920
436 Ga0495589_0027712
437 Ga0495589_0028488
438 Ga0495589_0039712
439 Ga0495589_0105242
440 Ga0495600_0004162
441 Ga0495600_0087590
442 Ga0495581_0002023
443 Ga0495581_0136217
444 Ga0495604_0000211
445 Ga0495636_0000731
446 Ga0495636_0001273
447 Ga0495636_0013080
448 Ga0495636_0162684
449 Ga0495674_0100693
450 Ga0495674_0175205
451 Ga0495676_0016834
452 Ga0495676_0024935
453 Ga0495680_0003493
454 Ga0495687_001906
455 Ga0495687_005012
456 Ga0495687_021538
457 Ga0495687_054427
458 Ga0495675_0025519
459 Ga0495675_0025657
460 Ga0495685_006427
461 Ga0495685_011108
462 Ga0495685_011933
463 Ga0495681_0016699
464 Ga0495681_0039188
465 Ga0495684_0194625
466 Ga0495686_0110698
467 Ga0495593_0002687
468 Ga0495614_0002226
469 Ga0495614_0033847
470 Ga0495614_0147292
471 Ga0495626_0040150
472 Ga0496108_0139452
473 Ga0496109_0034076
474 Ga0496111_0548520
475 Ga0501031_0006384
476 Ga0501031_0290235
477 Ga0501032_0019479
478 Ga0501033_0001480
479 Ga0501033_0001506
480 Ga0501033_0019215
481 Ga0501034_0006298
482 Ga0501034_0021032
483 Ga0501034_0047346
484 Ga0501034_0052087
485 Ga0501036_0006440
486 Ga0501036_0048792
487 Ga0501037_0001923
488 Ga0501037_0195415
489 Ga0501038_0168464
490 Ga0501038_0357237
491 Ga0501038_0411139
492 Ga0501039_0003601
493 Ga0501039_0204232
494 Ga0501042_0044651
495 Ga0501043_0001557
496 Ga0501043_0073630
497 Ga0501046_0003702
498 Ga0501046_0351886
499 Ga0501047_0000075
500 Ga0501047_0007963
501 Ga0501047_0025302
502 Ga0501047_0040097
503 Ga0501047_0134223
504 Ga0501048_0020695
505 Ga0501068_0119238
506 Ga0501070_0003406
507 Ga0501070_0069398
508 Ga0501070_0336964
509 Ga0501074_0008427
510 Ga0501080_0225751
511 Ga0501035_0000852
512 Ga0501035_0043240
513 Ga0501035_0190096
514 Ga0501044_0016513
515 Ga0501044_0040556
516 Ga0501044_0074370
517 Ga0501044_0106560
518 nmdc:mga06z11_16529_c1
519 nmdc:mga04h51_2797_c1
520 Ga0495655_0098515
521 Ga0500583_0112505
522 Ga0500640_004395
523 Ga0500624_002335
524 Ga0466962_0002713
525 2862292029
526 2547406175
527 2585305683
528 2585312615
529 2644262799
530 2784589100
531 2785342748
532 2786671133
533 2808842568
534 2808921074
535 2809232702
536 2812357547
537 2812480057
538 2852637379
539 2862286161
540 2862389712
541 2862516402
542 2862578754
543 2867432668
544 2873155250
545 2912724031
546 2912731498
547 2919475524
548 2946068328
549 2947228579
550 2954006944
551 2954385685
552 2954677465
553 2954686689
554 2954696335
555 2954715701
556 2954725638
557 2954736174
558 2954744577
559 2954755021
560 2954763560
561 3006398093
562 3006488550
563 3006499482
564 8008578405
565 8023625204
566 8056837963

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00588

SpoU_methylase

SpoU rRNA Methylase family

148

280

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5co4-assembly1.cif.gz_A structural insights into the 2-oh methylation of c/u34 on trna 0.8791 110 248
7e3s-assembly1.cif.gz_B crystal structure of trml from shewanella oneidensis 0.8519 111 248
4kdz-assembly1.cif.gz_A crystal structure of trna/rrna methyltransferase yibk from escherichia coli (target nysgrc-012599) 0.8498 112 248
1gz0-assembly4.cif.gz_E 23s ribosomal rna g2251 2'o-methyltransferase rlmb 0.842 94 248
7e3t-assembly1.cif.gz_A-2 crystal structure of trml from mycoplasma capricolum 0.8348 111 248
ID Description Score Start End Superfamily
af_A0A0R0FE30_2_163_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8946 178 249 3.40.1280.10
af_Q9VW14_228_404_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8895 110 247 3.40.1280.10
2i6dA02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8858 109 245 3.40.1280.10
af_Q9XWY8_120_294_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8857 111 248 3.40.1280.10
5co4A00 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8791 110 248 3.40.1280.10
ID Description Score Start End GO Terms
AF-A0A399GV14-F1-model_v4 23S rRNA (Adenosine(1067)-2'-O)-methyltransferase (EC 2.1.1.230) 0.9855 7 250 GO:0003723
GO:0030743
AF-A0A0F5W5Q8-F1-model_v4 rRNA methyltransferase 0.984 5 250 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A0F5W5Q8-F1-model_v4 rRNA methyltransferase 0.9801 5 250 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A5J6HIP0-F1-model_v4 RNA methyltransferase 0.9769 1 247 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A7K3DDM7-F1-model_v4 rRNA methyltransferase 0.9711 7 254 GO:0003723
GO:0005737
GO:0006396
GO:0008173
GO:0032259

Map