F385268

General Info

Members Datasets Scaffolds Average Seq Length
282 230 564 995

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2791355406|2793979412
Length 1079
Sequence QGRRSSNVTRLLRHGFTDPSAAQRLLDAPELAGVFGDPVLLDGLGATADPDLALRRLVRLVEALPEAPGDGDDKGYADSRQALLDTLVTAKPMRDRLLGVLGISEALGDHLARHPRHWQALAYGPAAPHPAISGSEQALADGIWGEPGVGLTRSDALRLAYRRALLAIAARDVCGATDVTQVAAELADLADATLWAALEIAAEERPEDAAACRLAVIGMGECGGRELTYVPDVEVVFVAEALDGVEESTAVQAATRLAARLMRICSDVTAEGTIWPVDASLRPEGRDGPLVRTLSSHVAYYRRRARTWEFQALLKARPVAGDGALGRAYVDALTPLVWQAAKRENFVPEVRQIRRRVVENTPVAETDGESKLGPGDREVKLGPGSLRGVESAVQLLQLVHGRSDESLRRGTTLDALAALAAGGYVGRSDAAALAEAYRFLRAVEHRVQLHRLRRIHPVPRDETDLRRLGRSLGFRTEPATELVAAWRRHAREVRRLHEKLFYRPLLDAVARLETGEARLSSHAAGRWLEALGYADPSGALRHLEALVSGVSRKAAVQRTVLPGLLGRFADSEDPDAGLLGFRKIAEVLGKTPWYLRLLRDEGAATENLARVLSAGRLAPDLLLRAPEAVALLGAPEGPRPRGRAHLEQEVLAVVGRADGAEQAVAAARGVRQRELFRTAAADVIVSARLANRAERPTVSWPPPSGGNAPAAPATPRLTRGARPAADIPSALRGFEPHLPARPSNRTALPEEPTSPGALVDMVGDAVSDITAATLAGALRAAVRDTWGDELPTRFAVIGLGRFGGHELGYGSDADVLFVHEPREGADEHEASRAAFTVAHEMRRLLQLPTVDPPLLIDADLRPEGKSGPLVRSLASYAAYYRRWSLVWESQALLRAEPVAGDPGLGARFIELIDPLRYPAEGLSEGAIREIRRLKARMESERLPRGADRATHTKLGRGGLSDVEWTVQLLQMRNGAAEPGLRTTRTRRALAAAHDAGLIGGDDVQTLDQAWVLATRVRNAVMLVRGRPGDTFPRDSRELAAVAHYLGYAPGHVGEMLDDYRRTTRRARTVMERLFYGYDS

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
7 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
8 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
9 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
10 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
11 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
12 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
13 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
14 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
15 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
16 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
21 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
22 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
23 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
24 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
25 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
26 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
27 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
28 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
29 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
30 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
31 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
32 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
33 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
34 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
35 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
36 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
37 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
38 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
39 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
40 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
41 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
42 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
43 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
44 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
45 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
46 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
47 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
48 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
49 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
50 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
51 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
52 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
53 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
54 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
55 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
56 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
57 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
58 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
59 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
62 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
63 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
64 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
65 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
66 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
67 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
68 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
69 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
70 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
71 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
72 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
73 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
74 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
75 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
76 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
77 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
78 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
84 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
85 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
88 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
89 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
90 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
91 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
92 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
93 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
94 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
95 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
96 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
97 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
98 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
99 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
100 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
126 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
127 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
128 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
129 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
130 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
131 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
132 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
133 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
134 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
135 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
136 2643221548 Streptomyces sp. Root55 Isolate Unclassified
137 2643221578 Streptomyces sp. Root63 Isolate Unclassified
138 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
139 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
140 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
141 2643221647 Streptomyces sp. Root369 Isolate Unclassified
142 2643221670 Streptomyces sp. Root431 Isolate Unclassified
143 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
144 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
145 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
146 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
147 2643221714 Streptomyces sp. Root264 Isolate Unclassified
148 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
149 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
150 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
151 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
152 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
153 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
154 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
155 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
156 2808606448 Streptomyces sp. 193411 Isolate Unclassified
157 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
158 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
159 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
160 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
161 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
162 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
163 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
164 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
165 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
166 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
167 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
168 2862574272 Streptomyces sp. AcE210 Isolate Nodule
169 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
170 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
171 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
172 2867369537 Streptomyces sp. Z26 Isolate Unclassified
173 2867428634 Streptomyces sp. RP5T Isolate Unclassified
174 2867475112 Streptomyces sp. TM32 Isolate Unclassified
175 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
176 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
177 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
178 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
179 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
180 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
181 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
182 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
183 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
184 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
185 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
186 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
187 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
188 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
189 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
190 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
191 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
192 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
193 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
194 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
195 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
196 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
197 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
198 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
199 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
200 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
201 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
202 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
203 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
204 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
205 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
206 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
207 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
208 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
209 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
210 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
211 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
212 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
213 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
214 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
215 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
216 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
217 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
218 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
219 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
220 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
221 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
222 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
223 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
224 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
225 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
226 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
227 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
228 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
229 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
230 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 61.35
Metatranscriptomes 0.71
Isolates 37.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.13
Nodule 1.06
Rhizoplane 2.13
Rhizosphere 74.11
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10001683 3300003316 Bacteria 21074
2 Ga0006562J51391_1053560 3300003578 Bacteria 6410
3 Ga0006562J51391_1053561 3300003578 Bacteria 7036
4 Ga0070670_100025407 3300005331 Bacteria 5096
5 Ga0070669_100006090 3300005353 Bacteria 8703
6 Ga0070675_100044026 3300005354 Bacteria 3650
7 Ga0068853_100022879 3300005539 Bacteria 5225
8 Ga0075434_100023951 3300006871 Bacteria 5960
9 Ga0105246_10002102 3300011119 Bacteria 12010
10 Ga0182008_10002474 3300014497 Bacteria 11561
11 Ga0182007_10000440 3300015262 Bacteria 25194
12 Ga0183367_1009 3300015688 Bacteria 484598
13 Ga0213875_10005889 3300021388 Bacteria 6515
14 Ga0209758_1005862 3300025297 Bacteria 9174
15 Ga0207426_1002579 3300025302 Bacteria 11277
16 Ga0207426_1007725 3300025302 Bacteria 4460
17 Ga0209051_1008383 3300025303 Bacteria 5478
18 Ga0207647_10022236 3300025904 Bacteria 4216
19 Ga0207650_10008767 3300025925 Bacteria 6911
20 Ga0207691_10000972 3300025940 Bacteria 28495
21 Ga0207683_10005968 3300026121 Bacteria 10434
22 Ga0207428_10007887 3300027907 Bacteria 9677
23 Ga0307515_10016924 3300028794 Bacteria 13326
24 Ga0307511_10001658 3300030521 Bacteria 23438
25 Ga0307513_10007644 3300031456 Bacteria 13968
26 Ga0307508_10004511 3300031616 Bacteria 13580
27 Ga0307508_10014999 3300031616 Bacteria 7063
28 Ga0307508_10038335 3300031616 Bacteria 4308
29 Ga0307508_10058142 3300031616 Bacteria 3422
30 Ga0307514_10005781 3300031649 Bacteria 10929
31 Ga0307516_10012599 3300031730 Bacteria 9097
32 Ga0307405_10007056 3300031731 Bacteria 5585
33 Ga0307410_10010487 3300031852 Bacteria 5251
34 Ga0307412_10003040 3300031911 Bacteria 9291
35 Ga0307507_10009679 3300033179 Bacteria 12735
36 Ga0307510_10004861 3300033180 Bacteria 15883
37 Ga0373937_0001630 3300036401 Bacteria 18851
38 Ga0316582_0002535 3300036647 Bacteria 8632
39 Ga0316584_0027141 3300036712 Bacteria 4213
40 Ga0395899_0001405 3300037312 Bacteria 20644
41 Ga0395898_0005636 3300037466 Bacteria 13495
42 Ga0436364_1306559 3300037853 Bacteria 10654
43 Ga0439439_0005469 3300041406 Bacteria 2900
44 Ga0439447_007349 3300041407 Bacteria 3508
45 Ga0439466_0008450 3300041411 Bacteria 3881
46 Ga0451837_0803827 3300041494 Bacteria 4881
47 Ga0439432_004093 3300042006 Bacteria 5341
48 Ga0439449_0009022 3300042007 Bacteria 3782
49 Ga0439452_000892 3300042010 Bacteria 13673
50 Ga0439457_000471 3300042014 Bacteria 11597
51 Ga0439457_000983 3300042014 Bacteria 8569
52 Ga0439462_0003462 3300042015 Bacteria 3786
53 Ga0450919_000556 3300042121 Bacteria 4689
54 Ga0450894_000182 3300042131 Bacteria 11299
55 Ga0450899_000013 3300042135 Bacteria 13071
56 Ga0450903_001469 3300042138 Bacteria 4395
57 Ga0439434_0000448 3300042435 Bacteria 11750
58 Ga0466969_0004882 3300044656 Bacteria 7143
59 Ga0466966_0001382 3300044684 Bacteria 15624
60 Ga0466961_0001652 3300044693 Bacteria 13859
61 Ga0466963_0000121 3300044694 Bacteria 29248
62 Ga0466964_0004684 3300044706 Bacteria 5056
63 Ga0466971_0001956 3300044719 Bacteria 8717
64 Ga0466970_0000251 3300044765 Bacteria 26272
65 Ga0466970_0000404 3300044765 Bacteria 21023
66 Ga0466959_0001595 3300045049 Bacteria 13986
67 Ga0466967_0007123 3300045976 Bacteria 8024
68 Ga0495603_0000151 3300046455 Bacteria 34572
69 Ga0495603_0003106 3300046455 Bacteria 9866
70 Ga0495603_0017676 3300046455 Bacteria 4316
71 Ga0495629_0001223 3300046459 Bacteria 20188
72 Ga0495629_0001527 3300046459 Bacteria 18210
73 Ga0495629_0002261 3300046459 Bacteria 14844
74 Ga0495629_0028504 3300046459 Bacteria 3965
75 Ga0495629_0031948 3300046459 Bacteria 3727
76 Ga0495651_0042440 3300046462 Bacteria 3531
77 Ga0495580_0027771 3300046472 Bacteria 4116
78 Ga0495639_0004256 3300046475 Bacteria 6141
79 Ga0495662_0006717 3300046476 Bacteria 5732
80 Ga0495664_0006299 3300046477 Bacteria 6551
81 Ga0495585_0005498 3300046492 Bacteria 7976
82 Ga0495585_0020673 3300046492 Bacteria 3784
83 Ga0495594_0000274 3300046499 Bacteria 25385
84 Ga0495606_0012055 3300046507 Bacteria 6976
85 Ga0495616_0014068 3300046513 Bacteria 4492
86 Ga0495620_0009542 3300046515 Bacteria 5152
87 Ga0495643_0002315 3300046522 Bacteria 15364
88 Ga0495666_0003784 3300046526 Bacteria 7648
89 Ga0495640_0003185 3300046533 Bacteria 13221
90 Ga0495587_0015725 3300046536 Bacteria 4719
91 Ga0495645_0002905 3300046543 Bacteria 11629
92 Ga0495656_0000682 3300046615 Bacteria 10935
93 Ga0495634_0001882 3300046642 Bacteria 18047
94 Ga0495634_0007820 3300046642 Bacteria 7989
95 Ga0495611_0013546 3300046648 Bacteria 3474
96 Ga0495625_0009425 3300046660 Bacteria 8169
97 Ga0495635_0023060 3300046663 Bacteria 4338
98 Ga0495588_0016272 3300046674 Bacteria 3593
99 Ga0495657_0001465 3300046675 Bacteria 20360
100 Ga0495657_0007894 3300046675 Bacteria 8165
101 Ga0495657_0010491 3300046675 Bacteria 6970
102 Ga0495657_0016880 3300046675 Bacteria 5308
103 Ga0495657_0025660 3300046675 Bacteria 4182
104 Ga0495646_0000359 3300046680 Bacteria 23525
105 Ga0495613_0002352 3300046689 Bacteria 14318
106 Ga0495613_0003178 3300046689 Bacteria 12298
107 Ga0495670_0002876 3300046691 Bacteria 8495
108 Ga0495589_0008865 3300046794 Bacteria 5232
109 Ga0495600_0002946 3300046809 Bacteria 9921
110 Ga0495600_0012794 3300046809 Bacteria 5256
111 Ga0495604_0006554 3300047317 Bacteria 9230
112 Ga0495604_0013991 3300047317 Bacteria 6399
113 Ga0495604_0041356 3300047317 Bacteria 3615
114 Ga0495636_0000490 3300047318 Bacteria 14570
115 Ga0495636_0006321 3300047318 Bacteria 4653
116 Ga0495676_0001923 3300047321 Bacteria 18218
117 Ga0495676_0004646 3300047321 Bacteria 12575
118 Ga0495676_0005807 3300047321 Bacteria 11322
119 Ga0495676_0026563 3300047321 Bacteria 4982
120 Ga0495680_0014426 3300047322 Bacteria 6841
121 Ga0495687_001600 3300047443 Bacteria 20432
122 Ga0495687_002378 3300047443 Bacteria 15200
123 Ga0495687_010670 3300047443 Bacteria 5017
124 Ga0495675_0006778 3300047444 Bacteria 7027
125 Ga0495681_0004758 3300047470 Bacteria 9199
126 Ga0495684_0025445 3300047471 Bacteria 4548
127 Ga0495686_0006017 3300047472 Bacteria 9425
128 Ga0495614_0001593 3300048089 Bacteria 9854
129 Ga0495626_0008357 3300048091 Bacteria 5684
130 Ga0496101_0011864 3300048904 Bacteria 5800
131 Ga0496105_0015052 3300048908 Bacteria 6156
132 Ga0496109_0034318 3300048912 Bacteria 4568
133 Ga0496110_0015013 3300048913 Bacteria 6441
134 Ga0496125_0002329 3300048928 Bacteria 25018
135 Ga0501031_0002481 3300049568 Bacteria 11777
136 Ga0501031_0024405 3300049568 Bacteria 3941
137 Ga0501033_0000591 3300049570 Bacteria 33621
138 Ga0501033_0006570 3300049570 Bacteria 9095
139 Ga0501033_0045776 3300049570 Bacteria 3255
140 Ga0501034_0002149 3300049571 Bacteria 24475
141 Ga0501034_0017328 3300049571 Bacteria 7390
142 Ga0501034_0045651 3300049571 Bacteria 4426
143 Ga0501034_0072588 3300049571 Bacteria 3450
144 Ga0501036_0000728 3300049572 Bacteria 24326
145 Ga0501036_0032408 3300049572 Bacteria 4415
146 Ga0501036_0042839 3300049572 Bacteria 3832
147 Ga0501037_0002775 3300049573 Bacteria 12677
148 Ga0501037_0019010 3300049573 Bacteria 5064
149 Ga0501038_0012152 3300049574 Bacteria 7861
150 Ga0501038_0015903 3300049574 Bacteria 6836
151 Ga0501038_0019119 3300049574 Bacteria 6178
152 Ga0501039_0008103 3300049575 Bacteria 8004
153 Ga0501042_0016484 3300049578 Bacteria 5072
154 Ga0501043_0006589 3300049579 Bacteria 9307
155 Ga0501043_0014071 3300049579 Bacteria 6262
156 Ga0501048_0003154 3300049582 Bacteria 12568
157 Ga0501068_0003347 3300049584 Bacteria 8603
158 Ga0501070_0001439 3300049586 Bacteria 21297
159 Ga0501071_0000222 3300049587 Bacteria 26207
160 Ga0501074_0001766 3300049590 Bacteria 14768
161 Ga0501079_0009494 3300049741 Bacteria 7375
162 Ga0501083_0001852 3300049744 Bacteria 14511
163 Ga0501035_0002246 3300049822 Bacteria 19123
164 Ga0501035_0003234 3300049822 Bacteria 15607
165 Ga0501035_0016981 3300049822 Bacteria 6707
166 Ga0501044_0000886 3300049823 Bacteria 36088
167 Ga0501044_0001815 3300049823 Bacteria 24871
168 Ga0501044_0008940 3300049823 Bacteria 10948
169 Ga0501044_0042489 3300049823 Bacteria 4727
170 Ga0501044_0043088 3300049823 Bacteria 4690
171 nmdc:mga08y16_45900_c1 3300050511 Bacteria 4576
172 Ga0500616_0009405 3300053153 Bacteria 5947
173 Ga0500633_0000685 3300053160 Bacteria 5709
174 Ga0466962_0000590 3300061719 Bacteria 16000
175 Ga0530510_0009289 3300061734 Bacteria 6899
176 2793979412 2791355406 Bacteria 11364898
177 2554258861 2554235005 Bacteria 6457341
178 2585299748 2582581312 Bacteria 7308206
179 2585311484 2582581313 Bacteria 10042643
180 2585317947 2582581314 Bacteria 11452267
181 2616694404 2616644814 Bacteria 11555299
182 2616899544 2616644941 Bacteria 8510691
183 2643759419 2643221548 Bacteria 8053412
184 2643897492 2643221578 Bacteria 9213798
185 2643945035 2643221587 Bacteria 7586415
186 2644017846 2643221601 Bacteria 7493239
187 2644178098 2643221631 Bacteria 8168043
188 2644265417 2643221647 Bacteria 10741251
189 2644387267 2643221670 Bacteria 6497041
190 2644408636 2643221673 Bacteria 9196637
191 2644431934 2643221677 Bacteria 7584031
192 2644435907 2643221678 Bacteria 9540101
193 2644463165 2643221682 Bacteria 6743283
194 2644632220 2643221714 Bacteria 9015452
195 2768644402 2767802112 Bacteria 6465194
196 2784587514 2784132148 Bacteria 8627943
197 2785344831 2784746763 Bacteria 9783172
198 2785368059 2784746768 Bacteria 10036182
199 2786669109 2786546132 Bacteria 10419719
200 2793984250 2791355406 Bacteria 11364898
201 2804844537 2802429296 Bacteria 7227771
202 2808840713 2808606359 Bacteria 9866990
203 2808919310 2808606375 Bacteria 9466072
204 2809231072 2808606448 Bacteria 8656184
205 2811847722 2808606982 Bacteria 7791042
206 2812359470 2811994879 Bacteria 9313447
207 2812481604 2811994917 Bacteria 7761064
208 2819694005 2818991463 Bacteria 7948711
209 2819743160 2818991472 Bacteria 10089953
210 2852642892 2852635781 Bacteria 8251373
211 2862182822 2862178590 Bacteria 8583590
212 2862288548 2862281513 Bacteria 9621493
213 2862296985 2862290372 Bacteria 7471434
214 2862387694 2862382967 Bacteria 10317375
215 2862511417 2862507626 Bacteria 9425308
216 2862582780 2862574272 Bacteria 10567477
217 2862711078 2862705112 Bacteria 6563286
218 2863406063 2863404153 Bacteria 9672205
219 2867347465 2867346516 Bacteria 7608576
220 2867370743 2867369537 Bacteria 6501581
221 2867437183 2867428634 Bacteria 9590268
222 2867476137 2867475112 Bacteria 6909112
223 2873156909 2873151551 Bacteria 8625867
224 2875393438 2875391855 Bacteria 7600475
225 2877682483 2877676314 Bacteria 9512378
226 2904501028 2904497146 Bacteria 4731781
227 2904778013 2904776348 Bacteria 4658726
228 2912721515 2912715099 Bacteria 9460473
229 2912725375 2912723979 Bacteria 8557534
230 2912759639 2912757875 Bacteria 7940295
231 2918503342 2918501144 Bacteria 8668083
232 2919038818 2919034639 Bacteria 4763403
233 2919062869 2919059106 Bacteria 4991624
234 2919468265 2919468124 Bacteria 9133025
235 2932430480 2932426870 Bacteria 4547726
236 2935395777 2935390628 Bacteria 7043367
237 2939651056 2939647034 Bacteria 4681660
238 2939678901 2939674588 Bacteria 4844420
239 2946051257 2946045630 Bacteria 8527308
240 2946066449 2946064051 Bacteria 8957905
241 2946074699 2946072368 Bacteria 8999607
242 2947230926 2947224130 Bacteria 9938529
243 2954004218 2954002825 Bacteria 9173742
244 2954387686 2954380949 Bacteria 10050426
245 2954675408 2954673503 Bacteria 9685905
246 2954688724 2954682443 Bacteria 9862841
247 2954703726 2954701450 Bacteria 10834262
248 2954717472 2954711539 Bacteria 10867210
249 2954727435 2954721474 Bacteria 10456478
250 2954734365 2954731030 Bacteria 10243860
251 2954746331 2954740390 Bacteria 10229294
252 2954753248 2954749733 Bacteria 10366972
253 2954765444 2954759201 Bacteria 9358192
254 2966603625 2966598605 Bacteria 7676064
255 2990049499 2990044586 Bacteria 6603797
256 2990062546 2990059506 Bacteria 9321252
257 2997456142 2997451912 Bacteria 8492419
258 2997606477 2997600082 Bacteria 9896405
259 3006397751 3006393351 Bacteria 6615579
260 3006491534 3006486233 Bacteria 8157040
261 3006495656 3006493962 Bacteria 8825450
262 8008489421 8008485437 Bacteria 7198341
263 8008562229 8008558824 Bacteria 10610750
264 8008579955 8008574985 Bacteria 7815457
265 8023628603 8023623736 Bacteria 8593882
266 8025417126 8025413630 Bacteria 7014048
267 8025529003 8025524527 Bacteria 7197316
268 8025533644 8025530807 Bacteria 8495698
269 8047899493 8047893842 Bacteria 11723082
270 8047903297 8047893842 Bacteria 11723082
271 8048136123 8048127548 Bacteria 11053136
272 8048359436 8048356638 Bacteria 11044339
273 8048365889 8048356638 Bacteria 11044339
274 8048376441 8048369669 Bacteria 11666822
275 8048379263 8048369669 Bacteria 11666822
276 8048385495 8048379754 Bacteria 11877923
277 8048388369 8048379754 Bacteria 11877923
278 8048408930 8048406513 Bacteria 8936924
279 8054167672 8054160619 Bacteria 7783213
280 8056448634 8056447290 Bacteria 7680491
281 8056673564 8056667051 Bacteria 6953971
282 8056836558 8056829672 Bacteria 9045328
283 rootH1_10001683
284 Ga0006562J51391_1053560
285 Ga0006562J51391_1053561
286 Ga0070670_100025407
287 Ga0070669_100006090
288 Ga0070675_100044026
289 Ga0068853_100022879
290 Ga0075434_100023951
291 Ga0105246_10002102
292 Ga0182008_10002474
293 Ga0182007_10000440
294 Ga0183367_1009
295 Ga0213875_10005889
296 Ga0209758_1005862
297 Ga0207426_1002579
298 Ga0207426_1007725
299 Ga0209051_1008383
300 Ga0207647_10022236
301 Ga0207650_10008767
302 Ga0207691_10000972
303 Ga0207683_10005968
304 Ga0207428_10007887
305 Ga0307515_10016924
306 Ga0307511_10001658
307 Ga0307513_10007644
308 Ga0307508_10004511
309 Ga0307508_10014999
310 Ga0307508_10038335
311 Ga0307508_10058142
312 Ga0307514_10005781
313 Ga0307516_10012599
314 Ga0307405_10007056
315 Ga0307410_10010487
316 Ga0307412_10003040
317 Ga0307507_10009679
318 Ga0307510_10004861
319 Ga0373937_0001630
320 Ga0316582_0002535
321 Ga0316584_0027141
322 Ga0395899_0001405
323 Ga0395898_0005636
324 Ga0436364_1306559
325 Ga0439439_0005469
326 Ga0439447_007349
327 Ga0439466_0008450
328 Ga0451837_0803827
329 Ga0439432_004093
330 Ga0439449_0009022
331 Ga0439452_000892
332 Ga0439457_000471
333 Ga0439457_000983
334 Ga0439462_0003462
335 Ga0450919_000556
336 Ga0450894_000182
337 Ga0450899_000013
338 Ga0450903_001469
339 Ga0439434_0000448
340 Ga0466969_0004882
341 Ga0466966_0001382
342 Ga0466961_0001652
343 Ga0466963_0000121
344 Ga0466964_0004684
345 Ga0466971_0001956
346 Ga0466970_0000251
347 Ga0466970_0000404
348 Ga0466959_0001595
349 Ga0466967_0007123
350 Ga0495603_0000151
351 Ga0495603_0003106
352 Ga0495603_0017676
353 Ga0495629_0001223
354 Ga0495629_0001527
355 Ga0495629_0002261
356 Ga0495629_0028504
357 Ga0495629_0031948
358 Ga0495651_0042440
359 Ga0495580_0027771
360 Ga0495639_0004256
361 Ga0495662_0006717
362 Ga0495664_0006299
363 Ga0495585_0005498
364 Ga0495585_0020673
365 Ga0495594_0000274
366 Ga0495606_0012055
367 Ga0495616_0014068
368 Ga0495620_0009542
369 Ga0495643_0002315
370 Ga0495666_0003784
371 Ga0495640_0003185
372 Ga0495587_0015725
373 Ga0495645_0002905
374 Ga0495656_0000682
375 Ga0495634_0001882
376 Ga0495634_0007820
377 Ga0495611_0013546
378 Ga0495625_0009425
379 Ga0495635_0023060
380 Ga0495588_0016272
381 Ga0495657_0001465
382 Ga0495657_0007894
383 Ga0495657_0010491
384 Ga0495657_0016880
385 Ga0495657_0025660
386 Ga0495646_0000359
387 Ga0495613_0002352
388 Ga0495613_0003178
389 Ga0495670_0002876
390 Ga0495589_0008865
391 Ga0495600_0002946
392 Ga0495600_0012794
393 Ga0495604_0006554
394 Ga0495604_0013991
395 Ga0495604_0041356
396 Ga0495636_0000490
397 Ga0495636_0006321
398 Ga0495676_0001923
399 Ga0495676_0004646
400 Ga0495676_0005807
401 Ga0495676_0026563
402 Ga0495680_0014426
403 Ga0495687_001600
404 Ga0495687_002378
405 Ga0495687_010670
406 Ga0495675_0006778
407 Ga0495681_0004758
408 Ga0495684_0025445
409 Ga0495686_0006017
410 Ga0495614_0001593
411 Ga0495626_0008357
412 Ga0496101_0011864
413 Ga0496105_0015052
414 Ga0496109_0034318
415 Ga0496110_0015013
416 Ga0496125_0002329
417 Ga0501031_0002481
418 Ga0501031_0024405
419 Ga0501033_0000591
420 Ga0501033_0006570
421 Ga0501033_0045776
422 Ga0501034_0002149
423 Ga0501034_0017328
424 Ga0501034_0045651
425 Ga0501034_0072588
426 Ga0501036_0000728
427 Ga0501036_0032408
428 Ga0501036_0042839
429 Ga0501037_0002775
430 Ga0501037_0019010
431 Ga0501038_0012152
432 Ga0501038_0015903
433 Ga0501038_0019119
434 Ga0501039_0008103
435 Ga0501042_0016484
436 Ga0501043_0006589
437 Ga0501043_0014071
438 Ga0501048_0003154
439 Ga0501068_0003347
440 Ga0501070_0001439
441 Ga0501071_0000222
442 Ga0501074_0001766
443 Ga0501079_0009494
444 Ga0501083_0001852
445 Ga0501035_0002246
446 Ga0501035_0003234
447 Ga0501035_0016981
448 Ga0501044_0000886
449 Ga0501044_0001815
450 Ga0501044_0008940
451 Ga0501044_0042489
452 Ga0501044_0043088
453 nmdc:mga08y16_45900_c1
454 Ga0500616_0009405
455 Ga0500633_0000685
456 Ga0466962_0000590
457 Ga0530510_0009289
458 2793979412
459 2554258861
460 2585299748
461 2585311484
462 2585317947
463 2616694404
464 2616899544
465 2643759419
466 2643897492
467 2643945035
468 2644017846
469 2644178098
470 2644265417
471 2644387267
472 2644408636
473 2644431934
474 2644435907
475 2644463165
476 2644632220
477 2768644402
478 2784587514
479 2785344831
480 2785368059
481 2786669109
482 2793984250
483 2804844537
484 2808840713
485 2808919310
486 2809231072
487 2811847722
488 2812359470
489 2812481604
490 2819694005
491 2819743160
492 2852642892
493 2862182822
494 2862288548
495 2862296985
496 2862387694
497 2862511417
498 2862582780
499 2862711078
500 2863406063
501 2867347465
502 2867370743
503 2867437183
504 2867476137
505 2873156909
506 2875393438
507 2877682483
508 2904501028
509 2904778013
510 2912721515
511 2912725375
512 2912759639
513 2918503342
514 2919038818
515 2919062869
516 2919468265
517 2932430480
518 2935395777
519 2939651056
520 2939678901
521 2946051257
522 2946066449
523 2946074699
524 2947230926
525 2954004218
526 2954387686
527 2954675408
528 2954688724
529 2954703726
530 2954717472
531 2954727435
532 2954734365
533 2954746331
534 2954753248
535 2954765444
536 2966603625
537 2990049499
538 2990062546
539 2997456142
540 2997606477
541 3006397751
542 3006491534
543 3006495656
544 8008489421
545 8008562229
546 8008579955
547 8023628603
548 8025417126
549 8025529003
550 8025533644
551 8047899493
552 8047903297
553 8048136123
554 8048359436
555 8048365889
556 8048376441
557 8048379263
558 8048385495
559 8048388369
560 8048408930
561 8054167672
562 8056448634
563 8056673564
564 8056836558

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

94

356

0.93

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

931

1074

0.91

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

351

501

0.88

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

755

911

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8406 55 475
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8231 55 475
3k7d-assembly3.cif.gz_B c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.742 477 992
3k7d-assembly3.cif.gz_B c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.7327 477 992
3k7d-assembly3.cif.gz_A c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.7084 477 993
ID Description Score Start End Superfamily
af_P9WN27_328_485_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9732 327 477 1.20.120.330
af_P9WN27_840_994_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9591 840 993 1.20.120.330
af_P9WN27_840_994_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9471 840 993 1.20.120.330
af_P9WN27_328_485_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9251 327 477 1.20.120.330
af_P9WN27_598_833_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9187 593 831 3.30.460.10
ID Description Score Start End GO Terms
AF-H1Q8F5-F1-model_v4 deleted 0.9993 651 993
AF-A0A7K2N1A9-F1-model_v4 Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 0.9967 839 993 GO:0000820
GO:0005829
GO:0008882
AF-A0A6B2SAN0-F1-model_v4 Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 0.9964 646 995 GO:0000820
GO:0005524
GO:0005829
GO:0008882
AF-A0A6G2XY41-F1-model_v4 deleted 0.9941 680 995
AF-D6KBZ2-F1-model_v4 Glutamate-ammonia-ligase adenylyltransferase 0.9915 1 469 GO:0000820
GO:0005524
GO:0005829
GO:0008882
GO:0016874

Map