F385742

General Info

Members Datasets Scaffolds Average Seq Length
283 199 252 766

Family's Representative Sequence

Representative Sequence 3300044658|Ga0466972_0000274|Ga0466972_0000274_2524_4857
Length 772
Sequence MQFASHSGEPEHGQASPTISAALIDSLFEAPRPLLAGLVFVSIGAVLTAVKTAAPLIWACVGFLALAGILRAIDLQLYQNRKTSLTAEEAARWQKRYQAGAMLQAAAIGTWCSTTLLASDDAVAHMIALSVTTGIAAGGAGRAYGRQWIFQLQVSLVFVPIVIALALRGTPFYVSAAFLFSLMGISANLHRIFMRALVAREREAALAGQFDTALNNMPHGLCMFRVDGELAVMNHRFGDMMNLPDDLVRSGASASRIIAACVEAGSISAESGNLILRGIRELQIKEIVTTDPDAARGRTLSWAIQPMMDGGAVVLLEDITERTNAEARISHLARYDELTALPNRVSFHDEIERLLANAHHAERLSALLFVDLDQFKQVNDTLGHPCGDQLLCAVANRLREMLRPEDFVARFGGDEFVVFQQNITSPEDSASLARRIVERLSERYRIDNHLVEIGASVGIALTSPDGSIGADTLLKNADMALYRAKADGRGTFCFFRDEMAATVEARRILELDLRKALANEEFELFYQPLVNLKSGKITTCEALLRWNHPVRGTVSPVDIIPVAEDMGLIVDLGRWILRRACMECMKWPEGVSVAVNFSPQQFHQRDVLSEIRYALEVSGLPAHRLEIEITESSLLRNTQLTHDILSQLHALGVRISLDDFGTGYSSLSYLHNFPMQKVKIDRSFLEGIDSDRPLTLLRGVARLSADLGMKVVVEGIETSEQLELISADGTVTEGQGYLFSRPVPAVRLRQLLNASHGRHMREDQLVGSCSFA

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
3 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
4 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
5 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
6 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
7 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
8 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
9 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
10 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
11 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
12 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
13 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
14 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
15 2904699407
16 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
17 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
18 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
19 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
20 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
21 2922425934
22 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
23 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
24 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
25 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
26 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
27 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
28 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
29 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
30 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
31 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
32 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
33 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
34 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
35 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
40 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
41 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
52 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
98 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
99 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
100 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
101 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
102 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
103 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
104 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
105 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
106 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
107 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
108 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
109 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
117 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
118 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
119 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
120 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
121 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
124 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
125 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
126 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
129 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
145 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
146 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
164 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
165 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
166 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
167 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
175 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
176 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
179 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
180 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
181 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
182 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
183 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
186 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
187 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
188 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
189 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
190 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
191 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
194 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
195 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
196 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
197 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
198 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
199 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.68
Metatranscriptomes 0
Isolates 10.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.89
Nodule 8.13
Rhizoplane 9.19
Rhizosphere 60.78
Stem 0
Stem Tuber 0
Unclassified 12.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10007093 3300001979 Bacteria 4587
2 JGI25153J46596_10002652 3300003215 Bacteria 10226
3 Ga0070683_100024418 3300005329 Bacteria 5414
4 Ga0070683_100043494 3300005329 Bacteria 4139
5 Ga0070680_100006843 3300005336 Bacteria 8690
6 Ga0070709_10001487 3300005434 Bacteria 12659
7 Ga0070709_10005197 3300005434 Bacteria 7039
8 Ga0070709_10016670 3300005434 Bacteria 4200
9 Ga0070714_100008988 3300005435 Bacteria 7823
10 Ga0070713_100007532 3300005436 Bacteria 7649
11 Ga0070710_10001558 3300005437 Bacteria 10845
12 Ga0070710_10006056 3300005437 Bacteria 5782
13 Ga0070711_100003888 3300005439 Bacteria 8772
14 Ga0070711_100039905 3300005439 Bacteria 3163
15 Ga0070663_100034756 3300005455 Bacteria 3492
16 Ga0070681_10033857 3300005458 Bacteria 5129
17 Ga0070681_10072894 3300005458 Bacteria 3396
18 Ga0070707_100045951 3300005468 Bacteria 4179
19 Ga0070679_100046448 3300005530 Bacteria 4328
20 Ga0070684_100001913 3300005535 Bacteria 15266
21 Ga0070684_100073120 3300005535 Bacteria 3020
22 Ga0068853_100003590 3300005539 Bacteria 11880
23 Ga0068853_100032829 3300005539 Bacteria 4400
24 Ga0068853_100046919 3300005539 Bacteria 3706
25 Ga0070693_100013877 3300005547 Bacteria 4114
26 Ga0070665_100013002 3300005548 Bacteria 8383
27 Ga0068855_100063160 3300005563 Bacteria 4322
28 Ga0068855_100092771 3300005563 Bacteria 3482
29 Ga0068854_100004261 3300005578 Bacteria 9011
30 Ga0068856_100002036 3300005614 Bacteria 20996
31 Ga0068851_10004640 3300005834 Bacteria 6203
32 Ga0068851_10006976 3300005834 Bacteria 5180
33 Ga0068860_100000543 3300005843 Bacteria 45937
34 Ga0081455_10005036 3300005937 Bacteria 14601
35 Ga0081455_10006141 3300005937 Bacteria 12978
36 Ga0081540_1003764 3300005983 Bacteria 11882
37 Ga0081540_1005865 3300005983 Bacteria 9086
38 Ga0081540_1006857 3300005983 Bacteria 8222
39 Ga0081540_1009326 3300005983 Bacteria 6768
40 Ga0081540_1015784 3300005983 Bacteria 4764
41 Ga0081539_10006073 3300005985 Bacteria 11812
42 Ga0081539_10018848 3300005985 Bacteria 4757
43 Ga0075365_10011031 3300006038 Bacteria 5295
44 Ga0075365_10049342 3300006038 Bacteria 2773
45 Ga0075363_100020833 3300006048 Bacteria 3293
46 Ga0070712_100008298 3300006175 Bacteria 6527
47 Ga0075366_10013173 3300006195 Bacteria 4702
48 Ga0075436_100051661 3300006914 Bacteria 2836
49 Ga0075435_100051983 3300007076 Bacteria 3302
50 Ga0105240_10004881 3300009093 Bacteria 20178
51 Ga0105240_10022030 3300009093 Bacteria 8460
52 Ga0105241_10001011 3300009174 Bacteria 21377
53 Ga0105237_10045497 3300009545 Bacteria 4416
54 Ga0105237_10046799 3300009545 Bacteria 4350
55 Ga0105238_10001367 3300009551 Bacteria 24466
56 Ga0105238_10001743 3300009551 Bacteria 21842
57 Ga0105238_10004073 3300009551 Bacteria 14490
58 Ga0105239_10014303 3300010375 Bacteria 8805
59 Ga0105239_10113491 3300010375 Bacteria 3005
60 Ga0157373_10023948 3300013100 Bacteria 4425
61 Ga0157371_10041227 3300013102 Bacteria 3295
62 Ga0163162_10064838 3300013306 Bacteria 3699
63 Ga0157372_10033664 3300013307 Bacteria 5631
64 Ga0157375_10044068 3300013308 Bacteria 4331
65 Ga0213876_10001491 3300021384 Bacteria 14550
66 Ga0213876_10013467 3300021384 Bacteria 4342
67 Ga0209148_1000235 3300025254 Bacteria 90398
68 Ga0209233_1000694 3300025261 Bacteria 15931
69 Ga0209455_1005264 3300025272 Bacteria 4037
70 Ga0209758_1016019 3300025297 Bacteria 3833
71 Ga0207656_10002853 3300025321 Bacteria 5883
72 Ga0207699_10001381 3300025906 Bacteria 11546
73 Ga0207699_10023460 3300025906 Bacteria 3358
74 Ga0207707_10000386 3300025912 Bacteria 46013
75 Ga0207707_10001016 3300025912 Bacteria 26912
76 Ga0207707_10039598 3300025912 Bacteria 4119
77 Ga0207707_10047779 3300025912 Bacteria 3727
78 Ga0207695_10001480 3300025913 Bacteria 39293
79 Ga0207671_10016121 3300025914 Bacteria 5822
80 Ga0207671_10039237 3300025914 Bacteria 3507
81 Ga0207693_10042267 3300025915 Bacteria 3588
82 Ga0207663_10005551 3300025916 Bacteria 6367
83 Ga0207657_10005387 3300025919 Bacteria 13382
84 Ga0207646_10061814 3300025922 Bacteria 3343
85 Ga0207694_10000136 3300025924 Bacteria 74908
86 Ga0207694_10063309 3300025924 Bacteria 2881
87 Ga0207664_10008822 3300025929 Bacteria 7052
88 Ga0207664_10016587 3300025929 Bacteria 5378
89 Ga0207711_10022786 3300025941 Bacteria 5240
90 Ga0207661_10000421 3300025944 Bacteria 27342
91 Ga0207661_10000801 3300025944 Bacteria 20521
92 Ga0207661_10054803 3300025944 Bacteria 3195
93 Ga0207667_10011614 3300025949 Bacteria 10225
94 Ga0207667_10049022 3300025949 Bacteria 4463
95 Ga0207640_10022162 3300025981 Bacteria 3797
96 Ga0207702_10000006 3300026078 Bacteria 346370
97 Ga0207641_10051409 3300026088 Bacteria 3490
98 Ga0207674_10011177 3300026116 Bacteria 10096
99 Ga0207674_10046764 3300026116 Bacteria 4441
100 Ga0207675_100053066 3300026118 Bacteria 3783
101 Ga0207698_10007647 3300026142 Bacteria 6776
102 Ga0207698_10028775 3300026142 Bacteria 3967
103 Ga0268266_10001136 3300028379 Bacteria 33101
104 Ga0268266_10013950 3300028379 Bacteria 6918
105 Ga0268266_10017440 3300028379 Bacteria 6123
106 Ga0268264_10000185 3300028381 Bacteria 131374
107 Ga0307517_10000098 3300028786 Bacteria 126044
108 Ga0307515_10016400 3300028794 Bacteria 13559
109 Ga0265338_10011039 3300028800 Bacteria 10483
110 Ga0265324_10005301 3300029957 Bacteria 5595
111 Ga0307511_10033050 3300030521 Bacteria 4578
112 Ga0307509_10028700 3300031507 Bacteria 6183
113 Ga0307508_10000012 3300031616 Bacteria 243167
114 Ga0307507_10014035 3300033179 Bacteria 9619
115 Ga0307510_10023654 3300033180 Bacteria 7118
116 Ga0315911_1000022 3300033442 Bacteria 118114
117 Ga0373926_0009183 3300035083 Bacteria 3300
118 Ga0373934_0002725 3300035086 Bacteria 6483
119 Ga0373936_0010484 3300035113 Bacteria 3497
120 Ga0373945_0016475 3300035116 Bacteria 2493
121 Ga0373954_0007786 3300035118 Bacteria 4690
122 Ga0373943_0013605 3300035170 Bacteria 3677
123 Ga0373931_0000654 3300035691 Bacteria 14304
124 Ga0373935_0006965 3300035692 Bacteria 6749
125 Ga0373927_0001673 3300035695 Bacteria 16572
126 Ga0373927_0021714 3300035695 Bacteria 4207
127 Ga0373933_0000026 3300035724 Bacteria 90309
128 Ga0373947_0007461 3300035725 Bacteria 6329
129 Ga0373947_0047650 3300035725 Bacteria 2569
130 Ga0395898_0020632 3300037466 Bacteria 6693
131 Ga0395901_0062875 3300038443 Bacteria 3863
132 Ga0395901_0091360 3300038443 Bacteria 3187
133 Ga0436365_0921625 3300039437 Bacteria 24575
134 Ga0436363_0719838 3300039450 Bacteria 3396
135 Ga0436362_1177934 3300039453 Bacteria 3374
136 Ga0466972_0000274 3300044658 Bacteria 32491
137 Ga0495603_0040657 3300046455 Bacteria 2782
138 Ga0495629_0048286 3300046459 Bacteria 2984
139 Ga0495639_0012974 3300046475 Bacteria 3596
140 Ga0495664_0004921 3300046477 Bacteria 7309
141 Ga0495664_0006987 3300046477 Bacteria 6254
142 Ga0495618_0022597 3300046514 Bacteria 3885
143 Ga0495630_0053189 3300046517 Bacteria 3031
144 Ga0495648_0028931 3300046524 Bacteria 3683
145 Ga0495640_0037515 3300046533 Bacteria 3418
146 Ga0495621_0009416 3300046539 Bacteria 2964
147 Ga0495645_0006760 3300046543 Bacteria 7972
148 Ga0495622_0013181 3300046557 Bacteria 3837
149 Ga0495600_0005583 3300046809 Bacteria 7596
150 Ga0495581_0015531 3300047315 Bacteria 4420
151 Ga0495680_0004903 3300047322 Bacteria 12674
152 Ga0495686_0042551 3300047472 Bacteria 2887
153 Ga0496101_0001656 3300048904 Bacteria 13367
154 Ga0496102_0010759 3300048905 Bacteria 7880
155 Ga0496103_0016825 3300048906 Bacteria 4367
156 Ga0496104_0004595 3300048907 Bacteria 12035
157 Ga0496106_0002121 3300048909 Bacteria 14838
158 Ga0496106_0007433 3300048909 Bacteria 8096
159 Ga0496107_0004259 3300048910 Bacteria 9676
160 Ga0496107_0005918 3300048910 Bacteria 8380
161 Ga0496108_0000681 3300048911 Bacteria 26279
162 Ga0496108_0041009 3300048911 Bacteria 3862
163 Ga0496108_0074774 3300048911 Bacteria 2861
164 Ga0496109_0000450 3300048912 Bacteria 35265
165 Ga0496109_0011243 3300048912 Bacteria 7687
166 Ga0496109_0068712 3300048912 Bacteria 3247
167 Ga0496110_0010269 3300048913 Bacteria 7609
168 Ga0496110_0020972 3300048913 Bacteria 5521
169 Ga0496110_0058851 3300048913 Bacteria 3385
170 Ga0496111_0012551 3300048914 Bacteria 5741
171 Ga0496111_0013638 3300048914 Bacteria 5536
172 Ga0496112_0000040 3300048915 Bacteria 89057
173 Ga0496112_0002949 3300048915 Bacteria 13878
174 Ga0496112_0006333 3300048915 Bacteria 10393
175 Ga0496112_0020266 3300048915 Bacteria 6299
176 Ga0496112_0061271 3300048915 Bacteria 3709
177 Ga0496112_0062695 3300048915 Bacteria 3667
178 Ga0496118_0002570 3300048921 Bacteria 24239
179 Ga0496118_0014251 3300048921 Bacteria 7455
180 Ga0496121_0000265 3300048924 Bacteria 109251
181 Ga0496121_0001125 3300048924 Bacteria 47001
182 Ga0496121_0016292 3300048924 Bacteria 7687
183 Ga0496121_0033170 3300048924 Bacteria 4678
184 Ga0496121_0059373 3300048924 Bacteria 3154
185 Ga0496121_0102666 3300048924 Bacteria 2202
186 Ga0496124_0022017 3300048927 Bacteria 5857
187 Ga0496124_0057301 3300048927 Bacteria 3284
188 Ga0496126_0005480 3300048929 Bacteria 14467
189 Ga0496126_0027538 3300048929 Bacteria 5427
190 Ga0496126_0054185 3300048929 Bacteria 3634
191 Ga0496126_0062663 3300048929 Bacteria 3336
192 Ga0496126_0067746 3300048929 Bacteria 3189
193 Ga0501031_0005620 3300049568 Bacteria 8169
194 Ga0501032_0001270 3300049569 Bacteria 20219
195 Ga0501032_0004513 3300049569 Bacteria 10476
196 Ga0501033_0000175 3300049570 Bacteria 60845
197 Ga0501033_0015137 3300049570 Bacteria 5852
198 Ga0501034_0000202 3300049571 Bacteria 112985
199 Ga0501036_0000042 3300049572 Bacteria 79876
200 Ga0501036_0022055 3300049572 Bacteria 5355
201 Ga0501037_0000100 3300049573 Bacteria 81013
202 Ga0501038_0000157 3300049574 Bacteria 58169
203 Ga0501038_0002402 3300049574 Bacteria 17455
204 Ga0501039_0000216 3300049575 Bacteria 42349
205 Ga0501042_0008128 3300049578 Bacteria 6911
206 Ga0501043_0004658 3300049579 Bacteria 11117
207 Ga0501043_0032059 3300049579 Bacteria 4130
208 Ga0501047_0000159 3300049581 Bacteria 82106
209 Ga0501047_0006707 3300049581 Bacteria 10824
210 Ga0501047_0089239 3300049581 Bacteria 2960
211 Ga0501048_0005267 3300049582 Bacteria 9849
212 Ga0501067_0002974 3300049583 Bacteria 9351
213 Ga0501068_0000168 3300049584 Bacteria 30562
214 Ga0501068_0010825 3300049584 Bacteria 5132
215 Ga0501072_0000475 3300049588 Bacteria 28798
216 Ga0501073_0000678 3300049589 Bacteria 23931
217 Ga0501073_0029036 3300049589 Bacteria 3951
218 Ga0501074_0000117 3300049590 Bacteria 40113
219 Ga0501074_0001904 3300049590 Bacteria 14331
220 Ga0501079_0009895 3300049741 Bacteria 7234
221 Ga0501080_0004449 3300049742 Bacteria 12471
222 Ga0501080_0015418 3300049742 Bacteria 7044
223 Ga0501080_0031066 3300049742 Bacteria 4977
224 Ga0501083_0001555 3300049744 Bacteria 15682
225 Ga0501035_0000172 3300049822 Bacteria 79203
226 Ga0501035_0041667 3300049822 Bacteria 4145
227 Ga0501044_0000282 3300049823 Bacteria 64640
228 Ga0501044_0127751 3300049823 Bacteria 2538
229 Ga0501045_0061656 3300049824 Bacteria 2751
230 nmdc:mga03n38_1311_c1 3300050490 Bacteria 7027
231 nmdc:mga0k408_38881_c1 3300050493 Bacteria 2732
232 nmdc:mga07m45_3363_c1 3300050496 Bacteria 7708
233 nmdc:mga08x19_43619_c1 3300050514 Bacteria 2861
234 Ga0500566_0000078 3300053094 Bacteria 47558
235 Ga0500640_000121 3300053095 Bacteria 14580
236 Ga0500641_0001219 3300053096 Bacteria 9151
237 Ga0500572_000170 3300053111 Bacteria 22863
238 Ga0500572_000843 3300053111 Bacteria 9578
239 Ga0500595_017100 3300053119 Bacteria 2686
240 Ga0500608_003737 3300053122 Bacteria 5767
241 Ga0500559_0000829 3300053136 Bacteria 20012
242 Ga0500568_0008058 3300053139 Bacteria 5114
243 Ga0500573_0019168 3300053140 Bacteria 3912
244 Ga0500603_000081 3300053150 Bacteria 22182
245 Ga0500622_0019343 3300053156 Bacteria 3617
246 Ga0500638_012118 3300053162 Bacteria 3853
247 Ga0500639_000028 3300053163 Bacteria 77951
248 Ga0500639_033480 3300053163 Bacteria 2716
249 Ga0500596_001113 3300053735 Bacteria 5405
250 Ga0501084_0002863 3300054114 Bacteria 13951
251 Ga0501082_0005465 3300060353 Bacteria 11036
252 Ga0501082_0024686 3300060353 Bacteria 5181

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006038 Ga0075365_10011031 Ga0075365_100110312 629
2 3300048915 Ga0496112_0062695 Ga0496112_0062695_15_2042 642
3 3300046455 Ga0495603_0040657 Ga0495603_0040657_23_1981 647
4 3300049589 Ga0501073_0029036 Ga0501073_0029036_1880_3910 654
5 3300046459 Ga0495629_0048286 Ga0495629_0048286_13_2043 671
6 3300048910 Ga0496107_0004259 Ga0496107_0004259_10_2034 671
7 3300035083 Ga0373926_0009183 Ga0373926_0009183_24_2075 678
8 3300039450 Ga0436363_0719838 Ga0436363_0719838_1269_3380 698
9 3300046809 Ga0495600_0005583 Ga0495600_0005583_5471_7582 698
10 3300035695 Ga0373927_0021714 Ga0373927_0021714_2048_4186 707
11 3300048924 Ga0496121_0102666 Ga0496121_0102666_43_2184 708
12 3300013102 Ga0157371_10041227 Ga0157371_100412272 718
13 3300060353 Ga0501082_0024686 Ga0501082_0024686_2918_5152 722
14 iso_pu_bacteria 2922361189 2922363434 722
15 3300053163 Ga0500639_033480 Ga0500639_033480_485_2677 725
16 3300038443 Ga0395901_0091360 Ga0395901_0091360_147_2498 728
17 3300048913 Ga0496110_0010269 Ga0496110_0010269_2544_4754 733
18 3300048914 Ga0496111_0013638 Ga0496111_0013638_3279_5489 733
19 iso_pu_bacteria 2922386360 2922389551 733
20 3300025261 Ga0209233_1000694 Ga0209233_10006949 739
21 3300048913 Ga0496110_0058851 Ga0496110_0058851_294_2621 742
22 3300049568 Ga0501031_0005620 Ga0501031_0005620_4929_7274 750
23 3300049569 Ga0501032_0001270 Ga0501032_0001270_14545_16890 750
24 3300049570 Ga0501033_0000175 Ga0501033_0000175_51450_53795 750
25 3300049571 Ga0501034_0000202 Ga0501034_0000202_95024_97369 750
26 3300049572 Ga0501036_0000042 Ga0501036_0000042_61940_64285 750
27 3300049573 Ga0501037_0000100 Ga0501037_0000100_58776_61121 750
28 3300049574 Ga0501038_0000157 Ga0501038_0000157_51435_53780 750
29 3300049575 Ga0501039_0000216 Ga0501039_0000216_9504_11849 750
30 3300049578 Ga0501042_0008128 Ga0501042_0008128_67_2412 750
31 3300049579 Ga0501043_0004658 Ga0501043_0004658_4390_6735 750
32 3300049581 Ga0501047_0000159 Ga0501047_0000159_17543_19888 750
33 3300049583 Ga0501067_0002974 Ga0501067_0002974_145_2475 750
34 3300049584 Ga0501068_0000168 Ga0501068_0000168_5922_8267 750
35 3300049588 Ga0501072_0000475 Ga0501072_0000475_10520_12865 750
36 3300049589 Ga0501073_0000678 Ga0501073_0000678_5979_8324 750
37 3300049590 Ga0501074_0000117 Ga0501074_0000117_1329_3659 750
38 3300049741 Ga0501079_0009895 Ga0501079_0009895_4249_6594 750
39 3300049742 Ga0501080_0004449 Ga0501080_0004449_6718_9063 750
40 3300049744 Ga0501083_0001555 Ga0501083_0001555_1270_3615 750
41 3300049822 Ga0501035_0000172 Ga0501035_0000172_25252_27597 750
42 3300049823 Ga0501044_0000282 Ga0501044_0000282_48147_50492 750
43 3300049824 Ga0501045_0061656 Ga0501045_0061656_336_2681 750
44 3300054114 Ga0501084_0002863 Ga0501084_0002863_4672_7017 750
45 3300060353 Ga0501082_0005465 Ga0501082_0005465_298_2643 750
46 3300049569 Ga0501032_0004513 Ga0501032_0004513_3760_6087 753
47 3300049570 Ga0501033_0015137 Ga0501033_0015137_1566_3893 753
48 3300049572 Ga0501036_0022055 Ga0501036_0022055_2292_4619 753
49 3300049581 Ga0501047_0006707 Ga0501047_0006707_2164_4491 753
50 3300049582 Ga0501048_0005267 Ga0501048_0005267_2633_4960 753
51 3300049584 Ga0501068_0010825 Ga0501068_0010825_999_3326 753
52 3300049590 Ga0501074_0001904 Ga0501074_0001904_8447_10774 753
53 3300049742 Ga0501080_0015418 Ga0501080_0015418_3746_6073 753
54 3300049822 Ga0501035_0041667 Ga0501035_0041667_487_2814 753
55 iso_pu_bacteria 2513237096 2513659118 753
56 iso_pu_bacteria 2513237137 2513859160 753
57 iso_pu_bacteria 2513237145 2513920554 753
58 iso_pu_bacteria 2517572143 2517887423 753
59 iso_pu_bacteria 2524023228 2524539235 753
60 iso_pu_bacteria 2667528175 2671120838 753
61 iso_pu_bacteria 2904699407 2904707227 753
62 iso_pu_bacteria 2906635258 2906637419 753
63 iso_pu_bacteria 2906660503 2906663648 753
64 iso_pu_bacteria 8006933436 8006935014 753
65 iso_pu_bacteria 8006973647 8006974982 753
66 3300005435 Ga0070714_100008988 Ga0070714_1000089885 755
67 3300021384 Ga0213876_10013467 Ga0213876_100134672 755
68 3300025929 Ga0207664_10008822 Ga0207664_100088224 755
69 3300035695 Ga0373927_0001673 Ga0373927_0001673_508_2838 755
70 3300009551 Ga0105238_10004073 Ga0105238_1000407310 757
71 3300010375 Ga0105239_10014303 Ga0105239_100143032 757
72 3300025924 Ga0207694_10063309 Ga0207694_100633092 757
73 3300033442 Ga0315911_1000022 Ga0315911_1000022119 757
74 3300048924 Ga0496121_0059373 Ga0496121_0059373_514_2799 757
75 3300005434 Ga0070709_10005197 Ga0070709_100051973 758
76 3300005436 Ga0070713_100007532 Ga0070713_1000075327 758
77 3300005437 Ga0070710_10001558 Ga0070710_100015584 758
78 3300025906 Ga0207699_10001381 Ga0207699_100013814 758
79 3300025915 Ga0207693_10042267 Ga0207693_100422672 758
80 3300025929 Ga0207664_10016587 Ga0207664_100165873 758
81 3300035691 Ga0373931_0000654 Ga0373931_0000654_4166_6454 758
82 3300048907 Ga0496104_0004595 Ga0496104_0004595_984_3272 758
83 3300048912 Ga0496109_0011243 Ga0496109_0011243_964_3252 758
84 3300048913 Ga0496110_0020972 Ga0496110_0020972_745_3033 758
85 3300048915 Ga0496112_0002949 Ga0496112_0002949_3740_6028 758
86 iso_pu_bacteria 2904690495 2904691716 762
87 iso_pu_bacteria 2908756301 2908763768 762
88 iso_pu_bacteria 3005506211 3005511094 763
89 3300044658 Ga0466972_0000274 Ga0466972_0000274_2524_4857 764
90 3300005530 Ga0070679_100046448 Ga0070679_1000464483 766
91 3300048924 Ga0496121_0016292 Ga0496121_0016292_171_2501 766
92 3300048929 Ga0496126_0027538 Ga0496126_0027538_206_2536 766
93 iso_pu_bacteria 2922425934 2922433127 766
94 iso_pu_bacteria 2941507105 2941507292 766
95 iso_pu_bacteria 2941515067 2941515719 766
96 iso_pu_bacteria 2941523033 2941523573 766
97 iso_pu_bacteria 8019555841 8019563643 766
98 iso_pu_bacteria 8019565922 8019573713 766
99 iso_pu_bacteria 2513237141 2513893093 767
100 iso_pu_bacteria 2721755755 2723848824 767
101 iso_pu_bacteria 2874604998 2874606046 767
102 iso_pu_bacteria 2876808645 2876817837 767
103 iso_pu_bacteria 2879110137 2879116790 767
104 iso_pu_bacteria 2889033259 2889034445 767
105 3300005937 Ga0081455_10006141 Ga0081455_100061414 769
106 3300005983 Ga0081540_1006857 Ga0081540_10068573 769
107 3300005985 Ga0081539_10006073 Ga0081539_100060736 769
108 3300025254 Ga0209148_1000235 Ga0209148_100023586 769
109 3300048909 Ga0496106_0007433 Ga0496106_0007433_4521_6839 769
110 3300048911 Ga0496108_0000681 Ga0496108_0000681_12855_15173 769
111 3300048912 Ga0496109_0000450 Ga0496109_0000450_21800_24118 769
112 3300048915 Ga0496112_0006333 Ga0496112_0006333_7803_10121 769
113 3300048915 Ga0496112_0000040 Ga0496112_0000040_73215_75539 770
114 3300049574 Ga0501038_0002402 Ga0501038_0002402_3735_6062 770
115 3300049579 Ga0501043_0032059 Ga0501043_0032059_892_3219 770
116 3300049581 Ga0501047_0089239 Ga0501047_0089239_48_2375 770
117 3300049823 Ga0501044_0127751 Ga0501044_0127751_166_2493 770
118 3300053111 Ga0500572_000843 Ga0500572_000843_5304_7634 770
119 3300053136 Ga0500559_0000829 Ga0500559_0000829_11295_13625 770
120 3300053735 Ga0500596_001113 Ga0500596_001113_3038_5368 770
121 iso_pu_bacteria 8056681323 8056681743 770
122 3300003215 JGI25153J46596_10002652 JGI25153J46596_100026527 771
123 3300005329 Ga0070683_100024418 Ga0070683_1000244183 771
124 3300005329 Ga0070683_100043494 Ga0070683_1000434943 771
125 3300005336 Ga0070680_100006843 Ga0070680_1000068438 771
126 3300005434 Ga0070709_10001487 Ga0070709_100014875 771
127 3300005434 Ga0070709_10016670 Ga0070709_100166703 771
128 3300005437 Ga0070710_10006056 Ga0070710_100060562 771
129 3300005439 Ga0070711_100003888 Ga0070711_1000038882 771
130 3300005439 Ga0070711_100039905 Ga0070711_1000399052 771
131 3300005455 Ga0070663_100034756 Ga0070663_1000347562 771
132 3300005458 Ga0070681_10033857 Ga0070681_100338572 771
133 3300005458 Ga0070681_10072894 Ga0070681_100728942 771
134 3300005468 Ga0070707_100045951 Ga0070707_1000459513 771
135 3300005535 Ga0070684_100001913 Ga0070684_10000191312 771
136 3300005535 Ga0070684_100073120 Ga0070684_1000731201 771
137 3300005539 Ga0068853_100003590 Ga0068853_1000035904 771
138 3300005539 Ga0068853_100046919 Ga0068853_1000469192 771
139 3300005547 Ga0070693_100013877 Ga0070693_1000138771 771
140 3300005548 Ga0070665_100013002 Ga0070665_1000130026 771
141 3300005563 Ga0068855_100063160 Ga0068855_1000631602 771
142 3300005834 Ga0068851_10004640 Ga0068851_100046405 771
143 3300005843 Ga0068860_100000543 Ga0068860_10000054343 771
144 3300005937 Ga0081455_10005036 Ga0081455_100050363 771
145 3300005983 Ga0081540_1003764 Ga0081540_10037644 771
146 3300005983 Ga0081540_1005865 Ga0081540_10058655 771
147 3300005983 Ga0081540_1009326 Ga0081540_10093262 771
148 3300005983 Ga0081540_1015784 Ga0081540_10157844 771
149 3300005985 Ga0081539_10018848 Ga0081539_100188482 771
150 3300006038 Ga0075365_10049342 Ga0075365_100493421 771
151 3300006048 Ga0075363_100020833 Ga0075363_1000208332 771
152 3300006175 Ga0070712_100008298 Ga0070712_1000082985 771
153 3300006195 Ga0075366_10013173 Ga0075366_100131732 771
154 3300006914 Ga0075436_100051661 Ga0075436_1000516611 771
155 3300007076 Ga0075435_100051983 Ga0075435_1000519831 771
156 3300009093 Ga0105240_10022030 Ga0105240_100220306 771
157 3300009545 Ga0105237_10045497 Ga0105237_100454972 771
158 3300009545 Ga0105237_10046799 Ga0105237_100467991 771
159 3300009551 Ga0105238_10001743 Ga0105238_1000174312 771
160 3300010375 Ga0105239_10113491 Ga0105239_101134912 771
161 3300013100 Ga0157373_10023948 Ga0157373_100239482 771
162 3300013306 Ga0163162_10064838 Ga0163162_100648383 771
163 3300013307 Ga0157372_10033664 Ga0157372_100336643 771
164 3300013308 Ga0157375_10044068 Ga0157375_100440683 771
165 3300021384 Ga0213876_10001491 Ga0213876_100014913 771
166 3300025272 Ga0209455_1005264 Ga0209455_10052642 771
167 3300025297 Ga0209758_1016019 Ga0209758_10160192 771
168 3300025906 Ga0207699_10023460 Ga0207699_100234602 771
169 3300025912 Ga0207707_10000386 Ga0207707_100003863 771
170 3300025912 Ga0207707_10001016 Ga0207707_1000101626 771
171 3300025912 Ga0207707_10039598 Ga0207707_100395982 771
172 3300025912 Ga0207707_10047779 Ga0207707_100477791 771
173 3300025914 Ga0207671_10016121 Ga0207671_100161212 771
174 3300025914 Ga0207671_10039237 Ga0207671_100392372 771
175 3300025916 Ga0207663_10005551 Ga0207663_100055512 771
176 3300025919 Ga0207657_10005387 Ga0207657_1000538714 771
177 3300025922 Ga0207646_10061814 Ga0207646_100618142 771
178 3300025941 Ga0207711_10022786 Ga0207711_100227864 771
179 3300025944 Ga0207661_10000421 Ga0207661_1000042120 771
180 3300025944 Ga0207661_10000801 Ga0207661_100008015 771
181 3300025944 Ga0207661_10054803 Ga0207661_100548032 771
182 3300025949 Ga0207667_10011614 Ga0207667_100116142 771
183 3300026088 Ga0207641_10051409 Ga0207641_100514092 771
184 3300026116 Ga0207674_10046764 Ga0207674_100467642 771
185 3300026118 Ga0207675_100053066 Ga0207675_1000530664 771
186 3300026142 Ga0207698_10007647 Ga0207698_100076472 771
187 3300028379 Ga0268266_10001136 Ga0268266_1000113635 771
188 3300028379 Ga0268266_10013950 Ga0268266_100139505 771
189 3300028379 Ga0268266_10017440 Ga0268266_100174404 771
190 3300028381 Ga0268264_10000185 Ga0268264_10000185106 771
191 3300028786 Ga0307517_10000098 Ga0307517_1000009897 771
192 3300028794 Ga0307515_10016400 Ga0307515_1001640011 771
193 3300030521 Ga0307511_10033050 Ga0307511_100330502 771
194 3300031507 Ga0307509_10028700 Ga0307509_100287002 771
195 3300031616 Ga0307508_10000012 Ga0307508_10000012223 771
196 3300033179 Ga0307507_10014035 Ga0307507_100140357 771
197 3300033180 Ga0307510_10023654 Ga0307510_100236543 771
198 3300035086 Ga0373934_0002725 Ga0373934_0002725_542_2872 771
199 3300035113 Ga0373936_0010484 Ga0373936_0010484_267_2600 771
200 3300035116 Ga0373945_0016475 Ga0373945_0016475_33_2363 771
201 3300035118 Ga0373954_0007786 Ga0373954_0007786_2161_4491 771
202 3300035170 Ga0373943_0013605 Ga0373943_0013605_948_3278 771
203 3300035692 Ga0373935_0006965 Ga0373935_0006965_3166_5496 771
204 3300035724 Ga0373933_0000026 Ga0373933_0000026_76037_78367 771
205 3300035725 Ga0373947_0007461 Ga0373947_0007461_3020_5350 771
206 3300035725 Ga0373947_0047650 Ga0373947_0047650_46_2376 771
207 3300037466 Ga0395898_0020632 Ga0395898_0020632_2484_4814 771
208 3300038443 Ga0395901_0062875 Ga0395901_0062875_1328_3658 771
209 3300039437 Ga0436365_0921625 Ga0436365_0921625_13692_16022 771
210 3300039453 Ga0436362_1177934 Ga0436362_1177934_302_2632 771
211 3300046475 Ga0495639_0012974 Ga0495639_0012974_951_3281 771
212 3300046477 Ga0495664_0004921 Ga0495664_0004921_1427_3757 771
213 3300046477 Ga0495664_0006987 Ga0495664_0006987_681_3011 771
214 3300046514 Ga0495618_0022597 Ga0495618_0022597_664_2994 771
215 3300046517 Ga0495630_0053189 Ga0495630_0053189_66_2396 771
216 3300046524 Ga0495648_0028931 Ga0495648_0028931_177_2525 771
217 3300046533 Ga0495640_0037515 Ga0495640_0037515_853_3183 771
218 3300046539 Ga0495621_0009416 Ga0495621_0009416_228_2558 771
219 3300046543 Ga0495645_0006760 Ga0495645_0006760_629_2959 771
220 3300046557 Ga0495622_0013181 Ga0495622_0013181_893_3223 771
221 3300047315 Ga0495581_0015531 Ga0495581_0015531_1523_3853 771
222 3300047322 Ga0495680_0004903 Ga0495680_0004903_5221_7551 771
223 3300047472 Ga0495686_0042551 Ga0495686_0042551_486_2816 771
224 3300048904 Ga0496101_0001656 Ga0496101_0001656_2894_5221 771
225 3300048905 Ga0496102_0010759 Ga0496102_0010759_1848_4175 771
226 3300048906 Ga0496103_0016825 Ga0496103_0016825_247_2574 771
227 3300048909 Ga0496106_0002121 Ga0496106_0002121_2198_4528 771
228 3300048910 Ga0496107_0005918 Ga0496107_0005918_5665_7992 771
229 3300048911 Ga0496108_0041009 Ga0496108_0041009_1092_3422 771
230 3300048911 Ga0496108_0074774 Ga0496108_0074774_126_2456 771
231 3300048912 Ga0496109_0068712 Ga0496109_0068712_772_3102 771
232 3300048914 Ga0496111_0012551 Ga0496111_0012551_1209_3536 771
233 3300048915 Ga0496112_0020266 Ga0496112_0020266_433_2763 771
234 3300048915 Ga0496112_0061271 Ga0496112_0061271_482_2815 771
235 3300048921 Ga0496118_0002570 Ga0496118_0002570_15900_18230 771
236 3300048921 Ga0496118_0014251 Ga0496118_0014251_455_2791 771
237 3300048924 Ga0496121_0000265 Ga0496121_0000265_59847_62177 771
238 3300048924 Ga0496121_0001125 Ga0496121_0001125_31776_34106 771
239 3300048924 Ga0496121_0033170 Ga0496121_0033170_573_2906 771
240 3300048927 Ga0496124_0022017 Ga0496124_0022017_207_2537 771
241 3300048927 Ga0496124_0057301 Ga0496124_0057301_765_3110 771
242 3300048929 Ga0496126_0005480 Ga0496126_0005480_2511_4838 771
243 3300048929 Ga0496126_0054185 Ga0496126_0054185_23_2353 771
244 3300048929 Ga0496126_0062663 Ga0496126_0062663_548_2878 771
245 3300048929 Ga0496126_0067746 Ga0496126_0067746_781_3111 771
246 3300049742 Ga0501080_0031066 Ga0501080_0031066_1227_3560 771
247 3300050490 nmdc:mga03n38_1311_c1 nmdc:mga03n38_1311_c1_4589_6919 771
248 3300050493 nmdc:mga0k408_38881_c1 nmdc:mga0k408_38881_c1_351_2681 771
249 3300050496 nmdc:mga07m45_3363_c1 nmdc:mga07m45_3363_c1_2517_4847 771
250 3300050514 nmdc:mga08x19_43619_c1 nmdc:mga08x19_43619_c1_468_2798 771
251 3300053094 Ga0500566_0000078 Ga0500566_0000078_24808_27138 771
252 3300053095 Ga0500640_000121 Ga0500640_000121_2398_4728 771
253 3300053096 Ga0500641_0001219 Ga0500641_0001219_2735_5065 771
254 3300053111 Ga0500572_000170 Ga0500572_000170_15141_17471 771
255 3300053119 Ga0500595_017100 Ga0500595_017100_65_2395 771
256 3300053122 Ga0500608_003737 Ga0500608_003737_515_2845 771
257 3300053139 Ga0500568_0008058 Ga0500568_0008058_1961_4291 771
258 3300053140 Ga0500573_0019168 Ga0500573_0019168_747_3077 771
259 3300053150 Ga0500603_000081 Ga0500603_000081_15141_17471 771
260 3300053156 Ga0500622_0019343 Ga0500622_0019343_555_2885 771
261 3300053162 Ga0500638_012118 Ga0500638_012118_249_2579 771
262 3300053163 Ga0500639_000028 Ga0500639_000028_74848_77178 771
263 iso_pu_bacteria 2508501128 2509147828 771
264 iso_pu_bacteria 8056689827 8056696093 771
265 3300001979 JGI24740J21852_10007093 JGI24740J21852_100070933 772
266 3300005539 Ga0068853_100032829 Ga0068853_1000328292 772
267 3300005563 Ga0068855_100092771 Ga0068855_1000927711 772
268 3300005578 Ga0068854_100004261 Ga0068854_1000042618 772
269 3300005614 Ga0068856_100002036 Ga0068856_10000203624 772
270 3300005834 Ga0068851_10006976 Ga0068851_100069762 772
271 3300009093 Ga0105240_10004881 Ga0105240_100048815 772
272 3300009174 Ga0105241_10001011 Ga0105241_1000101115 772
273 3300009551 Ga0105238_10001367 Ga0105238_1000136728 772
274 3300025321 Ga0207656_10002853 Ga0207656_100028533 772
275 3300025913 Ga0207695_10001480 Ga0207695_1000148022 772
276 3300025924 Ga0207694_10000136 Ga0207694_1000013671 772
277 3300025949 Ga0207667_10049022 Ga0207667_100490222 772
278 3300025981 Ga0207640_10022162 Ga0207640_100221622 772
279 3300026078 Ga0207702_10000006 Ga0207702_10000006161 772
280 3300026116 Ga0207674_10011177 Ga0207674_100111775 772
281 3300026142 Ga0207698_10028775 Ga0207698_100287752 772
282 3300028800 Ga0265338_10011039 Ga0265338_100110394 772
283 3300029957 Ga0265324_10005301 Ga0265324_100053014 772

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00990

GGDEF

Diguanylate cyclase, GGDEF domain

333

491

0.98

PF00563

EAL

EAL domain

510

742

0.97

PF12860

PAS_7

PAS fold

214

327

0.96

Feature Viewer

pLDDT pTM Quality
80.55 0.42 Low
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Predicted Structure (AlphaFold2)

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