F385433

General Info

Members Datasets Scaffolds Average Seq Length
283 168 566 272

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100013544|Ga0070699_1000135444
Length 291
Sequence MTTRHLPHGTSGAVDATPTMTAEQAYAEVERLTRRRARNFSYGIMVLPREKRRAIAAIYAFARRVDDVADGELAVDEKRVQLEQLREVLSSPGGDAMAVALADARSRFPIPDRALHTLVDGGLQDLDQSRYANFDELRGYCTKVAGAVGVACVAVYGSDDVERAETLGIALQLINIIRDVREDWELGRVYLPQDELGSFGVTEDDIAAGRATDAWRALLTFQAERARVHLQDGLGLLRSLDGRSALCVSTFAGLYRATLQRIEARGFDVFDGPPHLSALTKLRIVGEGLWR

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
73 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
107 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
111 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
112 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
113 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
114 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
123 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
126 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
127 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
128 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
129 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
130 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
133 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
136 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
139 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
140 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
141 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
145 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
167 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
168 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.35
Nodule 0
Rhizoplane 11.66
Rhizosphere 87.63
Stem 0
Stem Tuber 0
Unclassified 12.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100013544 3300005518 Bacteria 7021
2 Ga0070682_100003231 3300005337 Bacteria 9038
3 Ga0070682_100004496 3300005337 Bacteria 7744
4 Ga0070660_100183320 3300005339 Unclassified 1695
5 Ga0070691_10054123 3300005341 Bacteria 1921
6 Ga0070691_10080894 3300005341 Bacteria 1590
7 Ga0070668_100005149 3300005347 Bacteria 9697
8 Ga0070675_100130484 3300005354 Bacteria 2141
9 Ga0070673_100203504 3300005364 Unclassified 1706
10 Ga0070688_100002749 3300005365 Bacteria 8937
11 Ga0070659_100041452 3300005366 Bacteria 3598
12 Ga0070709_10017133 3300005434 Bacteria 4148
13 Ga0070714_100014950 3300005435 Bacteria 6239
14 Ga0070713_100519920 3300005436 Bacteria 1124
15 Ga0070710_10010305 3300005437 Bacteria 4590
16 Ga0070711_100017075 3300005439 Bacteria 4616
17 Ga0070705_100023255 3300005440 Unclassified 3325
18 Ga0070700_100031529 3300005441 Bacteria 3177
19 Ga0070708_100160835 3300005445 Unclassified 2093
20 Ga0070663_100029827 3300005455 Bacteria 3732
21 Ga0070662_100144527 3300005457 Bacteria 1846
22 Ga0068867_100004137 3300005459 Bacteria 10191
23 Ga0070685_10020673 3300005466 Bacteria 3564
24 Ga0070707_100000613 3300005468 Bacteria 35814
25 Ga0070698_100022856 3300005471 Bacteria 6538
26 Ga0070698_100053037 3300005471 Bacteria 4122
27 Ga0070699_100022364 3300005518 Bacteria 5449
28 Ga0070699_100574293 3300005518 Unclassified 1027
29 Ga0070679_100163639 3300005530 Bacteria 2199
30 Ga0070697_100417544 3300005536 Bacteria 1166
31 Ga0068853_100088225 3300005539 Bacteria 2723
32 Ga0070672_100331472 3300005543 Bacteria 1295
33 Ga0070695_100000072 3300005545 Bacteria 40551
34 Ga0070695_100332632 3300005545 Bacteria 1133
35 Ga0070696_100012146 3300005546 Bacteria 5771
36 Ga0070696_100035494 3300005546 Unclassified 3434
37 Ga0070665_100150449 3300005548 Bacteria 2330
38 Ga0070704_100034699 3300005549 Bacteria 3424
39 Ga0070704_100424999 3300005549 Bacteria 1139
40 Ga0068855_100126812 3300005563 Bacteria 2918
41 Ga0068855_100415823 3300005563 Bacteria 1471
42 Ga0068855_100546838 3300005563 Bacteria 1254
43 Ga0068856_100073332 3300005614 Bacteria 3389
44 Ga0068856_100100624 3300005614 Bacteria 2883
45 Ga0068856_100149004 3300005614 Bacteria 2348
46 Ga0068856_100198648 3300005614 Unclassified 2020
47 Ga0068856_100362611 3300005614 Bacteria 1468
48 Ga0070702_100019370 3300005615 Bacteria 3548
49 Ga0068852_100132411 3300005616 Bacteria 2298
50 Ga0068852_100324999 3300005616 Bacteria 1495
51 Ga0068859_100044948 3300005617 Bacteria 4438
52 Ga0068866_10003922 3300005718 Bacteria 6107
53 Ga0068860_100078223 3300005843 Bacteria 3146
54 Ga0068862_100349153 3300005844 Bacteria 1372
55 Ga0081539_10047779 3300005985 Bacteria 2440
56 Ga0070717_10071925 3300006028 Bacteria 2886
57 Ga0070717_10232210 3300006028 Bacteria 1624
58 Ga0070715_10005853 3300006163 Bacteria 4137
59 Ga0070712_100001869 3300006175 Bacteria 12850
60 Ga0075428_100033180 3300006844 Bacteria 5701
61 Ga0075431_100036707 3300006847 Bacteria 5048
62 Ga0075433_10024282 3300006852 Bacteria 5114
63 Ga0075434_100026908 3300006871 Bacteria 5642
64 Ga0075434_100051610 3300006871 Bacteria 4087
65 Ga0075434_100072102 3300006871 Bacteria 3446
66 Ga0075434_100148703 3300006871 Unclassified 2362
67 Ga0075434_100789291 3300006871 Unclassified 966
68 Ga0068865_100157009 3300006881 Bacteria 1731
69 Ga0068865_100504764 3300006881 Bacteria 1009
70 Ga0075436_100002949 3300006914 Bacteria 11664
71 Ga0075436_100012527 3300006914 Bacteria 5811
72 Ga0075436_100016350 3300006914 Bacteria 5078
73 Ga0097620_100044948 3300006931 Bacteria 4438
74 Ga0075435_100001312 3300007076 Bacteria 15970
75 Ga0075435_100003674 3300007076 Bacteria 10450
76 Ga0075435_100014587 3300007076 Bacteria 5880
77 Ga0111539_10000950 3300009094 Bacteria 37974
78 Ga0105245_10134805 3300009098 Bacteria 2320
79 Ga0105245_10234508 3300009098 Unclassified 1776
80 Ga0105247_10302367 3300009101 Bacteria 1110
81 Ga0114129_10004336 3300009147 Bacteria 20059
82 Ga0114129_10061702 3300009147 Bacteria 5239
83 Ga0114129_10074134 3300009147 Bacteria 4741
84 Ga0114129_10084698 3300009147 Unclassified 4401
85 Ga0114129_10715647 3300009147 Bacteria 1285
86 Ga0105241_10007286 3300009174 Bacteria 8141
87 Ga0105242_10307977 3300009176 Bacteria 1448
88 Ga0105248_10406990 3300009177 Bacteria 1532
89 Ga0105237_10004066 3300009545 Bacteria 17058
90 Ga0105237_10074619 3300009545 Bacteria 3384
91 Ga0105249_10005553 3300009553 Bacteria 10901
92 Ga0105249_10008082 3300009553 Bacteria 9170
93 Ga0105239_10062990 3300010375 Bacteria 4071
94 Ga0105239_10194065 3300010375 Bacteria 2273
95 Ga0105246_10065081 3300011119 Bacteria 2549
96 Ga0157370_10008641 3300013104 Bacteria 10960
97 Ga0157369_10006655 3300013105 Bacteria 13355
98 Ga0157369_10387586 3300013105 Bacteria 1450
99 Ga0157374_10052314 3300013296 Bacteria 3803
100 Ga0157378_10773616 3300013297 Bacteria 984
101 Ga0163162_10197389 3300013306 Bacteria 2141
102 Ga0157372_10002472 3300013307 Bacteria 20032
103 Ga0157372_10429362 3300013307 Bacteria 1540
104 Ga0157377_10009772 3300014745 Bacteria 4723
105 Ga0157379_10500158 3300014968 Unclassified 1127
106 Ga0157376_10006365 3300014969 Bacteria 8339
107 Ga0182006_1008596 3300015261 Bacteria 4627
108 Ga0207692_10034627 3300025898 Bacteria 2446
109 Ga0207642_10134847 3300025899 Bacteria 1294
110 Ga0207680_10170897 3300025903 Unclassified 1464
111 Ga0207685_10025550 3300025905 Bacteria 2041
112 Ga0207684_10028860 3300025910 Bacteria 4726
113 Ga0207707_10100941 3300025912 Bacteria 2522
114 Ga0207693_10001278 3300025915 Bacteria 22410
115 Ga0207693_10006381 3300025915 Bacteria 9772
116 Ga0207693_10025580 3300025915 Bacteria 4679
117 Ga0207693_10026020 3300025915 Bacteria 4634
118 Ga0207693_10057609 3300025915 Bacteria 3045
119 Ga0207663_10005128 3300025916 Bacteria 6586
120 Ga0207663_10086818 3300025916 Bacteria 2064
121 Ga0207663_10368540 3300025916 Bacteria 1091
122 Ga0207660_10398998 3300025917 Bacteria 1107
123 Ga0207657_10155815 3300025919 Unclassified 1857
124 Ga0207652_10049697 3300025921 Bacteria 3591
125 Ga0207652_10354852 3300025921 Bacteria 1323
126 Ga0207646_10015448 3300025922 Bacteria 7210
127 Ga0207646_10126329 3300025922 Unclassified 2300
128 Ga0207659_10085339 3300025926 Bacteria 2346
129 Ga0207687_10027004 3300025927 Bacteria 3848
130 Ga0207700_10396933 3300025928 Bacteria 1208
131 Ga0207664_10010078 3300025929 Bacteria 6661
132 Ga0207664_10060666 3300025929 Bacteria 3015
133 Ga0207664_10063510 3300025929 Bacteria 2951
134 Ga0207664_10065788 3300025929 Bacteria 2903
135 Ga0207706_10015029 3300025933 Bacteria 7008
136 Ga0207709_10153513 3300025935 Bacteria 1598
137 Ga0207665_10000758 3300025939 Bacteria 21728
138 Ga0207691_10029636 3300025940 Bacteria 5119
139 Ga0207691_10211146 3300025940 Bacteria 1686
140 Ga0207679_10562176 3300025945 Unclassified 1024
141 Ga0207667_10038788 3300025949 Bacteria 5081
142 Ga0207651_10170088 3300025960 Unclassified 1718
143 Ga0207712_10040741 3300025961 Bacteria 3190
144 Ga0207712_10053255 3300025961 Bacteria 2838
145 Ga0207668_10077466 3300025972 Bacteria 2397
146 Ga0207640_10221573 3300025981 Bacteria 1449
147 Ga0207678_10010548 3300026067 Bacteria 8115
148 Ga0207678_10369508 3300026067 Bacteria 1239
149 Ga0207708_10012455 3300026075 Bacteria 6340
150 Ga0207702_10441575 3300026078 Bacteria 1261
151 Ga0207648_10000454 3300026089 Bacteria 45454
152 Ga0207675_100001283 3300026118 Bacteria 25142
153 Ga0207683_10007373 3300026121 Bacteria 9430
154 Ga0207683_10192773 3300026121 Bacteria 1850
155 Ga0268266_10362086 3300028379 Bacteria 1365
156 Ga0265313_10012851 3300031595 Bacteria 5080
157 Ga0307410_10305821 3300031852 Bacteria 1256
158 Ga0307409_100123440 3300031995 Bacteria 2198
159 Ga0307416_100459100 3300032002 Bacteria 1328
160 Ga0373951_0037335 3300035091 Bacteria 1162
161 Ga0373939_0007812 3300035114 Bacteria 2606
162 Ga0373941_0073871 3300035115 Bacteria 1138
163 Ga0373961_0043131 3300035241 Bacteria 1311
164 Ga0373962_0042772 3300035242 Bacteria 1282
165 Ga0395899_0004642 3300037312 Bacteria 10713
166 Ga0395899_0009616 3300037312 Bacteria 7420
167 Ga0395899_0012433 3300037312 Bacteria 6522
168 Ga0395899_0052857 3300037312 Bacteria 3010
169 Ga0395899_0124436 3300037312 Bacteria 1844
170 Ga0395899_0132449 3300037312 Unclassified 1779
171 Ga0395900_0010938 3300037418 Bacteria 9280
172 Ga0395900_0011192 3300037418 Bacteria 9176
173 Ga0395900_0017040 3300037418 Bacteria 7417
174 Ga0395900_0036949 3300037418 Bacteria 5035
175 Ga0395900_0058458 3300037418 Bacteria 3969
176 Ga0395900_0179331 3300037418 Unclassified 2153
177 Ga0395900_0659387 3300037418 Bacteria 982
178 Ga0395898_0006126 3300037466 Bacteria 12896
179 Ga0395898_0008632 3300037466 Bacteria 10750
180 Ga0395898_0011727 3300037466 Bacteria 9087
181 Ga0395898_0040527 3300037466 Bacteria 4605
182 Ga0395898_0060299 3300037466 Bacteria 3687
183 Ga0395898_0065104 3300037466 Bacteria 3534
184 Ga0395898_0069041 3300037466 Unclassified 3420
185 Ga0395898_0142618 3300037466 Bacteria 2294
186 Ga0395898_0581541 3300037466 Bacteria 1062
187 Ga0395905_0002597 3300037471 Bacteria 19875
188 Ga0395905_0003544 3300037471 Bacteria 16638
189 Ga0395905_0008578 3300037471 Bacteria 10072
190 Ga0395905_0017137 3300037471 Bacteria 6880
191 Ga0395905_0039940 3300037471 Bacteria 4402
192 Ga0395905_0055630 3300037471 Bacteria 3703
193 Ga0395905_0101456 3300037471 Bacteria 2701
194 Ga0395901_0000370 3300038443 Bacteria 54012
195 Ga0395901_0004046 3300038443 Bacteria 14768
196 Ga0395901_0006602 3300038443 Bacteria 11722
197 Ga0395901_0007493 3300038443 Bacteria 11024
198 Ga0395901_0055462 3300038443 Bacteria 4121
199 Ga0395901_0099678 3300038443 Bacteria 3046
200 Ga0395901_0188388 3300038443 Unclassified 2164
201 Ga0395901_0223049 3300038443 Bacteria 1970
202 Ga0395901_0667706 3300038443 Bacteria 1041
203 Ga0451853_2877493 3300041512 Bacteria 1091
204 Ga0466972_0053382 3300044658 Bacteria 1946
205 Ga0466964_0044401 3300044706 Bacteria 1805
206 Ga0466960_0239466 3300044901 Bacteria 1004
207 Ga0466959_0006900 3300045049 Bacteria 7927
208 Ga0466959_0122004 3300045049 Bacteria 1852
209 Ga0466958_0301211 3300045836 Bacteria 1029
210 Ga0495603_0075018 3300046455 Bacteria 1986
211 Ga0495590_0133501 3300046457 Bacteria 894
212 Ga0495582_0031785 3300046473 Bacteria 2902
213 Ga0495639_0014988 3300046475 Bacteria 3360
214 Ga0495584_0070484 3300046491 Bacteria 1757
215 Ga0495630_0048396 3300046517 Bacteria 3181
216 Ga0495631_0119980 3300046518 Bacteria 1131
217 Ga0495631_0173276 3300046518 Unclassified 925
218 Ga0495642_0028314 3300046528 Bacteria 2232
219 Ga0495665_0111155 3300046531 Bacteria 1437
220 Ga0495659_0056043 3300046664 Bacteria 1446
221 Ga0495647_0028765 3300046681 Unclassified 2051
222 Ga0495613_0289621 3300046689 Bacteria 1135
223 Ga0495624_0166958 3300046690 Bacteria 1343
224 Ga0495589_0044285 3300046794 Bacteria 2214
225 Ga0495589_0071169 3300046794 Bacteria 1700
226 Ga0495581_0001811 3300047315 Bacteria 11953
227 Ga0495581_0043673 3300047315 Bacteria 2592
228 Ga0495676_0184406 3300047321 Bacteria 1460
229 Ga0496101_0027415 3300048904 Bacteria 3968
230 Ga0496101_0309418 3300048904 Bacteria 1238
231 Ga0496102_0031879 3300048905 Bacteria 4731
232 Ga0496102_0057784 3300048905 Bacteria 3543
233 Ga0496102_0172106 3300048905 Bacteria 2038
234 Ga0496102_0462892 3300048905 Bacteria 1189
235 Ga0496103_0047100 3300048906 Bacteria 2663
236 Ga0496103_0073660 3300048906 Unclassified 2139
237 Ga0496103_0163226 3300048906 Bacteria 1429
238 Ga0496103_0176407 3300048906 Unclassified 1373
239 Ga0496104_0004793 3300048907 Bacteria 11782
240 Ga0496104_0039916 3300048907 Bacteria 4397
241 Ga0496104_0496484 3300048907 Bacteria 1131
242 Ga0496106_0244580 3300048909 Bacteria 1434
243 Ga0496107_0111627 3300048910 Unclassified 2009
244 Ga0496108_0010271 3300048911 Bacteria 7600
245 Ga0496108_0161150 3300048911 Unclassified 1939
246 Ga0496109_0010786 3300048912 Bacteria 7823
247 Ga0496109_0152926 3300048912 Bacteria 2161
248 Ga0496109_0316971 3300048912 Unclassified 1471
249 Ga0496110_0000958 3300048913 Bacteria 20207
250 Ga0496110_0549252 3300048913 Bacteria 1050
251 Ga0496111_0000684 3300048914 Bacteria 17856
252 Ga0496111_0093658 3300048914 Bacteria 2202
253 Ga0496111_0254192 3300048914 Bacteria 1304
254 Ga0496112_0002443 3300048915 Bacteria 14979
255 Ga0496112_0108151 3300048915 Bacteria 2751
256 Ga0496112_0207183 3300048915 Unclassified 1918
257 Ga0496112_0366109 3300048915 Unclassified 1383
258 Ga0496113_0306111 3300048916 Bacteria 1273
259 Ga0496114_0054146 3300048917 Bacteria 3346
260 Ga0496114_0449962 3300048917 Bacteria 1140
261 Ga0496115_0186826 3300048918 Bacteria 1712
262 Ga0501040_0021395 3300049576 Bacteria 4320
263 Ga0501075_0162102 3300049591 Bacteria 1706
264 nmdc:mga0yw44_166873_c1 3300050492 Bacteria 1444
265 nmdc:mga05p37_10036_c1 3300050507 Bacteria 11238
266 nmdc:mga05p37_301526_c1 3300050507 Unclassified 1903
267 nmdc:mga05p37_35671_c1 3300050507 Bacteria 4517
268 nmdc:mga05p37_570218_c1 3300050507 Bacteria 1284
269 nmdc:mga05p37_58570_c1 3300050507 Bacteria 4744
270 nmdc:mga06r32_31409_c1 3300050510 Bacteria 4988
271 nmdc:mga08y16_9044_c1 3300050511 Bacteria 10456
272 nmdc:mga0n895_101532_c1 3300050512 Bacteria 2886
273 nmdc:mga0n895_31768_c1 3300050512 Bacteria 5059
274 nmdc:mga0n895_49208_c1 3300050512 Bacteria 4128
275 nmdc:mga0n895_672841_c1 3300050512 Unclassified 1032
276 nmdc:mga0rr50_179398_c1 3300050513 Bacteria 1730
277 nmdc:mga0rr50_41409_c1 3300050513 Bacteria 3357
278 nmdc:mga0rr50_57979_c1 3300050513 Unclassified 2900
279 nmdc:mga08x19_40679_c1 3300050514 Unclassified 2959
280 nmdc:mga0a205_7054_c1 3300050515 Bacteria 10150
281 Ga0501082_0316937 3300060353 Bacteria 1359
282 Ga0466962_0013953 3300061719 Bacteria 3870
283 Ga0530510_0200400 3300061734 Bacteria 1482
284 Ga0070699_100013544
285 Ga0070682_100003231
286 Ga0070682_100004496
287 Ga0070660_100183320
288 Ga0070691_10054123
289 Ga0070691_10080894
290 Ga0070668_100005149
291 Ga0070675_100130484
292 Ga0070673_100203504
293 Ga0070688_100002749
294 Ga0070659_100041452
295 Ga0070709_10017133
296 Ga0070714_100014950
297 Ga0070713_100519920
298 Ga0070710_10010305
299 Ga0070711_100017075
300 Ga0070705_100023255
301 Ga0070700_100031529
302 Ga0070708_100160835
303 Ga0070663_100029827
304 Ga0070662_100144527
305 Ga0068867_100004137
306 Ga0070685_10020673
307 Ga0070707_100000613
308 Ga0070698_100022856
309 Ga0070698_100053037
310 Ga0070699_100022364
311 Ga0070699_100574293
312 Ga0070679_100163639
313 Ga0070697_100417544
314 Ga0068853_100088225
315 Ga0070672_100331472
316 Ga0070695_100000072
317 Ga0070695_100332632
318 Ga0070696_100012146
319 Ga0070696_100035494
320 Ga0070665_100150449
321 Ga0070704_100034699
322 Ga0070704_100424999
323 Ga0068855_100126812
324 Ga0068855_100415823
325 Ga0068855_100546838
326 Ga0068856_100073332
327 Ga0068856_100100624
328 Ga0068856_100149004
329 Ga0068856_100198648
330 Ga0068856_100362611
331 Ga0070702_100019370
332 Ga0068852_100132411
333 Ga0068852_100324999
334 Ga0068859_100044948
335 Ga0068866_10003922
336 Ga0068860_100078223
337 Ga0068862_100349153
338 Ga0081539_10047779
339 Ga0070717_10071925
340 Ga0070717_10232210
341 Ga0070715_10005853
342 Ga0070712_100001869
343 Ga0075428_100033180
344 Ga0075431_100036707
345 Ga0075433_10024282
346 Ga0075434_100026908
347 Ga0075434_100051610
348 Ga0075434_100072102
349 Ga0075434_100148703
350 Ga0075434_100789291
351 Ga0068865_100157009
352 Ga0068865_100504764
353 Ga0075436_100002949
354 Ga0075436_100012527
355 Ga0075436_100016350
356 Ga0097620_100044948
357 Ga0075435_100001312
358 Ga0075435_100003674
359 Ga0075435_100014587
360 Ga0111539_10000950
361 Ga0105245_10134805
362 Ga0105245_10234508
363 Ga0105247_10302367
364 Ga0114129_10004336
365 Ga0114129_10061702
366 Ga0114129_10074134
367 Ga0114129_10084698
368 Ga0114129_10715647
369 Ga0105241_10007286
370 Ga0105242_10307977
371 Ga0105248_10406990
372 Ga0105237_10004066
373 Ga0105237_10074619
374 Ga0105249_10005553
375 Ga0105249_10008082
376 Ga0105239_10062990
377 Ga0105239_10194065
378 Ga0105246_10065081
379 Ga0157370_10008641
380 Ga0157369_10006655
381 Ga0157369_10387586
382 Ga0157374_10052314
383 Ga0157378_10773616
384 Ga0163162_10197389
385 Ga0157372_10002472
386 Ga0157372_10429362
387 Ga0157377_10009772
388 Ga0157379_10500158
389 Ga0157376_10006365
390 Ga0182006_1008596
391 Ga0207692_10034627
392 Ga0207642_10134847
393 Ga0207680_10170897
394 Ga0207685_10025550
395 Ga0207684_10028860
396 Ga0207707_10100941
397 Ga0207693_10001278
398 Ga0207693_10006381
399 Ga0207693_10025580
400 Ga0207693_10026020
401 Ga0207693_10057609
402 Ga0207663_10005128
403 Ga0207663_10086818
404 Ga0207663_10368540
405 Ga0207660_10398998
406 Ga0207657_10155815
407 Ga0207652_10049697
408 Ga0207652_10354852
409 Ga0207646_10015448
410 Ga0207646_10126329
411 Ga0207659_10085339
412 Ga0207687_10027004
413 Ga0207700_10396933
414 Ga0207664_10010078
415 Ga0207664_10060666
416 Ga0207664_10063510
417 Ga0207664_10065788
418 Ga0207706_10015029
419 Ga0207709_10153513
420 Ga0207665_10000758
421 Ga0207691_10029636
422 Ga0207691_10211146
423 Ga0207679_10562176
424 Ga0207667_10038788
425 Ga0207651_10170088
426 Ga0207712_10040741
427 Ga0207712_10053255
428 Ga0207668_10077466
429 Ga0207640_10221573
430 Ga0207678_10010548
431 Ga0207678_10369508
432 Ga0207708_10012455
433 Ga0207702_10441575
434 Ga0207648_10000454
435 Ga0207675_100001283
436 Ga0207683_10007373
437 Ga0207683_10192773
438 Ga0268266_10362086
439 Ga0265313_10012851
440 Ga0307410_10305821
441 Ga0307409_100123440
442 Ga0307416_100459100
443 Ga0373951_0037335
444 Ga0373939_0007812
445 Ga0373941_0073871
446 Ga0373961_0043131
447 Ga0373962_0042772
448 Ga0395899_0004642
449 Ga0395899_0009616
450 Ga0395899_0012433
451 Ga0395899_0052857
452 Ga0395899_0124436
453 Ga0395899_0132449
454 Ga0395900_0010938
455 Ga0395900_0011192
456 Ga0395900_0017040
457 Ga0395900_0036949
458 Ga0395900_0058458
459 Ga0395900_0179331
460 Ga0395900_0659387
461 Ga0395898_0006126
462 Ga0395898_0008632
463 Ga0395898_0011727
464 Ga0395898_0040527
465 Ga0395898_0060299
466 Ga0395898_0065104
467 Ga0395898_0069041
468 Ga0395898_0142618
469 Ga0395898_0581541
470 Ga0395905_0002597
471 Ga0395905_0003544
472 Ga0395905_0008578
473 Ga0395905_0017137
474 Ga0395905_0039940
475 Ga0395905_0055630
476 Ga0395905_0101456
477 Ga0395901_0000370
478 Ga0395901_0004046
479 Ga0395901_0006602
480 Ga0395901_0007493
481 Ga0395901_0055462
482 Ga0395901_0099678
483 Ga0395901_0188388
484 Ga0395901_0223049
485 Ga0395901_0667706
486 Ga0451853_2877493
487 Ga0466972_0053382
488 Ga0466964_0044401
489 Ga0466960_0239466
490 Ga0466959_0006900
491 Ga0466959_0122004
492 Ga0466958_0301211
493 Ga0495603_0075018
494 Ga0495590_0133501
495 Ga0495582_0031785
496 Ga0495639_0014988
497 Ga0495584_0070484
498 Ga0495630_0048396
499 Ga0495631_0119980
500 Ga0495631_0173276
501 Ga0495642_0028314
502 Ga0495665_0111155
503 Ga0495659_0056043
504 Ga0495647_0028765
505 Ga0495613_0289621
506 Ga0495624_0166958
507 Ga0495589_0044285
508 Ga0495589_0071169
509 Ga0495581_0001811
510 Ga0495581_0043673
511 Ga0495676_0184406
512 Ga0496101_0027415
513 Ga0496101_0309418
514 Ga0496102_0031879
515 Ga0496102_0057784
516 Ga0496102_0172106
517 Ga0496102_0462892
518 Ga0496103_0047100
519 Ga0496103_0073660
520 Ga0496103_0163226
521 Ga0496103_0176407
522 Ga0496104_0004793
523 Ga0496104_0039916
524 Ga0496104_0496484
525 Ga0496106_0244580
526 Ga0496107_0111627
527 Ga0496108_0010271
528 Ga0496108_0161150
529 Ga0496109_0010786
530 Ga0496109_0152926
531 Ga0496109_0316971
532 Ga0496110_0000958
533 Ga0496110_0549252
534 Ga0496111_0000684
535 Ga0496111_0093658
536 Ga0496111_0254192
537 Ga0496112_0002443
538 Ga0496112_0108151
539 Ga0496112_0207183
540 Ga0496112_0366109
541 Ga0496113_0306111
542 Ga0496114_0054146
543 Ga0496114_0449962
544 Ga0496115_0186826
545 Ga0501040_0021395
546 Ga0501075_0162102
547 nmdc:mga0yw44_166873_c1
548 nmdc:mga05p37_10036_c1
549 nmdc:mga05p37_301526_c1
550 nmdc:mga05p37_35671_c1
551 nmdc:mga05p37_570218_c1
552 nmdc:mga05p37_58570_c1
553 nmdc:mga06r32_31409_c1
554 nmdc:mga08y16_9044_c1
555 nmdc:mga0n895_101532_c1
556 nmdc:mga0n895_31768_c1
557 nmdc:mga0n895_49208_c1
558 nmdc:mga0n895_672841_c1
559 nmdc:mga0rr50_179398_c1
560 nmdc:mga0rr50_41409_c1
561 nmdc:mga0rr50_57979_c1
562 nmdc:mga08x19_40679_c1
563 nmdc:mga0a205_7054_c1
564 Ga0501082_0316937
565 Ga0466962_0013953
566 Ga0530510_0200400

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00494

SQS_PSY

Squalene/phytoene synthase

33

280

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5iys-assembly1.cif.gz_A crystal structure of a dehydrosqualene synthase in complex with ligand 0.9408 3 269
5iys-assembly1.cif.gz_A crystal structure of a dehydrosqualene synthase in complex with ligand 0.9207 3 269
4hd1-assembly1.cif.gz_A crystal structure of squalene synthase hpnc from alicyclobacillus acidocaldarius 0.9092 3 248
3vje-assembly2.cif.gz_B crystal structure of the y248a mutant of c(30) carotenoid dehydrosqualene synthase from staphylococcus aureus in complex with zaragozic acid a 0.8955 1 269
3ae0-assembly2.cif.gz_B crystal structure of the c(30) carotenoid dehydrosqualene synthase from staphylococcus aureus complexed with geranylgeranyl thiopyrophosphate 0.8924 1 269
ID Description Score Start End Superfamily
af_P9WHP3_1_280_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.9479 1 270 1.10.600.10
af_P9WHP3_1_280_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.9378 1 270 1.10.600.10
af_Q9VYS5_51_308_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8948 6 248 1.10.600.10
3we9A00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8902 3 267 1.10.600.10
3w7fA00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8897 1 269 1.10.600.10
ID Description Score Start End GO Terms
AF-A0A177R826-F1-model_v4 deleted 0.9983 1 243
AF-A0A177R826-F1-model_v4 deleted 0.9942 1 243
AF-A0A538M605-F1-model_v4 FAD-binding protein 0.9888 1 136 GO:0008299
GO:0016491
GO:0016765
AF-A0A7V9RAA6-F1-model_v4 Phytoene/squalene synthase family protein 0.9796 1 268 GO:0004311
GO:0016117
GO:0051996
AF-A0A6I1QEZ2-F1-model_v4 Presqualene diphosphate synthase HpnD (EC 2.5.1.103) 0.9741 1 271 GO:0004311
GO:0016117
GO:0016767
GO:0051996

Map