F384930

General Info

Members Datasets Scaffolds Average Seq Length
282 167 564 260

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_10176569|Ga0163162_101765693
Length 277
Sequence LDAEFRAEVRSAEARNDNLTTFIDSHAHLADPAFDPDRDAVIERALGDGARAMICIGESLDAAARAATIAGARPGIVFSTAGVHPHDAAGFDAAGDVEAIREFIARGAVAIGECGLDSHYDHSPRDFQRRAFAAQLALALEVRRPVVVHTREAEADTRAMVVEAASAGVRGVLHCYTGSHALAEAALAVGWYISFSGIITFKKWTDDALIRLVPEDRLLVESDAPYLAPVPNRGKRNEPAWVRRTLERVAQVRGVDASALGAQTADNAIRLFALPLA

Samples

Sample ID Description Type Environment
1 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
84 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
94 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
96 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
97 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
98 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
99 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
105 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
111 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
112 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
113 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
114 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
115 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
121 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
122 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
123 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
131 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
134 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
138 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
139 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
150 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
151 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
152 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
163 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
164 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
165 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
166 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
167 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.71
Rhizosphere 98.94
Stem 0
Stem Tuber 0
Unclassified 4.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163162_10176569 3300013306 Bacteria 2262
2 Ga0070658_10003979 3300005327 Bacteria 12111
3 Ga0070658_10132531 3300005327 Bacteria 2077
4 Ga0070683_100010597 3300005329 Bacteria 7925
5 Ga0070683_100042142 3300005329 Bacteria 4203
6 Ga0070683_100096407 3300005329 Bacteria 2782
7 Ga0070683_100136043 3300005329 Bacteria 2327
8 Ga0070683_100575602 3300005329 Bacteria 1077
9 Ga0070670_100166037 3300005331 Bacteria 1914
10 Ga0070680_100000087 3300005336 Bacteria 51648
11 Ga0070680_100216576 3300005336 Bacteria 1616
12 Ga0068868_100088623 3300005338 Bacteria 2490
13 Ga0070660_100037742 3300005339 Bacteria 3663
14 Ga0070691_10084037 3300005341 Bacteria 1562
15 Ga0070668_100036889 3300005347 Bacteria 3731
16 Ga0070669_100043771 3300005353 Bacteria 3262
17 Ga0070675_100031536 3300005354 Bacteria 4285
18 Ga0070671_100030796 3300005355 Bacteria 4428
19 Ga0070674_100190430 3300005356 Bacteria 1578
20 Ga0070674_100298176 3300005356 Bacteria 1284
21 Ga0070659_100049159 3300005366 Bacteria 3315
22 Ga0070714_100054581 3300005435 Bacteria 3413
23 Ga0070713_100002378 3300005436 Bacteria 12258
24 Ga0070713_100012725 3300005436 Bacteria 6182
25 Ga0070700_100054503 3300005441 Bacteria 2499
26 Ga0070662_100160578 3300005457 Bacteria 1758
27 Ga0070662_100225443 3300005457 Bacteria 1497
28 Ga0070681_10006963 3300005458 Bacteria 11001
29 Ga0070681_10114499 3300005458 Bacteria 2635
30 Ga0070681_10126893 3300005458 Unclassified 2484
31 Ga0070681_10636248 3300005458 Bacteria 981
32 Ga0070699_100092724 3300005518 Bacteria 2642
33 Ga0070679_100011105 3300005530 Bacteria 8572
34 Ga0070679_100024442 3300005530 Bacteria 5920
35 Ga0070679_100027725 3300005530 Bacteria 5578
36 Ga0070679_100030359 3300005530 Bacteria 5337
37 Ga0070679_100078002 3300005530 Bacteria 3302
38 Ga0070679_100099129 3300005530 Bacteria 2901
39 Ga0070679_100120322 3300005530 Bacteria 2610
40 Ga0070684_100020282 3300005535 Bacteria 5513
41 Ga0070684_100034916 3300005535 Bacteria 4302
42 Ga0070684_100186193 3300005535 Bacteria 1888
43 Ga0070684_100214509 3300005535 Bacteria 1755
44 Ga0070684_100314068 3300005535 Unclassified 1439
45 Ga0070672_100003297 3300005543 Bacteria 10451
46 Ga0070672_100083499 3300005543 Bacteria 2564
47 Ga0070672_100373260 3300005543 Bacteria 1219
48 Ga0068855_100003245 3300005563 Bacteria 19889
49 Ga0068855_100153541 3300005563 Bacteria 2617
50 Ga0070664_100056004 3300005564 Bacteria 3350
51 Ga0070664_100291257 3300005564 Bacteria 1474
52 Ga0068857_100029701 3300005577 Bacteria 4825
53 Ga0068852_100048925 3300005616 Bacteria 3614
54 Ga0068864_100105138 3300005618 Bacteria 2509
55 Ga0068864_100219926 3300005618 Bacteria 1752
56 Ga0068863_100334246 3300005841 Bacteria 1473
57 Ga0068862_100000608 3300005844 Bacteria 37205
58 Ga0068862_100286839 3300005844 Bacteria 1510
59 Ga0070717_10086184 3300006028 Bacteria 2643
60 Ga0075428_100161751 3300006844 Bacteria 2430
61 Ga0075430_100000314 3300006846 Bacteria 34482
62 Ga0075430_100054480 3300006846 Bacteria 3365
63 Ga0075431_100075946 3300006847 Bacteria 3468
64 Ga0075431_100105135 3300006847 Bacteria 2913
65 Ga0075431_100122628 3300006847 Bacteria 2682
66 Ga0075431_100350204 3300006847 Bacteria 1485
67 Ga0075433_10032579 3300006852 Bacteria 4464
68 Ga0075434_100154551 3300006871 Bacteria 2314
69 Ga0105240_10077641 3300009093 Bacteria 4091
70 Ga0111539_10314325 3300009094 Bacteria 1823
71 Ga0105245_10389874 3300009098 Unclassified 1389
72 Ga0114129_10023493 3300009147 Bacteria 8740
73 Ga0114129_10238304 3300009147 Bacteria 2447
74 Ga0105241_10000483 3300009174 Bacteria 30099
75 Ga0105242_10121754 3300009176 Bacteria 2240
76 Ga0105248_10069325 3300009177 Bacteria 3959
77 Ga0105249_10000208 3300009553 Bacteria 67107
78 Ga0157373_10061300 3300013100 Bacteria 2664
79 Ga0157370_10088128 3300013104 Bacteria 2914
80 Ga0157372_10017582 3300013307 Bacteria 7673
81 Ga0157375_10039342 3300013308 Bacteria 4551
82 Ga0157375_10348789 3300013308 Bacteria 1646
83 Ga0157375_10441785 3300013308 Bacteria 1467
84 Ga0157380_10028800 3300014326 Bacteria 4239
85 Ga0157376_10105578 3300014969 Bacteria 2470
86 Ga0207645_10162629 3300025907 Unclassified 1461
87 Ga0207643_10011337 3300025908 Bacteria 4813
88 Ga0207707_10093738 3300025912 Bacteria 2623
89 Ga0207707_10214923 3300025912 Bacteria 1674
90 Ga0207707_10305546 3300025912 Bacteria 1375
91 Ga0207695_10001201 3300025913 Bacteria 44516
92 Ga0207695_10013798 3300025913 Bacteria 9613
93 Ga0207660_10000130 3300025917 Bacteria 44299
94 Ga0207660_10615300 3300025917 Bacteria 885
95 Ga0207657_10045481 3300025919 Bacteria 3852
96 Ga0207649_10211386 3300025920 Bacteria 1376
97 Ga0207652_10005635 3300025921 Bacteria 10161
98 Ga0207652_10010230 3300025921 Bacteria 7549
99 Ga0207652_10018463 3300025921 Bacteria 5722
100 Ga0207652_10026073 3300025921 Bacteria 4865
101 Ga0207652_10093886 3300025921 Bacteria 2641
102 Ga0207652_10106047 3300025921 Bacteria 2487
103 Ga0207652_10321742 3300025921 Bacteria 1396
104 Ga0207687_10068653 3300025927 Bacteria 2525
105 Ga0207700_10001765 3300025928 Bacteria 12257
106 Ga0207700_10050237 3300025928 Bacteria 3107
107 Ga0207664_10014215 3300025929 Bacteria 5740
108 Ga0207664_10037010 3300025929 Bacteria 3774
109 Ga0207690_10033412 3300025932 Bacteria 3308
110 Ga0207706_10181943 3300025933 Bacteria 1846
111 Ga0207706_10188587 3300025933 Bacteria 1810
112 Ga0207669_10064060 3300025937 Bacteria 2273
113 Ga0207704_10200952 3300025938 Unclassified 1459
114 Ga0207704_10216016 3300025938 Unclassified 1415
115 Ga0207691_10058938 3300025940 Bacteria 3492
116 Ga0207691_10324020 3300025940 Bacteria 1321
117 Ga0207691_10502444 3300025940 Bacteria 1030
118 Ga0207661_10020762 3300025944 Bacteria 4914
119 Ga0207661_10038564 3300025944 Bacteria 3746
120 Ga0207661_10067995 3300025944 Bacteria 2899
121 Ga0207661_10125818 3300025944 Bacteria 2189
122 Ga0207661_10317080 3300025944 Archaea 1401
123 Ga0207679_10266971 3300025945 Bacteria 1462
124 Ga0207667_10253670 3300025949 Bacteria 1800
125 Ga0207712_10000290 3300025961 Bacteria 47611
126 Ga0207668_10008333 3300025972 Bacteria 6172
127 Ga0207677_10165660 3300026023 Unclassified 1722
128 Ga0207703_10466356 3300026035 Bacteria 1182
129 Ga0207708_10058870 3300026075 Bacteria 2932
130 Ga0207676_10116761 3300026095 Bacteria 2243
131 Ga0207674_10015688 3300026116 Bacteria 8314
132 Ga0207674_10039565 3300026116 Bacteria 4887
133 Ga0207674_10352694 3300026116 Bacteria 1422
134 Ga0207683_10128139 3300026121 Bacteria 2282
135 Ga0207683_10615310 3300026121 Bacteria 1006
136 Ga0207698_10071434 3300026142 Bacteria 2754
137 Ga0268265_10004153 3300028380 Bacteria 10148
138 Ga0265340_10037068 3300031247 Bacteria 2416
139 Ga0307408_100032504 3300031548 Bacteria 3639
140 Ga0265314_10006461 3300031711 Bacteria 10375
141 Ga0265342_10212000 3300031712 Bacteria 1047
142 Ga0307405_10406023 3300031731 Bacteria 1068
143 Ga0307413_10001830 3300031824 Bacteria 8361
144 Ga0307413_10031440 3300031824 Bacteria 2996
145 Ga0307410_10000047 3300031852 Bacteria 42459
146 Ga0307410_10002921 3300031852 Bacteria 8423
147 Ga0307410_10389590 3300031852 Bacteria 1123
148 Ga0307406_10033624 3300031901 Bacteria 3140
149 Ga0307406_10094573 3300031901 Bacteria 2020
150 Ga0307409_100038036 3300031995 Bacteria 3554
151 Ga0307409_100251551 3300031995 Bacteria 1616
152 Ga0307416_100001125 3300032002 Bacteria 14375
153 Ga0307416_100011244 3300032002 Bacteria 5952
154 Ga0307416_100070418 3300032002 Bacteria 2900
155 Ga0307416_100096552 3300032002 Bacteria 2556
156 Ga0307416_100117671 3300032002 Bacteria 2360
157 Ga0307416_100283569 3300032002 Bacteria 1635
158 Ga0307416_100360466 3300032002 Bacteria 1476
159 Ga0307414_10002405 3300032004 Bacteria 9797
160 Ga0307414_10060287 3300032004 Bacteria 2683
161 Ga0307414_10074036 3300032004 Bacteria 2466
162 Ga0307411_10000166 3300032005 Bacteria 21267
163 Ga0307411_10052349 3300032005 Bacteria 2669
164 Ga0307411_10162958 3300032005 Bacteria 1673
165 Ga0307415_100001264 3300032126 Bacteria 11891
166 Ga0307415_100675387 3300032126 Bacteria 929
167 Ga0373934_0001323 3300035086 Bacteria 9045
168 Ga0373934_0002430 3300035086 Bacteria 6852
169 Ga0373923_0004311 3300035111 Bacteria 4709
170 Ga0373923_0074766 3300035111 Bacteria 1461
171 Ga0373953_0005429 3300035117 Bacteria 4136
172 Ga0373954_0015468 3300035118 Bacteria 3411
173 Ga0373954_0099544 3300035118 Unclassified 1401
174 Ga0373955_0005431 3300035172 Bacteria 5727
175 Ga0373955_0033549 3300035172 Bacteria 2704
176 Ga0373927_0092601 3300035695 Bacteria 1963
177 Ga0373933_0000727 3300035724 Bacteria 20200
178 Ga0373933_0074484 3300035724 Bacteria 2071
179 Ga0373937_0004152 3300036401 Bacteria 12285
180 Ga0373937_0012650 3300036401 Bacteria 7428
181 Ga0373937_0726275 3300036401 Unclassified 940
182 Ga0395898_0303627 3300037466 Bacteria 1522
183 Ga0436365_1812169 3300039437 Bacteria 3239
184 Ga0451577_0046044 3300042876 Bacteria 3903
185 Ga0466963_0158996 3300044694 Bacteria 1572
186 Ga0453684_0216061 3300044712 Bacteria 2224
187 Ga0451576_0063862 3300045051 Bacteria 3837
188 Ga0466967_0166948 3300045976 Bacteria 2069
189 Ga0466967_0359667 3300045976 Bacteria 1410
190 Ga0495651_0005886 3300046462 Bacteria 9354
191 Ga0495651_0010466 3300046462 Bacteria 7127
192 Ga0495653_0003474 3300046463 Bacteria 12663
193 Ga0495580_0034104 3300046472 Bacteria 3665
194 Ga0495580_0157194 3300046472 Bacteria 1574
195 Ga0495582_0222301 3300046473 Bacteria 1081
196 Ga0495639_0119986 3300046475 Unclassified 1254
197 Ga0495662_0083872 3300046476 Bacteria 1551
198 Ga0495662_0102579 3300046476 Bacteria 1400
199 Ga0495664_0102762 3300046477 Unclassified 1722
200 Ga0495594_0007944 3300046499 Bacteria 5456
201 Ga0495594_0046871 3300046499 Bacteria 2374
202 Ga0495608_0000277 3300046511 Bacteria 36499
203 Ga0495618_0100395 3300046514 Bacteria 1852
204 Ga0495628_0004362 3300046516 Bacteria 12548
205 Ga0495630_0174102 3300046517 Bacteria 1640
206 Ga0495666_0027780 3300046526 Bacteria 2785
207 Ga0495652_0002422 3300046529 Bacteria 19233
208 Ga0495665_0002520 3300046531 Bacteria 9895
209 Ga0495587_0000741 3300046536 Bacteria 21806
210 Ga0495587_0002656 3300046536 Bacteria 11943
211 Ga0495587_0113122 3300046536 Unclassified 1558
212 Ga0495587_0137054 3300046536 Bacteria 1398
213 Ga0495645_0006146 3300046543 Bacteria 8311
214 Ga0495645_0055690 3300046543 Bacteria 2871
215 Ga0495667_0005681 3300046559 Bacteria 8441
216 Ga0495667_0013920 3300046559 Bacteria 5432
217 Ga0495634_0046119 3300046642 Bacteria 2943
218 Ga0495634_0067496 3300046642 Bacteria 2366
219 Ga0495635_0000621 3300046663 Bacteria 22813
220 Ga0495635_0150683 3300046663 Bacteria 1583
221 Ga0495657_0002423 3300046675 Bacteria 15722
222 Ga0495599_0000543 3300046678 Bacteria 21650
223 Ga0495599_0002701 3300046678 Bacteria 10361
224 Ga0495599_0073996 3300046678 Bacteria 2127
225 Ga0495623_0000896 3300046679 Bacteria 20182
226 Ga0495623_0010132 3300046679 Bacteria 6100
227 Ga0495646_0072333 3300046680 Bacteria 2028
228 Ga0495646_0094605 3300046680 Bacteria 1720
229 Ga0495613_0044165 3300046689 Bacteria 3297
230 Ga0495613_0081146 3300046689 Bacteria 2357
231 Ga0495600_0000011 3300046809 Bacteria 141462
232 Ga0495581_0016772 3300047315 Bacteria 4257
233 Ga0495604_0001331 3300047317 Bacteria 20196
234 Ga0495604_0003082 3300047317 Bacteria 13331
235 Ga0495604_0053813 3300047317 Bacteria 3109
236 Ga0495674_0004453 3300047319 Bacteria 13474
237 Ga0495674_0096516 3300047319 Bacteria 2519
238 Ga0495680_0010118 3300047322 Bacteria 8432
239 Ga0495675_0023355 3300047444 Bacteria 3939
240 Ga0495675_0027112 3300047444 Bacteria 3651
241 Ga0495675_0055073 3300047444 Bacteria 2523
242 Ga0495675_0204097 3300047444 Bacteria 1202
243 Ga0495685_017545 3300047447 Bacteria 2452
244 Ga0495684_0001702 3300047471 Bacteria 17687
245 Ga0495684_0042865 3300047471 Bacteria 3465
246 Ga0495684_0216404 3300047471 Bacteria 1406
247 Ga0495602_0002778 3300048088 Bacteria 17891
248 Ga0495602_0014778 3300048088 Bacteria 7910
249 Ga0496115_0027798 3300048918 Bacteria 4428
250 Ga0496115_0193105 3300048918 Bacteria 1682
251 Ga0501033_0023985 3300049570 Bacteria 4602
252 Ga0501033_0178140 3300049570 Bacteria 1525
253 Ga0501034_0105764 3300049571 Bacteria 2807
254 Ga0501036_0005247 3300049572 Bacteria 10484
255 Ga0501038_0187763 3300049574 Bacteria 1665
256 Ga0501047_0193854 3300049581 Bacteria 1895
257 Ga0501048_0449649 3300049582 Unclassified 923
258 Ga0501075_0174765 3300049591 Bacteria 1639
259 Ga0501233_000747 3300049668 Bacteria 5404
260 Ga0501242_004507 3300049674 Bacteria 1547
261 Ga0501247_015018 3300049677 Unclassified 964
262 Ga0501079_0314630 3300049741 Bacteria 1225
263 Ga0501268_001947 3300049765 Bacteria 2646
264 Ga0501035_0051938 3300049822 Bacteria 3668
265 Ga0501044_0009553 3300049823 Bacteria 10560
266 nmdc:mga05p37_172153_c1 3300050507 Bacteria 2640
267 nmdc:mga05p37_53531_c1 3300050507 Bacteria 4963
268 nmdc:mga0qj67_5585_c1 3300050509 Bacteria 9188
269 nmdc:mga06r32_19052_c1 3300050510 Bacteria 6292
270 nmdc:mga06r32_43150_c1 3300050510 Bacteria 4290
271 nmdc:mga06r32_639248_c1 3300050510 Bacteria 1033
272 nmdc:mga08y16_161413_c1 3300050511 Bacteria 2329
273 nmdc:mga08y16_210174_c1 3300050511 Bacteria 2015
274 nmdc:mga0n895_151004_c1 3300050512 Bacteria 2353
275 nmdc:mga0n895_6791_c1 3300050512 Bacteria 9766
276 nmdc:mga0a205_106150_c1 3300050515 Bacteria 2707
277 Ga0495601_0011095 3300053077 Bacteria 5385
278 Ga0495601_0069327 3300053077 Bacteria 2249
279 Ga0495612_0000960 3300053078 Bacteria 11842
280 Ga0495595_0023789 3300053084 Bacteria 2701
281 Ga0495619_0001459 3300053085 Bacteria 15589
282 Ga0590075_038650 3300059424 Bacteria 1218
283 Ga0163162_10176569
284 Ga0070658_10003979
285 Ga0070658_10132531
286 Ga0070683_100010597
287 Ga0070683_100042142
288 Ga0070683_100096407
289 Ga0070683_100136043
290 Ga0070683_100575602
291 Ga0070670_100166037
292 Ga0070680_100000087
293 Ga0070680_100216576
294 Ga0068868_100088623
295 Ga0070660_100037742
296 Ga0070691_10084037
297 Ga0070668_100036889
298 Ga0070669_100043771
299 Ga0070675_100031536
300 Ga0070671_100030796
301 Ga0070674_100190430
302 Ga0070674_100298176
303 Ga0070659_100049159
304 Ga0070714_100054581
305 Ga0070713_100002378
306 Ga0070713_100012725
307 Ga0070700_100054503
308 Ga0070662_100160578
309 Ga0070662_100225443
310 Ga0070681_10006963
311 Ga0070681_10114499
312 Ga0070681_10126893
313 Ga0070681_10636248
314 Ga0070699_100092724
315 Ga0070679_100011105
316 Ga0070679_100024442
317 Ga0070679_100027725
318 Ga0070679_100030359
319 Ga0070679_100078002
320 Ga0070679_100099129
321 Ga0070679_100120322
322 Ga0070684_100020282
323 Ga0070684_100034916
324 Ga0070684_100186193
325 Ga0070684_100214509
326 Ga0070684_100314068
327 Ga0070672_100003297
328 Ga0070672_100083499
329 Ga0070672_100373260
330 Ga0068855_100003245
331 Ga0068855_100153541
332 Ga0070664_100056004
333 Ga0070664_100291257
334 Ga0068857_100029701
335 Ga0068852_100048925
336 Ga0068864_100105138
337 Ga0068864_100219926
338 Ga0068863_100334246
339 Ga0068862_100000608
340 Ga0068862_100286839
341 Ga0070717_10086184
342 Ga0075428_100161751
343 Ga0075430_100000314
344 Ga0075430_100054480
345 Ga0075431_100075946
346 Ga0075431_100105135
347 Ga0075431_100122628
348 Ga0075431_100350204
349 Ga0075433_10032579
350 Ga0075434_100154551
351 Ga0105240_10077641
352 Ga0111539_10314325
353 Ga0105245_10389874
354 Ga0114129_10023493
355 Ga0114129_10238304
356 Ga0105241_10000483
357 Ga0105242_10121754
358 Ga0105248_10069325
359 Ga0105249_10000208
360 Ga0157373_10061300
361 Ga0157370_10088128
362 Ga0157372_10017582
363 Ga0157375_10039342
364 Ga0157375_10348789
365 Ga0157375_10441785
366 Ga0157380_10028800
367 Ga0157376_10105578
368 Ga0207645_10162629
369 Ga0207643_10011337
370 Ga0207707_10093738
371 Ga0207707_10214923
372 Ga0207707_10305546
373 Ga0207695_10001201
374 Ga0207695_10013798
375 Ga0207660_10000130
376 Ga0207660_10615300
377 Ga0207657_10045481
378 Ga0207649_10211386
379 Ga0207652_10005635
380 Ga0207652_10010230
381 Ga0207652_10018463
382 Ga0207652_10026073
383 Ga0207652_10093886
384 Ga0207652_10106047
385 Ga0207652_10321742
386 Ga0207687_10068653
387 Ga0207700_10001765
388 Ga0207700_10050237
389 Ga0207664_10014215
390 Ga0207664_10037010
391 Ga0207690_10033412
392 Ga0207706_10181943
393 Ga0207706_10188587
394 Ga0207669_10064060
395 Ga0207704_10200952
396 Ga0207704_10216016
397 Ga0207691_10058938
398 Ga0207691_10324020
399 Ga0207691_10502444
400 Ga0207661_10020762
401 Ga0207661_10038564
402 Ga0207661_10067995
403 Ga0207661_10125818
404 Ga0207661_10317080
405 Ga0207679_10266971
406 Ga0207667_10253670
407 Ga0207712_10000290
408 Ga0207668_10008333
409 Ga0207677_10165660
410 Ga0207703_10466356
411 Ga0207708_10058870
412 Ga0207676_10116761
413 Ga0207674_10015688
414 Ga0207674_10039565
415 Ga0207674_10352694
416 Ga0207683_10128139
417 Ga0207683_10615310
418 Ga0207698_10071434
419 Ga0268265_10004153
420 Ga0265340_10037068
421 Ga0307408_100032504
422 Ga0265314_10006461
423 Ga0265342_10212000
424 Ga0307405_10406023
425 Ga0307413_10001830
426 Ga0307413_10031440
427 Ga0307410_10000047
428 Ga0307410_10002921
429 Ga0307410_10389590
430 Ga0307406_10033624
431 Ga0307406_10094573
432 Ga0307409_100038036
433 Ga0307409_100251551
434 Ga0307416_100001125
435 Ga0307416_100011244
436 Ga0307416_100070418
437 Ga0307416_100096552
438 Ga0307416_100117671
439 Ga0307416_100283569
440 Ga0307416_100360466
441 Ga0307414_10002405
442 Ga0307414_10060287
443 Ga0307414_10074036
444 Ga0307411_10000166
445 Ga0307411_10052349
446 Ga0307411_10162958
447 Ga0307415_100001264
448 Ga0307415_100675387
449 Ga0373934_0001323
450 Ga0373934_0002430
451 Ga0373923_0004311
452 Ga0373923_0074766
453 Ga0373953_0005429
454 Ga0373954_0015468
455 Ga0373954_0099544
456 Ga0373955_0005431
457 Ga0373955_0033549
458 Ga0373927_0092601
459 Ga0373933_0000727
460 Ga0373933_0074484
461 Ga0373937_0004152
462 Ga0373937_0012650
463 Ga0373937_0726275
464 Ga0395898_0303627
465 Ga0436365_1812169
466 Ga0451577_0046044
467 Ga0466963_0158996
468 Ga0453684_0216061
469 Ga0451576_0063862
470 Ga0466967_0166948
471 Ga0466967_0359667
472 Ga0495651_0005886
473 Ga0495651_0010466
474 Ga0495653_0003474
475 Ga0495580_0034104
476 Ga0495580_0157194
477 Ga0495582_0222301
478 Ga0495639_0119986
479 Ga0495662_0083872
480 Ga0495662_0102579
481 Ga0495664_0102762
482 Ga0495594_0007944
483 Ga0495594_0046871
484 Ga0495608_0000277
485 Ga0495618_0100395
486 Ga0495628_0004362
487 Ga0495630_0174102
488 Ga0495666_0027780
489 Ga0495652_0002422
490 Ga0495665_0002520
491 Ga0495587_0000741
492 Ga0495587_0002656
493 Ga0495587_0113122
494 Ga0495587_0137054
495 Ga0495645_0006146
496 Ga0495645_0055690
497 Ga0495667_0005681
498 Ga0495667_0013920
499 Ga0495634_0046119
500 Ga0495634_0067496
501 Ga0495635_0000621
502 Ga0495635_0150683
503 Ga0495657_0002423
504 Ga0495599_0000543
505 Ga0495599_0002701
506 Ga0495599_0073996
507 Ga0495623_0000896
508 Ga0495623_0010132
509 Ga0495646_0072333
510 Ga0495646_0094605
511 Ga0495613_0044165
512 Ga0495613_0081146
513 Ga0495600_0000011
514 Ga0495581_0016772
515 Ga0495604_0001331
516 Ga0495604_0003082
517 Ga0495604_0053813
518 Ga0495674_0004453
519 Ga0495674_0096516
520 Ga0495680_0010118
521 Ga0495675_0023355
522 Ga0495675_0027112
523 Ga0495675_0055073
524 Ga0495675_0204097
525 Ga0495685_017545
526 Ga0495684_0001702
527 Ga0495684_0042865
528 Ga0495684_0216404
529 Ga0495602_0002778
530 Ga0495602_0014778
531 Ga0496115_0027798
532 Ga0496115_0193105
533 Ga0501033_0023985
534 Ga0501033_0178140
535 Ga0501034_0105764
536 Ga0501036_0005247
537 Ga0501038_0187763
538 Ga0501047_0193854
539 Ga0501048_0449649
540 Ga0501075_0174765
541 Ga0501233_000747
542 Ga0501242_004507
543 Ga0501247_015018
544 Ga0501079_0314630
545 Ga0501268_001947
546 Ga0501035_0051938
547 Ga0501044_0009553
548 nmdc:mga05p37_172153_c1
549 nmdc:mga05p37_53531_c1
550 nmdc:mga0qj67_5585_c1
551 nmdc:mga06r32_19052_c1
552 nmdc:mga06r32_43150_c1
553 nmdc:mga06r32_639248_c1
554 nmdc:mga08y16_161413_c1
555 nmdc:mga08y16_210174_c1
556 nmdc:mga0n895_151004_c1
557 nmdc:mga0n895_6791_c1
558 nmdc:mga0a205_106150_c1
559 Ga0495601_0011095
560 Ga0495601_0069327
561 Ga0495612_0000960
562 Ga0495595_0023789
563 Ga0495619_0001459
564 Ga0590075_038650

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01026

TatD_DNase

TatD related DNase

23

273

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rcm-assembly1.cif.gz_A crystal structure of efi target 500140:tatd family hydrolase from pseudomonas putida 0.8831 10 231
2xio-assembly1.cif.gz_A structure of putative deoxyribonuclease tatdn1 isoform a 0.8727 21 225
1xwy-assembly1.cif.gz_A crystal structure of tatd deoxyribonuclease from escherichia coli k12 at 2.0 a resolution 0.8686 17 228
1yix-assembly2.cif.gz_B crystal structure of ycfh, tatd homolog from escherichia coli k12, at 1.9 a resolution 0.8636 10 227
8efg-assembly1.cif.gz_A crystal structure of human tatdn1 bound to damp and two zinc ions 0.8544 10 226
ID Description Score Start End Superfamily
af_Q54YD3_63_332_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.884 10 225 3.20.20.140
3rcmA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8786 10 231 3.20.20.140
af_Q6P1N9_1_296_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8763 21 225 3.20.20.140
af_G5EG18_4_286_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8751 10 228 3.20.20.140
af_P0AFQ7_2_265_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8697 10 228 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A524IHM2-F1-model_v4 TatD family deoxyribonuclease 0.9181 36 228 GO:0005829
GO:0016788
AF-A0A832GHQ3-F1-model_v4 TatD family deoxyribonuclease 0.9178 17 230 GO:0004536
GO:0005829
GO:0016020
GO:0046872
AF-A0A7W1HCZ3-F1-model_v4 TatD family hydrolase 0.9156 83 231 GO:0005829
GO:0016788
AF-A0A524IHM2-F1-model_v4 TatD family deoxyribonuclease 0.9136 36 228 GO:0005829
GO:0016788
AF-A0A640XNA5-F1-model_v4 UPF0102 protein EDM70_09385 0.9102 21 227 GO:0003676
GO:0004536
GO:0005829
GO:0046872
GO:0051536

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