F385271

General Info

Members Datasets Scaffolds Average Seq Length
282 224 210 202

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842363717|2842369044
Length 229
Sequence HDHDHDHHDHAHGHDHDNHYSDMQARVKALETLLTEKGLIDPAAIDAIVETYETKVGPRNGAHVVAKAWSDADFAAWLKRDATAAIASLGFTGRQGEHMRAVFNTPETHNLIVCTLCSCYPWSVLGLPPVWYKAPAYRSRAVIDPRGVLAEFGLTLPKEKKIRVWDSTAELRYLVIPERPDGTDGMDEAALAGLVSRDAMIGTAIAGSWKVSAAGSSKISAAGSPEALP

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
3 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
4 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
5 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
6 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
7 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
8 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
9 2519899620 Rhizobium sp. Pop5 Isolate Nodule
10 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
11 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
12 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
13 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
14 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
15 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
16 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
17 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
18 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
19 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
20 2643221558 Rhizobium sp. Root149 Isolate Unclassified
21 2643221607 Rhizobium sp. Root73 Isolate Unclassified
22 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
23 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
24 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
25 2643221668 Ensifer sp. Root423 Isolate Unclassified
26 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
27 2643221688 Rhizobium sp. Root482 Isolate Unclassified
28 2643221718 Rhizobium sp. Root268 Isolate Unclassified
29 2643221719 Rhizobium sp. Root274 Isolate Unclassified
30 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
31 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
32 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
33 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
34 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
35 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
36 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
37 2791355261 Rhizobium sp. J15 Isolate Nodule
38 2791355263 Rhizobium chutanense C5 Isolate Nodule
39 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
40 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
41 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
42 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
43 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
44 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
45 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
46 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
47 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
48 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
49 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
50 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
51 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
52 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
53 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
54 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
55 2936381700 Rhizobium chutanense C16 Isolate Unclassified
56 2996893221 Rhizobium sp. R635 Isolate Nodule
57 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
58 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
59 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
60 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
61 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
62 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
63 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
64 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
65 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
66 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
67 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
68 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
69 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
70 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
71 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
72 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
73 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
74 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
75 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
76 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
77 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
78 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
79 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
80 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
81 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
82 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
83 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
84 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
85 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
86 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
87 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
88 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
89 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
90 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
91 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
92 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
93 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
94 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
95 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
96 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
97 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
98 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
99 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
100 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
101 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
102 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
103 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
104 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
105 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
106 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
107 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
108 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
109 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
111 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
112 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
113 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
114 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
115 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
116 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
117 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
119 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
120 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
133 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
136 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
137 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
138 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
139 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
140 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
142 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
143 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
144 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
145 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
146 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
147 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
148 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
149 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
150 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
151 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
152 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
153 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
154 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
155 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
156 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
157 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
158 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
159 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
160 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
161 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
162 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
163 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
164 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
165 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
166 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
167 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
168 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
169 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
170 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
171 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
172 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
173 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
174 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
175 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
176 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
177 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
178 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
179 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
180 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
181 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
182 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
183 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
184 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
185 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
186 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
187 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
188 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
189 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
190 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
191 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
192 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
197 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
198 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
200 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
201 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
202 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
203 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
204 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
205 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
206 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
207 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
208 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
209 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
210 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
211 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
212 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
213 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
214 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
215 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
216 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
217 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
218 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
219 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
220 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
221 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
222 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
223 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
224 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 73.76
Metatranscriptomes 0.71
Isolates 25.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.24
Nodule 14.18
Rhizoplane 1.42
Rhizosphere 34.75
Stem 0
Stem Tuber 0
Unclassified 23.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10022870 3300001979 Bacteria 2144
2 JGI25155J39150_1000001 3300002704 Bacteria 354543
3 JGI25156J39149_1000001 3300002705 Bacteria 354557
4 JGI25162J39368_1000380 3300002737 Bacteria 37780
5 JGI25154J39366_1000011 3300002738 Bacteria 296007
6 JGI25158J39367_1000129 3300002739 Bacteria 17721
7 JGI25157J39369_1000079 3300002741 Bacteria 86111
8 JGI25152J39213_1004611 3300002773 Bacteria 4285
9 JGI25152J39213_1010835 3300002773 Bacteria 2057
10 JGI25159J45721_1000613 3300002987 Bacteria 15891
11 JGI25159J45721_1001660 3300002987 Bacteria 9022
12 JGI25165J46597_1000422 3300003214 Bacteria 43957
13 JGI25153J46596_10003058 3300003215 Bacteria 9445
14 JGI25153J46596_10009561 3300003215 Bacteria 4484
15 JGI25153J46596_10011070 3300003215 Bacteria 4018
16 JGI25160J50197_1000001 3300003354 Bacteria 782301
17 JGI25160J50197_1008873 3300003354 Bacteria 3784
18 JGI25161J50226_1000001 3300003374 Bacteria 655036
19 JGI25161J50226_1000099 3300003374 Bacteria 70186
20 JGI25161J50226_1000140 3300003374 Bacteria 50175
21 Ga0006562J51391_1036025 3300003578 Bacteria 1556
22 Ga0055526_1005523 3300003771 Bacteria 7236
23 Ga0055524_1002368 3300003775 Bacteria 9799
24 Ga0055536_1009417 3300003781 Bacteria 4039
25 Ga0055528_1003598 3300003790 Bacteria 7716
26 Ga0055530_10018535 3300003791 Bacteria 2142
27 Ga0055530_10029275 3300003791 Bacteria 1474
28 Ga0055540_1001971 3300003792 Bacteria 11472
29 Ga0055540_1008899 3300003792 Bacteria 3547
30 Ga0055531_10004084 3300003794 Bacteria 9041
31 Ga0055531_10010659 3300003794 Bacteria 4539
32 Ga0055543_1000003 3300004625 Bacteria 358656
33 Ga0055543_1000128 3300004625 Bacteria 63029
34 Ga0065165_1000068 3300005262 Bacteria 170609
35 Ga0065165_1003952 3300005262 Bacteria 9730
36 Ga0065165_1017816 3300005262 Bacteria 2600
37 Ga0065165_1018622 3300005262 Bacteria 2506
38 Ga0070676_10323987 3300005328 Bacteria 1052
39 Ga0070669_100017900 3300005353 Bacteria 5059
40 Ga0070671_100043123 3300005355 Bacteria 3750
41 Ga0070674_100102228 3300005356 Bacteria 2090
42 Ga0070673_100636683 3300005364 Bacteria 975
43 Ga0070667_100648567 3300005367 Bacteria 975
44 Ga0070700_100377504 3300005441 Bacteria 1059
45 Ga0070665_100181663 3300005548 Bacteria 2105
46 Ga0070665_100182685 3300005548 Bacteria 2098
47 Ga0068856_100025945 3300005614 Bacteria 5715
48 Ga0068862_100010663 3300005844 Bacteria 7592
49 Ga0068862_100318333 3300005844 Bacteria 1435
50 Ga0075369_10014179 3300006186 Bacteria 3180
51 Ga0075370_10103814 3300006353 Bacteria 1647
52 Ga0075428_100107175 3300006844 Bacteria 3046
53 Ga0068865_100180091 3300006881 Bacteria 1627
54 Ga0099794_10139875 3300007265 Bacteria 1226
55 Ga0105250_10107133 3300009092 Bacteria 1143
56 Ga0114129_10326183 3300009147 Bacteria 2040
57 Ga0123341_1000032 3300009765 Bacteria 62527
58 Ga0105239_10041426 3300010375 Bacteria 5047
59 Ga0157380_10166976 3300014326 Bacteria 1919
60 Ga0213874_10078308 3300021377 Bacteria 1067
61 Ga0209435_100012 3300025206 Bacteria 401621
62 Ga0209436_100029 3300025208 Bacteria 85964
63 Ga0209437_100047 3300025233 Bacteria 405163
64 Ga0207425_1006673 3300025245 Bacteria 3131
65 Ga0207425_1017064 3300025245 Bacteria 1602
66 Ga0209646_1000026 3300025246 Bacteria 401621
67 Ga0209026_1000014 3300025250 Bacteria 401621
68 Ga0209148_1022731 3300025254 Bacteria 1004
69 Ga0209759_1000012 3300025256 Bacteria 401621
70 Ga0209129_1000384 3300025258 Bacteria 35556
71 Ga0209129_1002877 3300025258 Bacteria 7934
72 Ga0209129_1005114 3300025258 Bacteria 4803
73 Ga0209129_1005300 3300025258 Bacteria 4632
74 Ga0209233_1000048 3300025261 Bacteria 453669
75 Ga0209130_1000003 3300025284 Bacteria 677988
76 Ga0209130_1000020 3300025284 Bacteria 379297
77 Ga0209130_1027339 3300025284 Bacteria 1213
78 Ga0209025_1009763 3300025294 Bacteria 6626
79 Ga0209025_1137729 3300025294 Bacteria 697
80 Ga0209564_1000512 3300025295 Bacteria 63708
81 Ga0209564_1020061 3300025295 Bacteria 2468
82 Ga0209758_1000642 3300025297 Bacteria 53219
83 Ga0209758_1002951 3300025297 Bacteria 16327
84 Ga0209758_1003364 3300025297 Bacteria 14653
85 Ga0209758_1012299 3300025297 Bacteria 4804
86 Ga0209758_1070393 3300025297 Bacteria 1104
87 Ga0209050_1012937 3300025298 Bacteria 3772
88 Ga0209256_1000442 3300025299 Bacteria 63395
89 Ga0209256_1009553 3300025299 Bacteria 4229
90 Ga0207426_1000008 3300025302 Bacteria 848730
91 Ga0207426_1000011 3300025302 Bacteria 791203
92 Ga0209051_1002410 3300025303 Bacteria 13449
93 Ga0209051_1007466 3300025303 Bacteria 5969
94 Ga0209257_1003491 3300025304 Bacteria 13392
95 Ga0209257_1024872 3300025304 Bacteria 2060
96 Ga0207692_10068387 3300025898 Bacteria 1862
97 Ga0207681_10056866 3300025923 Bacteria 2670
98 Ga0207659_10051374 3300025926 Bacteria 2932
99 Ga0207644_10062668 3300025931 Bacteria 2698
100 Ga0207706_10925155 3300025933 Bacteria 736
101 Ga0207704_10043698 3300025938 Bacteria 2648
102 Ga0207651_10974127 3300025960 Bacteria 757
103 Ga0207702_10018061 3300026078 Bacteria 5835
104 Ga0207675_100138466 3300026118 Bacteria 2311
105 Ga0209371_1007288 3300027312 Bacteria 3884
106 Ga0207428_10000078 3300027907 Bacteria 136571
107 Ga0268266_10414228 3300028379 Bacteria 1276
108 Ga0268265_10404801 3300028380 Bacteria 1262
109 Ga0307515_10000556 3300028794 Bacteria 88174
110 Ga0307515_10000788 3300028794 Bacteria 72975
111 Ga0307515_10017597 3300028794 Bacteria 13001
112 Ga0307515_10288417 3300028794 Bacteria 1340
113 Ga0268256_1007489 3300030500 Bacteria 3884
114 Ga0307513_10025659 3300031456 Bacteria 6820
115 Ga0307516_10396950 3300031730 Bacteria 1039
116 Ga0307412_10260797 3300031911 Bacteria 1351
117 Ga0316596_1037649 3300033541 Bacteria 1266
118 Ga0373936_0022344 3300035113 Bacteria 2463
119 Ga0395905_0001960 3300037471 Bacteria 23549
120 Ga0436364_1477734 3300037853 Bacteria 704
121 Ga0439465_0001082 3300041413 Bacteria 8718
122 Ga0439465_0114580 3300041413 Bacteria 941
123 Ga0439432_009604 3300042006 Bacteria 3372
124 Ga0439458_0033371 3300042157 Bacteria 1233
125 Ga0439435_0000576 3300042436 Bacteria 5939
126 Ga0439459_0150651 3300042438 Bacteria 608
127 Ga0466972_0243680 3300044658 Bacteria 841
128 Ga0466963_0006812 3300044694 Bacteria 6796
129 Ga0466970_0011908 3300044765 Bacteria 4438
130 Ga0466958_0009384 3300045836 Bacteria 5453
131 Ga0495617_013469 3300046452 Bacteria 2784
132 Ga0495629_0034354 3300046459 Bacteria 3585
133 Ga0495638_0000195 3300046460 Bacteria 88030
134 Ga0495605_0007566 3300046474 Bacteria 6160
135 Ga0495585_0006794 3300046492 Bacteria 7061
136 Ga0495583_0057505 3300046506 Bacteria 1749
137 Ga0495606_0002164 3300046507 Bacteria 23646
138 Ga0495610_0011895 3300046512 Bacteria 5282
139 Ga0495616_0241836 3300046513 Bacteria 778
140 Ga0495620_0117510 3300046515 Bacteria 1050
141 Ga0495631_0001628 3300046518 Bacteria 13398
142 Ga0495632_0034615 3300046519 Bacteria 2583
143 Ga0495643_0078291 3300046522 Bacteria 1726
144 Ga0495587_0238127 3300046536 Bacteria 1024
145 Ga0495668_0013421 3300046616 Bacteria 4832
146 Ga0495634_0243220 3300046642 Bacteria 1103
147 Ga0495611_0009701 3300046648 Bacteria 4069
148 Ga0495625_0000621 3300046660 Bacteria 51568
149 Ga0495625_0299579 3300046660 Bacteria 1029
150 Ga0495657_0020297 3300046675 Bacteria 4779
151 Ga0495658_0110688 3300046683 Bacteria 1651
152 Ga0495624_0114715 3300046690 Bacteria 1656
153 Ga0495671_0149582 3300046692 Bacteria 1137
154 Ga0495600_0119365 3300046809 Bacteria 1715
155 Ga0495660_0021318 3300046810 Bacteria 3711
156 Ga0495604_0043252 3300047317 Bacteria 3527
157 Ga0495672_0005251 3300047320 Bacteria 10318
158 Ga0495683_0080059 3300047323 Bacteria 1595
159 Ga0496102_0669025 3300048905 Bacteria 961
160 Ga0496106_0000578 3300048909 Bacteria 26182
161 Ga0496116_0007744 3300048919 Bacteria 9449
162 Ga0496116_0021014 3300048919 Bacteria 4936
163 Ga0496116_0025850 3300048919 Bacteria 4306
164 Ga0496117_0220580 3300048920 Bacteria 1056
165 Ga0496118_0200631 3300048921 Bacteria 1182
166 Ga0496119_0019449 3300048922 Bacteria 5001
167 Ga0496121_0005561 3300048924 Bacteria 16097
168 Ga0496121_0061579 3300048924 Bacteria 3078
169 Ga0496121_0103821 3300048924 Bacteria 2186
170 Ga0496121_0439731 3300048924 Bacteria 843
171 Ga0496122_0002690 3300048925 Bacteria 24724
172 Ga0496122_0035177 3300048925 Bacteria 4083
173 Ga0496122_0043776 3300048925 Bacteria 3503
174 Ga0496122_0126436 3300048925 Bacteria 1635
175 Ga0496122_0138231 3300048925 Bacteria 1530
176 Ga0496123_0000054 3300048926 Bacteria 234046
177 Ga0496123_0033667 3300048926 Bacteria 3683
178 Ga0496123_0117255 3300048926 Bacteria 1506
179 Ga0496123_0205694 3300048926 Bacteria 1005
180 Ga0496124_0046133 3300048927 Bacteria 3733
181 Ga0496124_0197117 3300048927 Bacteria 1535
182 Ga0496124_0280921 3300048927 Bacteria 1214
183 Ga0496125_0066189 3300048928 Bacteria 2857
184 Ga0496125_0085645 3300048928 Bacteria 2387
185 Ga0496125_0286705 3300048928 Bacteria 1016
186 Ga0496126_0044422 3300048929 Bacteria 4092
187 Ga0501032_0045264 3300049569 Bacteria 2977
188 Ga0501033_0041206 3300049570 Bacteria 3446
189 Ga0501033_0455292 3300049570 Bacteria 888
190 Ga0501034_0000538 3300049571 Bacteria 60200
191 Ga0501034_0071468 3300049571 Bacteria 3480
192 Ga0501034_0207431 3300049571 Bacteria 1915
193 Ga0501038_0104965 3300049574 Bacteria 2348
194 Ga0501043_0482239 3300049579 Bacteria 928
195 Ga0501047_0242878 3300049581 Bacteria 1651
196 Ga0501035_0290308 3300049822 Bacteria 1380
197 Ga0501044_0244253 3300049823 Bacteria 1738
198 Ga0501044_0673945 3300049823 Bacteria 921
199 nmdc:mga0yw44_399776_c1 3300050492 Bacteria 929
200 nmdc:mga08y16_66_c1 3300050511 Bacteria 87732
201 Ga0500610_0034789 3300053079 Bacteria 2580
202 Ga0495619_0267049 3300053085 Bacteria 1186
203 Ga0500643_023448 3300053087 Bacteria 1971
204 Ga0500654_080632 3300053099 Bacteria 1519
205 Ga0500557_003926 3300053105 Bacteria 3039
206 Ga0500594_0002292 3300053118 Bacteria 4149
207 Ga0500559_0122944 3300053136 Bacteria 1208
208 Ga0500568_0005767 3300053139 Bacteria 6338
209 Ga0500573_0000585 3300053140 Bacteria 16001
210 Ga0500616_0045814 3300053153 Bacteria 2328

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035113 Ga0373936_0022344 Ga0373936_0022344_876_1499 185
2 3300048909 Ga0496106_0000578 Ga0496106_0000578_20165_20737 185
3 3300003792 Ga0055540_1008899 Ga0055540_10088995 187
4 3300025898 Ga0207692_10068387 Ga0207692_100683872 187
5 3300048925 Ga0496122_0138231 Ga0496122_0138231_190_861 187
6 iso_pu_bacteria 2643221558 2643811588 187
7 3300042438 Ga0439459_0150651 Ga0439459_0150651_14_580 188
8 3300002739 JGI25158J39367_1000129 JGI25158J39367_10001292 189
9 3300002987 JGI25159J45721_1000613 JGI25159J45721_10006138 189
10 3300003215 JGI25153J46596_10003058 JGI25153J46596_100030583 189
11 3300003374 JGI25161J50226_1000099 JGI25161J50226_100009923 189
12 3300003374 JGI25161J50226_1000140 JGI25161J50226_100014046 189
13 3300003771 Ga0055526_1005523 Ga0055526_10055232 189
14 3300003790 Ga0055528_1003598 Ga0055528_10035983 189
15 3300003792 Ga0055540_1001971 Ga0055540_100197112 189
16 3300004625 Ga0055543_1000128 Ga0055543_100012817 189
17 3300025245 Ga0207425_1006673 Ga0207425_10066735 189
18 3300025258 Ga0209129_1002877 Ga0209129_10028779 189
19 3300025294 Ga0209025_1009763 Ga0209025_10097639 189
20 3300025297 Ga0209758_1002951 Ga0209758_100295112 189
21 3300048919 Ga0496116_0021014 Ga0496116_0021014_3383_4039 190
22 3300048924 Ga0496121_0103821 Ga0496121_0103821_860_1519 190
23 3300048925 Ga0496122_0035177 Ga0496122_0035177_1229_1885 190
24 3300048926 Ga0496123_0033667 Ga0496123_0033667_187_843 190
25 3300048928 Ga0496125_0085645 Ga0496125_0085645_965_1621 190
26 3300002773 JGI25152J39213_1004611 JGI25152J39213_10046115 191
27 3300003215 JGI25153J46596_10011070 JGI25153J46596_100110703 191
28 3300003578 Ga0006562J51391_1036025 Ga0006562J51391_10360252 191
29 3300003794 Ga0055531_10010659 Ga0055531_100106594 191
30 3300005548 Ga0070665_100182685 Ga0070665_1001826852 191
31 3300006353 Ga0075370_10103814 Ga0075370_101038142 191
32 3300025258 Ga0209129_1000384 Ga0209129_10003844 191
33 3300025297 Ga0209758_1003364 Ga0209758_10033648 191
34 3300025303 Ga0209051_1007466 Ga0209051_10074665 191
35 3300025926 Ga0207659_10051374 Ga0207659_100513743 191
36 3300042436 Ga0439435_0000576 Ga0439435_0000576_4945_5523 191
37 3300048919 Ga0496116_0007744 Ga0496116_0007744_3407_4081 191
38 3300048921 Ga0496118_0200631 Ga0496118_0200631_546_1166 191
39 3300048924 Ga0496121_0439731 Ga0496121_0439731_28_648 191
40 3300048926 Ga0496123_0205694 Ga0496123_0205694_188_763 191
41 3300048927 Ga0496124_0280921 Ga0496124_0280921_10_684 191
42 3300048928 Ga0496125_0286705 Ga0496125_0286705_19_594 191
43 3300049570 Ga0501033_0455292 Ga0501033_0455292_26_637 191
44 3300049822 Ga0501035_0290308 Ga0501035_0290308_491_1102 191
45 3300049823 Ga0501044_0673945 Ga0501044_0673945_273_884 191
46 3300053153 Ga0500616_0045814 Ga0500616_0045814_781_1392 191
47 3300003775 Ga0055524_1002368 Ga0055524_10023686 192
48 3300010375 Ga0105239_10041426 Ga0105239_100414266 192
49 3300025294 Ga0209025_1137729 Ga0209025_11377291 192
50 3300025295 Ga0209564_1020061 Ga0209564_10200613 192
51 3300025299 Ga0209256_1000442 Ga0209256_100044263 192
52 3300003354 JGI25160J50197_1008873 JGI25160J50197_10088733 193
53 3300005262 Ga0065165_1017816 Ga0065165_10178164 193
54 3300005548 Ga0070665_100181663 Ga0070665_1001816632 193
55 3300006186 Ga0075369_10014179 Ga0075369_100141793 193
56 3300009092 Ga0105250_10107133 Ga0105250_101071332 193
57 3300025208 Ga0209436_100029 Ga0209436_10002986 193
58 3300025245 Ga0207425_1017064 Ga0207425_10170642 193
59 3300025258 Ga0209129_1005114 Ga0209129_10051146 193
60 3300025284 Ga0209130_1000020 Ga0209130_1000020338 193
61 3300025295 Ga0209564_1000512 Ga0209564_100051244 193
62 3300025297 Ga0209758_1012299 Ga0209758_10122992 193
63 3300025299 Ga0209256_1009553 Ga0209256_10095532 193
64 3300025302 Ga0207426_1000008 Ga0207426_1000008405 193
65 3300025304 Ga0209257_1024872 Ga0209257_10248722 193
66 3300028379 Ga0268266_10414228 Ga0268266_104142281 193
67 3300041413 Ga0439465_0001082 Ga0439465_0001082_3495_4169 193
68 3300046459 Ga0495629_0034354 Ga0495629_0034354_2881_3519 193
69 3300046512 Ga0495610_0011895 Ga0495610_0011895_3666_4337 193
70 3300046675 Ga0495657_0020297 Ga0495657_0020297_3240_3878 193
71 3300046809 Ga0495600_0119365 Ga0495600_0119365_694_1332 193
72 3300048919 Ga0496116_0025850 Ga0496116_0025850_1288_1962 193
73 3300048928 Ga0496125_0066189 Ga0496125_0066189_14_664 193
74 3300050492 nmdc:mga0yw44_399776_c1 nmdc:mga0yw44_399776_c1_178_798 193
75 3300053085 Ga0495619_0267049 Ga0495619_0267049_166_804 193
76 3300003215 JGI25153J46596_10009561 JGI25153J46596_100095615 194
77 3300003781 Ga0055536_1009417 Ga0055536_10094173 194
78 3300003791 Ga0055530_10018535 Ga0055530_100185353 194
79 3300003794 Ga0055531_10004084 Ga0055531_100040844 194
80 3300005262 Ga0065165_1003952 Ga0065165_10039523 194
81 3300005262 Ga0065165_1018622 Ga0065165_10186222 194
82 3300005328 Ga0070676_10323987 Ga0070676_103239872 194
83 3300005353 Ga0070669_100017900 Ga0070669_1000179006 194
84 3300005356 Ga0070674_100102228 Ga0070674_1001022283 194
85 3300005364 Ga0070673_100636683 Ga0070673_1006366831 194
86 3300005367 Ga0070667_100648567 Ga0070667_1006485672 194
87 3300005441 Ga0070700_100377504 Ga0070700_1003775042 194
88 3300005844 Ga0068862_100010663 Ga0068862_1000106634 194
89 3300006881 Ga0068865_100180091 Ga0068865_1001800912 194
90 3300009765 Ga0123341_1000032 Ga0123341_100003227 194
91 3300014326 Ga0157380_10166976 Ga0157380_101669762 194
92 3300025284 Ga0209130_1027339 Ga0209130_10273392 194
93 3300025297 Ga0209758_1000642 Ga0209758_100064236 194
94 3300025297 Ga0209758_1070393 Ga0209758_10703932 194
95 3300025298 Ga0209050_1012937 Ga0209050_10129376 194
96 3300025303 Ga0209051_1002410 Ga0209051_100241011 194
97 3300025304 Ga0209257_1003491 Ga0209257_100349110 194
98 3300025923 Ga0207681_10056866 Ga0207681_100568663 194
99 3300025933 Ga0207706_10925155 Ga0207706_109251551 194
100 3300025938 Ga0207704_10043698 Ga0207704_100436984 194
101 3300025960 Ga0207651_10974127 Ga0207651_109741271 194
102 3300026118 Ga0207675_100138466 Ga0207675_1001384663 194
103 3300028380 Ga0268265_10404801 Ga0268265_104048012 194
104 3300042157 Ga0439458_0033371 Ga0439458_0033371_457_1080 194
105 3300046507 Ga0495606_0002164 Ga0495606_0002164_14180_14854 194
106 3300048924 Ga0496121_0005561 Ga0496121_0005561_7962_8636 194
107 3300048925 Ga0496122_0002690 Ga0496122_0002690_23841_24479 194
108 3300048926 Ga0496123_0000054 Ga0496123_0000054_57413_58051 194
109 3300048927 Ga0496124_0197117 Ga0496124_0197117_664_1302 194
110 3300003791 Ga0055530_10029275 Ga0055530_100292751 195
111 3300009147 Ga0114129_10326183 Ga0114129_103261833 195
112 3300037471 Ga0395905_0001960 Ga0395905_0001960_1814_2458 195
113 3300046452 Ga0495617_013469 Ga0495617_013469_908_1552 195
114 3300046474 Ga0495605_0007566 Ga0495605_0007566_2134_2778 195
115 3300046492 Ga0495585_0006794 Ga0495585_0006794_2032_2676 195
116 3300046506 Ga0495583_0057505 Ga0495583_0057505_630_1274 195
117 3300046513 Ga0495616_0241836 Ga0495616_0241836_100_744 195
118 3300046515 Ga0495620_0117510 Ga0495620_0117510_209_853 195
119 3300046518 Ga0495631_0001628 Ga0495631_0001628_10053_10697 195
120 3300046519 Ga0495632_0034615 Ga0495632_0034615_1474_2118 195
121 3300046536 Ga0495587_0238127 Ga0495587_0238127_323_955 195
122 3300046616 Ga0495668_0013421 Ga0495668_0013421_1497_2141 195
123 3300046642 Ga0495634_0243220 Ga0495634_0243220_34_666 195
124 3300046648 Ga0495611_0009701 Ga0495611_0009701_1623_2267 195
125 3300046660 Ga0495625_0000621 Ga0495625_0000621_42027_42671 195
126 3300046683 Ga0495658_0110688 Ga0495658_0110688_291_923 195
127 3300046690 Ga0495624_0114715 Ga0495624_0114715_600_1232 195
128 3300046692 Ga0495671_0149582 Ga0495671_0149582_122_766 195
129 3300046810 Ga0495660_0021318 Ga0495660_0021318_1495_2139 195
130 3300047317 Ga0495604_0043252 Ga0495604_0043252_1050_1682 195
131 3300048924 Ga0496121_0061579 Ga0496121_0061579_1704_2357 195
132 3300048929 Ga0496126_0044422 Ga0496126_0044422_2350_3003 195
133 3300049569 Ga0501032_0045264 Ga0501032_0045264_153_770 195
134 3300049570 Ga0501033_0041206 Ga0501033_0041206_1385_2002 195
135 3300049571 Ga0501034_0071468 Ga0501034_0071468_528_1145 195
136 3300049574 Ga0501038_0104965 Ga0501038_0104965_757_1374 195
137 3300049579 Ga0501043_0482239 Ga0501043_0482239_291_908 195
138 3300049581 Ga0501047_0242878 Ga0501047_0242878_667_1284 195
139 3300049823 Ga0501044_0244253 Ga0501044_0244253_754_1371 195
140 3300053079 Ga0500610_0034789 Ga0500610_0034789_1252_1896 195
141 3300053087 Ga0500643_023448 Ga0500643_023448_560_1204 195
142 3300053105 Ga0500557_003926 Ga0500557_003926_559_1203 195
143 3300053118 Ga0500594_0002292 Ga0500594_0002292_811_1455 195
144 3300053136 Ga0500559_0122944 Ga0500559_0122944_383_1015 195
145 iso_pu_bacteria 2919171160 2919174777 195
146 3300028794 Ga0307515_10288417 Ga0307515_102884172 196
147 3300031911 Ga0307412_10260797 Ga0307412_102607972 196
148 3300033541 Ga0316596_1037649 Ga0316596_10376491 196
149 3300046460 Ga0495638_0000195 Ga0495638_0000195_36857_37495 196
150 3300046522 Ga0495643_0078291 Ga0495643_0078291_116_754 196
151 3300046660 Ga0495625_0299579 Ga0495625_0299579_233_856 196
152 3300047320 Ga0495672_0005251 Ga0495672_0005251_922_1560 196
153 3300053139 Ga0500568_0005767 Ga0500568_0005767_2630_3268 196
154 3300002773 JGI25152J39213_1010835 JGI25152J39213_10108352 197
155 3300002987 JGI25159J45721_1001660 JGI25159J45721_100166012 197
156 3300003354 JGI25160J50197_1000001 JGI25160J50197_1000001729 197
157 3300003374 JGI25161J50226_1000001 JGI25161J50226_100000121 197
158 3300004625 Ga0055543_1000003 Ga0055543_100000337 197
159 3300005262 Ga0065165_1000068 Ga0065165_1000068131 197
160 3300005355 Ga0070671_100043123 Ga0070671_1000431234 197
161 3300005844 Ga0068862_100318333 Ga0068862_1003183332 197
162 3300021377 Ga0213874_10078308 Ga0213874_100783082 197
163 3300025258 Ga0209129_1005300 Ga0209129_10053002 197
164 3300025284 Ga0209130_1000003 Ga0209130_100000347 197
165 3300025302 Ga0207426_1000011 Ga0207426_1000011731 197
166 3300025931 Ga0207644_10062668 Ga0207644_100626684 197
167 3300028794 Ga0307515_10000788 Ga0307515_1000078829 197
168 3300031456 Ga0307513_10025659 Ga0307513_100256592 197
169 3300037853 Ga0436364_1477734 Ga0436364_1477734_67_684 197
170 3300047323 Ga0495683_0080059 Ga0495683_0080059_468_1118 197
171 3300048905 Ga0496102_0669025 Ga0496102_0669025_265_924 197
172 3300048925 Ga0496122_0126436 Ga0496122_0126436_426_1085 197
173 3300049571 Ga0501034_0000538 Ga0501034_0000538_8155_8766 197
174 3300049571 Ga0501034_0207431 Ga0501034_0207431_1197_1820 197
175 3300053099 Ga0500654_080632 Ga0500654_080632_544_1167 197
176 iso_pu_bacteria 3002141150 3002144690 197
177 3300005614 Ga0068856_100025945 Ga0068856_1000259452 198
178 3300006844 Ga0075428_100107175 Ga0075428_1001071754 198
179 3300026078 Ga0207702_10018061 Ga0207702_100180612 198
180 3300027907 Ga0207428_10000078 Ga0207428_10000078104 198
181 3300028794 Ga0307515_10000556 Ga0307515_1000055621 198
182 3300028794 Ga0307515_10017597 Ga0307515_100175978 198
183 3300031730 Ga0307516_10396950 Ga0307516_103969502 198
184 3300042006 Ga0439432_009604 Ga0439432_009604_440_1087 198
185 3300044658 Ga0466972_0243680 Ga0466972_0243680_178_822 198
186 3300044694 Ga0466963_0006812 Ga0466963_0006812_3205_3849 198
187 3300044765 Ga0466970_0011908 Ga0466970_0011908_3132_3776 198
188 3300045836 Ga0466958_0009384 Ga0466958_0009384_2352_2996 198
189 3300048920 Ga0496117_0220580 Ga0496117_0220580_195_842 198
190 3300048922 Ga0496119_0019449 Ga0496119_0019449_1267_1914 198
191 3300048925 Ga0496122_0043776 Ga0496122_0043776_987_1634 198
192 3300048926 Ga0496123_0117255 Ga0496123_0117255_773_1420 198
193 3300048927 Ga0496124_0046133 Ga0496124_0046133_42_689 198
194 3300050511 nmdc:mga08y16_66_c1 nmdc:mga08y16_66_c1_69584_70228 198
195 3300053140 Ga0500573_0000585 Ga0500573_0000585_8708_9373 198
196 iso_pu_bacteria 2585427633 2585996123 198
197 iso_pu_bacteria 2643221637 2644210094 198
198 iso_pu_bacteria 2643221718 2644653646 198
199 iso_pu_bacteria 2854916844 2854918761 198
200 iso_pu_bacteria 2996893221 2996896436 198
201 iso_pu_bacteria 8018127388 8018134013 198
202 iso_pu_bacteria 8054563764 8054565675 198
203 3300002737 JGI25162J39368_1000380 JGI25162J39368_10003806 199
204 3300003214 JGI25165J46597_1000422 JGI25165J46597_10004224 199
205 3300025233 Ga0209437_100047 Ga0209437_10004719 199
206 3300025254 Ga0209148_1022731 Ga0209148_10227312 199
207 3300025261 Ga0209233_1000048 Ga0209233_1000048383 199
208 3300027312 Ga0209371_1007288 Ga0209371_10072882 199
209 3300030500 Ga0268256_1007489 Ga0268256_10074894 199
210 iso_pu_bacteria 2509276033 2509445781 199
211 iso_pu_bacteria 2509276033 2509446917 199
212 iso_pu_bacteria 2510917022 2511135314 199
213 iso_pu_bacteria 2513237159 2513996875 199
214 iso_pu_bacteria 2582581307 2585271051 199
215 iso_pu_bacteria 2585427531 2585558775 199
216 iso_pu_bacteria 2585427609 2585904255 199
217 iso_pu_bacteria 2585428125 2587980628 199
218 iso_pu_bacteria 2600254933 2600374419 199
219 iso_pu_bacteria 2791355259 2793314617 199
220 iso_pu_bacteria 2854896431 2854899208 199
221 3300041413 Ga0439465_0114580 Ga0439465_0114580_209_862 200
222 iso_pu_bacteria 2791355263 2793339123 200
223 iso_pu_bacteria 2838022645 2838028395 200
224 iso_pu_bacteria 2842198810 2842204474 200
225 iso_pu_bacteria 8005542996 8005545543 200
226 iso_pu_bacteria 8024486573 8024487946 200
227 iso_pu_bacteria 2509276021 2509392136 201
228 iso_pu_bacteria 2510065019 2510133875 201
229 iso_pu_bacteria 2513237144 2513909189 201
230 iso_pu_bacteria 2517287029 2517407319 201
231 iso_pu_bacteria 2519899620 2520381430 201
232 iso_pu_bacteria 2724679232 2725952640 201
233 iso_pu_bacteria 2841864319 2841869878 201
234 iso_pu_bacteria 2842341865 2842346376 201
235 iso_pu_bacteria 2842363717 2842369044 201
236 iso_pu_bacteria 2936367885 2936372124 201
237 iso_pu_bacteria 2936381700 2936382974 201
238 iso_pu_bacteria 3005445848 3005448361 201
239 iso_pu_bacteria 8005301065 8005303042 201
240 iso_pu_bacteria 8005556819 8005557096 201
241 iso_pu_bacteria 8005688590 8005692188 201
242 iso_pu_bacteria 8024479707 8024482948 201
243 3300001979 JGI24740J21852_10022870 JGI24740J21852_100228703 202
244 3300002704 JGI25155J39150_1000001 JGI25155J39150_1000001215 202
245 3300002705 JGI25156J39149_1000001 JGI25156J39149_1000001118 202
246 3300002738 JGI25154J39366_1000011 JGI25154J39366_1000011266 202
247 3300002741 JGI25157J39369_1000079 JGI25157J39369_100007985 202
248 3300007265 Ga0099794_10139875 Ga0099794_101398752 202
249 3300025206 Ga0209435_100012 Ga0209435_100012266 202
250 3300025246 Ga0209646_1000026 Ga0209646_1000026266 202
251 3300025250 Ga0209026_1000014 Ga0209026_1000014266 202
252 3300025256 Ga0209759_1000012 Ga0209759_1000012266 202
253 iso_pu_bacteria 2512047086 2512533543 202
254 iso_pu_bacteria 2529292951 2530646033 202
255 iso_pu_bacteria 2582581306 2585267514 202
256 iso_pu_bacteria 2582581865 2585386576 202
257 iso_pu_bacteria 2585427608 2585898172 202
258 iso_pu_bacteria 2643221607 2644050592 202
259 iso_pu_bacteria 2643221636 2644205066 202
260 iso_pu_bacteria 2643221653 2644298597 202
261 iso_pu_bacteria 2643221668 2644374837 202
262 iso_pu_bacteria 2643221686 2644483510 202
263 iso_pu_bacteria 2643221688 2644491967 202
264 iso_pu_bacteria 2643221719 2644656826 202
265 iso_pu_bacteria 2667528174 2671111510 202
266 iso_pu_bacteria 2721755823 2724110677 202
267 iso_pu_bacteria 2738541317 2738948862 202
268 iso_pu_bacteria 2775507266 2778175342 202
269 iso_pu_bacteria 2791355082 2792585200 202
270 iso_pu_bacteria 2791355261 2793330518 202
271 iso_pu_bacteria 2838029111 2838029889 202
272 iso_pu_bacteria 2842475841 2842476826 202
273 iso_pu_bacteria 2842482326 2842484639 202
274 iso_pu_bacteria 2842502639 2842503417 202
275 iso_pu_bacteria 2842521101 2842522886 202
276 iso_pu_bacteria 2913308742 2913313725 202
277 iso_pu_bacteria 2919408235 2919409898 202
278 iso_pu_bacteria 8005430974 8005435072 202
279 iso_pu_bacteria 8005484373 8005485348 202
280 iso_pu_bacteria 8005682033 8005682975 202
281 iso_pu_bacteria 8049293176 8049295246 202
282 iso_pu_bacteria 8054558443 8054560760 202

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02979

NHase_alpha

Nitrile hydratase, alpha chain

21

204

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zge-assembly4.cif.gz_G double mutant h80w/h81w of fe-type nitrile hydratase from comamonas testosteroni ni1 0.858 12 198
4zgj-assembly1.cif.gz_A double mutant h80a/h81a of fe-type nitrile hydratase from comamonas testosteroni ni1 0.8575 12 198
4zgd-assembly7.cif.gz_M mutant r157a of fe-type nitrile hydratase from comamonas testosteroni ni1 0.8561 12 198
4fm4-assembly5.cif.gz_I wild type fe-type nitrile hydratase from comamonas testosteroni ni1 0.8558 12 198
3vyh-assembly1.cif.gz_A-2 crystal structure of aw116r mutant of nitrile hydratase from pseudonocardia thermophilla 0.8306 2 197
ID Description Score Start End Superfamily
4fm4G00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8435 12 198 3.90.330.10
4ob0A00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8232 2 197 3.90.330.10
2zcfA00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8147 1 198 3.90.330.10
2zcfA00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.807 1 198 3.90.330.10
2dd5C00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.7774 10 196 3.90.330.10
ID Description Score Start End GO Terms
AF-A0A436B7D9-F1-model_v4 deleted 0.982 139 198
AF-A0A4V3MDZ8-F1-model_v4 deleted 0.9815 115 199
AF-A0A7W1LT99-F1-model_v4 Nitrile hydratase subunit alpha 0.9807 128 195 GO:0003824
GO:0046914
AF-Q1T792-F1-model_v4 Thiocyanate hydrolase gamma subunit 0.9801 141 196 GO:0016787
GO:0046914
AF-A0A526YFI9-F1-model_v4 Nitrile hydratase subunit alpha (EC 4.2.1.84) 0.9796 50 198 GO:0018822
GO:0046914

Feature Viewer

pLDDT pTM Quality
86.66 0.81 High
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Predicted Structure (AlphaFold2)

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