F385703

General Info

Members Datasets Scaffolds Average Seq Length
283 211 261 498

Family's Representative Sequence

Representative Sequence 3300036712|Ga0316584_0003972|Ga0316584_0003972_1966_3795
Length 609
Sequence VTCGSSISLEAGPDSVGHAPDGIGAQVRGQADALIKRHRPATIGYLIEALAPTPCDAPSPSLELLLTEHLPPSGKVSQTGMAAAAQSRCKQPGDQVPIRFPRQSSRVPMSKRVLIVDDDPAQRRILEEVIKRLGYQTRTAASGDKALDILLGPDAGTISLVLLDLVMPGTGGLEVLARLNSKPGIPPVIVETANGSIDAAINAMRAGAVDFVVKPASPERLECSIKNALRIEQLSGEITRMKKKAEGLLTFDDLIISTEPMGRVVSLGKRAAQSNIPVLIEGESGVGKELIARAIQGESERAGGPFVTVNCGAIPENLIESTLFGHEKGSFTGAHEKRIGKFQEADGGTLFLDEVGELPLDAQVKLLRALQEGEIDPVGGKRPIKVNFRLISATNRDMIQLVKDGKFREDLYYRLNVFPVWVPPLKDRLEDVPQLAMHFLSRFAAEEGKRVSSISDEAMVLLTRYAWPGNVRQLENAMFRAVVLADGSELGVSEFPQIAAHVTGYDTVVPDAPAPKPRGAFEGPALLGAENFVPRTIEVREGKGAGSIGIPAVSETGDIRPLDQIEADMIRLALGRYRGHMTEVARRLGIGRSTLYRKMQEYGLESRMG

Samples

Sample ID Description Type Environment
1 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
2 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
3 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
4 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
5 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
6 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
7 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
8 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
9 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
10 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
11 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
12 2902330777 Methylobacterium sp. 2A Isolate Unclassified
13 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
14 2909042592 Labrys sp. LIt4 Isolate Nodule
15 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
16 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
17 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
18 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
19 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
20 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
31 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
35 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
42 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
52 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
53 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
54 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
57 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
62 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
63 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
64 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
65 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
66 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
110 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
111 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
112 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
113 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
114 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
115 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
116 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
117 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
118 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
119 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
120 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
125 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
126 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
127 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
128 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
129 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
130 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
131 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
132 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
133 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
134 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
135 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
136 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
137 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
138 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
139 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
142 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
143 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
144 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
145 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
146 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
162 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
163 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
174 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
175 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
176 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
177 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
178 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
179 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
180 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
181 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
182 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
183 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
186 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
187 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
188 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
189 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
190 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
191 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
192 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
193 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
194 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
195 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
196 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
197 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
198 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
199 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
200 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
201 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
202 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
203 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
204 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
205 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
206 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
207 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
208 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
209 641522639 Methylobacterium sp. 4-46 Isolate Nodule
210 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
211 8002060224 Methylocystis sp. Sn-Cys Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.87
Metatranscriptomes 0.35
Isolates 7.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.19
Nodule 1.41
Rhizoplane 5.3
Rhizosphere 77.03
Stem 0
Stem Tuber 0
Unclassified 7.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1167918 3300003578 Bacteria 1850
2 Ga0055531_10005523 3300003794 Bacteria 7383
3 Ga0070682_100024225 3300005337 Bacteria 3610
4 Ga0070689_100003088 3300005340 Bacteria 10982
5 Ga0070691_10033443 3300005341 Bacteria 2419
6 Ga0070661_100003574 3300005344 Bacteria 10700
7 Ga0070669_100010386 3300005353 Bacteria 6611
8 Ga0070675_100034402 3300005354 Bacteria 4112
9 Ga0070674_100002336 3300005356 Bacteria 10469
10 Ga0070673_100033208 3300005364 Bacteria 3893
11 Ga0070714_100020056 3300005435 Bacteria 5454
12 Ga0070713_100000002 3300005436 Bacteria 245989
13 Ga0070663_100007572 3300005455 Bacteria 6621
14 Ga0070681_10007438 3300005458 Bacteria 10704
15 Ga0070681_10007760 3300005458 Bacteria 10491
16 Ga0070707_100007960 3300005468 Bacteria 9843
17 Ga0070698_100062178 3300005471 Bacteria 3767
18 Ga0070699_100104862 3300005518 Bacteria 2480
19 Ga0068853_100033467 3300005539 Bacteria 4361
20 Ga0068853_100062395 3300005539 Bacteria 3225
21 Ga0070672_100012339 3300005543 Bacteria 5995
22 Ga0070686_100095552 3300005544 Bacteria 1997
23 Ga0070695_100001088 3300005545 Bacteria 14865
24 Ga0070695_100028119 3300005545 Bacteria 3487
25 Ga0070695_100071383 3300005545 Bacteria 2274
26 Ga0070696_100009933 3300005546 Bacteria 6367
27 Ga0070693_100016025 3300005547 Bacteria 3872
28 Ga0070665_100091628 3300005548 Bacteria 3044
29 Ga0070664_100020040 3300005564 Bacteria 5506
30 Ga0070664_100112465 3300005564 Bacteria 2378
31 Ga0068857_100000722 3300005577 Bacteria 24631
32 Ga0068857_100091077 3300005577 Bacteria 2729
33 Ga0068856_100000312 3300005614 Bacteria 53339
34 Ga0068856_100001945 3300005614 Bacteria 21510
35 Ga0070702_100027639 3300005615 Bacteria 3064
36 Ga0068852_100036121 3300005616 Bacteria 4131
37 Ga0068860_100031679 3300005843 Bacteria 5083
38 Ga0068862_100017614 3300005844 Bacteria 5947
39 Ga0081455_10000042 3300005937 Bacteria 133329
40 Ga0081455_10003103 3300005937 Bacteria 19331
41 Ga0081540_1000024 3300005983 Bacteria 158868
42 Ga0081540_1044220 3300005983 Bacteria 2275
43 Ga0075363_100006153 3300006048 Bacteria 5424
44 Ga0075363_100012262 3300006048 Bacteria 4127
45 Ga0075364_10001556 3300006051 Bacteria 12543
46 Ga0075364_10002581 3300006051 Bacteria 10152
47 Ga0070712_100000045 3300006175 Bacteria 66187
48 Ga0075362_10000893 3300006177 Bacteria 9054
49 Ga0075367_10012632 3300006178 Bacteria 4513
50 Ga0075366_10003575 3300006195 Bacteria 8226
51 Ga0068871_100097090 3300006358 Bacteria 2462
52 Ga0075428_100009290 3300006844 Bacteria 10901
53 Ga0075428_100050819 3300006844 Bacteria 4546
54 Ga0075430_100065980 3300006846 Bacteria 3040
55 Ga0075431_100000519 3300006847 Bacteria 32288
56 Ga0075431_100000736 3300006847 Bacteria 28248
57 Ga0075431_100008710 3300006847 Bacteria 10165
58 Ga0075431_100027362 3300006847 Bacteria 5850
59 Ga0075433_10094524 3300006852 Bacteria 2646
60 Ga0075429_100025567 3300006880 Bacteria 5125
61 Ga0075429_100161789 3300006880 Bacteria 1960
62 Ga0075436_100000255 3300006914 Bacteria 33272
63 Ga0105240_10004492 3300009093 Bacteria 21215
64 Ga0105240_10192596 3300009093 Bacteria 2396
65 Ga0105240_10363536 3300009093 Bacteria 1638
66 Ga0105240_10366368 3300009093 Bacteria 1631
67 Ga0111539_10003352 3300009094 Bacteria 21158
68 Ga0111539_10004045 3300009094 Bacteria 19247
69 Ga0111539_10034132 3300009094 Bacteria 6172
70 Ga0111539_10091720 3300009094 Bacteria 3569
71 Ga0114129_10005469 3300009147 Bacteria 17954
72 Ga0114129_10024112 3300009147 Bacteria 8621
73 Ga0114129_10057618 3300009147 Bacteria 5436
74 Ga0114129_10308611 3300009147 Bacteria 2107
75 Ga0114129_10377709 3300009147 Bacteria 1872
76 Ga0105237_10001328 3300009545 Bacteria 32811
77 Ga0105238_10001436 3300009551 Bacteria 23918
78 Ga0105249_10140607 3300009553 Bacteria 2314
79 Ga0105239_10190033 3300010375 Bacteria 2299
80 Ga0157373_10005154 3300013100 Bacteria 9825
81 Ga0157369_10001118 3300013105 Bacteria 33541
82 Ga0157369_10016286 3300013105 Bacteria 8368
83 Ga0157372_10003118 3300013307 Bacteria 17875
84 Ga0157372_10009220 3300013307 Bacteria 10491
85 Ga0157375_10018116 3300013308 Bacteria 6380
86 Ga0157380_10140843 3300014326 Bacteria 2072
87 Ga0157379_10010346 3300014968 Bacteria 8126
88 Ga0157379_10037494 3300014968 Bacteria 4323
89 Ga0157379_10043536 3300014968 Bacteria 4008
90 Ga0209676_1000182 3300025292 Bacteria 146373
91 Ga0209050_1005142 3300025298 Bacteria 8390
92 Ga0209257_1000484 3300025304 Bacteria 72044
93 Ga0207699_10000133 3300025906 Bacteria 50958
94 Ga0207645_10012101 3300025907 Bacteria 5864
95 Ga0207645_10067450 3300025907 Bacteria 2287
96 Ga0207707_10095909 3300025912 Bacteria 2592
97 Ga0207695_10174605 3300025913 Bacteria 2072
98 Ga0207671_10050576 3300025914 Bacteria 3077
99 Ga0207693_10000035 3300025915 Bacteria 110713
100 Ga0207649_10000790 3300025920 Bacteria 20471
101 Ga0207646_10009151 3300025922 Bacteria 9828
102 Ga0207681_10093658 3300025923 Bacteria 2151
103 Ga0207659_10024555 3300025926 Bacteria 4040
104 Ga0207700_10000037 3300025928 Bacteria 115488
105 Ga0207664_10016055 3300025929 Bacteria 5454
106 Ga0207706_10061532 3300025933 Bacteria 3306
107 Ga0207669_10009379 3300025937 Bacteria 4657
108 Ga0207691_10001226 3300025940 Bacteria 25547
109 Ga0207689_10075478 3300025942 Bacteria 2771
110 Ga0207679_10040475 3300025945 Bacteria 3336
111 Ga0207667_10018343 3300025949 Bacteria 7851
112 Ga0207639_10006879 3300026041 Bacteria 7747
113 Ga0207639_10009349 3300026041 Bacteria 6760
114 Ga0207678_10000101 3300026067 Bacteria 70507
115 Ga0207702_10000007 3300026078 Bacteria 332551
116 Ga0207702_10000012 3300026078 Bacteria 269770
117 Ga0207702_10002115 3300026078 Bacteria 19134
118 Ga0207648_10006232 3300026089 Bacteria 11876
119 Ga0207648_10116463 3300026089 Bacteria 2348
120 Ga0207674_10000107 3300026116 Bacteria 95635
121 Ga0207674_10119016 3300026116 Bacteria 2610
122 Ga0207675_100140669 3300026118 Bacteria 2293
123 Ga0209813_10000600 3300027866 Bacteria 8390
124 Ga0209813_10001748 3300027866 Bacteria 4893
125 Ga0207428_10011289 3300027907 Bacteria 7911
126 Ga0268264_10255970 3300028381 Bacteria 1628
127 Ga0265334_10006007 3300028573 Bacteria 5272
128 Ga0265338_10031484 3300028800 Bacteria 5200
129 Ga0265338_10065295 3300028800 Bacteria 3158
130 Ga0265328_10000290 3300031239 Bacteria 23522
131 Ga0265325_10000079 3300031241 Bacteria 67833
132 Ga0265325_10004280 3300031241 Bacteria 9053
133 Ga0265340_10000139 3300031247 Bacteria 36402
134 Ga0265339_10016075 3300031249 Bacteria 4470
135 Ga0265331_10000009 3300031250 Bacteria 314950
136 Ga0265331_10000181 3300031250 Bacteria 77026
137 Ga0265331_10000193 3300031250 Bacteria 75140
138 Ga0265331_10022134 3300031250 Bacteria 3246
139 Ga0265327_10000036 3300031251 Bacteria 312827
140 Ga0265316_10003200 3300031344 Bacteria 16640
141 Ga0265313_10003197 3300031595 Bacteria 13487
142 Ga0265313_10022409 3300031595 Bacteria 3426
143 Ga0316576_10030253 3300031727 Bacteria 3833
144 Ga0307413_10018603 3300031824 Bacteria 3651
145 Ga0307412_10004345 3300031911 Bacteria 7903
146 Ga0307414_10010671 3300032004 Bacteria 5347
147 Ga0307415_100079870 3300032126 Bacteria 2332
148 Ga0373934_0047277 3300035086 Bacteria 1702
149 Ga0373951_0006476 3300035091 Bacteria 2679
150 Ga0373953_0034900 3300035117 Bacteria 1974
151 Ga0373956_0007342 3300035119 Bacteria 4437
152 Ga0373955_0015567 3300035172 Bacteria 3726
153 Ga0373931_0000310 3300035691 Bacteria 20591
154 Ga0373935_0080728 3300035692 Bacteria 2113
155 Ga0373933_0133136 3300035724 Bacteria 1564
156 Ga0373937_0016020 3300036401 Bacteria 6648
157 Ga0316582_0097088 3300036647 Bacteria 1947
158 Ga0316584_0003972 3300036712 Bacteria 9727
159 Ga0395900_0072589 3300037418 Bacteria 3538
160 Ga0395898_0025067 3300037466 Bacteria 6013
161 Ga0400485_11109 3300038735 Unclassified 1987
162 Ga0400486_02705 3300038742 Unclassified 2829
163 Ga0466957_0042485 3300044842 Bacteria 2751
164 Ga0451576_0002899 3300045051 Bacteria 24471
165 Ga0451576_0019781 3300045051 Bacteria 7346
166 Ga0495603_0030779 3300046455 Bacteria 3232
167 Ga0495664_0031251 3300046477 Bacteria 3121
168 Ga0495584_0041498 3300046491 Bacteria 2323
169 Ga0495586_0048238 3300046535 Bacteria 2301
170 Ga0495622_0007319 3300046557 Bacteria 5124
171 Ga0495633_0007109 3300046558 Bacteria 6505
172 Ga0496102_0043857 3300048905 Bacteria 4057
173 Ga0496104_0005485 3300048907 Bacteria 11109
174 Ga0496105_0005119 3300048908 Bacteria 9939
175 Ga0496106_0006120 3300048909 Bacteria 8900
176 Ga0496106_0082223 3300048909 Bacteria 2475
177 Ga0496107_0001680 3300048910 Bacteria 13846
178 Ga0496108_0002802 3300048911 Bacteria 13977
179 Ga0496109_0001582 3300048912 Bacteria 19002
180 Ga0496109_0021052 3300048912 Bacteria 5766
181 Ga0496110_0012214 3300048913 Bacteria 7057
182 Ga0496111_0000898 3300048914 Bacteria 16203
183 Ga0496112_0022983 3300048915 Bacteria 5950
184 Ga0496113_0010858 3300048916 Bacteria 6043
185 Ga0496114_0075811 3300048917 Bacteria 2833
186 Ga0496115_0006040 3300048918 Bacteria 8843
187 Ga0496116_0011601 3300048919 Bacteria 7273
188 Ga0496122_0029255 3300048925 Bacteria 4651
189 Ga0496123_0001192 3300048926 Bacteria 38220
190 Ga0496125_0001862 3300048928 Bacteria 29008
191 Ga0501034_0000031 3300049571 Bacteria 244022
192 Ga0501037_0001066 3300049573 Bacteria 20347
193 Ga0501038_0035811 3300049574 Bacteria 4357
194 Ga0501039_0000538 3300049575 Bacteria 27508
195 Ga0501040_0003828 3300049576 Bacteria 9765
196 Ga0501040_0149640 3300049576 Bacteria 1646
197 Ga0501041_0006787 3300049577 Bacteria 6710
198 Ga0501046_0000011 3300049580 Bacteria 326457
199 Ga0501046_0011702 3300049580 Bacteria 7494
200 Ga0501046_0014098 3300049580 Bacteria 6750
201 Ga0501046_0119534 3300049580 Bacteria 2006
202 Ga0501047_0000175 3300049581 Bacteria 78925
203 Ga0501048_0001873 3300049582 Bacteria 15964
204 Ga0501048_0062907 3300049582 Bacteria 2626
205 Ga0501048_0130561 3300049582 Bacteria 1776
206 Ga0501067_0000475 3300049583 Bacteria 21843
207 Ga0501070_0002126 3300049586 Bacteria 17384
208 Ga0501070_0079141 3300049586 Bacteria 2720
209 Ga0501071_0055618 3300049587 Bacteria 2857
210 Ga0501071_0098111 3300049587 Bacteria 2158
211 Ga0501073_0033505 3300049589 Bacteria 3658
212 Ga0501074_0009514 3300049590 Bacteria 7059
213 Ga0501076_0001423 3300049592 Bacteria 16052
214 Ga0501079_0009848 3300049741 Bacteria 7251
215 Ga0501080_0000020 3300049742 Bacteria 91998
216 Ga0501081_0002400 3300049743 Bacteria 11806
217 Ga0501081_0006581 3300049743 Bacteria 7553
218 Ga0501083_0044332 3300049744 Bacteria 3011
219 Ga0501035_0000054 3300049822 Bacteria 142023
220 Ga0501044_0000013 3300049823 Bacteria 248795
221 Ga0501044_0111221 3300049823 Bacteria 2747
222 Ga0501044_0111650 3300049823 Bacteria 2741
223 Ga0501045_0002754 3300049824 Bacteria 12003
224 nmdc:mga03n38_14497_c1 3300050490 Bacteria 3022
225 nmdc:mga03n38_2574_c1 3300050490 Bacteria 5639
226 nmdc:mga00v17_3259_c1 3300050491 Bacteria 8365
227 nmdc:mga00v17_89290_c1 3300050491 Bacteria 1934
228 nmdc:mga0k408_31787_c1 3300050493 Bacteria 3016
229 nmdc:mga06z11_2900_c1 3300050494 Bacteria 6591
230 nmdc:mga04h51_2193_c1 3300050495 Bacteria 4587
231 nmdc:mga05p37_102130_c1 3300050507 Bacteria 3531
232 nmdc:mga05p37_12963_c1 3300050507 Bacteria 9972
233 nmdc:mga05p37_65712_c1 3300050507 Bacteria 4462
234 nmdc:mga09592_11165_c1 3300050508 Bacteria 7309
235 nmdc:mga09592_24151_c1 3300050508 Bacteria 5026
236 nmdc:mga0qj67_11028_c2 3300050509 Bacteria 6047
237 nmdc:mga0qj67_56761_c1 3300050509 Bacteria 3104
238 nmdc:mga0qj67_77507_c1 3300050509 Bacteria 2659
239 nmdc:mga06r32_135765_c1 3300050510 Bacteria 2435
240 nmdc:mga06r32_1698_c1 3300050510 Bacteria 19847
241 nmdc:mga06r32_19420_c1 3300050510 Bacteria 6237
242 nmdc:mga06r32_43593_c1 3300050510 Bacteria 4269
243 nmdc:mga08y16_14995_c1 3300050511 Bacteria 8152
244 nmdc:mga08y16_76918_c1 3300050511 Bacteria 3479
245 nmdc:mga0rr50_40169_c1 3300050513 Bacteria 3400
246 nmdc:mga08x19_38_c1 3300050514 Bacteria 159604
247 Ga0495612_0009717 3300053078 Bacteria 3897
248 Ga0495595_0046221 3300053084 Bacteria 2004
249 Ga0500644_0033768 3300053088 Bacteria 1645
250 Ga0500651_0014927 3300053093 Bacteria 4760
251 Ga0500555_001424 3300053103 Bacteria 7358
252 Ga0500556_0000385 3300053104 Bacteria 32296
253 Ga0500593_000027 3300053117 Bacteria 51606
254 Ga0500568_0000004 3300053139 Bacteria 621666
255 Ga0501084_0005049 3300054114 Bacteria 10796
256 Ga0501084_0009073 3300054114 Bacteria 8229
257 Ga0501084_0062198 3300054114 Bacteria 3125
258 Ga0501082_0016913 3300060353 Bacteria 6280
259 Ga0501082_0131320 3300060353 Bacteria 2173
260 Ga0530510_0030395 3300061734 Bacteria 3880
261 Ga0530510_0047494 3300061734 Bacteria 3102

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038735 Ga0400485_11109 Ga0400485_11109_674_1948 381
2 3300005548 Ga0070665_100091628 Ga0070665_1000916281 434
3 3300005843 Ga0068860_100031679 Ga0068860_1000316791 434
4 3300005937 Ga0081455_10003103 Ga0081455_100031038 445
5 3300038742 Ga0400486_02705 Ga0400486_02705_657_2141 445
6 3300009093 Ga0105240_10363536 Ga0105240_103635361 446
7 3300009093 Ga0105240_10366368 Ga0105240_103663681 446
8 3300025913 Ga0207695_10174605 Ga0207695_101746052 446
9 3300044842 Ga0466957_0042485 Ga0466957_0042485_121_1620 448
10 3300037418 Ga0395900_0072589 Ga0395900_0072589_93_1577 449
11 3300037466 Ga0395898_0025067 Ga0395898_0025067_2881_4365 449
12 iso_pu_bacteria 2545555834 2545678285 450
13 iso_pu_bacteria 2595698237 2596373248 450
14 iso_pu_bacteria 2889306138 2889307684 450
15 iso_pu_bacteria 2902330777 2902333365 450
16 iso_pu_bacteria 2902405164 2902407049 450
17 iso_pu_bacteria 2928125067 2928127229 450
18 iso_pu_bacteria 3003665799 3003666758 450
19 iso_pu_bacteria 641522639 641643337 450
20 iso_pu_bacteria 643348564 643597996 450
21 3300005468 Ga0070707_100007960 Ga0070707_1000079607 451
22 3300005471 Ga0070698_100062178 Ga0070698_1000621782 451
23 3300025922 Ga0207646_10009151 Ga0207646_100091517 451
24 iso_pu_bacteria 2829745981 2829746225 451
25 iso_pu_bacteria 2861691609 2861693264 451
26 3300006847 Ga0075431_100000519 Ga0075431_10000051917 452
27 3300009147 Ga0114129_10024112 Ga0114129_100241127 452
28 3300026089 Ga0207648_10116463 Ga0207648_101164632 452
29 3300049576 Ga0501040_0003828 Ga0501040_0003828_4266_5765 452
30 3300049577 Ga0501041_0006787 Ga0501041_0006787_3687_5186 452
31 3300049590 Ga0501074_0009514 Ga0501074_0009514_5226_6725 452
32 3300049592 Ga0501076_0001423 Ga0501076_0001423_10229_11728 452
33 3300049743 Ga0501081_0002400 Ga0501081_0002400_5293_6792 452
34 3300049744 Ga0501083_0044332 Ga0501083_0044332_363_1862 452
35 3300049824 Ga0501045_0002754 Ga0501045_0002754_7944_9443 452
36 3300050507 nmdc:mga05p37_65712_c1 nmdc:mga05p37_65712_c1_1662_3167 452
37 3300050509 nmdc:mga0qj67_11028_c2 nmdc:mga0qj67_11028_c2_3378_4883 452
38 3300050510 nmdc:mga06r32_43593_c1 nmdc:mga06r32_43593_c1_1619_3124 452
39 3300054114 Ga0501084_0005049 Ga0501084_0005049_8081_9580 452
40 3300061734 Ga0530510_0030395 Ga0530510_0030395_603_2102 452
41 iso_pu_bacteria 2738541281 2738744143 452
42 iso_pu_bacteria 2738543032 2739353373 452
43 iso_pu_bacteria 2909042592 2909046837 452
44 iso_pu_bacteria 8002060224 8002060345 452
45 3300005545 Ga0070695_100071383 Ga0070695_1000713832 453
46 3300006844 Ga0075428_100050819 Ga0075428_1000508193 453
47 3300006847 Ga0075431_100000736 Ga0075431_10000073627 453
48 3300006880 Ga0075429_100025567 Ga0075429_1000255672 453
49 3300009147 Ga0114129_10005469 Ga0114129_100054692 453
50 3300009553 Ga0105249_10140607 Ga0105249_101406072 453
51 3300035086 Ga0373934_0047277 Ga0373934_0047277_35_1537 453
52 3300035117 Ga0373953_0034900 Ga0373953_0034900_63_1565 453
53 3300035119 Ga0373956_0007342 Ga0373956_0007342_2857_4359 453
54 3300035172 Ga0373955_0015567 Ga0373955_0015567_946_2448 453
55 3300035692 Ga0373935_0080728 Ga0373935_0080728_93_1595 453
56 3300035724 Ga0373933_0133136 Ga0373933_0133136_27_1529 453
57 3300036647 Ga0316582_0097088 Ga0316582_0097088_149_1657 453
58 3300046477 Ga0495664_0031251 Ga0495664_0031251_512_2014 453
59 3300049576 Ga0501040_0149640 Ga0501040_0149640_47_1528 453
60 3300050507 nmdc:mga05p37_12963_c1 nmdc:mga05p37_12963_c1_6857_8356 453
61 3300050508 nmdc:mga09592_24151_c1 nmdc:mga09592_24151_c1_1585_3063 453
62 3300050510 nmdc:mga06r32_1698_c1 nmdc:mga06r32_1698_c1_5908_7386 453
63 3300053078 Ga0495612_0009717 Ga0495612_0009717_1283_2785 453
64 3300053084 Ga0495595_0046221 Ga0495595_0046221_136_1638 453
65 3300053103 Ga0500555_001424 Ga0500555_001424_5426_6931 453
66 3300054114 Ga0501084_0062198 Ga0501084_0062198_1556_3037 453
67 3300005337 Ga0070682_100024225 Ga0070682_1000242253 454
68 3300005341 Ga0070691_10033443 Ga0070691_100334432 454
69 3300005455 Ga0070663_100007572 Ga0070663_1000075722 454
70 3300005458 Ga0070681_10007438 Ga0070681_100074387 454
71 3300005539 Ga0068853_100033467 Ga0068853_1000334672 454
72 3300005545 Ga0070695_100001088 Ga0070695_10000108816 454
73 3300005546 Ga0070696_100009933 Ga0070696_1000099334 454
74 3300005547 Ga0070693_100016025 Ga0070693_1000160254 454
75 3300005564 Ga0070664_100112465 Ga0070664_1001124652 454
76 3300005577 Ga0068857_100091077 Ga0068857_1000910771 454
77 3300005615 Ga0070702_100027639 Ga0070702_1000276392 454
78 3300005844 Ga0068862_100017614 Ga0068862_1000176142 454
79 3300005937 Ga0081455_10000042 Ga0081455_1000004269 454
80 3300005983 Ga0081540_1000024 Ga0081540_100002459 454
81 3300005983 Ga0081540_1044220 Ga0081540_10442201 454
82 3300006048 Ga0075363_100012262 Ga0075363_1000122624 454
83 3300006051 Ga0075364_10001556 Ga0075364_100015568 454
84 3300006178 Ga0075367_10012632 Ga0075367_100126322 454
85 3300006844 Ga0075428_100009290 Ga0075428_1000092908 454
86 3300006846 Ga0075430_100065980 Ga0075430_1000659802 454
87 3300006847 Ga0075431_100008710 Ga0075431_1000087108 454
88 3300006847 Ga0075431_100027362 Ga0075431_1000273625 454
89 3300006852 Ga0075433_10094524 Ga0075433_100945242 454
90 3300006880 Ga0075429_100161789 Ga0075429_1001617892 454
91 3300009094 Ga0111539_10003352 Ga0111539_1000335213 454
92 3300009094 Ga0111539_10004045 Ga0111539_1000404511 454
93 3300009094 Ga0111539_10091720 Ga0111539_100917202 454
94 3300009147 Ga0114129_10057618 Ga0114129_100576182 454
95 3300009147 Ga0114129_10308611 Ga0114129_103086112 454
96 3300009147 Ga0114129_10377709 Ga0114129_103777091 454
97 3300010375 Ga0105239_10190033 Ga0105239_101900331 454
98 3300013308 Ga0157375_10018116 Ga0157375_100181161 454
99 3300014968 Ga0157379_10037494 Ga0157379_100374943 454
100 3300025907 Ga0207645_10067450 Ga0207645_100674502 454
101 3300025912 Ga0207707_10095909 Ga0207707_100959091 454
102 3300025914 Ga0207671_10050576 Ga0207671_100505762 454
103 3300025933 Ga0207706_10061532 Ga0207706_100615322 454
104 3300025942 Ga0207689_10075478 Ga0207689_100754782 454
105 3300026041 Ga0207639_10009349 Ga0207639_100093492 454
106 3300026067 Ga0207678_10000101 Ga0207678_100001014 454
107 3300026116 Ga0207674_10119016 Ga0207674_101190162 454
108 3300026118 Ga0207675_100140669 Ga0207675_1001406691 454
109 3300027866 Ga0209813_10000600 Ga0209813_100006006 454
110 3300027866 Ga0209813_10001748 Ga0209813_100017485 454
111 3300027907 Ga0207428_10011289 Ga0207428_100112899 454
112 3300028381 Ga0268264_10255970 Ga0268264_102559701 454
113 3300031241 Ga0265325_10004280 Ga0265325_100042803 454
114 3300031249 Ga0265339_10016075 Ga0265339_100160752 454
115 3300031727 Ga0316576_10030253 Ga0316576_100302532 454
116 3300032126 Ga0307415_100079870 Ga0307415_1000798702 454
117 3300035091 Ga0373951_0006476 Ga0373951_0006476_632_2137 454
118 3300035691 Ga0373931_0000310 Ga0373931_0000310_6311_7816 454
119 3300036712 Ga0316584_0003972 Ga0316584_0003972_1966_3795 454
120 3300046491 Ga0495584_0041498 Ga0495584_0041498_282_1787 454
121 3300048907 Ga0496104_0005485 Ga0496104_0005485_3446_4960 454
122 3300048908 Ga0496105_0005119 Ga0496105_0005119_5350_6864 454
123 3300048909 Ga0496106_0006120 Ga0496106_0006120_6506_8014 454
124 3300048909 Ga0496106_0082223 Ga0496106_0082223_798_2309 454
125 3300048910 Ga0496107_0001680 Ga0496107_0001680_5962_7470 454
126 3300048911 Ga0496108_0002802 Ga0496108_0002802_7269_8783 454
127 3300048912 Ga0496109_0001582 Ga0496109_0001582_605_2119 454
128 3300048912 Ga0496109_0021052 Ga0496109_0021052_2363_3874 454
129 3300048913 Ga0496110_0012214 Ga0496110_0012214_1215_2729 454
130 3300048914 Ga0496111_0000898 Ga0496111_0000898_14110_15624 454
131 3300048915 Ga0496112_0022983 Ga0496112_0022983_1235_2749 454
132 3300048916 Ga0496113_0010858 Ga0496113_0010858_2315_3829 454
133 3300048917 Ga0496114_0075811 Ga0496114_0075811_356_1864 454
134 3300048918 Ga0496115_0006040 Ga0496115_0006040_6892_8400 454
135 3300049571 Ga0501034_0000031 Ga0501034_0000031_147644_149152 454
136 3300049573 Ga0501037_0001066 Ga0501037_0001066_11550_13058 454
137 3300049574 Ga0501038_0035811 Ga0501038_0035811_1921_3429 454
138 3300049575 Ga0501039_0000538 Ga0501039_0000538_4409_5917 454
139 3300049580 Ga0501046_0000011 Ga0501046_0000011_63227_64735 454
140 3300049580 Ga0501046_0011702 Ga0501046_0011702_96_1604 454
141 3300049581 Ga0501047_0000175 Ga0501047_0000175_60756_62264 454
142 3300049582 Ga0501048_0001873 Ga0501048_0001873_13366_14874 454
143 3300049583 Ga0501067_0000475 Ga0501067_0000475_10339_11847 454
144 3300049586 Ga0501070_0002126 Ga0501070_0002126_1896_3404 454
145 3300049587 Ga0501071_0055618 Ga0501071_0055618_233_1729 454
146 3300049589 Ga0501073_0033505 Ga0501073_0033505_112_1620 454
147 3300049741 Ga0501079_0009848 Ga0501079_0009848_3873_5369 454
148 3300049742 Ga0501080_0000020 Ga0501080_0000020_16116_17624 454
149 3300049743 Ga0501081_0006581 Ga0501081_0006581_2073_3569 454
150 3300049822 Ga0501035_0000054 Ga0501035_0000054_20334_21842 454
151 3300049823 Ga0501044_0000013 Ga0501044_0000013_151798_153306 454
152 3300049823 Ga0501044_0111221 Ga0501044_0111221_1070_2578 454
153 3300049823 Ga0501044_0111650 Ga0501044_0111650_506_2014 454
154 3300050490 nmdc:mga03n38_14497_c1 nmdc:mga03n38_14497_c1_973_2484 454
155 3300050490 nmdc:mga03n38_2574_c1 nmdc:mga03n38_2574_c1_2324_3841 454
156 3300050491 nmdc:mga00v17_3259_c1 nmdc:mga00v17_3259_c1_298_1809 454
157 3300050494 nmdc:mga06z11_2900_c1 nmdc:mga06z11_2900_c1_2149_3660 454
158 3300050495 nmdc:mga04h51_2193_c1 nmdc:mga04h51_2193_c1_1497_3014 454
159 3300050507 nmdc:mga05p37_102130_c1 nmdc:mga05p37_102130_c1_273_1787 454
160 3300050508 nmdc:mga09592_11165_c1 nmdc:mga09592_11165_c1_5396_6904 454
161 3300050509 nmdc:mga0qj67_56761_c1 nmdc:mga0qj67_56761_c1_963_2474 454
162 3300050510 nmdc:mga06r32_135765_c1 nmdc:mga06r32_135765_c1_679_2187 454
163 3300050510 nmdc:mga06r32_19420_c1 nmdc:mga06r32_19420_c1_3718_5229 454
164 3300050511 nmdc:mga08y16_14995_c1 nmdc:mga08y16_14995_c1_1014_2522 454
165 3300050511 nmdc:mga08y16_76918_c1 nmdc:mga08y16_76918_c1_906_2417 454
166 3300053104 Ga0500556_0000385 Ga0500556_0000385_22814_24319 454
167 3300054114 Ga0501084_0009073 Ga0501084_0009073_2272_3768 454
168 3300060353 Ga0501082_0016913 Ga0501082_0016913_2117_3613 454
169 3300060353 Ga0501082_0131320 Ga0501082_0131320_181_1689 454
170 3300061734 Ga0530510_0047494 Ga0530510_0047494_1487_2983 454
171 iso_pu_bacteria 2917554339 2917556542 454
172 3300036401 Ga0373937_0016020 Ga0373937_0016020_2220_3737 455
173 3300046455 Ga0495603_0030779 Ga0495603_0030779_744_2297 455
174 3300046557 Ga0495622_0007319 Ga0495622_0007319_1526_3079 455
175 3300049580 Ga0501046_0119534 Ga0501046_0119534_427_1899 455
176 3300049582 Ga0501048_0130561 Ga0501048_0130561_291_1763 455
177 3300049582 Ga0501048_0062907 Ga0501048_0062907_82_1623 456
178 iso_pu_bacteria 2523231067 2523470087 456
179 iso_pu_bacteria 2738543031 2739350816 456
180 3300005340 Ga0070689_100003088 Ga0070689_1000030885 457
181 3300005353 Ga0070669_100010386 Ga0070669_1000103861 457
182 3300005354 Ga0070675_100034402 Ga0070675_1000344022 457
183 3300005356 Ga0070674_100002336 Ga0070674_1000023364 457
184 3300005364 Ga0070673_100033208 Ga0070673_1000332082 457
185 3300005458 Ga0070681_10007760 Ga0070681_100077604 457
186 3300005518 Ga0070699_100104862 Ga0070699_1001048623 457
187 3300005539 Ga0068853_100062395 Ga0068853_1000623952 457
188 3300005543 Ga0070672_100012339 Ga0070672_1000123392 457
189 3300005544 Ga0070686_100095552 Ga0070686_1000955521 457
190 3300005545 Ga0070695_100028119 Ga0070695_1000281193 457
191 3300005577 Ga0068857_100000722 Ga0068857_10000072219 457
192 3300005614 Ga0068856_100001945 Ga0068856_10000194514 457
193 3300005616 Ga0068852_100036121 Ga0068852_1000361213 457
194 3300006358 Ga0068871_100097090 Ga0068871_1000970902 457
195 3300009545 Ga0105237_10001328 Ga0105237_100013282 457
196 3300009551 Ga0105238_10001436 Ga0105238_1000143619 457
197 3300013307 Ga0157372_10009220 Ga0157372_100092201 457
198 3300014326 Ga0157380_10140843 Ga0157380_101408431 457
199 3300014968 Ga0157379_10043536 Ga0157379_100435363 457
200 3300025907 Ga0207645_10012101 Ga0207645_100121013 457
201 3300025923 Ga0207681_10093658 Ga0207681_100936582 457
202 3300025926 Ga0207659_10024555 Ga0207659_100245552 457
203 3300025937 Ga0207669_10009379 Ga0207669_100093793 457
204 3300025940 Ga0207691_10001226 Ga0207691_100012267 457
205 3300025949 Ga0207667_10018343 Ga0207667_100183436 457
206 3300026041 Ga0207639_10006879 Ga0207639_100068796 457
207 3300026078 Ga0207702_10002115 Ga0207702_1000211519 457
208 3300026089 Ga0207648_10006232 Ga0207648_100062323 457
209 3300026116 Ga0207674_10000107 Ga0207674_100001076 457
210 3300005435 Ga0070714_100020056 Ga0070714_1000200565 458
211 3300005436 Ga0070713_100000002 Ga0070713_10000000244 458
212 3300005564 Ga0070664_100020040 Ga0070664_1000200406 458
213 3300005614 Ga0068856_100000312 Ga0068856_10000031214 458
214 3300006048 Ga0075363_100006153 Ga0075363_1000061532 458
215 3300006051 Ga0075364_10002581 Ga0075364_100025812 458
216 3300006175 Ga0070712_100000045 Ga0070712_10000004530 458
217 3300006177 Ga0075362_10000893 Ga0075362_100008937 458
218 3300006195 Ga0075366_10003575 Ga0075366_100035751 458
219 3300006914 Ga0075436_100000255 Ga0075436_10000025525 458
220 3300009093 Ga0105240_10004492 Ga0105240_100044922 458
221 3300009094 Ga0111539_10034132 Ga0111539_100341322 458
222 3300013100 Ga0157373_10005154 Ga0157373_100051543 458
223 3300013105 Ga0157369_10001118 Ga0157369_1000111832 458
224 3300014968 Ga0157379_10010346 Ga0157379_100103463 458
225 3300025906 Ga0207699_10000133 Ga0207699_1000013314 458
226 3300025915 Ga0207693_10000035 Ga0207693_1000003597 458
227 3300025928 Ga0207700_10000037 Ga0207700_1000003728 458
228 3300025929 Ga0207664_10016055 Ga0207664_100160555 458
229 3300025945 Ga0207679_10040475 Ga0207679_100404751 458
230 3300026078 Ga0207702_10000007 Ga0207702_10000007155 458
231 3300026078 Ga0207702_10000012 Ga0207702_1000001286 458
232 3300028800 Ga0265338_10031484 Ga0265338_100314844 458
233 3300031239 Ga0265328_10000290 Ga0265328_100002902 458
234 3300031241 Ga0265325_10000079 Ga0265325_1000007921 458
235 3300031250 Ga0265331_10000009 Ga0265331_10000009128 458
236 3300031250 Ga0265331_10000181 Ga0265331_1000018151 458
237 3300031595 Ga0265313_10003197 Ga0265313_100031974 458
238 3300046535 Ga0495586_0048238 Ga0495586_0048238_28_1536 458
239 3300048905 Ga0496102_0043857 Ga0496102_0043857_1003_2526 458
240 3300050491 nmdc:mga00v17_89290_c1 nmdc:mga00v17_89290_c1_371_1894 458
241 3300050493 nmdc:mga0k408_31787_c1 nmdc:mga0k408_31787_c1_465_1988 458
242 3300050513 nmdc:mga0rr50_40169_c1 nmdc:mga0rr50_40169_c1_836_2359 458
243 3300050514 nmdc:mga08x19_38_c1 nmdc:mga08x19_38_c1_141501_143024 458
244 iso_pu_bacteria 2643221663 2644353741 458
245 iso_pu_bacteria 2928972540 2928972735 458
246 iso_pu_bacteria 2977240413 2977242516 458
247 3300005344 Ga0070661_100003574 Ga0070661_1000035744 459
248 3300009093 Ga0105240_10192596 Ga0105240_101925962 459
249 3300025920 Ga0207649_10000790 Ga0207649_1000079021 459
250 3300028800 Ga0265338_10065295 Ga0265338_100652953 459
251 3300031247 Ga0265340_10000139 Ga0265340_1000013919 459
252 3300031250 Ga0265331_10000193 Ga0265331_1000019312 459
253 3300031251 Ga0265327_10000036 Ga0265327_10000036283 459
254 3300031344 Ga0265316_10003200 Ga0265316_100032006 459
255 3300031824 Ga0307413_10018603 Ga0307413_100186033 459
256 3300049580 Ga0501046_0014098 Ga0501046_0014098_4829_6337 459
257 3300049586 Ga0501070_0079141 Ga0501070_0079141_371_1879 459
258 3300050509 nmdc:mga0qj67_77507_c1 nmdc:mga0qj67_77507_c1_466_1974 459
259 3300013307 Ga0157372_10003118 Ga0157372_1000311814 460
260 3300028573 Ga0265334_10006007 Ga0265334_100060071 460
261 3300031250 Ga0265331_10022134 Ga0265331_100221342 460
262 3300031595 Ga0265313_10022409 Ga0265313_100224094 460
263 3300045051 Ga0451576_0002899 Ga0451576_0002899_2955_4532 460
264 3300045051 Ga0451576_0019781 Ga0451576_0019781_325_1893 460
265 3300049587 Ga0501071_0098111 Ga0501071_0098111_32_1615 460
266 3300053117 Ga0500593_000027 Ga0500593_000027_31318_32796 461
267 3300053139 Ga0500568_0000004 Ga0500568_0000004_266979_268490 461
268 iso_pu_bacteria 2643221699 2644548494 461
269 3300003578 Ga0006562J51391_1167918 Ga0006562J51391_11679181 462
270 3300003794 Ga0055531_10005523 Ga0055531_100055236 462
271 3300013105 Ga0157369_10016286 Ga0157369_100162869 462
272 3300025292 Ga0209676_1000182 Ga0209676_100018210 462
273 3300025298 Ga0209050_1005142 Ga0209050_10051426 462
274 3300025304 Ga0209257_1000484 Ga0209257_100048411 462
275 3300031911 Ga0307412_10004345 Ga0307412_100043452 462
276 3300032004 Ga0307414_10010671 Ga0307414_100106717 462
277 3300046558 Ga0495633_0007109 Ga0495633_0007109_3053_4504 462
278 3300048919 Ga0496116_0011601 Ga0496116_0011601_2454_3911 462
279 3300048925 Ga0496122_0029255 Ga0496122_0029255_1728_3179 462
280 3300048926 Ga0496123_0001192 Ga0496123_0001192_27270_28721 462
281 3300048928 Ga0496125_0001862 Ga0496125_0001862_19140_20597 462
282 3300053088 Ga0500644_0033768 Ga0500644_0033768_37_1521 462
283 3300053093 Ga0500651_0014927 Ga0500651_0014927_3167_4651 462

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

254

421

0.98

PF02954

HTH_8

Bacterial regulatory protein, Fis family

561

602

0.98

PF00072

Response_reg

Response regulator receiver domain

113

226

0.97

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

258

425

0.88

PF07728

AAA_5

AAA domain (dynein-related subfamily)

277

415

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9722 3 121
4kny-assembly1.cif.gz_A crystal structure of the response regulator kdpe complexed to dna in an active-like conformation 0.9719 1 120
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9711 3 121
4qhs-assembly1.cif.gz_F crystal structure of aaa+sigma 54 activator domain of the flagellar regulatory protein flrc of vibrio cholerae in nucleotide free state 0.9706 144 376
5ep2-assembly1.cif.gz_A quorum-sensing signal integrator luxo - catalytic domain in complex with azau inhibitor 0.9705 144 386
ID Description Score Start End Superfamily
af_Q06065_316_382_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9934 315 380 1.10.8.60
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9789 144 311 3.40.50.300
1ny6B02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9701 316 385 1.10.8.60
1ny5B03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9699 318 387 1.10.8.60
1ojlB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9661 144 315 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A529FBT6-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9903 180 303 GO:0005524
GO:0006355
AF-A0A1E8GQ16-F1-model_v4 DNA-binding response regulator 0.9754 1 120 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A529FBT6-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9748 180 303 GO:0005524
GO:0006355
AF-A0A017HGR7-F1-model_v4 DNA-binding protein response regulator CtrA 0.9702 4 123 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2V9X8R0-F1-model_v4 DNA-binding response regulator 0.9687 4 123 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
90.07 0.72 High
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Predicted Structure (AlphaFold2)

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