F385683

General Info

Members Datasets Scaffolds Average Seq Length
283 104 566 157

Family's Representative Sequence

Representative Sequence 3300032168|Ga0316593_10044285|Ga0316593_100442851
Length 168
Sequence MTTIDFSPLFRSMIGFDRLSNALETAYRTEPGGYPPYNVEVRGENDYRITMAVAGFAQNELNLETHENVLTVSGARSEEEKQDTKFLYRGIANRSFERKFQLADYVRVIDARLENGLLHIELRREIPEAMKPRSIQIRGDGGKLIEGQTEADPGTQTEAAQKQEREAA

Samples

Sample ID Description Type Environment
1 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
23 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
24 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
25 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
26 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
27 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
37 3300029277 Sorghum rhizosphere microbial communities from UC West Side Research & Extension Center, Five Points, CA, USA - TP3.B3.ctcc.R1 Metatranscriptome Rhizosphere
38 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
39 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
40 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
41 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
42 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
43 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
44 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
45 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
46 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
47 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
52 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
53 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
56 3300041457 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaT Metatranscriptome Rhizoplane
57 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
58 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
59 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
60 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
61 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
62 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
63 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
64 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
65 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
66 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
67 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
68 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
69 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
70 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
71 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
72 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
75 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
76 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
77 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
78 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
79 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300049131 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_B_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300049541 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
87 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
88 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
89 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
90 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
91 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
92 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
93 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
94 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300059604 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 63R_AD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
97 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
98 2643221584 Caulobacter sp. Root656 Isolate Unclassified
99 2643221640 Caulobacter sp. Root342 Isolate Unclassified
100 2643221642 Caulobacter sp. Root343 Isolate Unclassified
101 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
102 2818991435 Caulobacter henricii 536 Isolate Unclassified
103 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
104 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 51.24
Metatranscriptomes 44.88
Isolates 3.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.13
Nodule 0
Rhizoplane 1.41
Rhizosphere 84.45
Stem 0
Stem Tuber 0
Unclassified 2.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316593_10044285 3300032168 Bacteria 1489
2 JGI25157J39369_1012925 3300002741 Bacteria 1057
3 rootL2_10027791 3300003322 Bacteria 4356
4 rootL2_10027792 3300003322 Bacteria 1591
5 rootH1_10360196 3300003323 Bacteria 1156
6 Ga0055526_1011670 3300003771 Bacteria 3929
7 Ga0055526_1032529 3300003771 Bacteria 1469
8 Ga0055526_1060263 3300003771 Bacteria 812
9 Ga0055524_1028301 3300003775 Bacteria 1681
10 Ga0055531_10002888 3300003794 Bacteria 11186
11 Ga0065165_1002050 3300005262 Bacteria 18672
12 Ga0070658_10149834 3300005327 Bacteria 1953
13 Ga0070671_100338682 3300005355 Bacteria 1283
14 Ga0070667_100280929 3300005367 Bacteria 1495
15 Ga0068853_100575527 3300005539 Unclassified 1068
16 Ga0070665_100000752 3300005548 Bacteria 43043
17 Ga0070665_100112059 3300005548 Bacteria 2731
18 Ga0070665_100392060 3300005548 Bacteria 1396
19 Ga0068859_100569800 3300005617 Bacteria 1226
20 Ga0075365_10297592 3300006038 Bacteria 1135
21 Ga0075363_100458674 3300006048 Bacteria 753
22 Ga0075366_10037520 3300006195 Bacteria 2861
23 Ga0097620_100569845 3300006931 Bacteria 1226
24 Ga0105240_10028404 3300009093 Bacteria 7308
25 Ga0105240_10345285 3300009093 Bacteria 1690
26 Ga0105241_10551075 3300009174 Bacteria 1035
27 Ga0105238_10001217 3300009551 Bacteria 25923
28 Ga0157380_10479635 3300014326 Bacteria 1202
29 Ga0163161_11428389 3300017792 Bacteria 605
30 Ga0209026_1000929 3300025250 Bacteria 14890
31 Ga0209564_1002688 3300025295 Bacteria 13470
32 Ga0209564_1031456 3300025295 Bacteria 1621
33 Ga0209256_1000535 3300025299 Bacteria 55077
34 Ga0209256_1026161 3300025299 Bacteria 1686
35 Ga0209257_1000074 3300025304 Bacteria 325641
36 Ga0209257_1000242 3300025304 Bacteria 126891
37 Ga0207695_10018339 3300025913 Bacteria 8095
38 Ga0207695_10287504 3300025913 Bacteria 1537
39 Ga0207694_10001272 3300025924 Bacteria 21736
40 Ga0207644_10551647 3300025931 Bacteria 954
41 Ga0207661_11366775 3300025944 Bacteria 650
42 Ga0207640_11161755 3300025981 Bacteria 685
43 Ga0207703_11320178 3300026035 Bacteria 694
44 Ga0207639_11191914 3300026041 Unclassified 715
45 Ga0268266_10000744 3300028379 Bacteria 43632
46 Ga0268266_10948386 3300028379 Bacteria 832
47 Ga0307515_10017956 3300028794 Bacteria 12844
48 Ga0307515_10020184 3300028794 Bacteria 11913
49 Ga0311001_1068785 3300029277 Bacteria 593
50 Ga0316575_10008261 3300031665 Bacteria 3785
51 Ga0316575_10150225 3300031665 Bacteria 961
52 Ga0316579_10004346 3300031691 Bacteria 5616
53 Ga0316579_10007476 3300031691 Bacteria 4514
54 Ga0316579_10015890 3300031691 Bacteria 3277
55 Ga0316579_10025135 3300031691 Bacteria 2687
56 Ga0316579_10089452 3300031691 Bacteria 1470
57 Ga0316576_10010204 3300031727 Bacteria 6093
58 Ga0316576_10011831 3300031727 Bacteria 5738
59 Ga0316576_10031512 3300031727 Bacteria 3762
60 Ga0316576_10056884 3300031727 Bacteria 2857
61 Ga0316576_10116959 3300031727 Bacteria 2000
62 Ga0316576_10137830 3300031727 Bacteria 1836
63 Ga0316576_10272819 3300031727 Bacteria 1267
64 Ga0316576_10428377 3300031727 Bacteria 978
65 Ga0316578_10001515 3300031728 Bacteria 9523
66 Ga0316578_10002374 3300031728 Bacteria 8224
67 Ga0316578_10006017 3300031728 Bacteria 5944
68 Ga0316578_10019744 3300031728 Bacteria 3716
69 Ga0316578_10020863 3300031728 Bacteria 3627
70 Ga0316578_10036455 3300031728 Bacteria 2830
71 Ga0316578_10120146 3300031728 Bacteria 1579
72 Ga0316577_10000040 3300031733 Bacteria 28628
73 Ga0316577_10021314 3300031733 Bacteria 3595
74 Ga0316577_10022056 3300031733 Bacteria 3534
75 Ga0316577_10052746 3300031733 Bacteria 2269
76 Ga0316583_10005101 3300032133 Bacteria 4704
77 Ga0316583_10043947 3300032133 Bacteria 1579
78 Ga0316585_10000744 3300032137 Bacteria 8201
79 Ga0316585_10038306 3300032137 Bacteria 1523
80 Ga0316585_10059234 3300032137 Bacteria 1235
81 Ga0316580_10000263 3300032139 Bacteria 11192
82 Ga0316580_10005031 3300032139 Bacteria 3847
83 Ga0316580_10005928 3300032139 Bacteria 3585
84 Ga0316580_10082900 3300032139 Bacteria 980
85 Ga0316580_10114132 3300032139 Bacteria 827
86 Ga0316580_10174045 3300032139 Bacteria 661
87 Ga0316593_10000268 3300032168 Bacteria 8682
88 Ga0316593_10011410 3300032168 Bacteria 2580
89 Ga0316593_10014845 3300032168 Bacteria 2333
90 Ga0316593_10017350 3300032168 Bacteria 2195
91 Ga0316593_10021018 3300032168 Bacteria 2036
92 Ga0316593_10034805 3300032168 Bacteria 1654
93 Ga0316593_10038841 3300032168 Bacteria 1577
94 Ga0316593_10054100 3300032168 Bacteria 1361
95 Ga0316593_10056334 3300032168 Bacteria 1337
96 Ga0316593_10080552 3300032168 Bacteria 1136
97 Ga0316593_10129786 3300032168 Bacteria 909
98 Ga0316593_10143525 3300032168 Bacteria 866
99 Ga0316593_10164140 3300032168 Bacteria 812
100 Ga0316593_10177735 3300032168 Bacteria 782
101 Ga0316593_10187617 3300032168 Bacteria 761
102 Ga0316593_10263768 3300032168 Bacteria 646
103 Ga0316593_10342129 3300032168 Bacteria 571
104 Ga0316593_10342609 3300032168 Bacteria 571
105 Ga0316593_10353733 3300032168 Bacteria 562
106 Ga0316592_1003642 3300033524 Bacteria 2797
107 Ga0316592_1003708 3300033524 Bacteria 2780
108 Ga0316592_1010148 3300033524 Bacteria 1894
109 Ga0316592_1011407 3300033524 Bacteria 1807
110 Ga0316592_1013029 3300033524 Bacteria 1710
111 Ga0316592_1031630 3300033524 Bacteria 1153
112 Ga0316592_1037134 3300033524 Bacteria 1072
113 Ga0316592_1057398 3300033524 Bacteria 872
114 Ga0316592_1062393 3300033524 Bacteria 838
115 Ga0316592_1066010 3300033524 Bacteria 815
116 Ga0316592_1073700 3300033524 Bacteria 773
117 Ga0316592_1076286 3300033524 Bacteria 760
118 Ga0316592_1076570 3300033524 Bacteria 759
119 Ga0316592_1093575 3300033524 Bacteria 689
120 Ga0316592_1105334 3300033524 Bacteria 650
121 Ga0316592_1105807 3300033524 Bacteria 649
122 Ga0316592_1127919 3300033524 Bacteria 592
123 Ga0316592_1128746 3300033524 Bacteria 590
124 Ga0316592_1131845 3300033524 Bacteria 583
125 Ga0316592_1133529 3300033524 Bacteria 580
126 Ga0316592_1145294 3300033524 Bacteria 558
127 Ga0316592_1146506 3300033524 Bacteria 556
128 Ga0316586_1005241 3300033527 Bacteria 1812
129 Ga0316586_1005322 3300033527 Bacteria 1802
130 Ga0316586_1009512 3300033527 Bacteria 1457
131 Ga0316586_1011494 3300033527 Bacteria 1357
132 Ga0316586_1064767 3300033527 Bacteria 668
133 Ga0316586_1065011 3300033527 Bacteria 667
134 Ga0316586_1068287 3300033527 Bacteria 653
135 Ga0316586_1078225 3300033527 Bacteria 615
136 Ga0316586_1085376 3300033527 Bacteria 592
137 Ga0316586_1088607 3300033527 Bacteria 583
138 Ga0316586_1088703 3300033527 Bacteria 583
139 Ga0316586_1092266 3300033527 Bacteria 573
140 Ga0316586_1097991 3300033527 Bacteria 558
141 Ga0316586_1099731 3300033527 Bacteria 554
142 Ga0316588_1000223 3300033528 Bacteria 6770
143 Ga0316588_1000392 3300033528 Bacteria 5780
144 Ga0316588_1004586 3300033528 Bacteria 2630
145 Ga0316588_1021144 3300033528 Bacteria 1478
146 Ga0316588_1021172 3300033528 Bacteria 1478
147 Ga0316588_1037890 3300033528 Bacteria 1148
148 Ga0316588_1055920 3300033528 Bacteria 960
149 Ga0316588_1092021 3300033528 Bacteria 756
150 Ga0316588_1101888 3300033528 Bacteria 719
151 Ga0316588_1102683 3300033528 Bacteria 716
152 Ga0316588_1119584 3300033528 Bacteria 666
153 Ga0316588_1121166 3300033528 Unclassified 662
154 Ga0316588_1133461 3300033528 Bacteria 632
155 Ga0316588_1141519 3300033528 Bacteria 615
156 Ga0316588_1157809 3300033528 Bacteria 583
157 Ga0316588_1160346 3300033528 Bacteria 579
158 Ga0316588_1162364 3300033528 Bacteria 576
159 Ga0316588_1171961 3300033528 Bacteria 560
160 Ga0316588_1172298 3300033528 Bacteria 560
161 Ga0316588_1179493 3300033528 Bacteria 549
162 Ga0316588_1192349 3300033528 Bacteria 532
163 Ga0316588_1213948 3300033528 Unclassified 506
164 Ga0316587_1004297 3300033529 Bacteria 2066
165 Ga0316587_1014839 3300033529 Bacteria 1289
166 Ga0316587_1038060 3300033529 Bacteria 864
167 Ga0316587_1049178 3300033529 Bacteria 770
168 Ga0316587_1055492 3300033529 Bacteria 730
169 Ga0316587_1058850 3300033529 Bacteria 710
170 Ga0316587_1075409 3300033529 Bacteria 634
171 Ga0316587_1079157 3300033529 Bacteria 620
172 Ga0316587_1094350 3300033529 Bacteria 573
173 Ga0316587_1099528 3300033529 Bacteria 559
174 Ga0316587_1099723 3300033529 Bacteria 558
175 Ga0316587_1100309 3300033529 Bacteria 557
176 Ga0316587_1110393 3300033529 Bacteria 534
177 Ga0316596_1000416 3300033541 Bacteria 7104
178 Ga0316596_1001697 3300033541 Bacteria 4552
179 Ga0316596_1005124 3300033541 Bacteria 2979
180 Ga0316596_1016473 3300033541 Bacteria 1852
181 Ga0316596_1019364 3300033541 Bacteria 1727
182 Ga0316596_1019381 3300033541 Bacteria 1726
183 Ga0316596_1021829 3300033541 Bacteria 1634
184 Ga0316596_1024730 3300033541 Bacteria 1543
185 Ga0316596_1070097 3300033541 Bacteria 938
186 Ga0316596_1082417 3300033541 Bacteria 865
187 Ga0316596_1086159 3300033541 Bacteria 845
188 Ga0316596_1105730 3300033541 Bacteria 762
189 Ga0316596_1122743 3300033541 Bacteria 708
190 Ga0316596_1126951 3300033541 Bacteria 695
191 Ga0316596_1130595 3300033541 Bacteria 686
192 Ga0316596_1138106 3300033541 Bacteria 667
193 Ga0316596_1144911 3300033541 Bacteria 651
194 Ga0316596_1147509 3300033541 Bacteria 645
195 Ga0316596_1147804 3300033541 Bacteria 645
196 Ga0316596_1153583 3300033541 Bacteria 633
197 Ga0316596_1165536 3300033541 Bacteria 610
198 Ga0316596_1181698 3300033541 Bacteria 582
199 Ga0316596_1184360 3300033541 Bacteria 578
200 Ga0316596_1194678 3300033541 Bacteria 563
201 Ga0316596_1195748 3300033541 Bacteria 562
202 Ga0316596_1196517 3300033541 Unclassified 561
203 Ga0316596_1208326 3300033541 Bacteria 545
204 Ga0316574_0000068 3300035398 Bacteria 27980
205 Ga0316574_0017349 3300035398 Bacteria 4213
206 Ga0316574_0193713 3300035398 Bacteria 1307
207 Ga0316574_0348274 3300035398 Bacteria 937
208 Ga0316574_0567015 3300035398 Bacteria 703
209 Ga0316582_0002065 3300036647 Bacteria 9259
210 Ga0316582_0009299 3300036647 Bacteria 5327
211 Ga0316582_0126688 3300036647 Bacteria 1712
212 Ga0316584_0000874 3300036712 Bacteria 17108
213 Ga0316584_0004805 3300036712 Bacteria 8973
214 Ga0316584_0005422 3300036712 Bacteria 8560
215 Ga0316584_0017262 3300036712 Bacteria 5185
216 Ga0316584_0046315 3300036712 Bacteria 3248
217 Ga0316584_0073864 3300036712 Bacteria 2556
218 Ga0316584_0079884 3300036712 Bacteria 2450
219 Ga0316584_0151142 3300036712 Bacteria 1728
220 Ga0395905_0902377 3300037471 Bacteria 787
221 Ga0316581_0097690 3300037588 Bacteria 904
222 Ga0316581_0274672 3300037588 Bacteria 518
223 Ga0451803_01715 3300041457 Bacteria 608
224 Ga0439437_019634 3300042000 Bacteria 812
225 Ga0439435_0015858 3300042436 Bacteria 1881
226 Ga0439459_0011542 3300042438 Bacteria 1558
227 Ga0495590_0000903 3300046457 Bacteria 13283
228 Ga0495638_0034114 3300046460 Bacteria 3250
229 Ga0495638_0108709 3300046460 Bacteria 1649
230 Ga0495606_0092118 3300046507 Bacteria 1862
231 Ga0495606_0121703 3300046507 Unclassified 1561
232 Ga0495610_0009493 3300046512 Bacteria 6145
233 Ga0495610_0233052 3300046512 Bacteria 738
234 Ga0495616_0000008 3300046513 Bacteria 226291
235 Ga0495632_0016483 3300046519 Bacteria 4108
236 Ga0495632_0026255 3300046519 Bacteria 3068
237 Ga0495637_0038477 3300046520 Bacteria 2071
238 Ga0495668_0000067 3300046616 Bacteria 176418
239 Ga0495668_0022180 3300046616 Bacteria 3631
240 Ga0495668_0300304 3300046616 Bacteria 880
241 Ga0495625_0000011 3300046660 Bacteria 377120
242 Ga0495660_0001489 3300046810 Bacteria 15861
243 Ga0495683_0177977 3300047323 Bacteria 973
244 Ga0495679_068182 3300047446 Bacteria 1030
245 Ga0495673_0000115 3300047469 Bacteria 154414
246 Ga0495673_0000160 3300047469 Bacteria 115718
247 Ga0495686_0000660 3300047472 Bacteria 46840
248 Ga0495686_0025192 3300047472 Bacteria 3901
249 Ga0496106_0022613 3300048909 Bacteria 4673
250 Ga0496107_0000036 3300048910 Bacteria 79369
251 Ga0496115_0304688 3300048918 Bacteria 1305
252 Ga0496121_0000833 3300048924 Bacteria 56021
253 Ga0496126_0368403 3300048929 Bacteria 1172
254 Ga0496126_0620141 3300048929 Unclassified 850
255 Ga0501310_060011 3300049130 Bacteria 565
256 Ga0501341_12555 3300049131 Bacteria 575
257 Ga0501311_038623 3300049527 Bacteria 717
258 Ga0501317_071518 3300049533 Bacteria 586
259 Ga0501325_053708 3300049541 Bacteria 518
260 Ga0501047_0013882 3300049581 Bacteria 7650
261 Ga0501044_0066380 3300049823 Bacteria 3679
262 Ga0501044_0341735 3300049823 Bacteria 1418
263 nmdc:mga0k408_54617_c1 3300050493 Bacteria 2315
264 nmdc:mga07m45_178204_c1 3300050496 Bacteria 1236
265 Ga0500554_000752 3300053102 Bacteria 6519
266 Ga0500556_0000320 3300053104 Bacteria 36107
267 Ga0500562_003952 3300053108 Bacteria 3740
268 Ga0500595_020688 3300053119 Bacteria 2362
269 Ga0500622_0053883 3300053156 Bacteria 2064
270 Ga0500609_013753 3300053731 Bacteria 1095
271 Ga0587090_044496 3300059510 Bacteria 793
272 Ga0587098_023260 3300059604 Bacteria 804
273 2587919312 2585428106 Bacteria 5179711
274 2643779565 2643221552 Bacteria 5708754
275 2643931118 2643221584 Bacteria 5511711
276 2644225138 2643221640 Bacteria 5258820
277 2644232446 2643221642 Bacteria 5357871
278 2792459751 2791355048 Bacteria 5832535
279 2792459784 2791355048 Bacteria 5832535
280 2819535526 2818991435 Bacteria 5433759
281 2819644769 2818991454 Bacteria 5563326
282 2843747412 2843744320 Bacteria 5659202
283 2843747445 2843744320 Bacteria 5659202
284 Ga0316593_10044285
285 JGI25157J39369_1012925
286 rootL2_10027791
287 rootL2_10027792
288 rootH1_10360196
289 Ga0055526_1011670
290 Ga0055526_1032529
291 Ga0055526_1060263
292 Ga0055524_1028301
293 Ga0055531_10002888
294 Ga0065165_1002050
295 Ga0070658_10149834
296 Ga0070671_100338682
297 Ga0070667_100280929
298 Ga0068853_100575527
299 Ga0070665_100000752
300 Ga0070665_100112059
301 Ga0070665_100392060
302 Ga0068859_100569800
303 Ga0075365_10297592
304 Ga0075363_100458674
305 Ga0075366_10037520
306 Ga0097620_100569845
307 Ga0105240_10028404
308 Ga0105240_10345285
309 Ga0105241_10551075
310 Ga0105238_10001217
311 Ga0157380_10479635
312 Ga0163161_11428389
313 Ga0209026_1000929
314 Ga0209564_1002688
315 Ga0209564_1031456
316 Ga0209256_1000535
317 Ga0209256_1026161
318 Ga0209257_1000074
319 Ga0209257_1000242
320 Ga0207695_10018339
321 Ga0207695_10287504
322 Ga0207694_10001272
323 Ga0207644_10551647
324 Ga0207661_11366775
325 Ga0207640_11161755
326 Ga0207703_11320178
327 Ga0207639_11191914
328 Ga0268266_10000744
329 Ga0268266_10948386
330 Ga0307515_10017956
331 Ga0307515_10020184
332 Ga0311001_1068785
333 Ga0316575_10008261
334 Ga0316575_10150225
335 Ga0316579_10004346
336 Ga0316579_10007476
337 Ga0316579_10015890
338 Ga0316579_10025135
339 Ga0316579_10089452
340 Ga0316576_10010204
341 Ga0316576_10011831
342 Ga0316576_10031512
343 Ga0316576_10056884
344 Ga0316576_10116959
345 Ga0316576_10137830
346 Ga0316576_10272819
347 Ga0316576_10428377
348 Ga0316578_10001515
349 Ga0316578_10002374
350 Ga0316578_10006017
351 Ga0316578_10019744
352 Ga0316578_10020863
353 Ga0316578_10036455
354 Ga0316578_10120146
355 Ga0316577_10000040
356 Ga0316577_10021314
357 Ga0316577_10022056
358 Ga0316577_10052746
359 Ga0316583_10005101
360 Ga0316583_10043947
361 Ga0316585_10000744
362 Ga0316585_10038306
363 Ga0316585_10059234
364 Ga0316580_10000263
365 Ga0316580_10005031
366 Ga0316580_10005928
367 Ga0316580_10082900
368 Ga0316580_10114132
369 Ga0316580_10174045
370 Ga0316593_10000268
371 Ga0316593_10011410
372 Ga0316593_10014845
373 Ga0316593_10017350
374 Ga0316593_10021018
375 Ga0316593_10034805
376 Ga0316593_10038841
377 Ga0316593_10054100
378 Ga0316593_10056334
379 Ga0316593_10080552
380 Ga0316593_10129786
381 Ga0316593_10143525
382 Ga0316593_10164140
383 Ga0316593_10177735
384 Ga0316593_10187617
385 Ga0316593_10263768
386 Ga0316593_10342129
387 Ga0316593_10342609
388 Ga0316593_10353733
389 Ga0316592_1003642
390 Ga0316592_1003708
391 Ga0316592_1010148
392 Ga0316592_1011407
393 Ga0316592_1013029
394 Ga0316592_1031630
395 Ga0316592_1037134
396 Ga0316592_1057398
397 Ga0316592_1062393
398 Ga0316592_1066010
399 Ga0316592_1073700
400 Ga0316592_1076286
401 Ga0316592_1076570
402 Ga0316592_1093575
403 Ga0316592_1105334
404 Ga0316592_1105807
405 Ga0316592_1127919
406 Ga0316592_1128746
407 Ga0316592_1131845
408 Ga0316592_1133529
409 Ga0316592_1145294
410 Ga0316592_1146506
411 Ga0316586_1005241
412 Ga0316586_1005322
413 Ga0316586_1009512
414 Ga0316586_1011494
415 Ga0316586_1064767
416 Ga0316586_1065011
417 Ga0316586_1068287
418 Ga0316586_1078225
419 Ga0316586_1085376
420 Ga0316586_1088607
421 Ga0316586_1088703
422 Ga0316586_1092266
423 Ga0316586_1097991
424 Ga0316586_1099731
425 Ga0316588_1000223
426 Ga0316588_1000392
427 Ga0316588_1004586
428 Ga0316588_1021144
429 Ga0316588_1021172
430 Ga0316588_1037890
431 Ga0316588_1055920
432 Ga0316588_1092021
433 Ga0316588_1101888
434 Ga0316588_1102683
435 Ga0316588_1119584
436 Ga0316588_1121166
437 Ga0316588_1133461
438 Ga0316588_1141519
439 Ga0316588_1157809
440 Ga0316588_1160346
441 Ga0316588_1162364
442 Ga0316588_1171961
443 Ga0316588_1172298
444 Ga0316588_1179493
445 Ga0316588_1192349
446 Ga0316588_1213948
447 Ga0316587_1004297
448 Ga0316587_1014839
449 Ga0316587_1038060
450 Ga0316587_1049178
451 Ga0316587_1055492
452 Ga0316587_1058850
453 Ga0316587_1075409
454 Ga0316587_1079157
455 Ga0316587_1094350
456 Ga0316587_1099528
457 Ga0316587_1099723
458 Ga0316587_1100309
459 Ga0316587_1110393
460 Ga0316596_1000416
461 Ga0316596_1001697
462 Ga0316596_1005124
463 Ga0316596_1016473
464 Ga0316596_1019364
465 Ga0316596_1019381
466 Ga0316596_1021829
467 Ga0316596_1024730
468 Ga0316596_1070097
469 Ga0316596_1082417
470 Ga0316596_1086159
471 Ga0316596_1105730
472 Ga0316596_1122743
473 Ga0316596_1126951
474 Ga0316596_1130595
475 Ga0316596_1138106
476 Ga0316596_1144911
477 Ga0316596_1147509
478 Ga0316596_1147804
479 Ga0316596_1153583
480 Ga0316596_1165536
481 Ga0316596_1181698
482 Ga0316596_1184360
483 Ga0316596_1194678
484 Ga0316596_1195748
485 Ga0316596_1196517
486 Ga0316596_1208326
487 Ga0316574_0000068
488 Ga0316574_0017349
489 Ga0316574_0193713
490 Ga0316574_0348274
491 Ga0316574_0567015
492 Ga0316582_0002065
493 Ga0316582_0009299
494 Ga0316582_0126688
495 Ga0316584_0000874
496 Ga0316584_0004805
497 Ga0316584_0005422
498 Ga0316584_0017262
499 Ga0316584_0046315
500 Ga0316584_0073864
501 Ga0316584_0079884
502 Ga0316584_0151142
503 Ga0395905_0902377
504 Ga0316581_0097690
505 Ga0316581_0274672
506 Ga0451803_01715
507 Ga0439437_019634
508 Ga0439435_0015858
509 Ga0439459_0011542
510 Ga0495590_0000903
511 Ga0495638_0034114
512 Ga0495638_0108709
513 Ga0495606_0092118
514 Ga0495606_0121703
515 Ga0495610_0009493
516 Ga0495610_0233052
517 Ga0495616_0000008
518 Ga0495632_0016483
519 Ga0495632_0026255
520 Ga0495637_0038477
521 Ga0495668_0000067
522 Ga0495668_0022180
523 Ga0495668_0300304
524 Ga0495625_0000011
525 Ga0495660_0001489
526 Ga0495683_0177977
527 Ga0495679_068182
528 Ga0495673_0000115
529 Ga0495673_0000160
530 Ga0495686_0000660
531 Ga0495686_0025192
532 Ga0496106_0022613
533 Ga0496107_0000036
534 Ga0496115_0304688
535 Ga0496121_0000833
536 Ga0496126_0368403
537 Ga0496126_0620141
538 Ga0501310_060011
539 Ga0501341_12555
540 Ga0501311_038623
541 Ga0501317_071518
542 Ga0501325_053708
543 Ga0501047_0013882
544 Ga0501044_0066380
545 Ga0501044_0341735
546 nmdc:mga0k408_54617_c1
547 nmdc:mga07m45_178204_c1
548 Ga0500554_000752
549 Ga0500556_0000320
550 Ga0500562_003952
551 Ga0500595_020688
552 Ga0500622_0053883
553 Ga0500609_013753
554 Ga0587090_044496
555 Ga0587098_023260
556 2587919312
557 2643779565
558 2643931118
559 2644225138
560 2644232446
561 2792459751
562 2792459784
563 2819535526
564 2819644769
565 2843747412
566 2843747445

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00011

HSP20

Hsp20/alpha crystallin family

39

138

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zjd-assembly1.cif.gz_A small heat shock protein agsa from salmonella typhimurium: truncations at n- and c- termini 0.8504 35 124
7ck4-assembly1.cif.gz_B structural and functional analysis of small heat shock protein from synechococcus phage s-shm2 0.8352 36 128
7ck4-assembly1.cif.gz_F structural and functional analysis of small heat shock protein from synechococcus phage s-shm2 0.8328 37 128
4zjd-assembly1.cif.gz_A small heat shock protein agsa from salmonella typhimurium: truncations at n- and c- termini 0.8186 35 124
6cn0-assembly4.cif.gz_D 2.95 angstrom crystal structure of 16s rrna methylase from proteus mirabilis 0.8169 105 126
ID Description Score Start End Superfamily
af_P0C054_33_137_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.923 35 139 2.60.40.790
af_P0C054_33_137_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.9148 35 139 2.60.40.790
4zj9A00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.9052 35 124 2.60.40.790
4zj9A00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8694 35 124 2.60.40.790
af_P0C058_31_135_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8672 35 138 2.60.40.790
ID Description Score Start End GO Terms
AF-A0A4S0IBR2-F1-model_v4 deleted 0.9108 32 123
AF-A0A326KJW1-F1-model_v4 deleted 0.8927 33 140
AF-A0A0S7ZVF0-F1-model_v4 SHSP domain-containing protein 0.8755 46 142
AF-A0A3S2A945-F1-model_v4 Hsp20 family protein 0.8753 49 144
AF-A0A6S4VGF5-F1-model_v4 deleted 0.8744 30 144

Map